BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239752655 PREDICTED: hypothetical protein [Homo sapiens] (249 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752655 PREDICTED: hypothetical protein [Homo sapiens] 530 e-151 gi|239747208 PREDICTED: hypothetical protein [Homo sapiens] 530 e-151 gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] 528 e-150 gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 106 2e-23 gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 106 2e-23 gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 106 2e-23 gi|153252110 ring finger protein 183 [Homo sapiens] 75 7e-14 gi|27436877 tripartite motif-containing 59 [Homo sapiens] 53 3e-07 gi|30794216 tripartite motif-containing 56 [Homo sapiens] 49 3e-06 gi|32454739 tripartite motif-containing 3 [Homo sapiens] 49 4e-06 gi|32454737 tripartite motif-containing 3 [Homo sapiens] 49 4e-06 gi|27734873 ring finger protein 152 [Homo sapiens] 49 4e-06 gi|40255283 NHL repeat containing 1 [Homo sapiens] 49 5e-06 gi|119220603 ring finger protein 208 [Homo sapiens] 49 5e-06 gi|22749455 ring finger protein 182 [Homo sapiens] 48 7e-06 gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 47 1e-05 gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 47 1e-05 gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 47 2e-05 gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 47 2e-05 gi|226442736 ring finger protein 222 [Homo sapiens] 46 3e-05 gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens] 46 3e-05 gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens] 46 3e-05 gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens] 46 3e-05 gi|9506663 ring finger protein 186 [Homo sapiens] 46 3e-05 gi|153791514 tripartite motif-containing 32 [Homo sapiens] 45 5e-05 gi|153792582 tripartite motif-containing 32 [Homo sapiens] 45 5e-05 gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 45 8e-05 gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens] 45 8e-05 gi|74027251 tripartite motif-containing 33 protein isoform beta ... 44 1e-04 gi|74027249 tripartite motif-containing 33 protein isoform alpha... 44 1e-04 >gi|239752655 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 530 bits (1365), Expect = e-151 Identities = 249/249 (100%), Positives = 249/249 (100%) Query: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN Sbjct: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 Query: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ Sbjct: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 Query: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR Sbjct: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 Query: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA Sbjct: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 Query: 241 SPLGPLTDN 249 SPLGPLTDN Sbjct: 241 SPLGPLTDN 249 >gi|239747208 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 530 bits (1365), Expect = e-151 Identities = 249/249 (100%), Positives = 249/249 (100%) Query: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN Sbjct: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 Query: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ Sbjct: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 Query: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR Sbjct: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 Query: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA Sbjct: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 Query: 241 SPLGPLTDN 249 SPLGPLTDN Sbjct: 241 SPLGPLTDN 249 >gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] Length = 249 Score = 528 bits (1361), Expect = e-150 Identities = 248/249 (99%), Positives = 248/249 (99%) Query: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN Sbjct: 1 MSSGQQVWHTAVPPPRRSSSIASMPRSPSSAGSPRSPGTPGSERVASPLECSICFSGYDN 60 Query: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ Sbjct: 61 IFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQ 120 Query: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPP PARDPAPR Sbjct: 121 LQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPAPARDPAPR 180 Query: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA Sbjct: 181 RGRLARCWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTAA 240 Query: 241 SPLGPLTDN 249 SPLGPLTDN Sbjct: 241 SPLGPLTDN 249 >gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sapiens] Length = 329 Score = 106 bits (264), Expect = 2e-23 Identities = 86/243 (35%), Positives = 106/243 (43%), Gaps = 40/243 (16%) Query: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64 S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK Sbjct: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77 Query: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121 PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L Sbjct: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134 Query: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 AR P + L +P P PG + P PP+ P R Sbjct: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187 Query: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239 R LA W LV+A L++ + + A +G PPRP + A Sbjct: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240 Query: 240 ASP 242 +P Sbjct: 241 PAP 243 >gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sapiens] Length = 329 Score = 106 bits (264), Expect = 2e-23 Identities = 86/243 (35%), Positives = 106/243 (43%), Gaps = 40/243 (16%) Query: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64 S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK Sbjct: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77 Query: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121 PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L Sbjct: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134 Query: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 AR P + L +P P PG + P PP+ P R Sbjct: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187 Query: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239 R LA W LV+A L++ + + A +G PPRP + A Sbjct: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240 Query: 240 ASP 242 +P Sbjct: 241 PAP 243 >gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sapiens] Length = 329 Score = 106 bits (264), Expect = 2e-23 Identities = 86/243 (35%), Positives = 106/243 (43%), Gaps = 40/243 (16%) Query: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64 S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK Sbjct: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77 Query: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121 PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L Sbjct: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134 Query: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180 AR P + L +P P PG + P PP+ P R Sbjct: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187 Query: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239 R LA W LV+A L++ + + A +G PPRP + A Sbjct: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240 Query: 240 ASP 242 +P Sbjct: 241 PAP 243 >gi|153252110 ring finger protein 183 [Homo sapiens] Length = 192 Score = 74.7 bits (182), Expect = 7e-14 Identities = 61/184 (33%), Positives = 84/184 (45%), Gaps = 26/184 (14%) Query: 50 ECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP 109 EC +C++ ++N F TPK L C H FC+ECLA L+ P R + CP CRQPT V Sbjct: 12 ECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVTPARR----RLLCPLCRQPT-VLA 66 Query: 110 AGAPALCTSRQLQARMPAHLRRE-EPVWLEGTKLCCQPLPTTPG--REPGFVCVDVGLSK 166 +G P T M A LR E V LEG +LC + P + R+P +D+G + Sbjct: 67 SGQPV--TDLPTDTAMLALLRLEPHHVILEGHQLCLKDQPKSRYFLRQPQVYTLDLG-PQ 123 Query: 167 PAEPPVPARDPA----------PRRGRLARCWA----RCRDWRRMALVSALLLMLFCVAL 212 P P D A P L C+ R + ++S LL++F + Sbjct: 124 PGGQTGPPPDTASATVSTPILIPSHHSLRECFRNPQFRIFAYLMAVILSVTLLLIFSI-F 182 Query: 213 WPVQ 216 W Q Sbjct: 183 WTKQ 186 >gi|27436877 tripartite motif-containing 59 [Homo sapiens] Length = 403 Score = 52.8 bits (125), Expect = 3e-07 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQP---VGRPGGEAVPCPFCRQPT 105 L C IC+S IF+ P+ L C+H FC CL + A + RP + CP CR T Sbjct: 8 LTCPICYS----IFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSIT 63 Query: 106 AVPPAGAPALCTSRQLQARMPAHLRREEP 134 + P G +L + L+A + + + + P Sbjct: 64 EIAPTGIESLPVNFALRAIIEKYQQEDHP 92 >gi|30794216 tripartite motif-containing 56 [Homo sapiens] Length = 755 Score = 49.3 bits (116), Expect = 3e-06 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 12/70 (17%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108 L C IC + PK L C H +C +CLA+LA G V CP CR+ VP Sbjct: 19 LACKICLEQ----LRAPKTLPCLHTYCQDCLAQLA--------DGGRVRCPECRETVPVP 66 Query: 109 PAGAPALCTS 118 P G + T+ Sbjct: 67 PEGVASFKTN 76 >gi|32454739 tripartite motif-containing 3 [Homo sapiens] Length = 744 Score = 48.9 bits (115), Expect = 4e-06 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Query: 36 SPGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEA 95 SPG L CSIC Y + PK L C H FC CL AQ + Sbjct: 7 SPGPEVQPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL------T 56 Query: 96 VPCPFCRQPTAVPPAGAPALCTSRQLQARMPA 127 + CP CRQ + +P G AL + + + M A Sbjct: 57 LSCPVCRQTSILPEQGVSALQNNFFISSLMEA 88 >gi|32454737 tripartite motif-containing 3 [Homo sapiens] Length = 744 Score = 48.9 bits (115), Expect = 4e-06 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Query: 36 SPGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEA 95 SPG L CSIC Y + PK L C H FC CL AQ + Sbjct: 7 SPGPEVQPMDKQFLVCSICLDRY----QCPKVLPCLHTFCERCLQNYIPAQSL------T 56 Query: 96 VPCPFCRQPTAVPPAGAPALCTSRQLQARMPA 127 + CP CRQ + +P G AL + + + M A Sbjct: 57 LSCPVCRQTSILPEQGVSALQNNFFISSLMEA 88 >gi|27734873 ring finger protein 152 [Homo sapiens] Length = 203 Score = 48.9 bits (115), Expect = 4e-06 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Query: 47 SPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTA 106 S LEC ICF+ Y + PK L C H C CL ++ +Q + V CP+CR T Sbjct: 8 SLLECQICFNYYSPR-RRPKLLDCKHTCCSVCLQQMRTSQ-------KDVRCPWCRGVTK 59 Query: 107 VPPAGAPALCTS--RQLQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVG 163 +PP + + L H PV+++ C LP +E + D+G Sbjct: 60 LPPGFSVSQLPDDPEVLAVIAIPHTSEHTPVFIKLPSNGCYMLPLPISKERALLPGDMG 118 >gi|40255283 NHL repeat containing 1 [Homo sapiens] Length = 395 Score = 48.5 bits (114), Expect = 5e-06 Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 43 ERVASPLECSICFSGYDNIF-KTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFC 101 E S LEC +CF + + + P+ LSC HV CL C+A LA P A+ CPFC Sbjct: 18 EAEISLLECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALA------HPRTLALECPFC 71 Query: 102 RQ 103 R+ Sbjct: 72 RR 73 >gi|119220603 ring finger protein 208 [Homo sapiens] Length = 261 Score = 48.5 bits (114), Expect = 5e-06 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 26/135 (19%) Query: 9 HTAVPP--PRRSSSIASMPR--------------SPSSAGSPRSPGTPGSERVASPLECS 52 HT P PR+ SS PR P + S S G PLEC Sbjct: 90 HTPPLPRRPRKGSSELGFPRVAPEDEVIVNQYVIRPGPSASAASSAAAGE-----PLECP 144 Query: 53 ICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAV-PPAG 111 C Y+ + P+ LSC H C +CL L + P + + CP CR+ T + G Sbjct: 145 TCGHSYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYK----FISCPTCRRETVLFTDYG 200 Query: 112 APALCTSRQLQARMP 126 AL + + +R+P Sbjct: 201 LAALAVNTSILSRLP 215 >gi|22749455 ring finger protein 182 [Homo sapiens] Length = 247 Score = 48.1 bits (113), Expect = 7e-06 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 37 PGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAV 96 P + + LEC IC++ Y+ + PK L C H C +CL ++ G + Sbjct: 6 PEDTAESQASDELECKICYNRYNLKQRKPKVLECCHRVCAKCLYKII---DFGDSPQGVI 62 Query: 97 PCPFCRQPTAVP 108 CPFCR T +P Sbjct: 63 VCPFCRFETCLP 74 >gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] Length = 744 Score = 47.4 bits (111), Expect = 1e-05 Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108 L CSIC Y N PK L C H FC CL A + + CP CRQ + +P Sbjct: 21 LICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL------TLSCPVCRQTSILP 70 Query: 109 PAGAPAL 115 G AL Sbjct: 71 EKGVAAL 77 >gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] Length = 771 Score = 47.4 bits (111), Expect = 1e-05 Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108 L CSIC Y N PK L C H FC CL A + + CP CRQ + +P Sbjct: 48 LICSICLERYKN----PKVLPCLHTFCERCLQNYIPAHSL------TLSCPVCRQTSILP 97 Query: 109 PAGAPAL 115 G AL Sbjct: 98 EKGVAAL 104 >gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo sapiens] Length = 500 Score = 46.6 bits (109), Expect = 2e-05 Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 11/78 (14%) Query: 42 SERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFC 101 +E + L C IC + F+ P + C H FC CL R A PGG PCP C Sbjct: 3 AEDIQEELTCPICL----DYFQDPVSIECGHNFCRGCLHRNWA------PGGGPFPCPEC 52 Query: 102 RQPTAVPPAGAPALCTSR 119 R P+A P A P +R Sbjct: 53 RHPSA-PAALRPNWALAR 69 >gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sapiens] Length = 474 Score = 46.6 bits (109), Expect = 2e-05 Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 11/78 (14%) Query: 42 SERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFC 101 +E + L C IC + F+ P + C H FC CL R A PGG PCP C Sbjct: 3 AEDIQEELTCPICL----DYFQDPVSIECGHNFCRGCLHRNWA------PGGGPFPCPEC 52 Query: 102 RQPTAVPPAGAPALCTSR 119 R P+A P A P +R Sbjct: 53 RHPSA-PAALRPNWALAR 69 >gi|226442736 ring finger protein 222 [Homo sapiens] Length = 220 Score = 46.2 bits (108), Expect = 3e-05 Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 41 GSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPF 100 G + +S EC +C+ + ++ + LSC HVFC +CL + + V + CP Sbjct: 4 GESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPI 63 Query: 101 CRQPT 105 CR T Sbjct: 64 CRYVT 68 >gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens] Length = 220 Score = 46.2 bits (108), Expect = 3e-05 Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 41 GSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPF 100 G + +S EC +C+ + ++ + LSC HVFC +CL + + V + CP Sbjct: 4 GESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPI 63 Query: 101 CRQPT 105 CR T Sbjct: 64 CRYVT 68 >gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens] Length = 220 Score = 46.2 bits (108), Expect = 3e-05 Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 41 GSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPF 100 G + +S EC +C+ + ++ + LSC HVFC +CL + + V + CP Sbjct: 4 GESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPI 63 Query: 101 CRQPT 105 CR T Sbjct: 64 CRYVT 68 >gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens] Length = 220 Score = 46.2 bits (108), Expect = 3e-05 Identities = 20/65 (30%), Positives = 32/65 (49%) Query: 41 GSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPF 100 G + +S EC +C+ + ++ + LSC HVFC +CL + + V + CP Sbjct: 4 GESKDSSGSECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQVQRTLVCPI 63 Query: 101 CRQPT 105 CR T Sbjct: 64 CRYVT 68 >gi|9506663 ring finger protein 186 [Homo sapiens] Length = 227 Score = 46.2 bits (108), Expect = 3e-05 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 13/101 (12%) Query: 28 PSSAGSPRS-----PGTPGSERVASPLECSICFSGYDNIFKTPKELSCTHVFCLECLARL 82 P SAG+ + P S LEC +C Y + + PK L+C H FC CL L Sbjct: 12 PISAGATTTTTAVAPAGGHSGSTECDLECLVCREPY-SCPRLPKLLACQHAFCAICLKLL 70 Query: 83 AAAQPVGRPGGEAVPCPFCRQPTAVPPAGAPALCTSRQLQA 123 Q ++ CP CR+ TAVP +C+ R +A Sbjct: 71 LCVQ----DNTWSITCPLCRKVTAVP---GGLICSLRDHEA 104 >gi|153791514 tripartite motif-containing 32 [Homo sapiens] Length = 653 Score = 45.4 bits (106), Expect = 5e-05 Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 13/139 (9%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108 LEC IC + PK L C H C +CL +L A+ G V CPFC + T + Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSING------VRCPFCSKITRIT 71 Query: 109 PAGAPALCTSRQLQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFV----CVDVGL 164 + T ++ E V L + C + LP R G V C + Sbjct: 72 ---SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLCEPCREADH 128 Query: 165 SKPAEPPVPARDPAPRRGR 183 P +P ++ A R R Sbjct: 129 QPPGHCTLPVKEAAEERRR 147 >gi|153792582 tripartite motif-containing 32 [Homo sapiens] Length = 653 Score = 45.4 bits (106), Expect = 5e-05 Identities = 38/139 (27%), Positives = 53/139 (38%), Gaps = 13/139 (9%) Query: 49 LECSICFSGYDNIFKTPKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVP 108 LEC IC + PK L C H C +CL +L A+ G V CPFC + T + Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSING------VRCPFCSKITRIT 71 Query: 109 PAGAPALCTSRQLQARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFV----CVDVGL 164 + T ++ E V L + C + LP R G V C + Sbjct: 72 ---SLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCGLVLCEPCREADH 128 Query: 165 SKPAEPPVPARDPAPRRGR 183 P +P ++ A R R Sbjct: 129 QPPGHCTLPVKEAAEERRR 147 >gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] Length = 511 Score = 44.7 bits (104), Expect = 8e-05 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 22/107 (20%) Query: 29 SSAGSPRSPGTPGSERVASPLE------CSICFSGYDNIFKTPKELSCTHVFCLECLARL 82 ++ G PGT G+E +A E CSIC +F+ P + C H FC C+ R Sbjct: 2 AAVGPRTGPGT-GAEALALAAELQGEATCSICLE----LFREPVSVECGHSFCRACIGRC 56 Query: 83 AAAQPVGRPGGEA------VPCPFCRQPTAVPPAGAPALCTSRQLQA 123 G G +PCP CR+ PA L +RQL A Sbjct: 57 WERPGAGSVGAATRAPPFPLPCPQCRE-----PARPSQLRPNRQLAA 98 >gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens] Length = 221 Score = 44.7 bits (104), Expect = 8e-05 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 22/107 (20%) Query: 29 SSAGSPRSPGTPGSERVASPLE------CSICFSGYDNIFKTPKELSCTHVFCLECLARL 82 ++ G PGT G+E +A E CSIC +F+ P + C H FC C+ R Sbjct: 2 AAVGPRTGPGT-GAEALALAAELQGEATCSICLE----LFREPVSVECGHSFCRACIGRC 56 Query: 83 AAAQPVGRPGGEA------VPCPFCRQPTAVPPAGAPALCTSRQLQA 123 G G +PCP CR+ PA L +RQL A Sbjct: 57 WERPGAGSVGAATRAPPFPLPCPQCRE-----PARPSQLRPNRQLAA 98 >gi|74027251 tripartite motif-containing 33 protein isoform beta [Homo sapiens] Length = 1110 Score = 43.9 bits (102), Expect = 1e-04 Identities = 34/92 (36%), Positives = 40/92 (43%), Gaps = 17/92 (18%) Query: 22 ASMPRSPSSAGSPRSPGTPGSERVASPLE-CSICFSGYDNIFKT-PKELSCTHVFCLECL 79 AS P SAG P PG P AS L+ C++C + + PK L C H FCL CL Sbjct: 102 ASAPAPGPSAGPP--PGPP-----ASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCL 154 Query: 80 ARLAAAQPVGRPGGE--------AVPCPFCRQ 103 V PGG + CP CRQ Sbjct: 155 PEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQ 186 >gi|74027249 tripartite motif-containing 33 protein isoform alpha [Homo sapiens] Length = 1127 Score = 43.9 bits (102), Expect = 1e-04 Identities = 34/92 (36%), Positives = 40/92 (43%), Gaps = 17/92 (18%) Query: 22 ASMPRSPSSAGSPRSPGTPGSERVASPLE-CSICFSGYDNIFKT-PKELSCTHVFCLECL 79 AS P SAG P PG P AS L+ C++C + + PK L C H FCL CL Sbjct: 102 ASAPAPGPSAGPP--PGPP-----ASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCL 154 Query: 80 ARLAAAQPVGRPGGE--------AVPCPFCRQ 103 V PGG + CP CRQ Sbjct: 155 PEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQ 186 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.136 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,358,673 Number of Sequences: 37866 Number of extensions: 874792 Number of successful extensions: 7939 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 341 Number of HSP's that attempted gapping in prelim test: 7202 Number of HSP's gapped (non-prelim): 996 length of query: 249 length of database: 18,247,518 effective HSP length: 100 effective length of query: 149 effective length of database: 14,460,918 effective search space: 2154676782 effective search space used: 2154676782 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.