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Search of human proteins with 239752802
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752802 PREDICTED: hypothetical protein [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752802 PREDICTED: hypothetical protein [Homo sapiens] 347 3e-96
gi|239747364 PREDICTED: hypothetical protein [Homo sapiens] 347 3e-96
gi|239741189 PREDICTED: hypothetical protein XP_002342132 [Homo ... 347 3e-96
gi|239756272 PREDICTED: hypothetical protein XP_002344878 [Homo ... 33 0.12
gi|239750813 PREDICTED: hypothetical protein XP_002347569 [Homo ... 33 0.12
gi|239745173 PREDICTED: hypothetical protein XP_002343380 [Homo ... 33 0.12
gi|154091312 transient receptor potential cation channel, subfam... 32 0.20
gi|154091308 transient receptor potential cation channel, subfam... 32 0.20
gi|154091310 transient receptor potential cation channel, subfam... 32 0.20
gi|154091320 transient receptor potential cation channel, subfam... 32 0.20
gi|154091318 transient receptor potential cation channel, subfam... 32 0.20
gi|154091316 transient receptor potential cation channel, subfam... 32 0.20
gi|154091314 transient receptor potential cation channel, subfam... 32 0.20
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 32 0.34
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 31 0.45
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 31 0.45
gi|169206328 PREDICTED: hypothetical protein [Homo sapiens] 31 0.59
gi|134254443 pecanex-like 2 [Homo sapiens] 30 0.77
gi|38570105 Ras-interacting protein 1 [Homo sapiens] 30 1.0
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 30 1.0
gi|16418349 cob(I)alamin adenosyltransferase precursor [Homo sap... 30 1.3
gi|157739945 tetratricopeptide repeat, ankyrin repeat and coiled... 29 1.7
gi|116235474 LKB1 interacting protein [Homo sapiens] 29 1.7
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 29 2.2
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 29 2.2
gi|157426887 dedicator of cytokinesis 6 [Homo sapiens] 29 2.2
gi|254028240 MAP/microtubule affinity-regulating kinase 2 isofor... 28 2.9
gi|254028232 MAP/microtubule affinity-regulating kinase 2 isofor... 28 2.9
gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform... 28 2.9
gi|188536004 zinc finger protein 469 [Homo sapiens] 28 2.9
>gi|239752802 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 347 bits (890), Expect = 3e-96
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK
Sbjct: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
Query: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS
Sbjct: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
Query: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM
Sbjct: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
>gi|239747364 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 347 bits (890), Expect = 3e-96
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK
Sbjct: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
Query: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS
Sbjct: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
Query: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM
Sbjct: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
>gi|239741189 PREDICTED: hypothetical protein XP_002342132 [Homo
sapiens]
Length = 170
Score = 347 bits (890), Expect = 3e-96
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK
Sbjct: 1 MLGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGK 60
Query: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS
Sbjct: 61 FYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQERAERRCQKKFCS 120
Query: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM
Sbjct: 121 REVLNLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRARM 170
>gi|239756272 PREDICTED: hypothetical protein XP_002344878 [Homo
sapiens]
Length = 141
Score = 33.1 bits (74), Expect = 0.12
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 2 LGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKF 61
L R +G T GA VS + L P+ +R P+RP L R + R P +
Sbjct: 13 LRRRQSGVTLRGAV---VSGGVRL-PASERRFLSCCPLPARPLLQRLASRHPASLPCSQQ 68
Query: 62 YRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPP 97
S R P+ +L + T ++ GH+HP P
Sbjct: 69 LLWRSSRAPPLLPSLPLGVLITDPLTRHPGHHHPAP 104
>gi|239750813 PREDICTED: hypothetical protein XP_002347569 [Homo
sapiens]
Length = 141
Score = 33.1 bits (74), Expect = 0.12
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 2 LGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKF 61
L R +G T GA VS + L P+ +R P+RP L R + R P +
Sbjct: 13 LRRRQSGVTLRGAV---VSGGVRL-PASERRFLSCCPLPARPLLQRLASRHPASLPCSQQ 68
Query: 62 YRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPP 97
S R P+ +L + T ++ GH+HP P
Sbjct: 69 LLWRSSRAPPLLPSLPLGVLITDPLTRHPGHHHPAP 104
>gi|239745173 PREDICTED: hypothetical protein XP_002343380 [Homo
sapiens]
Length = 141
Score = 33.1 bits (74), Expect = 0.12
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 2 LGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKF 61
L R +G T GA VS + L P+ +R P+RP L R + R P +
Sbjct: 13 LRRRQSGVTLRGAV---VSGGVRL-PASERRFLSCCPLPARPLLQRLASRHPASLPCSQQ 68
Query: 62 YRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPP 97
S R P+ +L + T ++ GH+HP P
Sbjct: 69 LLWRSSRAPPLLPSLPLGVLITDPLTRHPGHHHPAP 104
>gi|154091312 transient receptor potential cation channel, subfamily
M, member 3 isoform b [Homo sapiens]
Length = 1566
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1288 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1344
Query: 102 YPASP 106
+ + P
Sbjct: 1345 WDSEP 1349
>gi|154091308 transient receptor potential cation channel, subfamily
M, member 3 isoform f [Homo sapiens]
Length = 1579
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1301 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1357
Query: 102 YPASP 106
+ + P
Sbjct: 1358 WDSEP 1362
>gi|154091310 transient receptor potential cation channel, subfamily
M, member 3 isoform g [Homo sapiens]
Length = 1569
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1291 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1347
Query: 102 YPASP 106
+ + P
Sbjct: 1348 WDSEP 1352
>gi|154091320 transient receptor potential cation channel, subfamily
M, member 3 isoform a [Homo sapiens]
Length = 1554
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1276 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1332
Query: 102 YPASP 106
+ + P
Sbjct: 1333 WDSEP 1337
>gi|154091318 transient receptor potential cation channel, subfamily
M, member 3 isoform d [Homo sapiens]
Length = 1544
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1266 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1322
Query: 102 YPASP 106
+ + P
Sbjct: 1323 WDSEP 1327
>gi|154091316 transient receptor potential cation channel, subfamily
M, member 3 isoform e [Homo sapiens]
Length = 1556
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1278 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1334
Query: 102 YPASP 106
+ + P
Sbjct: 1335 WDSEP 1339
>gi|154091314 transient receptor potential cation channel, subfamily
M, member 3 isoform k [Homo sapiens]
Length = 1707
Score = 32.3 bits (72), Expect = 0.20
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFR-LPTTQTQSQSTGHYHPPPCRNN 101
PS S P P T S Y T + RP ++ F + + T+S S+ + H P C+N
Sbjct: 1429 PSFSTPVPST---APSSSAYATLAPTDRPPSRSIDFEDITSMDTRSFSSDYTHLPECQNP 1485
Query: 102 YPASP 106
+ + P
Sbjct: 1486 WDSEP 1490
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 31.6 bits (70), Expect = 0.34
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 20 SDALLLAPSGRQRSRDTVASPSRPSLSR-PSP---RTPRMTHS-----GKFYRTTSLRQR 70
SDAL Q S+ + ASPS P +S PSP TP S +F +T +
Sbjct: 192 SDALSPDQPASQESQGSAASPSEPKVSESPSPVTTNTPAQFASVSPTVPEFLKTPPTADQ 251
Query: 71 PVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQER-AERRCQ 115
P LPT S G P + ++P +P ++ ++C+
Sbjct: 252 PPPRPAAPVLPTNTVSSAKPG---PALVKQSHPKNPNDKHRSKKCK 294
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 31.2 bits (69), Expect = 0.45
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 7 AGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRM-----THSGKF 61
A T G SP +PS QRS ASPS P ++P P+T R +GK
Sbjct: 3507 ASPTSPGGSPS--------SPSSGQRS----ASPSVPGPTKPKPKTKRFQLPLDKGNGKK 3554
Query: 62 YRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHP-PPCRNNYPASPQERAERRC 114
++ + LR ++ +P +T S ++G P AS ++ +++ C
Sbjct: 3555 HKVSHLR----TSSSEAHIPDQETTSLTSGTGTPGAEAEQQDTASVEQSSQKEC 3604
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 31.2 bits (69), Expect = 0.45
Identities = 46/164 (28%), Positives = 62/164 (37%), Gaps = 12/164 (7%)
Query: 10 TFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQ 69
T S ASP G +P+G + SPSR SL+ RTP K T S+ +
Sbjct: 460 TQSTASPTGSPSTA--SPTGSPSTASPTGSPSRASLT----RTPSRASLTKMESTASITR 513
Query: 70 RPVRNNLFFRLPT-TQTQSQSTGHYHPPPCRNNYPASPQE----RAERRCQKKFCSREVL 124
P R + + T + T S ST P R +P R R SR L
Sbjct: 514 TPSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASL 573
Query: 125 NLILATSLFLSFFLSPNPHQRVASETSRDFVPSVSAPLRHDGRA 168
+T L S +P + S TS +PS + + D A
Sbjct: 574 TRTPSTVLLTRMPPSASP-TGMPSRTSPTGMPSSALLTKMDSTA 616
>gi|169206328 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 30.8 bits (68), Expect = 0.59
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 43 PSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNY 102
P L RPSP TP + S YR S R P + L +L + Q + H+ P R+
Sbjct: 263 PRLRRPSPGTP--SPSAAIYRPPSARFAPGPSCL-LQLGSHQRRDNKQVHWTGPCTRSGA 319
Query: 103 PASPQERAERRCQKKFCSREVLNLILATSLFLSFFLSP 140
S E RC C +L + F FFL P
Sbjct: 320 AVS-----ETRCCLPRC--HLLGAREEDATFSEFFLEP 350
>gi|134254443 pecanex-like 2 [Homo sapiens]
Length = 2137
Score = 30.4 bits (67), Expect = 0.77
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 7 AGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFY--RT 64
A Q G + GVS +GR++ R S S + S S R P ++ SG R
Sbjct: 1909 AEQPRKGGAQHGVSSCEGTQRTGRRKGR----SQSVQAHSALSQRPPMLSSSGPILESRQ 1964
Query: 65 TSLRQRPVRNNLFFRLPTTQTQ---SQSTGHYHPPPCRNNYPASPQERAE 111
T L+ + L RL ++ S ++ H PPP S +ERAE
Sbjct: 1965 TFLQTSTSVHELAQRLSGSRLSLHASATSLHSQPPPVTTTGHLSVRERAE 2014
>gi|38570105 Ras-interacting protein 1 [Homo sapiens]
Length = 963
Score = 30.0 bits (66), Expect = 1.0
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 13 GASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSG 59
G SP D L AP R A P P++ RPS P +TH+G
Sbjct: 417 GGSPAPYVDTFLNAPDILPRHCTVRAGPEHPAMVRPSRGAP-VTHNG 462
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 30.0 bits (66), Expect = 1.0
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 30 RQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPTTQTQSQS 89
R RSR S SR PS PR H + R+ S R+RP R P+ + ++
Sbjct: 275 RPRSRSRSKSRSRTRSRSPSHTRPRRRHRSR-SRSYSPRRRPSPR----RRPSPRRRTPP 329
Query: 90 TGHYHPPPCRNNYPASPQERAER 112
PPP R+ SP R R
Sbjct: 330 --RRMPPPPRHRRSRSPVRRRRR 350
>gi|16418349 cob(I)alamin adenosyltransferase precursor [Homo
sapiens]
Length = 250
Score = 29.6 bits (65), Expect = 1.3
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 2 LGSRYAGQTFSGASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRM---THS 58
LGSR + GA A LL P + R V RP S +PR P++ T
Sbjct: 12 LGSRLGLRGCFGA-------ARLLYPRFQSRGPQGVEDGDRPQPSSKTPRIPKIYTKTGD 64
Query: 59 GKFYRTTSLRQRPVRNNLFFRLPTTQTQSQSTG 91
F T + +RP + +F + TT S + G
Sbjct: 65 KGFSSTFTGERRPKDDQVFEAVGTTDELSSAIG 97
>gi|157739945 tetratricopeptide repeat, ankyrin repeat and coiled-coil
containing 2 [Homo sapiens]
Length = 1990
Score = 29.3 bits (64), Expect = 1.7
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 32 RSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPTTQTQSQSTG 91
RS +V SP+R + SP TH YR + P +R Q
Sbjct: 1469 RSSSSVGSPTRQTYQSTSPALSP-THQNSHYRPSPPHTSPAHQGGSYRFSPPPVGGQGKE 1527
Query: 92 HYHPPPCRNNYPASPQERA 110
+ PPP + PQ RA
Sbjct: 1528 YPSPPP--SPLRRGPQYRA 1544
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 29.3 bits (64), Expect = 1.7
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 24/102 (23%)
Query: 30 RQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYR-------TTSLRQRPVRNNLFFR--- 79
+ R R AS S PS + P PRT + +G F + +S R+R RN L +R
Sbjct: 389 KSRVRVRRASISEPSDTDPEPRTLNPSPAGWFVQQHPELELMSSFRERFGRNWLQYRSHL 448
Query: 80 ------LPTTQTQSQSTGHYHPP-----PCRNNYPASPQERA 110
LP T T S + PP P P+ PQE A
Sbjct: 449 EPSGNPLPATPTTSAPSA---PPASSQGPDTAPRPSPPQEEA 487
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 28.9 bits (63), Expect = 2.2
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 12 SGASPR-GVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQR 70
SG S R G LLA + + A PSRP P P + R+ + + R
Sbjct: 740 SGPSERPGPPQRALLARGTKASALSFPAPPSRPL--PPDPVSKRL--QAELADRPNPPTR 795
Query: 71 PVRNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPASPQER 109
P+ + R P +Q G PPP R PA PQ R
Sbjct: 796 PLPADPVVRSPKSQ------GPAKPPPPRKPLPADPQGR 828
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 28.9 bits (63), Expect = 2.2
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 32 RSRDTVASPSRPSLS----RPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPTTQTQS 87
RS P P+ S RP TP +G + T++ P N F P T + +
Sbjct: 13 RSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPNGFSNGPATSSTA 72
Query: 88 QSTGHYHPPPC 98
+ + PP C
Sbjct: 73 SLSTQHLPPAC 83
>gi|157426887 dedicator of cytokinesis 6 [Homo sapiens]
Length = 2047
Score = 28.9 bits (63), Expect = 2.2
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 28 SGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPTTQTQS 87
SG +RS ++ SR P TPR + + + +L + +L R
Sbjct: 159 SGDERSGPEDSNDSRRGSGSPED-TPRSSGASSIFDLRNLAADSLLPSLLERAAPEDVDR 217
Query: 88 QSTG---HYHPPPCRNNYPASPQERAERRCQKKFCSREVL-NLILATSLFLSFFLSPNP 142
++ + PP YPA ++ A RC + RE IL L L F + P
Sbjct: 218 RNETLRRQHRPPALLTLYPAPDEDEAVERCSRPEPPREHFGQRILVKCLSLKFEIEIEP 276
>gi|254028240 MAP/microtubule affinity-regulating kinase 2 isoform f
[Homo sapiens]
Length = 709
Score = 28.5 bits (62), Expect = 2.9
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 23 LLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPT 82
LLL + DT+ RPS + P +H + + + +QR + +PT
Sbjct: 359 LLLGYKSSELEGDTITLKPRPSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAGPAIPT 418
Query: 83 T-----QTQSQSTGHYHPPPCRNN---------YPASPQERAERRCQKKFCSREVLNLIL 128
+ +TQS + + P R + PASP ER KK N +L
Sbjct: 419 SNSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLER---KKTTPTPSTNSVL 475
Query: 129 ATS 131
+TS
Sbjct: 476 STS 478
>gi|254028232 MAP/microtubule affinity-regulating kinase 2 isoform c
[Homo sapiens]
Length = 724
Score = 28.5 bits (62), Expect = 2.9
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 23 LLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPT 82
LLL + DT+ RPS + P +H + + + +QR + +PT
Sbjct: 359 LLLGYKSSELEGDTITLKPRPSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAGPAIPT 418
Query: 83 T-----QTQSQSTGHYHPPPCRNN---------YPASPQERAERRCQKKFCSREVLNLIL 128
+ +TQS + + P R + PASP ER KK N +L
Sbjct: 419 SNSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLER---KKTTPTPSTNSVL 475
Query: 129 ATS 131
+TS
Sbjct: 476 STS 478
>gi|86990441 MAP/microtubule affinity-regulating kinase 2 isoform a
[Homo sapiens]
Length = 745
Score = 28.5 bits (62), Expect = 2.9
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 23 LLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPVRNNLFFRLPT 82
LLL + DT+ RPS + P +H + + + +QR + +PT
Sbjct: 326 LLLGYKSSELEGDTITLKPRPSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAGPAIPT 385
Query: 83 T-----QTQSQSTGHYHPPPCRNN---------YPASPQERAERRCQKKFCSREVLNLIL 128
+ +TQS + + P R + PASP ER KK N +L
Sbjct: 386 SNSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLER---KKTTPTPSTNSVL 442
Query: 129 ATS 131
+TS
Sbjct: 443 STS 445
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 28.5 bits (62), Expect = 2.9
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 10/93 (10%)
Query: 13 GASPRGVSDALLLAPSGRQRSRDTVASPSRPSLSRPSPRTPRMTHSGKFYRTTSLRQRPV 72
G PRG + +G + R +SP PS TP RTT +
Sbjct: 3 GERPRGAPPPTM---TGDLQPRQVASSPGHPSQPPLEDNTPAT-------RTTKGAREAG 52
Query: 73 RNNLFFRLPTTQTQSQSTGHYHPPPCRNNYPAS 105
LP Q + G PP R P+S
Sbjct: 53 GQAQAMELPEAQPRQARDGELKPPSLRGQAPSS 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,831,068
Number of Sequences: 37866
Number of extensions: 391286
Number of successful extensions: 1742
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1562
Number of HSP's gapped (non-prelim): 215
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.