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Name: TRPM3 Sequence: fasta or formatted (1566aa) NCBI GI: 154091312
Description:

transient receptor potential cation channel, subfamily M, member 3 isoform b

Referenced in:

Calcium and TRP Cation Channels

Other entries for this name:
alt prot [1579aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1569aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1707aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1556aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1544aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1554aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [230aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [255aa] transient receptor potential cation channel, subfamily M, member ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         94           2
 C cysteine            1.5         23           2
 D aspartate           5.4         84           2
 E glutamate           7.3        115           3
 F phenylalanine       4.1         64           2
 G glycine             5.0         79           2
 H histidine           2.6         40           1
 I isoleucine          6.8        107           2
 K lysine              5.9         92           3
 L leucine             9.9        155           3
 M methionine          3.8         60           2
 N asparagine          4.0         62           2
 P proline             5.2         81           3
 Q glutamine           3.6         57           2
 R arginine            6.1         96           2
 S serine              7.9        123           3
 T threonine           4.9         76           2
 V valine              5.4         84           3
 W tryptophan          1.4         22           1
 Y tyrosine            3.3         52           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transient receptor potential cation channel, subfam... 
TRPM3                 0.991   transient receptor potential cation channel, subfam...
TRPM3                 0.988   transient receptor potential cation channel, subfam...
TRPM3                 0.988   transient receptor potential cation channel, subfam...
TRPM3                 0.983   transient receptor potential cation channel, subfam...
TRPM3                 0.979   transient receptor potential cation channel, subfam...
TRPM3                 0.975   transient receptor potential cation channel, subfam...
TRPM7                 0.427   transient receptor potential cation channel, subfam...
TRPM6                 0.395   transient receptor potential cation channel, subfami...
TRPM1                 0.384   transient receptor potential cation channel, subfami...
TRPM2                 0.160   transient receptor potential cation channel, subfamil...
TRPM4                 0.143   transient receptor potential cation channel, subfami...
TRPM5                 0.141   transient receptor potential cation channel, subfami...
TRPM3                 0.140   transient receptor potential cation channel, subfami...
TRPM3                 0.136   transient receptor potential cation channel, subfami...
TRPM8                 0.080   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfamil...
TRPC4                 0.017   transient receptor potential cation channel, subfam...
TRPC5                 0.015   transient receptor potential cation channel, subfamil...
TRPC4                 0.012   transient receptor potential cation channel, subfam...
TRPC7                 0.010   transient receptor potential cation channel, subfamil...
TRPC3                 0.010   transient receptor potential cation channel, subfam...
TRPC3                 0.010   transient receptor potential cation channel, subfamil...
TRPC6                 0.009   transient receptor potential cation channel, subfamil...
TRPV6                 0.009   transient receptor potential cation channel, subfami...
TRPV5                 0.008   transient receptor potential cation channel, subfami...
TRPC1                 0.007   transient receptor potential cation channel, subfamil...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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