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Search of human proteins with 239752742
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752742 PREDICTED: hypothetical protein [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752742 PREDICTED: hypothetical protein [Homo sapiens] 218 6e-58
gi|239747280 PREDICTED: hypothetical protein XP_002346418 [Homo ... 218 6e-58
gi|239741104 PREDICTED: hypothetical protein XP_002342091 [Homo ... 218 6e-58
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-05
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-05
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 43 5e-05
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 40 4e-04
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 40 5e-04
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 39 7e-04
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 39 0.001
gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo s... 39 0.001
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 39 0.001
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 39 0.001
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 38 0.002
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 38 0.002
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 38 0.002
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 38 0.002
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 37 0.003
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|52426743 cisplatin resistance-associated overexpressed protei... 37 0.003
gi|19923485 cisplatin resistance-associated overexpressed protei... 37 0.003
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.003
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 37 0.004
gi|148746195 trichohyalin [Homo sapiens] 36 0.006
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 36 0.006
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 36 0.008
>gi|239752742 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 218 bits (556), Expect = 6e-58
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP
Sbjct: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA
Sbjct: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
>gi|239747280 PREDICTED: hypothetical protein XP_002346418 [Homo
sapiens]
Length = 109
Score = 218 bits (556), Expect = 6e-58
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP
Sbjct: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA
Sbjct: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
>gi|239741104 PREDICTED: hypothetical protein XP_002342091 [Homo
sapiens]
Length = 109
Score = 218 bits (556), Expect = 6e-58
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP
Sbjct: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA
Sbjct: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 45.1 bits (105), Expect = 1e-05
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 13 GRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKE 72
G K + RG+ + K GGGG+++A G K+R+ + RR ++PR R++
Sbjct: 321 GGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPR--------RQK 372
Query: 73 NEARREKGTRRGPARGLRGPRRSGKNRLR-----ERRRARPA 109
A K G +GLR +R G R + RRRA+ A
Sbjct: 373 ASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKA 414
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 37 GGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSG 96
G +R+A+ KTR R ++ P+ G ++R+ + +K RRG G R G
Sbjct: 205 GRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVG 264
Query: 97 KNR 99
K+R
Sbjct: 265 KSR 267
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQ---ARGAGEKTRQTRHRRRE 58
+K + K G + G+ R+ K GGK + +RG G+K + + +
Sbjct: 223 KKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAA 282
Query: 59 EPRALRKGKETRKENEARREKGTRRGPARGLRGPR--RSGKNRLRERRRARPA 109
A R+G T E A + +G R + G + PR R GK R ++A A
Sbjct: 283 LAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKA 335
Score = 33.5 bits (75), Expect = 0.038
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R K+ R +AS + R GGG K+ R A + + R + PR + K
Sbjct: 364 RGKKPRRQKASAAGAKSR---GGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPR 420
Query: 74 EARREKGTRRGP--ARGLRGPRRSGKNRLRERRRARPA 109
+K RRGP A+ G RSG + + RRR + A
Sbjct: 421 GGGSKKPRRRGPKAAKSRGGKSRSGGGK-KPRRRGQKA 457
Score = 33.1 bits (74), Expect = 0.049
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 30 KRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGP-ARG 88
K K GG R G G+K R+ + R+ +A G E+R + + R+K + G +RG
Sbjct: 433 KAAKSRGGKSRS--GGGKKPRRRGQKARQ--KAAEAGAESRGDKKQGRQKASAAGTKSRG 488
Query: 89 LRGPRRSGKNRLRERRRARPA 109
SGKN R ++A A
Sbjct: 489 GGLKSHSGKNLWRRGQKAEAA 509
Score = 32.7 bits (73), Expect = 0.064
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 35 GGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPAR------- 87
GG ++A AG K+R + RR ++ + ++ EA+ G RG R
Sbjct: 170 GGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPK 229
Query: 88 ----GLRGPRRSGKNRLRERRRARPA 109
G + R GK ++RRR + A
Sbjct: 230 PAAGGAKSRRGGGKKPQKQRRRGQKA 255
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRL-KMGGGGKRQARGAGEKTRQTRHRRREE 59
+ +++ G + R++ Q +G +G R+ K G G + RG GE+ +
Sbjct: 59 LRRQKAAAGGKKARLRGQ-KGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLG 117
Query: 60 PRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
R G++ R+ + G+++ R + KNR ++A A
Sbjct: 118 GR----GRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAA 163
Score = 27.7 bits (60), Expect = 2.1
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 28/124 (22%)
Query: 3 KEEQIKAGPEGR-IKEQARGEASGMVVRKRLKMGGGGK------------------RQAR 43
+++ +AG E R K+Q R +AS + R GGG K +A
Sbjct: 458 RQKAAEAGAESRGDKKQGRQKASAAGTKSR---GGGLKSHSGKNLWRRGQKAEAAGEKAT 514
Query: 44 GAGEKTRQTRHRRREEP-----RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
AG K+R + RR++P ++ G ++R+ +A T G G + R G N
Sbjct: 515 AAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHG-GGGNKQSRGGGGN 573
Query: 99 RLRE 102
+ R+
Sbjct: 574 KPRQ 577
Score = 26.2 bits (56), Expect = 6.0
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 8 KAGPEGRIKEQARGEA---SGMVVRKRLKMGGGGKRQARGAGEKTR 50
K+ G K + G A SG GGGG ++ RG G K+R
Sbjct: 730 KSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSR 775
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 44.7 bits (104), Expect = 2e-05
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
K+E+ + R +E+ R G +K+ K GK + R E+ +Q + RR +E R
Sbjct: 37 KKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRK 96
Query: 63 LRK----------GKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+K G+ RK+ + R+E+ R + +R K R +ER+R +
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREK 151
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
+++++ K G+ +E+ R E +R K +R+ R +K R+ + R R E +
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREK-----ERRKRKKEKKKRERKQRGRRERK 115
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNR-LRERRRAR 107
++ KE +EN+ RRE+ ++ + R R+ K R RER+R +
Sbjct: 116 KKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKK 162
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 16 KEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEA 75
+E+ R E RKR K +R+ RG E+ ++ + RE R+ ++ +K +
Sbjct: 82 REKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKK 141
Query: 76 RREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+R K +R RG R +R K R +E R +
Sbjct: 142 KRRKERKREKERGKRERKR--KKRKKEEREKK 171
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
EKE + + + + + + RG ++R + K Q R K R+ + RR+E R
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENK-QRRERKRKKRRKKKRRKERKR 149
Query: 62 ALRKGKETRK----ENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+GK RK + E R +K R R R+ + R +ER++ R
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKER 199
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 29 RKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARG 88
++R K +++ + G++ R+ + R++EE +K + RKE + RE+ RR +
Sbjct: 137 KRRKKKRRKERKREKERGKRERKRKKRKKEERE--KKRERNRKERKKERERKERRERKKE 194
Query: 89 LRGPRRSGKNRLRERRRAR 107
+ RR K R ++R+ R
Sbjct: 195 RKKERRKKKERKKDRKTDR 213
Score = 35.8 bits (81), Expect = 0.008
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R KE+ E K K G K + + + + R R+R+E RK + ++
Sbjct: 36 RKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERR 95
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRER 103
+ ++EK R RG R ++ + + RER
Sbjct: 96 KRKKEKKKRERKQRGRRERKKKKERKERER 125
Score = 34.7 bits (78), Expect = 0.017
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
+++E+ K E R KE+ + + +K+ + G+R+ + E+ + R ++ R
Sbjct: 78 KRKEREKQRKERREKERRKRKKE----KKKRERKQRGRRERKKKKERKERERENKQRRER 133
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLR-GPRRSGKNRLRERRRAR 107
+K ++ ++ E +REK RG R R+ K RE++R R
Sbjct: 134 KRKKRRKKKRRKERKREK------ERGKRERKRKKRKKEEREKKRER 174
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
+ R + R+ R R RE+ R +GK+ +K+ + +RE+G R R R +R +
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRK-KRERGKERERKRKEREKQRK-ER 89
Query: 99 RLRERRRAR 107
R +ERR+ +
Sbjct: 90 REKERRKRK 98
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 47 EKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
++ + + RRE + R+ ++ RK ++EK R+ + RG R K + RE++R
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRK---KRERGKERERKRKEREKQR 86
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R KE+ R + G RKR K K++ R EK R+ + R++ R ++ +E +KE
Sbjct: 143 RRKERKREKERGKRERKRKKR----KKEER---EKKRERNRKERKKERERKERRERKKE- 194
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRERRRA 106
++E+ ++ + + R++ R R +
Sbjct: 195 -RKKERRKKKERKKDRKTDRQTDSQVFRPLRES 226
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 43.1 bits (100), Expect = 5e-05
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTR-QTRHRRREE 59
M++E + G EGR + + R+R + ++ AR E+ R + R R++E
Sbjct: 351 MDRERNRQTGREGRRQAE----------RERERERERDRQSAREREERERDRDRDRQKER 400
Query: 60 PRALRKGK----ETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
R K + ET K+ E +++ + RG RG ++ G+ R RER+ R A
Sbjct: 401 ERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQA 454
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 16 KEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEA 75
K Q R E RKR + +R+ E+ R+ R R RE R + +ET ++ E
Sbjct: 286 KRQRRTERDRETERKRER-----QRERERERERNRK-RERERERERERERQRETERDREK 339
Query: 76 RREKGTR--------RGPARGLRGPRRSGKNRLRERRRAR 107
RE+ + R G G R++ + R RER R R
Sbjct: 340 ERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDR 379
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 39 KRQARGAGEKTRQT-RHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGK 97
+RQ E+ RQT R R+R+ R +K +E K + RRE+ +R R S +
Sbjct: 150 ERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTED-RHSER 208
Query: 98 NRLRERRR 105
R RER R
Sbjct: 209 GRERERER 216
Score = 34.3 bits (77), Expect = 0.022
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 39 KRQARGAGEKTRQT-RHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGK 97
KR+ R ++ R+ RHR R+ R + ++T +E + +REK R R R +
Sbjct: 78 KRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGER 137
Query: 98 NR------LRERRRARPA 109
R RER R R A
Sbjct: 138 GRDRQTDGQRERERQRDA 155
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 38 GKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGK 97
G+ + R +T R R+ + R ++ E +E +A RE+ + R R R +
Sbjct: 209 GRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDR 268
Query: 98 NRLRERRR 105
+R R+RR+
Sbjct: 269 DRDRDRRQ 276
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVV---RKRLKMGGGGKRQARGAGEKTRQT---RHR 55
E++ Q K E R K+ R AS ++R + + + R E+ RQT R R
Sbjct: 231 ERDRQRKTERE-REKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQR 289
Query: 56 RREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R E R + +E ++E E RE+ +R R R + R+R + R
Sbjct: 290 RTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKER 341
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+E + + E + + + R+R K + R + R R R+ R
Sbjct: 213 ERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDR 272
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R+ KE ++ + +R++ T R + R+ + R RER R R
Sbjct: 273 D-RRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKR 317
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 39 KRQARGAGEKTRQTR-----HRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPR 93
KRQ ++ R+ R HR+R+ R ++ +E +E + RE+ +R R + R
Sbjct: 68 KRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKER 127
Query: 94 RSGKNRLRERRRAR 107
R ER R R
Sbjct: 128 ERETEREGERGRDR 141
Score = 32.3 bits (72), Expect = 0.084
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 47 EKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRA 106
+K R+ R +R+ R + +E R+E + R++ R R R +R R+R+R
Sbjct: 59 QKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQRE 118
Query: 107 R 107
+
Sbjct: 119 K 119
Score = 32.3 bits (72), Expect = 0.084
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
+RQ E+ RQT RE R K + +KE E E+ RG R G R +
Sbjct: 96 ERQRDREKERERQTD---RERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQ 152
Query: 99 RLRERRRAR 107
R E+ R R
Sbjct: 153 RDAEKERER 161
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 12/79 (15%)
Query: 39 KRQARGAGEKTRQT---------RHRRREEPR---ALRKGKETRKENEARREKGTRRGPA 86
KRQ E+ RQT R R RE R + R+ +E ++ + R+K R
Sbjct: 346 KRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTE 405
Query: 87 RGLRGPRRSGKNRLRERRR 105
+ G R + K R RE+ R
Sbjct: 406 KDRDGQRETEKQREREKDR 424
Score = 30.8 bits (68), Expect = 0.24
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 29 RKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARG 88
R+R K K + R + + R R+ + R + ++ KE E + ++ +R R
Sbjct: 115 RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERN 174
Query: 89 LRGPRRSGKNRL--RERRRAR 107
+ R KNR RER R R
Sbjct: 175 RQKEREREKNRQERRERERQR 195
Score = 30.0 bits (66), Expect = 0.42
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Query: 11 PEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGK--E 68
P R QA +A G + + +R+ R +T + R RRRE+ R ++ + E
Sbjct: 37 PRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRE 96
Query: 69 TRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+++ E RE+ T R + R +ER R +
Sbjct: 97 RQRDREKERERQT----------DRERDRQREKERNRQK 125
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETR----KENEARREKGTRRGPARGLRGPRR 94
+R + E+ RQ + R RE R +G++ + +E E +R+ R R+
Sbjct: 112 ERDRQREKERNRQ-KERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQ 170
Query: 95 SGKNRLRERRRAR 107
+ +NR +ER R +
Sbjct: 171 TERNRQKEREREK 183
Score = 26.9 bits (58), Expect = 3.5
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E++ + + E K + E R+R K + R +T R R R+ R
Sbjct: 302 ERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGR 361
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
R+ E +E E R++ + R R R +R +ER R
Sbjct: 362 EGRRQAERERERERERDRQSAREREERERDRDR---DRQKERER 402
Score = 25.8 bits (55), Expect = 7.9
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
EK+ K + E R+R + + + + +T + R R+
Sbjct: 84 EKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQT 143
Query: 62 ALRKGKETRKENEARREKGT----RRGPARGLRGPRRSGKNRLRERRRAR 107
++ +E +++ E RE+ T +R R + R KNR R R R
Sbjct: 144 DGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERER 193
Score = 25.8 bits (55), Expect = 7.9
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
+ RG + + E R + ++ +++ E REK R A R +
Sbjct: 204 RHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE 263
Query: 99 RLRERRRAR 107
R R+R R R
Sbjct: 264 RERDRDRDR 272
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 40.0 bits (92), Expect = 4e-04
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+E +I+ EG+ + ++ + KR + +++ RG EK + + RE
Sbjct: 40 EREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERE--- 96
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRG-PRRSGKNRLRERRRAR 107
RK + KEN+ EK R+ + RG + GK R R+ R R
Sbjct: 97 --RKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKR 141
Score = 39.7 bits (91), Expect = 5e-04
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
K+E+ + R KE GE +K K G ++ G++ + R+REE +
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKE----GKERERKEERKREERKE 146
Query: 63 LRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+ KE R++ R+E+ R G + R K R ++R R
Sbjct: 147 RERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRER 191
Score = 35.8 bits (81), Expect = 0.008
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E++E+ K E + +E+ + E RK K KR+ + GEK + + + R+E +
Sbjct: 134 ERKEERKR-EERKERERKKEEREKERERKERK-----KRERKQVGEKEEERKEKERKERK 187
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+ ++ RK+ R+E+ R + R+ + R +ER++ R
Sbjct: 188 KRERNRKERKKERERKERRER-------KKERKKKEERKKERQKDR 226
Score = 35.4 bits (80), Expect = 0.010
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
EK+E+ + EG KE+ R E RK + K++ R EK R+ + R++ E +
Sbjct: 119 EKKERGRTSKEG--KERERKEERKREERKERER----KKEER---EKERERKERKKRERK 169
Query: 62 ALRKGKETRKENEARREKGTRRGPA-------RGLRGPRRSGKNRLRERRRAR 107
+ + +E RKE E + K R R R R+ + + ER++ R
Sbjct: 170 QVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKER 222
Score = 35.4 bits (80), Expect = 0.010
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGE-KTRQTRHRRREEP 60
E+ ++ + E R KE+ R E +KR + G K + R E K R+ R R R+E
Sbjct: 142 EERKERERKKEEREKERERKER-----KKRERKQVGEKEEERKEKERKERKKRERNRKER 196
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNR-LRERRRAR 107
+ R+ KE R+ + R++K R+ + R K R RER+ +
Sbjct: 197 KKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERK 244
Score = 33.9 bits (76), Expect = 0.029
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
K E+ K R K++ +GE +R + +++ + EK ++ + ++E R
Sbjct: 70 KREREKERKRERGKKEKKGERKK---EERERKKRRREKENKEGEEKEKRKKKEKKERGRT 126
Query: 63 LRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
++GKE ++ E +RE+ R + R R K R ++R R
Sbjct: 127 SKEGKERERKEERKREERKERERKKEEREKERERKER---KKRER 168
Score = 31.2 bits (69), Expect = 0.19
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQT-RHRRREEP 60
+KEE+ K K++ R + ++ K K++ R E+ ++ R RRE
Sbjct: 150 KKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERK 209
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ +K +E +KE + R+ R + GK +ER++
Sbjct: 210 KERKKKEERKKERQKDRQTNWRE---------KERGKRERKERKK 245
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 57 REEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRER 103
RE R + KE +KE E+ R+K R R R K R RER
Sbjct: 39 REREREIETRKEGKKERESERKKERREREKR----KREREKERKRER 81
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 RKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARG 88
R+R K +++ R +T + R R+R+ R + +E K+ + R++ T R R
Sbjct: 56 RERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERN 115
Query: 89 LRGPRRSGKNRLRERRRAR 107
+G R K RER R R
Sbjct: 116 RKGGRERDKQTERERDRER 134
Score = 36.6 bits (83), Expect = 0.004
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 40 RQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNR 99
RQ + R+ RHR+R+ R + ++T +E E R+K R R R + + R
Sbjct: 23 RQRERENQTERENRHRQRDRHR--ERDRQTDREKERERQKERDRQRQRERETERETERQR 80
Query: 100 LRERRRAR 107
R+R+R R
Sbjct: 81 ERQRQRER 88
Score = 36.2 bits (82), Expect = 0.006
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 40 RQARGAGEKTRQT-----RHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRR 94
RQ E+ RQT R R++E R ++ +ET +E E +RE+ +R R + R
Sbjct: 38 RQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQRERKR--QTDRE 95
Query: 95 SGKNRLRERRR 105
K+R RER+R
Sbjct: 96 RDKDRDRERKR 106
Score = 32.0 bits (71), Expect = 0.11
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 39 KRQARGAGEKTRQT-----RHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPR 93
+R+ + E+ RQT + R RE R + +E ++ R+K T R R R
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 94 RSGKNRLRERRRAR 107
+ + R R+R R R
Sbjct: 139 QRERERQRQRERKR 152
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 55 RRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R+RE R +GKET +E + +RE+ + R ++R R+R R R
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQ---------TERENRHRQRDRHRER 46
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 29 RKRLKMGGG--GKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPA 86
R+R + GG K+ R + + R R RE R + +ET +E + E+ R+
Sbjct: 112 RERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKER 171
Query: 87 RGLRGPRRSGKNRLRERR 104
+ R R K + +RR
Sbjct: 172 KKERKKERKEKKKEEKRR 189
Score = 30.4 bits (67), Expect = 0.32
Identities = 21/102 (20%), Positives = 41/102 (40%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
+KE + E + + + R+R + + + R K R+R R
Sbjct: 59 QKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKG 118
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRER 103
+ K+T +E + RE+ +R R + R+ +R R+R
Sbjct: 119 GRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQR 160
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 36 GGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRS 95
GG +R + E+ R+ R R+R+ R ++ +E ++E + R++ R + R R
Sbjct: 118 GGRERDKQTERERDRE-RERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERK 176
Query: 96 GKNRLRERRRAR 107
+ + +++ R
Sbjct: 177 KERKEKKKEEKR 188
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKE- 72
R +E+ R G + + Q ++ RHR R+ K +E +KE
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62
Query: 73 -NEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ +RE+ T R R R+ + R +R R
Sbjct: 63 DRQRQRERETERETERQRERQRQRERKRQTDRER 96
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+++Q + + + Q + E R+R KR+ ++ + R++E +
Sbjct: 121 ERDKQTERERDRERERQRQRERERQRQRER-------KRETDRERQRWAEREERKKERKK 173
Query: 62 ALRKGKETRKENEARREKGTRR 83
+K ++ +K+ E RRE R+
Sbjct: 174 ERKKERKEKKKEEKRREDKKRK 195
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 39.3 bits (90), Expect = 7e-04
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 9 AGPEGRIKEQARGEASGMVVRKRLKM-------GGGGKRQARGAGEKTRQTRHRRREEPR 61
AG + K + RGE + K+L+ GGGGK+ A G+K R RRR +
Sbjct: 171 AGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPR----RRRGQKA 226
Query: 62 ALRKGKETRKENEARREKGTRRG-PARGLRGPRRSGKNRLRER 103
A +G +K R+K G +RG + P R GK + RER
Sbjct: 227 AKSRGGGDKK---LERQKAALTGVKSRGDKKPLRGGKKQ-RER 265
Score = 35.8 bits (81), Expect = 0.008
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
+E ++ P R Q A V R R + GGG ++ R G+K ++R ++PR
Sbjct: 107 RESWTRSAPR-RCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRG 165
Query: 63 LRKGKETRKENEARREKGTRRGPARG 88
+ K++ R +G R A G
Sbjct: 166 QKAAGAGAKKHRKPRRRGERAAAAGG 191
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 1 MEKEEQIKAGPEGR-IKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREE 59
+E+++ G + R K+ RG + K GGG + + A ++R R E+
Sbjct: 237 LERQKAALTGVKSRGDKKPLRGGKKQRERGQNTKSRGGGGEKPQKAAAAGAKSRGGRGEK 296
Query: 60 PRALRKGKETRKENE 74
P+ G+ + NE
Sbjct: 297 PQKAEAGQGQNRRNE 311
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 17 EQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRR-REEPRALRKGKETRKENEA 75
E RG+A G R+ + GG + G+ HRR R R +G E + E A
Sbjct: 919 EAERGKA-GDPHRRHVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPGEEGPEDKAERRA 977
Query: 76 RREKGTRRGPARGLRGPRR--SGKNRLRERRRARPA 109
R +G+R PARG G G R R R PA
Sbjct: 978 RHREGSR--PARGGEGEGEGPDGGERRRRHRHGAPA 1011
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGG--GGKRQARGAGEKTRQTRHRRREE 59
++ E + GP GR + E S L+ G G+ + AG+ R+ HR+
Sbjct: 887 QEAELSREGPYGRESDHHAREGS-------LEQPGFWEGEAERGKAGDPHRRHVHRQGGS 939
Query: 60 PRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
+ T + E RR + RR G GP + R R R +RPA
Sbjct: 940 RESRSGSPRTGADGEHRRHRAHRR---PGEEGPEDKAERRARHREGSRPA 986
Score = 30.0 bits (66), Expect = 0.42
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 16/74 (21%)
Query: 10 GPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKET 69
GPE + + +AR R GG G+ + GE+ R+ RH G
Sbjct: 968 GPEDKAERRARHREGSRPAR-----GGEGEGEGPDGGERRRRHRH-----------GAPA 1011
Query: 70 RKENEARREKGTRR 83
E +ARRE RR
Sbjct: 1012 TYEGDARREDKERR 1025
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 50 RQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
R+ RHR P +G+ + RR + PA RR K R RR+
Sbjct: 975 RRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPATYEGDARREDKERRHRRRK 1030
>gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo
sapiens]
Length = 2261
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 17 EQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRR-REEPRALRKGKETRKENEA 75
E RG+A G R+ + GG + G+ HRR R R +G E + E A
Sbjct: 920 EAERGKA-GDPHRRHVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPGEEGPEDKAERRA 978
Query: 76 RREKGTRRGPARGLRGPRR--SGKNRLRERRRARPA 109
R +G+R PARG G G R R R PA
Sbjct: 979 RHREGSR--PARGGEGEGEGPDGGERRRRHRHGAPA 1012
Score = 33.9 bits (76), Expect = 0.029
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGG--GGKRQARGAGEKTRQTRHRRREE 59
++ E + GP GR + E S L+ G G+ + AG+ R+ HR+
Sbjct: 888 QEAELSREGPYGRESDHHAREGS-------LEQPGFWEGEAERGKAGDPHRRHVHRQGGS 940
Query: 60 PRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
+ T + E RR + RR G GP + R R R +RPA
Sbjct: 941 RESRSGSPRTGADGEHRRHRAHRR---PGEEGPEDKAERRARHREGSRPA 987
Score = 30.0 bits (66), Expect = 0.42
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 16/74 (21%)
Query: 10 GPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKET 69
GPE + + +AR R GG G+ + GE+ R+ RH G
Sbjct: 969 GPEDKAERRARHREGSRPAR-----GGEGEGEGPDGGERRRRHRH-----------GAPA 1012
Query: 70 RKENEARREKGTRR 83
E +ARRE RR
Sbjct: 1013 TYEGDARREDKERR 1026
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 50 RQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
R+ RHR P +G+ + RR + PA RR K R RR+
Sbjct: 976 RRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPATYEGDARREDKERRHRRRK 1031
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 38.5 bits (88), Expect = 0.001
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
+E ++ P+ R Q G A V R R + GG K A GA + + RR++P A
Sbjct: 107 RESWTRSAPQ-RCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEPRRQKPAA 165
Query: 63 LRKGKETRKENEARREKGTRRGPARGLRG 91
K ++ R +G + PA+ G
Sbjct: 166 AGAKSRGGKSHKKPRRRGQKAAPAKNSGG 194
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 10 GPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR--ALRKGK 67
GP G +ARG + + R GGG R A AG + PR R+G
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
Query: 68 ETR---KENEARREKGTRRGPARGLR--GPRR 94
R E A R +G R PARG R PRR
Sbjct: 222 RRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 38.5 bits (88), Expect = 0.001
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 10 GPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR--ALRKGK 67
GP G +ARG + + R GGG R A AG + PR R+G
Sbjct: 162 GPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGM 221
Query: 68 ETR---KENEARREKGTRRGPARGLR--GPRR 94
R E A R +G R PARG R PRR
Sbjct: 222 RRRLGAGERPAPRPRGPPRAPARGARWLRPRR 253
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 38.5 bits (88), Expect = 0.001
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 25 GMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRR---EEPRALRKGKETRKENEARREKGT 81
G V+K+ K G ++ G K R+ + +R+ +EP+ RK KE +K E + K
Sbjct: 89 GTGVKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEPK-- 146
Query: 82 RRGPARGLRGPRR-SGKNRLRERR 104
++ A+ R PR SG +E+R
Sbjct: 147 QKDGAKKARKPREASGTKEAKEKR 170
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 38.1 bits (87), Expect = 0.002
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 13 GRIKEQARGEASGMVVRKRLKMGGGGKR--QARGAGEKTRQTRHRRREEPRAL-----RK 65
G K + RG+ + K GGGGK+ +AR G + R + RR +A +
Sbjct: 174 GGKKIRRRGQKAAAAGAK--SCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAGGEKA 231
Query: 66 GKETRKENEARREKGTRRGPARGLRGPRRSGKNR 99
GK+ R++ E R+K RRG G R K R
Sbjct: 232 GKKLRQQGEKGRKKPRRRGQKAAAAGGERCKKPR 265
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 4 EEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARG-----AGEKTRQTRHRRRE 58
E ++GP + + A S + + GGGGK+ RG AG K+R R R
Sbjct: 115 ESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRG 174
Query: 59 EPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
+ R+G++ G ++ G RR G +LR R + A
Sbjct: 175 GKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAA 225
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 13 GRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRK- 71
G+ A GE +G +R++ G G+++ R G+K R ++PR + + K
Sbjct: 220 GKKAAAAGGEKAGKKLRQQ---GEKGRKKPRRRGQKAAAAGGERCKKPRRQKAAAVSAKS 276
Query: 72 -ENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ RR + R A + P+R G+ + + R
Sbjct: 277 PKKPRRRVLNSARLGAESRKNPQRRGQKSMAAKSR 311
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 37.7 bits (86), Expect = 0.002
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRK---RLKMGGGGKRQARGAGEKTRQTRHRRRE 58
+K+E+ + R + + R S R+ R + K ++R + R+ R RE
Sbjct: 240 DKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRE 299
Query: 59 EPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R R +TR + + +EK + P + RRS ++ RERRR R
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRS-RSASRERRRRR 347
Score = 26.9 bits (58), Expect = 3.5
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 29 RKRLKMGGGGKRQARGAGEKTR---QTRHRRREEPRALRKGKETRKENEARREKGT---- 81
R+R K + +R G ++R +TR +++E+ R + + ARR +
Sbjct: 284 RRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRER 343
Query: 82 -RRGPARGLRGPR--RSGKNRL 100
RR G R P+ RS K +L
Sbjct: 344 RRRRSRSGTRSPKKPRSPKRKL 365
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 29 RKRLKMGGGGKRQARG-AGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPAR 87
+KR K K ++R + +K + TR + +E+ R K +E +E E REK RG +
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 415
Query: 88 GLRGPRRSGKNRLRERRRAR 107
R + + +E+ R R
Sbjct: 416 DRDKEREKDREKDKEKDRER 435
Score = 32.3 bits (72), Expect = 0.084
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTR-RGPARGLRGPRRSGK 97
+R+ EK R + + +E+ + + K+ KE + +R+K + R P R RRS +
Sbjct: 434 EREREKEHEKDRD-KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRS-R 491
Query: 98 NRLRERRRAR 107
+ RERRR R
Sbjct: 492 SSSRERRRRR 501
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/106 (16%), Positives = 44/106 (41%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
+ E+ K+ +++ + + ++R+K K + R + + R + ++ +
Sbjct: 360 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 419
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
K +E KE + RE+ R + K + RE+ R++
Sbjct: 420 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 465
Score = 28.9 bits (63), Expect = 0.93
Identities = 19/98 (19%), Positives = 40/98 (40%)
Query: 8 KAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGK 67
K + R + ++R + RK + K + + + + R + RE+ + K K
Sbjct: 356 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 415
Query: 68 ETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ KE E REK + R +++ +E+ +
Sbjct: 416 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQ 453
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 37.7 bits (86), Expect = 0.002
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 29 RKRLKMGGGGKRQARG-AGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPAR 87
+KR K K ++R + +K + TR + +E+ R K +E +E E REK RG +
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 299
Query: 88 GLRGPRRSGKNRLRERRRAR 107
R + + +E+ R R
Sbjct: 300 DRDKEREKDREKDKEKDRER 319
Score = 32.3 bits (72), Expect = 0.084
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTR-RGPARGLRGPRRSGK 97
+R+ EK R + + +E+ + + K+ KE + +R+K + R P R RRS +
Sbjct: 318 EREREKEHEKDRD-KEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRS-R 375
Query: 98 NRLRERRRAR 107
+ RERRR R
Sbjct: 376 SSSRERRRRR 385
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/106 (16%), Positives = 44/106 (41%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
+ E+ K+ +++ + + ++R+K K + R + + R + ++ +
Sbjct: 244 KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDK 303
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
K +E KE + RE+ R + K + RE+ R++
Sbjct: 304 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 349
Score = 28.9 bits (63), Expect = 0.93
Identities = 19/98 (19%), Positives = 40/98 (40%)
Query: 8 KAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGK 67
K + R + ++R + RK + K + + + + R + RE+ + K K
Sbjct: 240 KKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNK 299
Query: 68 ETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ KE E REK + R +++ +E+ +
Sbjct: 300 DRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQ 337
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R+ + R E ++ L+ G R+A A + R+ R R E A R+ ++ +
Sbjct: 385 RVHAKQRREREEREKQRALEQG----RRAWAAQVEERRGRRGREEREAARRRQRQYERSE 440
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRE 102
E RRE R+G R R R + ++RLR+
Sbjct: 441 ERRRELAERQGLLRRERAERAAREDRLRK 469
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
+++E+ +K EG + + R E + R+R + K++ G Q + +RE
Sbjct: 470 LQQEQNLKQREEGLQEGRERAE---QIRRERAQRAARAKQRQEG------QLQREKRELS 520
Query: 61 RALRKGKETRKENEARREKGTRRG 84
RA R E + R+++ R G
Sbjct: 521 RAERARHEALLQGRTRQQRQEREG 544
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 4 EEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARG-----AGEKTRQTRHRRRE 58
E ++GP + + A S + + GGGGK+ RG AG K+R R R
Sbjct: 115 ESSTRSGPRRCLSQDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRG 174
Query: 59 EPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRARPA 109
+ R+G++ G ++ G RR G +LR R + A
Sbjct: 175 GKKIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRRRGKKAAA 225
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R+ + R E ++ L+ G R+A A + R+ R R E A R+ ++ +
Sbjct: 387 RVHAKQRREREEREKQRALEQG----RRAWAAQVEERRGRRGREEREAARRRQRQYERSE 442
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRE 102
E RRE R+G R R R + ++RLR+
Sbjct: 443 ERRRELAERQGLLRRERAERAAREDRLRK 471
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
+++E+ +K EG + + R E + R+R + K++ G Q + +RE
Sbjct: 472 LQQEQNLKQREEGLQEGRERAE---QIRRERAQRAARAKQRQEG------QLQREKRELS 522
Query: 61 RALRKGKETRKENEARREKGTRRG 84
RA R E + R+++ R G
Sbjct: 523 RAERARHEALLQGRTRQQRQEREG 546
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 37.4 bits (85), Expect = 0.003
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R+ + R E ++ L+ G R+A A + R+ R R E A R+ ++ +
Sbjct: 387 RVHAKQRREREEREKQRALEQG----RRAWAAQVEERRGRRGREEREAARRRQRQYERSE 442
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRE 102
E RRE R+G R R R + ++RLR+
Sbjct: 443 ERRRELAERQGLLRRERAERAAREDRLRK 471
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
+++E+ +K EG + + R E + R+R + K++ G Q + +RE
Sbjct: 472 LQQEQNLKQREEGLQEGRERAE---QIRRERAQRAARAKQRQEG------QLQREKRELS 522
Query: 61 RALRKGKETRKENEARREKGTRRG 84
RA R E + R+++ R G
Sbjct: 523 RAERARHEALLQGRTRQQRQEREG 546
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGG--GGKRQARGAGEKTRQTRHRRREE 59
E+E + + E R KE+AR R R + +R +R K ++R RRR
Sbjct: 267 ERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSR 326
Query: 60 PRALRKGKE-TRKENEAR-REKGTRRGPARGLRGPRRSGKNRLRERRR 105
R R+ + R E + R R + RR +R + + K+R RE+ R
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDR 374
Score = 35.8 bits (81), Expect = 0.008
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 6 QIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRK 65
+IKA E +KE+ R +RLK ++Q R EK R+ RE R R+
Sbjct: 222 KIKATVE-ELKEKLRKRTEEPDRDERLKK----EKQEREEREKEREREREERERKR--RR 274
Query: 66 GKETRKENEARREKGTRRGPARGLRGPRRSGK----------NRLRERRRAR 107
+E R++ AR + +R +R R S + +R RERRR+R
Sbjct: 275 EEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSR 326
Score = 30.8 bits (68), Expect = 0.24
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTR---QTRHRRR 57
++KE+Q + E R KE+ R E ++R + K +AR + R ++RH R
Sbjct: 247 LKKEKQER---EEREKERER-EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 58 EEPRALRKGKETRKEN--EARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R + ++ ++ E RR + R +R R ++R R+RRR++
Sbjct: 303 TSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSK 354
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGG--GGKRQARGAGEKTRQTRHRRREE 59
E+E + + E R KE+AR R R + +R +R K ++R RRR
Sbjct: 267 ERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSR 326
Query: 60 PRALRKGKE-TRKENEAR-REKGTRRGPARGLRGPRRSGKNRLRERRR 105
R R+ + R E + R R + RR +R + + K+R RE+ R
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDR 374
Score = 35.8 bits (81), Expect = 0.008
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 6 QIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRK 65
+IKA E +KE+ R +RLK ++Q R EK R+ RE R R+
Sbjct: 222 KIKATVE-ELKEKLRKRTEEPDRDERLKK----EKQEREEREKEREREREERERKR--RR 274
Query: 66 GKETRKENEARREKGTRRGPARGLRGPRRSGK----------NRLRERRRAR 107
+E R++ AR + +R +R R S + +R RERRR+R
Sbjct: 275 EEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSR 326
Score = 30.8 bits (68), Expect = 0.24
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTR---QTRHRRR 57
++KE+Q + E R KE+ R E ++R + K +AR + R ++RH R
Sbjct: 247 LKKEKQER---EEREKERER-EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSR 302
Query: 58 EEPRALRKGKETRKEN--EARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R + ++ ++ E RR + R +R R ++R R+RRR++
Sbjct: 303 TSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSK 354
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+EE+ EG+ KE+ + + +K+ K K + ++ R+ + ++ EE R
Sbjct: 20 EEEEE----KEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEER 75
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+ +E ++ E +E+G RR + R + + + RR+ +
Sbjct: 76 EEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTK 121
Score = 30.4 bits (67), Expect = 0.32
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
K++ + E+T +T EE + K KE RKE +EK + + K
Sbjct: 3 KKKKKKETEETEETEETEEEEEKE-GKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61
Query: 99 RLRERRRAR 107
R R+R++ +
Sbjct: 62 RKRKRKKKK 70
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 36.6 bits (83), Expect = 0.004
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 30 KRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALR-------KGKETRKENEARREKGTR 82
K+L+ G K + R EK R+ R R RE R R + +E KE E RE+
Sbjct: 289 KKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERD 348
Query: 83 RGPARGLRGPRRSGKNRLRERRRAR 107
R R R + R R+R R R
Sbjct: 349 RDRDRTKERDRDRDRERDRDRDRER 373
Score = 34.7 bits (78), Expect = 0.017
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQT-RHRRREEPR 61
+EE+ K E + E+ R E R+R + +R+ EK ++ R R R+ R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDR 351
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
K ++ ++ E R++ R R R K+R RER R R
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER 397
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 29 RKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARG 88
R R + K ++R + + R R RE R + +E +E E RE+ R +
Sbjct: 369 RDRERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKD 428
Query: 89 LRGPRRSGKNRLRERRR 105
+ R + ERR+
Sbjct: 429 KKRDREEDEEDAYERRK 445
Score = 31.2 bits (69), Expect = 0.19
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAG-EKTRQT---RHRR 56
+EKE + + R +E+ E R+R K + + R ++T++ R R
Sbjct: 305 IEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRE 364
Query: 57 REEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R+ R + + K+ REK R R R + R RER R R
Sbjct: 365 RDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERER 415
Score = 30.4 bits (67), Expect = 0.32
Identities = 22/104 (21%), Positives = 41/104 (39%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+E + + E +++ E R R K + + R ++ R ++ R
Sbjct: 324 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSR 383
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+ K ++ +E E RE+ R R R + R RER +
Sbjct: 384 SREKSRDREREREREREREREREREREREREREREREREREREK 427
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Query: 2 EKEEQIKAGPEGRIKEQARG-EASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEP 60
E+E + + R +E+ R E R+R + K + R + + R R R
Sbjct: 317 ERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSD 376
Query: 61 RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R + + K + RE+ R R R + R RER R R
Sbjct: 377 RNKDRSRSREKSRDRERERERERERERERERERERERERERERERER 423
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
+ + R + R++ R R + +E +E E RE+ R R R +
Sbjct: 363 RERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERE 422
Query: 99 RLRERRRAR 107
R RE+ + R
Sbjct: 423 REREKDKKR 431
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 36.2 bits (82), Expect = 0.006
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 1 MEKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKR--------QARGAGEKTRQT 52
+++EE+ + + R K+Q + + + LK+ +R Q R E+ R+
Sbjct: 458 LKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQ 517
Query: 53 RHRRREEP----RALRKGKETRKENEARREKGTRRGPARGLRGPRRSGK-NRLRERRR 105
R +R+EE + LR ++ R+E E RRE+ +R + L RR + R +E RR
Sbjct: 518 RLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERR 575
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+EEQ++ ++ + + E ++RL+ ++Q R E+ R+ + R E +
Sbjct: 273 EEEEQLRKLERQELRRERQEEEQQ---QQRLRR----EQQLRRKQEEERREQQEERREQQ 325
Query: 62 ALRKGKETRKENEARREKGTRR 83
R+ +E R+E + RRE+ RR
Sbjct: 326 ERREQQEERREQQLRREQEERR 347
Score = 32.7 bits (73), Expect = 0.064
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
+E+Q++ E R ++Q R E ++L+ +R+ + + + R ++ +
Sbjct: 335 REQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQ 394
Query: 63 LRKGKETRKENEARREKGTRR 83
LR+ ++ R+E + RRE+ RR
Sbjct: 395 LRREQQLRREQQLRREQQLRR 415
Score = 30.4 bits (67), Expect = 0.32
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKR-QARGAGEKTRQTRHRRREEP 60
E+ EQ+ E + EQ R E +RLK +R Q E+ RQ R +R +E
Sbjct: 544 ERREQLLKREEEKRLEQERRE-------QRLKREQEERRDQLLKREEERRQQRLKREQEE 596
Query: 61 RA---LRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
R L++ + R E E RRE+ +R R + ERR+
Sbjct: 597 RLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQ 644
Score = 30.0 bits (66), Expect = 0.42
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHR----RR 57
E+E+ + P+ + + Q E + R+ L+ + Q + + +Q R + RR
Sbjct: 256 EEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERR 315
Query: 58 EEPRALRKGKETRKENEARREKGTRR-GPARGLRGPRRSGKNRLRERRRAR 107
E+ R+ +E R++ E RRE+ RR R + RR + RE++ R
Sbjct: 316 EQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRR 366
Score = 30.0 bits (66), Expect = 0.42
Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+++Q + E +++ + E +R + +++ R + R+ RR ++ R
Sbjct: 293 EEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLR 352
Query: 62 ALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
R+ +E R+E + RRE+ R + R + + +LR ++ R
Sbjct: 353 --REQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLR 396
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 3 KEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRA 62
+E+Q++ E +EQ + ++L+ ++Q R + R+ + RR ++
Sbjct: 360 REQQLRREQEEERREQQLRREQQLRREQQLRR----EQQLRREQQLRREQQLRREQQ--- 412
Query: 63 LRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
LR+ ++ R+E + RRE+ R + + R R +E RR
Sbjct: 413 LRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERR 455
Score = 29.6 bits (65), Expect = 0.54
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 2 EKEEQIKAGPEGRIKE---QARGEASGM---VVRKRLKMGGGGKRQARGAGEKTRQTRHR 55
E++EQ + + RI + Q EA V + K G +RQ + + R++ +
Sbjct: 688 EEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQ 747
Query: 56 RREEPRALRKGKETRK--------ENEARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
+EE RA R+ +E + + E + E+G +R AR +R + R ER++
Sbjct: 748 WQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQ 805
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRK----ENEARREKGTRRGPARGLRGPRR 94
KR+ + +K R+ ++EE + LR+ +E R+ E + R++ ++ + LR R
Sbjct: 980 KRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREERE 1039
Query: 95 SGKNRLRERRR 105
K RL+ER R
Sbjct: 1040 --KRRLQERER 1048
Score = 27.7 bits (60), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 2 EKEEQIKAGPEGRIKE----QARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRR 57
E+E+ ++ PE R ++ Q R E ++L KR+ + + R+ ++
Sbjct: 1089 EEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQ 1148
Query: 58 EEPRALRKGKETRKENEARRE 78
EE + LR+ E R+ E R+
Sbjct: 1149 EEEQLLREEPEKRRRQELERQ 1169
Score = 27.7 bits (60), Expect = 2.1
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPR 61
E+E+ ++ G E +++ Q R RK + +RQ R + + RR+E R
Sbjct: 1671 EEEQLLQEGEEQQLRRQERD-------RKFREEEQQLRRQERERKFLQEEQQLRRQELER 1723
Query: 62 ALRKGKETRKENE----ARREKGTRRGPARGLRGPRRSGKNRLRERRR 105
R+ ++ R+E E R+E+ + LR R + R +ER R
Sbjct: 1724 KFREEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDR 1771
Score = 26.6 bits (57), Expect = 4.6
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 2 EKEEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRR----- 56
++E+Q + P R E+ G+ +++ + G+ Q+ ++ R RR
Sbjct: 115 QEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQRDRQRRDEELW 174
Query: 57 --------REEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
REE RA + ++ K +E + R L RR G+ +++RR R
Sbjct: 175 RQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRER 233
Score = 26.2 bits (56), Expect = 6.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRAL----RKGKETRKENEARREKGTRRGPARGLRGPRR 94
K+Q + E+ R+ R + EE R+ ++ R+E E RRE+ +R R
Sbjct: 473 KQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQRL 532
Query: 95 SGKNRLRERRRAR 107
+ +LR + R
Sbjct: 533 RSEQQLRREQEER 545
Score = 26.2 bits (56), Expect = 6.0
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 39 KRQARGAGEKTRQTRHR---RREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRS 95
+R+ R E+ RQ R ++EE + LR+ +E R+ E RE+ R+ + +
Sbjct: 917 EREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQE--RERQYRKDKKLQQKEEQLL 974
Query: 96 GKNRLRERRRAR 107
G+ + RR+ R
Sbjct: 975 GEEPEKRRRQER 986
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 39 KRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGKN 98
KR+ R + E+ + R R E+ R ++ R+E + +E+ P R R+ +
Sbjct: 1308 KRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQER--EEQPLRRQERDRKFREE 1365
Query: 99 RLRERRRAR 107
LR + + R
Sbjct: 1366 ELRHQEQGR 1374
Score = 25.8 bits (55), Expect = 7.9
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 39 KRQARGAGEKTRQTRHR---RREEPRALRKGKETRKENEA----RREKGTRRGPARGLRG 91
+R+ R E+ RQ R ++EE + L + +ETR+ E R+E+ ++ + LR
Sbjct: 1037 EREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLRE 1096
Query: 92 PRRSGKNRLRERR 104
+ + RER+
Sbjct: 1097 EPEKRRRQERERQ 1109
Score = 25.8 bits (55), Expect = 7.9
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 1 MEKEEQIKAGPEGR------IKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRH 54
+++EE+ G E ++ Q R E ++L KR+ + + R+
Sbjct: 1056 LQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEE 1115
Query: 55 RRREEPRALRKGKETRKENEARRE 78
++EE + LR+ +E R+ E R+
Sbjct: 1116 LQQEEEQLLREEREKRRRQELERQ 1139
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 36.2 bits (82), Expect = 0.006
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 14 RIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKEN 73
R KE+ R E ++R K + RG + ++R R R R+ R K R++
Sbjct: 297 REKERQRLEREA---KEREKERRRSRSIDRGLERRRSRSRERHRSRSRS-RDRKGDRRDR 352
Query: 74 EARREKGTRRGPARGLRGPRRSGKNRLRERRRAR 107
+ REK RG R + G R +ER R+R
Sbjct: 353 DREREKENERGRRRDRDYDKERGNEREKERERSR 386
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 29 RKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTR-----R 83
R+R K G+R+ R ++ R + RE R K + +R E E ++ K + R
Sbjct: 354 REREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHR 413
Query: 84 GPARGLRGPRRSGKNRLRERR 104
R + ++ ++R RER+
Sbjct: 414 DDKRDSKKEKKHSRSRSRERK 434
Score = 31.2 bits (69), Expect = 0.19
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 4 EEQIKAGPEGRIKEQARG-EASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREE--- 59
++QIK P K+ G E V +R R + ++R H R
Sbjct: 230 DQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSS 289
Query: 60 --PRALRKGKETRK-ENEAR-REKGTRRGPA--RGLRGPRRSGKNRLRERRRAR 107
R L + KE ++ E EA+ REK RR + RGL R + R R R R+R
Sbjct: 290 SFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSR 343
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 38 GKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREK 79
G R+ R + R RRR+ +G E KE E RE+
Sbjct: 347 GDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRER 388
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/88 (18%), Positives = 34/88 (38%)
Query: 16 KEQARGEASGMVVRKRLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEA 75
K+ +R + R R + GKR + EK+ + ++ +E+ + + +
Sbjct: 423 KKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSV 482
Query: 76 RREKGTRRGPARGLRGPRRSGKNRLRER 103
+ K P++ R K R +R
Sbjct: 483 EKSKKREHSPSKEKSRKRSRSKERSHKR 510
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 35.8 bits (81), Expect = 0.008
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 31 RLKMGGGGKRQARGAGEKTRQTRHRRREEPRALRKGKETRKENEARREKGTRRGPAR-GL 89
R + G+ +R R +R ++ R+ + ++ R+E R+K R R L
Sbjct: 9 RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRL 68
Query: 90 RGPRRSGKNRLRERRRAR 107
R R ++R RERRR+R
Sbjct: 69 RRSRSRERDRSRERRRSR 86
Score = 34.3 bits (77), Expect = 0.022
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 39 KRQARGAGEKTR-QTRHRRREEPRALRKGKETRKENEARREKGTRRGPARGLRGPRRSGK 97
KR RG ++R + R RRRE R+ K + + +R K RR +R R +
Sbjct: 30 KRSKRGDDRRSRSRDRDRRRERSRSRDK-----RRSRSRDRKRLRRSRSRERDRSRERRR 84
Query: 98 NRLRERRRAR 107
+R R+RRR+R
Sbjct: 85 SRSRDRRRSR 94
Score = 32.0 bits (71), Expect = 0.11
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 4 EEQIKAGPEGRIKEQARGEASGMVVRKRLKMGGGGKRQARGAGEK-TRQTRHRRREEPRA 62
+++ K G + R + + R R+R + KR++R K R++R R R+ R
Sbjct: 29 DKRSKRGDDRRSRSRDRD-------RRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRE 81
Query: 63 LRKGKETRKENEARREKGTR-RGPARGLRGPRRSGKNRLRER 103
R+ + + R +G R R + G + + ++R +E+
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEK 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,619,479
Number of Sequences: 37866
Number of extensions: 212088
Number of successful extensions: 2694
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 1091
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.