Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239752864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
(386 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens] 801 0.0
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ... 801 0.0
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 52 7e-07
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 52 7e-07
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 46 5e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04
gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 42 7e-04
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 42 0.001
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 42 0.001
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 0.001
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 40 0.003
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.005
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 40 0.005
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 40 0.005
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.006
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 39 0.006
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 39 0.008
gi|39812378 RAN binding protein 9 [Homo sapiens] 39 0.010
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.014
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.014
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens] 38 0.014
gi|28269687 zygote arrest 1 [Homo sapiens] 38 0.014
gi|113423529 PREDICTED: hypothetical protein [Homo sapiens] 38 0.018
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 37 0.023
gi|40548415 dishevelled associated activator of morphogenesis 2 ... 37 0.023
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.030
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 37 0.030
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 37 0.039
>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 801 bits (2070), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA 60
MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA
Sbjct: 1 MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA 60
Query: 61 KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE 120
KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE
Sbjct: 61 KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE 120
Query: 121 VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG 180
VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG
Sbjct: 121 VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG 180
Query: 181 RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ 240
RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ
Sbjct: 181 RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ 240
Query: 241 PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP 300
PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP
Sbjct: 241 PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP 300
Query: 301 FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS 360
FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS
Sbjct: 301 FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS 360
Query: 361 QGYPHAHPPEPRDSVKSRRAKGRAGI 386
QGYPHAHPPEPRDSVKSRRAKGRAGI
Sbjct: 361 QGYPHAHPPEPRDSVKSRRAKGRAGI 386
>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
sapiens]
Length = 386
Score = 801 bits (2070), Expect = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 1 MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA 60
MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA
Sbjct: 1 MLHLQFLQVQQQPQLHLIVPPLQGCLQLGPGNDGFPVIRVRLKGVMGFSCAARGLWATAA 60
Query: 61 KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE 120
KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE
Sbjct: 61 KKRAIFILLFSGNRTSAQRSSLKNLTRVLSFLSFSLLPWASSVLPDSGPPRQQRLNKVAE 120
Query: 121 VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG 180
VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG
Sbjct: 121 VPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREG 180
Query: 181 RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ 240
RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ
Sbjct: 181 RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQ 240
Query: 241 PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP 300
PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP
Sbjct: 241 PLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFP 300
Query: 301 FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS 360
FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS
Sbjct: 301 FGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLS 360
Query: 361 QGYPHAHPPEPRDSVKSRRAKGRAGI 386
QGYPHAHPPEPRDSVKSRRAKGRAGI
Sbjct: 361 QGYPHAHPPEPRDSVKSRRAKGRAGI 386
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 52.4 bits (124), Expect = 7e-07
Identities = 85/282 (30%), Positives = 103/282 (36%), Gaps = 54/282 (19%)
Query: 122 PPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG-RRWWGVGEAR-- 178
P PRA GR + PA G+ RG G++GRL R G R L GSG RR WG+ R
Sbjct: 107 PRPRAGGGRHSPRPAVGTIFRG-GRKGRL-----REG--RGALRGSGKRRGWGLRPQRVR 158
Query: 179 ---------EGRSAPPRDW----PEPLGELRPSAP-----RGGKGGPRAGVVAA--SWAR 218
G +A PR W E LG +P P RGG GG G A S R
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 219 DSGPGVGRPVP---DLEVAVINGPQPLAICLHVQSPNDQETLETLAR---LPELPAAELT 272
P GRP P L + A+ H Q + +R +A
Sbjct: 219 ARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAAR 278
Query: 273 GHRGGGCGPGR---RVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPY 329
RGG G R R RG + R + + P G N+ R P P P+
Sbjct: 279 PTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH 338
Query: 330 PKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEP 371
LA+ PL P PP L A PP P
Sbjct: 339 ASRSTLAAQLL--------PLPQPPPPPKL------APPPLP 366
Score = 35.8 bits (81), Expect = 0.067
Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 105 PDSGPPRQQR--LNKVAEVPPPRAAHGRGTQLPAPGSGL----RGRGQRGRLSAATW-RR 157
P SG PR +R L AE RAA R QL P + + RGRG +SAA R
Sbjct: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPP 185
G AR GR G + R G + P
Sbjct: 282 GGARGHRRADGRARGGCAQLRAGTPSAP 309
Score = 28.9 bits (63), Expect = 8.2
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 29/118 (24%)
Query: 103 VLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQ-----LPAPGSGLRGRGQRGRLSAATWRR 157
+LP G R Q PPP GT+ LP G G +S + RR
Sbjct: 25 ILPQDGIKRAQ--------PPPHTP-ATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRR 75
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPR----GGKGGPRAGV 211
P R +L+GS R R P G+L P PR GG+ PR V
Sbjct: 76 NPLRTQLSGSPPR----------RPTSVLRLASPAGDL-PRRPRPRAGGGRHSPRPAV 122
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 52.4 bits (124), Expect = 7e-07
Identities = 85/282 (30%), Positives = 103/282 (36%), Gaps = 54/282 (19%)
Query: 122 PPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG-RRWWGVGEAR-- 178
P PRA GR + PA G+ RG G++GRL R G R L GSG RR WG+ R
Sbjct: 107 PRPRAGGGRHSPRPAVGTIFRG-GRKGRL-----REG--RGALRGSGKRRGWGLRPQRVR 158
Query: 179 ---------EGRSAPPRDW----PEPLGELRPSAP-----RGGKGGPRAGVVAA--SWAR 218
G +A PR W E LG +P P RGG GG G A S R
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 219 DSGPGVGRPVP---DLEVAVINGPQPLAICLHVQSPNDQETLETLAR---LPELPAAELT 272
P GRP P L + A+ H Q + +R +A
Sbjct: 219 ARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAAR 278
Query: 273 GHRGGGCGPGR---RVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPY 329
RGG G R R RG + R + + P G N+ R P P P+
Sbjct: 279 PTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH 338
Query: 330 PKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEP 371
LA+ PL P PP L A PP P
Sbjct: 339 ASRSTLAAQLL--------PLPQPPPPPKL------APPPLP 366
Score = 35.8 bits (81), Expect = 0.067
Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 105 PDSGPPRQQR--LNKVAEVPPPRAAHGRGTQLPAPGSGL----RGRGQRGRLSAATW-RR 157
P SG PR +R L AE RAA R QL P + + RGRG +SAA R
Sbjct: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPP 185
G AR GR G + R G + P
Sbjct: 282 GGARGHRRADGRARGGCAQLRAGTPSAP 309
Score = 28.9 bits (63), Expect = 8.2
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 29/118 (24%)
Query: 103 VLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQ-----LPAPGSGLRGRGQRGRLSAATWRR 157
+LP G R Q PPP GT+ LP G G +S + RR
Sbjct: 25 ILPQDGIKRAQ--------PPPHTP-ATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRR 75
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPR----GGKGGPRAGV 211
P R +L+GS R R P G+L P PR GG+ PR V
Sbjct: 76 NPLRTQLSGSPPR----------RPTSVLRLASPAGDL-PRRPRPRAGGGRHSPRPAV 122
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 51.2 bits (121), Expect = 2e-06
Identities = 84/282 (29%), Positives = 103/282 (36%), Gaps = 54/282 (19%)
Query: 122 PPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG-RRWWGVGEAR-- 178
P PRA GR + PA G+ RG G++GRL R G R + GSG RR WG+ R
Sbjct: 107 PRPRAGGGRHSPRPAVGTIFRG-GRKGRL-----REG--RGAVRGSGKRRGWGLRPQRVR 158
Query: 179 ---------EGRSAPPRDW----PEPLGELRPSAP-----RGGKGGPRAGVVAA--SWAR 218
G +A PR W E LG +P P RGG GG G A S R
Sbjct: 159 SRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPR 218
Query: 219 DSGPGVGRPVP---DLEVAVINGPQPLAICLHVQSPNDQETLETLAR---LPELPAAELT 272
P GRP P L + A+ H Q + +R +A
Sbjct: 219 ARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAAR 278
Query: 273 GHRGGGCGPGR---RVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPY 329
RGG G R R RG + R + + P G N+ R P P P+
Sbjct: 279 PTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFSPHPH 338
Query: 330 PKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEP 371
LA+ PL P PP L A PP P
Sbjct: 339 ASRSTLAAQLL--------PLPQPPPPPKL------APPPLP 366
Score = 35.8 bits (81), Expect = 0.067
Identities = 33/88 (37%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 105 PDSGPPRQQR--LNKVAEVPPPRAAHGRGTQLPAPGSGL----RGRGQRGRLSAATW-RR 157
P SG PR +R L AE RAA R QL P + + RGRG +SAA R
Sbjct: 222 PPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTR 281
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPP 185
G AR GR G + R G + P
Sbjct: 282 GGARGHRRADGRARGGCAQLRAGTPSAP 309
Score = 28.9 bits (63), Expect = 8.2
Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 29/118 (24%)
Query: 103 VLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQ-----LPAPGSGLRGRGQRGRLSAATWRR 157
+LP G R Q PPP GT+ LP G G +S + RR
Sbjct: 25 ILPQDGIKRAQ--------PPPHTP-ATGTRSSYRLLPQKGRGNLRGAPTAPVSFSRIRR 75
Query: 158 GPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPR----GGKGGPRAGV 211
P R +L+GS R R P G+L P PR GG+ PR V
Sbjct: 76 NPLRTQLSGSPPR----------RPTSVLRLASPAGDL-PRRPRPRAGGGRHSPRPAV 122
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 46.2 bits (108), Expect = 5e-05
Identities = 41/133 (30%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 117 KVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWG-VG 175
+ A PP GR + P R G+RGR++ A+ RRG RA A + +G
Sbjct: 373 RAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASRSQSETSLLG 432
Query: 176 EAREGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWAR-------DSGPGVGRPV 228
A S PP+ E RP PR G A A S R D+ G R
Sbjct: 433 RASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADG-RRVR 491
Query: 229 PDLEVAVINGPQP 241
P A + GP P
Sbjct: 492 PRAPAARVPGPGP 504
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 42.7 bits (99), Expect = 5e-04
Identities = 44/134 (32%), Positives = 50/134 (37%), Gaps = 14/134 (10%)
Query: 105 PDSGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPA---- 160
P +G P A PP RA+ G + G R G RGR AA RR PA
Sbjct: 69 PGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPG-RGR--AAATRRSPAPGTA 125
Query: 161 RAELAGSGRRWWGVGEAREG-RSAPPRDWPEPLGELRPSAPR------GGKGGPRAGVVA 213
R AG R + G RS P R P P G A G PR+ +
Sbjct: 126 RGSPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSSS 185
Query: 214 ASWARDSGPGVGRP 227
WA GPG RP
Sbjct: 186 RRWAAMPGPGAPRP 199
>gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-rich
carboxy-terminal domain, 4 [Homo sapiens]
Length = 184
Score = 42.4 bits (98), Expect = 7e-04
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 306 LSPPPLRINSFLK--RLTPPSGPSPYPKLPPLAS--SQYQNVATAW-----GPLNSPGGP 356
L PPP R L PPS P+P +PP A+ + Q VAT + P N+PGGP
Sbjct: 51 LGPPPPRQPGALAYGAFGPPSSFQPFPAVPPPAAGIAHLQPVATPYPGRAAAPPNAPGGP 110
Query: 357 PSLSQGYPHAHPPEP 371
P A PP P
Sbjct: 111 PGPQPAPSAAAPPPP 125
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 41.6 bits (96), Expect = 0.001
Identities = 73/281 (25%), Positives = 96/281 (34%), Gaps = 48/281 (17%)
Query: 98 PWASSVLPDSGPPRQQRLNKVAEVP--PPRAAHGRGTQLPAPGSGLRGRGQRGRLS---- 151
PW + R +RL+ + P P A G G +P +G R R ++
Sbjct: 324 PWGG----EGAGSRFKRLHDESPRPNFPQSLAEGLGV---SPQAGARVGEAREAVTTHER 376
Query: 152 AATWRRGPARAELAGSG----RRWWGVGEAREGRSA----PPRDWPEPLGELRPSAP--- 200
A R G ARA L + R WG GR P W +P P A
Sbjct: 377 AHLDREGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARA 436
Query: 201 -----RGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQE 255
R G+ R G S R GPG GR VP + P+ +P
Sbjct: 437 KLAGQRAGRARARTGSQVGSRGRGWGPGAGR-VPSGGRRGVGNPERWG--GEAAAPRPSR 493
Query: 256 TLETLARLPELPAAELTGHRGGGCGPGRRVRGN-ETESRRCSWNFPFGFFVLSPPPLRIN 314
L LPELPA + P R R + ++R G +PP
Sbjct: 494 VL-----LPELPAVD----------PARDTRREPDAAAQRTELGGRVGKGPGAPPSALPG 538
Query: 315 SFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGG 355
+ + G P P PP A + VA+A L PGG
Sbjct: 539 PRPRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGG 579
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 41.6 bits (96), Expect = 0.001
Identities = 73/281 (25%), Positives = 96/281 (34%), Gaps = 48/281 (17%)
Query: 98 PWASSVLPDSGPPRQQRLNKVAEVP--PPRAAHGRGTQLPAPGSGLRGRGQRGRLS---- 151
PW + R +RL+ + P P A G G +P +G R R ++
Sbjct: 324 PWGG----EGAGSRFKRLHDESPRPNFPQSLAEGLGV---SPQAGARVGEAREAVTTHER 376
Query: 152 AATWRRGPARAELAGSG----RRWWGVGEAREGRSA----PPRDWPEPLGELRPSAP--- 200
A R G ARA L + R WG GR P W +P P A
Sbjct: 377 AHLDREGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARA 436
Query: 201 -----RGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQE 255
R G+ R G S R GPG GR VP + P+ +P
Sbjct: 437 KLAGQRAGRARARTGSQVGSRGRGWGPGAGR-VPSGGRRGVGNPERWG--GEAAAPRPSR 493
Query: 256 TLETLARLPELPAAELTGHRGGGCGPGRRVRGN-ETESRRCSWNFPFGFFVLSPPPLRIN 314
L LPELPA + P R R + ++R G +PP
Sbjct: 494 VL-----LPELPAVD----------PARDTRREPDAAAQRTELGGRVGKGPGAPPSALPG 538
Query: 315 SFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGG 355
+ + G P P PP A + VA+A L PGG
Sbjct: 539 PRPRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGG 579
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 41.6 bits (96), Expect = 0.001
Identities = 65/238 (27%), Positives = 83/238 (34%), Gaps = 38/238 (15%)
Query: 98 PWASSVLPD--SGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATW 155
P ++ PD S P + R A P P A RG + P+P S +G+ GR +
Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA---RGKESPSPRSAPSSQGRGGRAAGGAG 384
Query: 156 RRGPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAAS 215
RR R S R R GR P RP+ PRG + A
Sbjct: 385 RRRRRRRRRRRS--RSSASAPRRRGRRRP-----------RPAPPRGSS----RSLSRAR 427
Query: 216 WARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHR 275
+ DSG G G P P GP+P + H + + E R + G
Sbjct: 428 SSSDSGSGRGAPGP--------GPEPGSERGH--GGHGKRAKERPPRARPASTSPSPGAH 477
Query: 276 GGGCGPGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLP 333
G GP + SW+ SP R S KR PS SP PK P
Sbjct: 478 GRRGGPEGKSSSRSPGPHPRSWSSS-----RSPSKSRSRSAEKRPHSPS-RSPSPKKP 529
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 40.4 bits (93), Expect = 0.003
Identities = 54/197 (27%), Positives = 68/197 (34%), Gaps = 39/197 (19%)
Query: 181 RSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPV---PDLEVAVIN 237
R PP+ P A RG P + + + D PG + P LE +I
Sbjct: 2860 RGRPPKKNRSPA-----DAGRGVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIP 2914
Query: 238 GPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNETESRRCSW 297
GPQPL V PN P L E +R RG ++R
Sbjct: 2915 GPQPLGP-QPVHRPN-----------PLLSPVE------------KRRRGRPPKAR---- 2946
Query: 298 NFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPP 357
+ P + S S R PP PSP LPPL VA + PP
Sbjct: 2947 DLPIPGTISSAGDGNSES---RTQPPPHPSPLTPLPPLLVCPTATVANTVTTVTISTSPP 3003
Query: 358 SLSQGYPHAHPPEPRDS 374
+G P +PP PR S
Sbjct: 3004 KRKRGRPPKNPPSPRPS 3020
Score = 31.6 bits (70), Expect = 1.3
Identities = 41/139 (29%), Positives = 54/139 (38%), Gaps = 18/139 (12%)
Query: 220 SGPGVGRPV-PDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGG 278
SGP + V P L V P P ++ SP+ LA P L +++ GH
Sbjct: 1468 SGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLL 1527
Query: 279 CGPGRRVRG-NETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPL-- 335
V G N T + CS VL P + F PS P+P P L
Sbjct: 1528 APTSSHVPGLNSTVAPACS-------PVLVPASALASPF------PSAPNPAPAQASLLA 1574
Query: 336 -ASSQYQNVATAWGPLNSP 353
ASS Q +AT P+ +P
Sbjct: 1575 PASSASQALATPLAPMAAP 1593
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.005
Identities = 67/274 (24%), Positives = 95/274 (34%), Gaps = 54/274 (19%)
Query: 105 PDSGPPRQ-QRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAE 163
P GP + ++ + P AA R P+ G GL+ R S+AT PAR+
Sbjct: 192 PTEGPRKSVSSASEHSTTEPSPAARRR----PSAGGGLQRPASRSLSSSATPLSSPARSG 247
Query: 164 LAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRP---SAPRGGKGGPRAGVVAASWARDS 220
+ G + P + P+ L LRP + PR +D+
Sbjct: 248 PSARG--------TPRAPAHPSQPKPKGLQALRPPQVTPPR----------------KDA 283
Query: 221 GPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCG 280
P +G L + + P P A SP+ +L+TL P P ++ T G
Sbjct: 284 APALG----PLSSSPLATPSPSA----PPSPSAPPSLQTLPSPPATPPSQATTSLG---S 332
Query: 281 PGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQY 340
P + + S P PP L L P P P L PLA+
Sbjct: 333 PTLQATHSFLPSP------PLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSP 386
Query: 341 Q-----NVATAWGPLNSPGGPPSLSQGYPHAHPP 369
Q V P + P PP + P A PP
Sbjct: 387 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Score = 30.4 bits (67), Expect = 2.8
Identities = 41/176 (23%), Positives = 52/176 (29%), Gaps = 39/176 (22%)
Query: 221 GPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCG 280
GP P L +A+ GP P P + TL+ +L GH
Sbjct: 554 GPDTSVSGPRLTLALAPGPPP---------PPSRSPSSTLS------GPDLAGHSSSATS 598
Query: 281 PGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQY 340
+RG ++ P G SPPP + GP+P PLA
Sbjct: 599 TPEELRGYDSG--------PEGGAAASPPPDAELAACHPAAWSRGPAP-----PLAFRGA 645
Query: 341 QNVATAWGPLNSPGGPPSLSQGY-----------PHAHPPEPRDSVKSRRAKGRAG 385
W P PG L Y P A P P +A AG
Sbjct: 646 PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 701
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 39.7 bits (91), Expect = 0.005
Identities = 43/132 (32%), Positives = 50/132 (37%), Gaps = 37/132 (28%)
Query: 266 LPAAELTGHRGG-GCGPG-RRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPP 323
+P A L+G G G PG +R RG +E P L PPPL PP
Sbjct: 209 VPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLP-----LPPPPLPP-------PPP 256
Query: 324 SGPSPYPKLPPLASSQYQNV----------ATAWGPLNSPGGPP-------SLSQGYPH- 365
P P P LP LA+S + AWGP PP SL YP+
Sbjct: 257 PPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYPYP 316
Query: 366 -----AHPPEPR 372
AHPP R
Sbjct: 317 APAYTAHPPGHR 328
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 39.7 bits (91), Expect = 0.005
Identities = 68/276 (24%), Positives = 94/276 (34%), Gaps = 35/276 (12%)
Query: 109 PPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSG 168
PP +R + PPPR R T P P +R S RR P+ +
Sbjct: 552 PPPTRRRRSPSPAPPPRR---RRTPTPPP--------RRRTPSPPPRRRSPSPRRYSPPI 600
Query: 169 RRWWGVGEAREGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARD-SGPGVGRP 227
+R + + R+A P P P PS P P+ V + + S P R
Sbjct: 601 QRRYSPSPPPKRRTASPP--PPPKRRASPSPP------PKRRVSHSPPPKQRSSPVTKRR 652
Query: 228 VPDLEVAVINGPQPLAICLHVQSP--NDQETLETLARLPELPAAELTGHRGGGCGPGRRV 285
P L G P +SP N + + R P+ ++ RG P RR
Sbjct: 653 SPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQ 712
Query: 286 RGNETES--RRCSWNFPFGFFV---LSPPPLRINSFLKRLTPPSGPSPYPKLPPLASS-- 338
+ + RR S P + SP P + + P P K PP S
Sbjct: 713 SPSPSTRPIRRVS-RTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPV 771
Query: 339 QYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEPRDS 374
Q Q+ +T W P P P P PR+S
Sbjct: 772 QSQSPSTNWSP-----AVPVKKAKSPTPSPSPPRNS 802
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.006
Identities = 68/284 (23%), Positives = 94/284 (33%), Gaps = 44/284 (15%)
Query: 105 PDSGPPRQ-QRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAE 163
P GP + ++ + P AA R P+ G GL+ R S+AT PAR+
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRR----PSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 164 LAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPS--APRGGKGGPRAGVVAASWARDSG 221
+ G + P + P+ L LRP P P G +++S
Sbjct: 257 PSARG--------TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 222 PGV-----------GRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAE 270
P P + P PLA SP+ +L+TL P P ++
Sbjct: 309 PSAALQSQAPPTLPATPHSSSLTCQLATPLPLA----PPSPSAPPSLQTLPSPPATPPSQ 364
Query: 271 LTGHRGGGCGPGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYP 330
T G P + + S P PP L L P P P
Sbjct: 365 ATTSLG---SPTLQATHSFLPSP------PLSPLATPPPQAPPALALPPLQAPPSPPASP 415
Query: 331 KLPPLASSQYQ-----NVATAWGPLNSPGGPPSLSQGYPHAHPP 369
L PLA+ Q V P + P PP + P A PP
Sbjct: 416 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 459
Score = 30.4 bits (67), Expect = 2.8
Identities = 41/176 (23%), Positives = 52/176 (29%), Gaps = 39/176 (22%)
Query: 221 GPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCG 280
GP P L +A+ GP P P + TL+ +L GH
Sbjct: 593 GPDTSVSGPRLTLALAPGPPP---------PPSRSPSSTLS------GPDLAGHSSSATS 637
Query: 281 PGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQY 340
+RG ++ P G SPPP + GP+P PLA
Sbjct: 638 TPEELRGYDSG--------PEGGAAASPPPDAELAACHPAAWSRGPAP-----PLAFRGA 684
Query: 341 QNVATAWGPLNSPGGPPSLSQGY-----------PHAHPPEPRDSVKSRRAKGRAG 385
W P PG L Y P A P P +A AG
Sbjct: 685 PGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 740
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 39.3 bits (90), Expect = 0.006
Identities = 70/298 (23%), Positives = 94/298 (31%), Gaps = 58/298 (19%)
Query: 101 SSVLPDSGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPA 160
S LP S P ++ L V P PR A + L Q + W
Sbjct: 1276 SLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLS---------NQNSDQANEEWETASE 1326
Query: 161 RAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDS 220
++ E R + APP P L P GG GG G+ A S
Sbjct: 1327 SSDFTS---------ERRGDKEAPP---PVLLTPKAVGTPGGGGGGAVPGISAMSRG--- 1371
Query: 221 GPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAEL----TGHRG 276
+ + DL + +P +E R P P + + G
Sbjct: 1372 --DLSQRAKDLSKRSFSSQRP--------------GMERQNRRPG-PGGKAGSSGSSSGG 1414
Query: 277 GGCGPGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLA 336
GG GPG R + R SW P S PP L PP S +L +
Sbjct: 1415 GGGGPGGRTGPGRGDKR--SWPSPKN---RSRPPEERPPGLPLPPPPPSSSAVFRLDQVI 1469
Query: 337 SSQYQNVATAWGPLNS-------PGGPPSLSQGYPHA-HPPEPRDSVKSRRAKGRAGI 386
S + A L+S PGG P G P A P PR + + +G+
Sbjct: 1470 HSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGL 1527
Score = 35.4 bits (80), Expect = 0.088
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 321 TPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYPHAHPPEPRDSVKSRRA 380
T P P+P P LPP ++ A WGP PG P +G P PP P D ++ R
Sbjct: 401 TEPGPPAPKPPLPP----PHRGPAGNWGP---PGDYP--DRGGPPCKPPAPEDEDEAWRQ 451
Query: 381 K 381
+
Sbjct: 452 R 452
Score = 28.9 bits (63), Expect = 8.2
Identities = 39/161 (24%), Positives = 51/161 (31%), Gaps = 22/161 (13%)
Query: 205 GGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLP 264
G P + A A + P P P + + P P P T ET P
Sbjct: 498 GAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAP--------PPASAPTPETEPEEP 549
Query: 265 -ELPAAELTGHRGGGCGPGRRVRGNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPP 323
+ P A+ T G P G T S G F SP ++ S
Sbjct: 550 AQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSS------GSFEASPVEPQLPS-------K 596
Query: 324 SGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSLSQGYP 364
GP P ++PP + V + PPS GYP
Sbjct: 597 EGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYP 637
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 38.9 bits (89), Expect = 0.008
Identities = 64/249 (25%), Positives = 88/249 (35%), Gaps = 52/249 (20%)
Query: 145 GQRGRLSAATWRRGPARAELAGSGRRWWGVGEA------------REGRSAPPRDWPEPL 192
G G SA T G A +AG G +G + + G +P P P
Sbjct: 885 GACGSPSAPTPSAGVAATTIAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQPSPA 944
Query: 193 GELRPSAPRGGKGGPRAGVVAASWARD--SGPG-VGRPVPDLEVAVINGPQPLAICLHVQ 249
P RGG G P + +R S PG +G+P +L + + GP
Sbjct: 945 ----PPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPL--------- 991
Query: 250 SPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVRGNET---ESRRCSWNFPFGFFVL 306
T ET R PE P+ + G GG G RG + S FP
Sbjct: 992 -----STPETPPRQPEPPSL-VAGASGGASPVGFTPRGGLSPPGHSPGPPRTFP------ 1039
Query: 307 SPPPLRINSFLKRLTPPSGPSPYPKLP---------PLASSQYQNVATAWGPLNSPGGPP 357
S PP S L PP+ P P++P P +Q + +A P G
Sbjct: 1040 SAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQ 1099
Query: 358 SLSQGYPHA 366
+L + PH+
Sbjct: 1100 TLRRASPHS 1108
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 38.5 bits (88), Expect = 0.010
Identities = 48/178 (26%), Positives = 62/178 (34%), Gaps = 35/178 (19%)
Query: 105 PDSGPPRQQRLNKVAEVPPPRA-AHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAE 163
P PP+QQ+ + PPP A A G LPAP A + PA +
Sbjct: 5 PPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAP-------------PAVSAGSSPAGSP 51
Query: 164 LAGSGRRWWGVGEAR----------EGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVA 213
G+G G A +APP P P +AP G P
Sbjct: 52 GGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAP------ 105
Query: 214 ASWARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPEL-PAAE 270
A GP G P P A++ G A H S +++ E RL L PA +
Sbjct: 106 PGLAAGPGPAGGAPTP----ALVAGSSAAAPFPHGDSALNEQEKELQRRLKRLYPAVD 159
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 38.1 bits (87), Expect = 0.014
Identities = 46/170 (27%), Positives = 61/170 (35%), Gaps = 33/170 (19%)
Query: 198 SAPRGGKGGPRAGVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAICLHVQSPNDQETL 257
+A RGG G R V G P P L VA ++G +P H +P ++
Sbjct: 12 AAVRGGGAGRRVRVGVGEPG-----GFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAA 66
Query: 258 ETLARLPEL-PAAELTGHRGGGCG-------PGRRVRGNETESRRCSWNFPFGFFVLSPP 309
L+ L P G +GGG G P + RG P SP
Sbjct: 67 ARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGA-----------PAVPAAPSPG 115
Query: 310 PLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGGPPSL 359
PL PS P P P PP+ ++Q ++ W P PSL
Sbjct: 116 PLPAR--------PSSPPPSPPSPPVPTAQ-SSLPAPWPPQGPRSPAPSL 156
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 38.1 bits (87), Expect = 0.014
Identities = 35/99 (35%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 135 PAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGE 194
P P + R A T R GP +A GS R+ G EA G R PE
Sbjct: 105 PPPPARARQENGMPEEPATTARGGPGKA---GSRGRFAGHSEAGGGSGDRRRAGPEK--- 158
Query: 195 LRPSAPRGGKGGPRAGVVAASWARD----SGPGVGRPVP 229
RP + R G GGP+ +RD SGP VG P P
Sbjct: 159 -RPKSSREGSGGPQES------SRDKRPLSGPDVGTPQP 190
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 38.1 bits (87), Expect = 0.014
Identities = 35/99 (35%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 135 PAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGE 194
P P + R A T R GP +A GS R+ G EA G R PE
Sbjct: 105 PPPPARARQENGMPEEPATTARGGPGKA---GSRGRFAGHSEAGGGSGDRRRAGPEK--- 158
Query: 195 LRPSAPRGGKGGPRAGVVAASWARD----SGPGVGRPVP 229
RP + R G GGP+ +RD SGP VG P P
Sbjct: 159 -RPKSSREGSGGPQES------SRDKRPLSGPDVGTPQP 190
>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 38.1 bits (87), Expect = 0.014
Identities = 35/99 (35%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 135 PAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRRWWGVGEAREGRSAPPRDWPEPLGE 194
P P + R A T R GP +A GS R+ G EA G R PE
Sbjct: 105 PPPPARARQENGMPEEPATTARGGPGKA---GSRGRFAGHSEAGGGSGDRRRAGPEK--- 158
Query: 195 LRPSAPRGGKGGPRAGVVAASWARD----SGPGVGRPVP 229
RP + R G GGP+ +RD SGP VG P P
Sbjct: 159 -RPKSSREGSGGPQES------SRDKRPLSGPDVGTPQP 190
>gi|28269687 zygote arrest 1 [Homo sapiens]
Length = 424
Score = 38.1 bits (87), Expect = 0.014
Identities = 39/136 (28%), Positives = 52/136 (38%), Gaps = 21/136 (15%)
Query: 105 PDSGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAEL 164
P +G PR R + V P A L PG G++ R A+ RGP A L
Sbjct: 165 PQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGP---AAGEQ-RSGASDGERGPPPARL 220
Query: 165 AG--SGRRWWGVGEAR-------EGRSAPPRDWPEPLG--ELRPSAPRGGKGGPRAGV-- 211
G G W R E ++A W +P EL P + G+ PR+ +
Sbjct: 221 QGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRS 280
Query: 212 ----VAASWARDSGPG 223
+A ARD G G
Sbjct: 281 PGQPPSAGRARDGGDG 296
>gi|113423529 PREDICTED: hypothetical protein [Homo sapiens]
Length = 276
Score = 37.7 bits (86), Expect = 0.018
Identities = 60/211 (28%), Positives = 79/211 (37%), Gaps = 42/211 (19%)
Query: 113 QRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARA----ELAGSG 168
+RL + PP A G G G + G+ GR RR + +L G
Sbjct: 73 RRLIRCPSPAPPGGAGGLGEGRQDGGGEV---GRAGRRCCRRHRRLRSSRLWSFKLTPPG 129
Query: 169 RRWWGVGEAREGRSAPPRDWPE-----PLGELRPSAPRGGKGGPRAG--VVAASWARDSG 221
R G G E +S P WP PL + P P GG+ GP G +A +W
Sbjct: 130 RSCAGAGSRGESKSFP---WPFSPSTLPLPDSLPLPPSGGRAGPGWGDSHLAPAW----- 181
Query: 222 PGVGRPVPDLEVA---VINGPQPLAICLH------VQSPNDQETLETLARLPELPAAELT 272
G+ R +P L A + G P A L+ P + + A P A L+
Sbjct: 182 -GLPRRLPLLAAARSGALGGMFPTAAPLYSLPLFVSAGPRCRRSWGFRA-----PGAPLS 235
Query: 273 GHRGGGCGPGRRVRGNETESRRCSWNFPFGF 303
G GP RV +RR W PFGF
Sbjct: 236 RAGGTPLGPRGRVC-----ARRLRWVRPFGF 261
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 37.4 bits (85), Expect = 0.023
Identities = 50/185 (27%), Positives = 60/185 (32%), Gaps = 34/185 (18%)
Query: 105 PDSGPPRQQRLNKVAEVPPPRAAHGRGTQLPAPGSGLRGRGQRGRLSAATWRRGPARAEL 164
P G PR + PPP AA R L G RGR G S +T + +
Sbjct: 3 PALGHPRSVSSASGSFPPPPAAA--RLQPLFLRGGSFRGRRGSGDSSTST-----STSRG 55
Query: 165 AGSGRRWWGVGEAREGRSAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGV 224
G GRR G G A D E L +P P GP A V A +
Sbjct: 56 GGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPA--------- 106
Query: 225 GRPVPDLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGC--GPG 282
GP P+A S + T + AA+ G G GPG
Sbjct: 107 -------------GPAPVAFS---SSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPG 150
Query: 283 RRVRG 287
R G
Sbjct: 151 SRSAG 155
>gi|40548415 dishevelled associated activator of morphogenesis 2
[Homo sapiens]
Length = 1067
Score = 37.4 bits (85), Expect = 0.023
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 20/88 (22%)
Query: 305 VLSPPP----LRINSFLKR--LTPPSGPSPY-----PKLPPLASSQYQNVATAWGPLNSP 353
V SPPP L ++S + L PP P P+ P PPL GP P
Sbjct: 519 VSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPG---------GPPTPP 569
Query: 354 GGPPSLSQGYPHAHPPEPRDSVKSRRAK 381
G PP L G P P P V R+ +
Sbjct: 570 GAPPCLGMGLPLPQDPYPSSDVPLRKKR 597
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.030
Identities = 72/271 (26%), Positives = 93/271 (34%), Gaps = 44/271 (16%)
Query: 112 QQRLNKVAEVPPPRAAHGR-GTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRR 170
Q++L P + GR L AP RG G+ G +AA RRG A L+G ++
Sbjct: 203 QEQLRNAPWAPRAHSPAGRLALGLIAPR---RGAGRAGAGAAACGRRGRIAAPLSGVVQK 259
Query: 171 WWGVGEAREGR-SAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVP 229
+ R + P P G P + G+ R G A +R P G
Sbjct: 260 ASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACG---- 315
Query: 230 DLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR--- 286
+ +A PQP + P T + A H+ G RR R
Sbjct: 316 -VGLARGTAPQPASTWALAARPRAGGTWTS-----RFEAQRGCAHQDG----QRRTRDGA 365
Query: 287 GNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATA 346
GN W SPPP R +RL S + PP A A
Sbjct: 366 GNHASEPARVW---------SPPPRRQRP--RRLPRASLQEEPKRRPPCARPSGAGPARE 414
Query: 347 WGPLNSPGGPPSLSQGYPHAHP------PEP 371
GP PGG P+ PHA P PEP
Sbjct: 415 -GPAAWPGGAPT----PPHARPTGRRQDPEP 440
Score = 32.3 bits (72), Expect = 0.74
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 173 GVGEAREGRSAPPRDWPEPLGELRPSA----PRGGKGGPRAGVVAASWARDSGPGVG 225
G G AREG +A P P P RP+ P G PR G ++ W S G G
Sbjct: 408 GAGPAREGPAAWPGGAPTP-PHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRG 463
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.030
Identities = 72/271 (26%), Positives = 93/271 (34%), Gaps = 44/271 (16%)
Query: 112 QQRLNKVAEVPPPRAAHGR-GTQLPAPGSGLRGRGQRGRLSAATWRRGPARAELAGSGRR 170
Q++L P + GR L AP RG G+ G +AA RRG A L+G ++
Sbjct: 203 QEQLRNAPWAPRAHSPAGRLALGLIAPR---RGAGRAGAGAAACGRRGRIAAPLSGVVQK 259
Query: 171 WWGVGEAREGR-SAPPRDWPEPLGELRPSAPRGGKGGPRAGVVAASWARDSGPGVGRPVP 229
+ R + P P G P + G+ R G A +R P G
Sbjct: 260 ASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACG---- 315
Query: 230 DLEVAVINGPQPLAICLHVQSPNDQETLETLARLPELPAAELTGHRGGGCGPGRRVR--- 286
+ +A PQP + P T + A H+ G RR R
Sbjct: 316 -VGLARGTAPQPASTWALAARPRAGGTWTS-----RFEAQRGCAHQDG----QRRTRDGA 365
Query: 287 GNETESRRCSWNFPFGFFVLSPPPLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATA 346
GN W SPPP R +RL S + PP A A
Sbjct: 366 GNHASEPARVW---------SPPPRRQRP--RRLPRASLQEEPKRRPPCARPSGAGPARE 414
Query: 347 WGPLNSPGGPPSLSQGYPHAHP------PEP 371
GP PGG P+ PHA P PEP
Sbjct: 415 -GPAAWPGGAPT----PPHARPTGRRQDPEP 440
Score = 32.3 bits (72), Expect = 0.74
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 173 GVGEAREGRSAPPRDWPEPLGELRPSA----PRGGKGGPRAGVVAASWARDSGPGVG 225
G G AREG +A P P P RP+ P G PR G ++ W S G G
Sbjct: 408 GAGPAREGPAAWPGGAPTP-PHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRG 463
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 36.6 bits (83), Expect = 0.039
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 299 FPFGFFVLSPP---PLRINSFLKRLTPPSGPSPYPKLPPLASSQYQNVATAWGPLNSPGG 355
FPFG + PP P F L+PP GP P PP + + + P PG
Sbjct: 43 FPFGTGFVPPPHPPPYGPGRFPPPLSPPYGPGRIPPSPPPPYGPGRIQSHSLPPPYGPGY 102
Query: 356 PPSLSQGYPHAHPPEP 371
P SQ P +PP P
Sbjct: 103 PQPPSQ--PRPYPPGP 116
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 306 LSPPPLRINSFLKRLTPPSGPSPY--PKLPPLASSQY------QNVATAWGP--LNSPGG 355
L+PPP F PP P PY + PP S Y + +GP + S
Sbjct: 35 LAPPPPPCFPFGTGFVPPPHPPPYGPGRFPPPLSPPYGPGRIPPSPPPPYGPGRIQSHSL 94
Query: 356 PPSLSQGYPHAHPPEPR 372
PP GYP P +PR
Sbjct: 95 PPPYGPGYPQP-PSQPR 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,108,952
Number of Sequences: 37866
Number of extensions: 1376854
Number of successful extensions: 7961
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 7201
Number of HSP's gapped (non-prelim): 1236
length of query: 386
length of database: 18,247,518
effective HSP length: 104
effective length of query: 282
effective length of database: 14,309,454
effective search space: 4035266028
effective search space used: 4035266028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.