Guide to the Human Genome
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Name: RNF152 Sequence: fasta or formatted (203aa) NCBI GI: 27734873
Description:

ring finger protein 152

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          7           1
 C cysteine            6.9         14           2
 D aspartate           3.4          7           2
 E glutamate           4.9         10           3
 F phenylalanine       2.5          5           1
 G glycine             5.9         12           2
 H histidine           2.0          4           1
 I isoleucine          4.9         10           1
 K lysine              4.4          9           1
 L leucine            10.8         22           2
 M methionine          2.5          5           1
 N asparagine          1.5          3           1
 P proline             8.4         17           2
 Q glutamine           6.4         13           2
 R arginine            5.4         11           3
 S serine              8.9         18           2
 T threonine           5.4         11           1
 V valine              9.9         20           2
 W tryptophan          1.0          2           1
 Y tyrosine            1.5          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 152 
RNF182                0.091   ring finger protein 182 
TRIM32                0.083   tripartite motif-containing 32 
TRIM32                0.083   tripartite motif-containing 32 
RNF186                0.081   ring finger protein 186 
RNF183                0.068   ring finger protein 183 
SH3RF2                0.063   SH3 domain containing ring finger 2 
LOC401934             0.060   PREDICTED: hypothetical protein 
LOC401934             0.060   PREDICTED: hypothetical protein 
LOC401934             0.060   PREDICTED: hypothetical protein 
TRIM56                0.060   tripartite motif-containing 56 
SH3RF3                0.058   SH3 domain containing ring finger 3 
RNF208                0.053   ring finger protein 208 
TRIM3                 0.050   tripartite motif-containing 3 
TRIM3                 0.050   tripartite motif-containing 3 
SH3RF1                0.050   SH3 domain containing ring finger 1 
TRIM59                0.048   tripartite motif-containing 59 
NHLRC1                0.048   NHL repeat containing 1 
TRIM23                0.045   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.045   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.045   ADP-ribosylation factor domain protein 1 isoform alph...
LOC646862             0.043   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.043   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.043   PREDICTED: hypothetical protein LOC646862 
TRIM27                0.043   ret finger protein 
TRIM2                 0.038   tripartite motif-containing 2 isoform 2 
TRIM2                 0.038   tripartite motif-containing 2 isoform 1 
RNF19B                0.035   ring finger protein 19B isoform a 
RNF19B                0.035   ring finger protein 19B isoform b 
TRIM50                0.035   tripartite motif protein 50A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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