LOC100130009 21519

Name: LOC100130009	Sequence: fasta or formatted (104aa)		NCBI GI: 239753198
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {104aa} PREDICTED: hypothetical protein alt mRNA {104aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 3 2 C cysteine 0.0 0 0 D aspartate 1.0 1 1 E glutamate 10.6 11 3 F phenylalanine 0.0 0 0 G glycine 11.5 12 1 H histidine 0.0 0 0 I isoleucine 1.0 1 1 K lysine 17.3 18 2 L leucine 6.7 7 1 M methionine 1.0 1 1 N asparagine 1.0 1 1 P proline 10.6 11 2 Q glutamine 5.8 6 1 R arginine 9.6 10 1 S serine 12.5 13 3 T threonine 7.7 8 4 V valine 1.0 1 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100130009 1.000 PREDICTED: hypothetical protein LOC100130009 1.000 PREDICTED: hypothetical protein HMGA1 0.837 high mobility group AT-hook 1 isoform b HMGA1 0.837 high mobility group AT-hook 1 isoform b HMGA1 0.837 high mobility group AT-hook 1 isoform b HMGA1 0.837 high mobility group AT-hook 1 isoform b HMGA1 0.788 high mobility group AT-hook 1 isoform a HMGA1 0.788 high mobility group AT-hook 1 isoform a HMGA2 0.277 high mobility group AT-hook 2 isoform a HMGA2 0.255 high mobility group AT-hook 2 isoform b REXO1 0.109 transcription elongation factor B polypeptide 3 bin... CTDP1 0.076 CTD (carboxy-terminal domain, RNA polymerase II, pol... ACIN1 0.065 apoptotic chromatin condensation inducer 1 LOC100133599 0.065 PREDICTED: hypothetical protein FAM47A 0.065 hypothetical protein LOC158724 THOC2 0.060 THO complex 2 LOC100287063 0.060 PREDICTED: hypothetical protein LOC100287063 0.060 PREDICTED: hypothetical protein XP_002342368 SFRS11 0.060 splicing factor, arginine/serine-rich 11 LOC100133698 0.060 PREDICTED: hypothetical protein LOC100292370 0.054 PREDICTED: hypothetical protein PSIP1 0.054 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.054 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... PSIP1 0.054 PC4 and SFRS1 interacting protein 1 isoform 2 HIST1H1C 0.054 histone cluster 1, H1c CHD7 0.054 chromodomain helicase DNA binding protein 7 RSRC1 0.054 arginine/serine-rich coiled-coil 1 SFRS12 0.054 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.054 splicing factor, arginine/serine-rich 12 isoform b [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.