LOC401934 19107

Name: LOC401934	Sequence: fasta or formatted (249aa)		NCBI GI: 239747208
Description: PREDICTED: hypothetical protein		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [249aa] PREDICTED: hypothetical protein alt mRNA [249aa] PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 27 3 C cysteine 6.4 16 2 D aspartate 2.0 5 1 E glutamate 4.0 10 2 F phenylalanine 2.4 6 1 G glycine 6.4 16 2 H histidine 1.2 3 1 I isoleucine 1.2 3 1 K lysine 2.0 5 1 L leucine 10.0 25 3 M methionine 2.0 5 1 N asparagine 1.2 3 1 P proline 15.3 38 3 Q glutamine 3.2 8 2 R arginine 9.6 24 2 S serine 8.4 21 3 T threonine 5.2 13 2 V valine 6.0 15 1 W tryptophan 2.0 5 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC401934 1.000 PREDICTED: hypothetical protein LOC401934 0.996 PREDICTED: hypothetical protein LOC646862 0.160 PREDICTED: hypothetical protein LOC646862 LOC646862 0.160 PREDICTED: hypothetical protein LOC646862 LOC646862 0.160 PREDICTED: hypothetical protein LOC646862 RNF183 0.099 ring finger protein 183 TRIM59 0.055 tripartite motif-containing 59 TRIM56 0.048 tripartite motif-containing 56 TRIM3 0.048 tripartite motif-containing 3 TRIM3 0.048 tripartite motif-containing 3 RNF152 0.048 ring finger protein 152 NHLRC1 0.048 NHL repeat containing 1 RNF208 0.048 ring finger protein 208 RNF182 0.046 ring finger protein 182 TRIM2 0.044 tripartite motif-containing 2 isoform 2 TRIM2 0.044 tripartite motif-containing 2 isoform 1 TRIM4 0.044 tripartite motif protein TRIM4 isoform alpha TRIM4 0.044 tripartite motif protein TRIM4 isoform beta RNF222 0.042 ring finger protein 222 RNF222 0.042 PREDICTED: ring finger protein 222 RNF222 0.042 PREDICTED: ring finger protein 222 RNF222 0.042 PREDICTED: ring finger protein 222 RNF186 0.042 ring finger protein 186 TRIM32 0.040 tripartite motif-containing 32 TRIM32 0.040 tripartite motif-containing 32 TRIM7 0.040 tripartite motif-containing 7 isoform 1 TRIM7 0.040 tripartite motif-containing 7 isoform 4 TRIM33 0.038 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.038 tripartite motif-containing 33 protein isoform alpha... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.