Search of human proteins with 239752486

Search of human proteins with 239752486

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
sapiens]
         (137 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ...   278   8e-76
gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]       183   4e-47
gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ...   183   4e-47
gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ...   183   4e-47
gi|239754856 PREDICTED: p150-like [Homo sapiens]                      111   2e-25
gi|239743530 PREDICTED: p150-like [Homo sapiens]                      111   2e-25
gi|239749395 PREDICTED: p150-like [Homo sapiens]                      109   8e-25
gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo ...   100   5e-22
gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo ...   100   5e-22
gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo ...   100   5e-22
gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo ...   100   5e-22
gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]            97   3e-21
gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]            97   3e-21
gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]            97   3e-21
gi|46592978 ATP-binding cassette sub-family G member 1 isoform 7...    31   0.36 
gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member...    31   0.36 
gi|239754054 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]        31   0.36 
gi|239748581 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]        31   0.36 
gi|239742600 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]        31   0.36 
gi|38570064 hypothetical protein LOC136895 [Homo sapiens]              31   0.36 
gi|5032031 RNA binding motif protein 5 [Homo sapiens]                  28   1.8  
gi|40807500 kelch-like 20 [Homo sapiens]                               28   1.8  
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    28   2.4  
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    28   2.4  
gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens]      27   4.0  
gi|41281447 intraflagellar transport 140 [Homo sapiens]                27   4.0  
gi|110349719 titin isoform N2-A [Homo sapiens]                         26   9.0  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      26   9.0  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      26   9.0  
gi|110349715 titin isoform N2-B [Homo sapiens]                         26   9.0  

>gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
           sapiens]
          Length = 137

 Score =  278 bits (712), Expect = 8e-76
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL
Sbjct: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60

Query: 61  ICRIYKEQIYKKKKNHQKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTTMRYN 120
           ICRIYKEQIYKKKKNHQKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTTMRYN
Sbjct: 61  ICRIYKEQIYKKKKNHQKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTTMRYN 120

Query: 121 LTPLRMAIVKKSGKNRC 137
           LTPLRMAIVKKSGKNRC
Sbjct: 121 LTPLRMAIVKKSGKNRC 137


>gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]
          Length = 295

 Score =  183 bits (464), Expect = 4e-47
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 4/141 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 120 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 179

Query: 61  ICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTT 116
           I RIY E  QIYKKK N+  +K +K   +  +KEDIY A +H+K+ + SL IREM+IKTT
Sbjct: 180 ISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTT 239

Query: 117 MRYNLTPLRMAIVKKSGKNRC 137
           MRY+LTP+RMA++KKSG NRC
Sbjct: 240 MRYHLTPVRMAVIKKSGNNRC 260


>gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo
           sapiens]
          Length = 295

 Score =  183 bits (464), Expect = 4e-47
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 4/141 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 120 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 179

Query: 61  ICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTT 116
           I RIY E  QIYKKK N+  +K +K   +  +KEDIY A +H+K+ + SL IREM+IKTT
Sbjct: 180 ISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTT 239

Query: 117 MRYNLTPLRMAIVKKSGKNRC 137
           MRY+LTP+RMA++KKSG NRC
Sbjct: 240 MRYHLTPVRMAVIKKSGNNRC 260


>gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
           sapiens]
          Length = 295

 Score =  183 bits (464), Expect = 4e-47
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 4/141 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 120 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 179

Query: 61  ICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTT 116
           I RIY E  QIYKKK N+  +K +K   +  +KEDIY A +H+K+ + SL IREM+IKTT
Sbjct: 180 ISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTT 239

Query: 117 MRYNLTPLRMAIVKKSGKNRC 137
           MRY+LTP+RMA++KKSG NRC
Sbjct: 240 MRYHLTPVRMAVIKKSGNNRC 260


>gi|239754856 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  111 bits (278), Expect = 2e-25
 Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 178 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 237

Query: 61  ICRIYKE--QIYKKKKNHQK 78
           I RIY E  QIYKKK    K
Sbjct: 238 ISRIYNELKQIYKKKTTPSK 257


>gi|239743530 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  111 bits (278), Expect = 2e-25
 Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 178 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 237

Query: 61  ICRIYKE--QIYKKKKNHQK 78
           I RIY E  QIYKKK    K
Sbjct: 238 ISRIYNELKQIYKKKTTPSK 257


>gi|239749395 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  109 bits (272), Expect = 8e-25
 Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+++TPKAMAT+ KI KWD  KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 178 MGKDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 237

Query: 61  ICRIYKE--QIYKKKKNHQK 78
           I RIY E  QIYKKK    K
Sbjct: 238 ISRIYNELKQIYKKKTTPSK 257


>gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo
           sapiens]
          Length = 240

 Score =  100 bits (248), Expect = 5e-22
 Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 53  IYPSDKGLICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVI 108
           IY SDKGLI RIY E  QIYKKK N+   K +K   +  +KEDIY A  H+K+ +SSL I
Sbjct: 7   IYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSLAI 66

Query: 109 REMEIKTTMRYNLTPLRMAIVKKSGKNRC 137
            EM+IKTTMR++LT +RMAI+KKSG NRC
Sbjct: 67  GEMQIKTTMRFHLTLVRMAIIKKSGNNRC 95


>gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo
           sapiens]
          Length = 240

 Score =  100 bits (248), Expect = 5e-22
 Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 53  IYPSDKGLICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVI 108
           IY SDKGLI RIY E  QIYKKK N+   K +K   +  +KEDIY A  H+K+ +SSL I
Sbjct: 7   IYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSLAI 66

Query: 109 REMEIKTTMRYNLTPLRMAIVKKSGKNRC 137
            EM+IKTTMR++LT +RMAI+KKSG NRC
Sbjct: 67  GEMQIKTTMRFHLTLVRMAIIKKSGNNRC 95


>gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo
           sapiens]
          Length = 240

 Score =  100 bits (248), Expect = 5e-22
 Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 53  IYPSDKGLICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVI 108
           IY SDKGLI RIY E  QIYKKK N+   K +K   +  +KEDIY A  H+K+ +SSL I
Sbjct: 7   IYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSLAI 66

Query: 109 REMEIKTTMRYNLTPLRMAIVKKSGKNRC 137
            EM+IKTTMR++LT +RMAI+KKSG NRC
Sbjct: 67  GEMQIKTTMRFHLTLVRMAIIKKSGNNRC 95


>gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo
           sapiens]
          Length = 240

 Score =  100 bits (248), Expect = 5e-22
 Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 53  IYPSDKGLICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVI 108
           IY SDKGLI RIY E  QIYKKK N+   K +K   +  +KEDIY A  H+K+ +SSL I
Sbjct: 7   IYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSLAI 66

Query: 109 REMEIKTTMRYNLTPLRMAIVKKSGKNRC 137
            EM+IKTTMR++LT +RMAI+KKSG NRC
Sbjct: 67  GEMQIKTTMRFHLTLVRMAIIKKSGNNRC 95


>gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 46/64 (71%), Positives = 54/64 (84%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+ +TPKA+AT+ KI KWDL KLKS  +AK+ IIRVNRQPTEW+ I AIYPSDKGL
Sbjct: 161 MGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGL 220

Query: 61  ICRI 64
           I RI
Sbjct: 221 ISRI 224


>gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 46/64 (71%), Positives = 54/64 (84%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+ +TPKA+AT+ KI KWDL KLKS  +AK+ IIRVNRQPTEW+ I AIYPSDKGL
Sbjct: 161 MGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGL 220

Query: 61  ICRI 64
           I RI
Sbjct: 221 ISRI 224


>gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 97.4 bits (241), Expect = 3e-21
 Identities = 46/64 (71%), Positives = 54/64 (84%)

Query: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60
           MG+DF+ +TPKA+AT+ KI KWDL KLKS  +AK+ IIRVNRQPTEW+ I AIYPSDKGL
Sbjct: 161 MGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGL 220

Query: 61  ICRI 64
           I RI
Sbjct: 221 ISRI 224


>gi|46592978 ATP-binding cassette sub-family G member 1 isoform 7
          [Homo sapiens]
          Length = 663

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 6  ITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTE 46
          I R P+   T    Y  ++T+ KS+C + D ++  N + TE
Sbjct: 2  IMRLPQPHGTNASSYSAEMTEPKSVCVSVDEVVSSNMEATE 42


>gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
           [Homo sapiens]
          Length = 1545

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 79  VSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTTMRYNLTPLRMAIVKKSGKN 135
           + KGY++ LT ED++  +E +K  T +LV    + +T M+  L   R A+ ++  K+
Sbjct: 213 ILKGYKRPLTLEDVWEVDEEMK--TKTLV---SKFETHMKRELQKARRALQRRQEKS 264


>gi|239754054 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
          Length = 1873

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 56  SDKGLICRIYKEQIYKKKKNHQKVSKGYEQTL--TKEDIY 93
           S K  I  +Y E   ++K  H KV+KG + +L   KED+Y
Sbjct: 640 SSKSHIWHVYNENSNRQKLEHVKVNKGSKASLFINKEDVY 679


>gi|239748581 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
          Length = 1873

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 56  SDKGLICRIYKEQIYKKKKNHQKVSKGYEQTL--TKEDIY 93
           S K  I  +Y E   ++K  H KV+KG + +L   KED+Y
Sbjct: 640 SSKSHIWHVYNENSNRQKLEHVKVNKGSKASLFINKEDVY 679


>gi|239742600 PREDICTED: ankyrin repeat domain 31 [Homo sapiens]
          Length = 1873

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 56  SDKGLICRIYKEQIYKKKKNHQKVSKGYEQTL--TKEDIY 93
           S K  I  +Y E   ++K  H KV+KG + +L   KED+Y
Sbjct: 640 SSKSHIWHVYNENSNRQKLEHVKVNKGSKASLFINKEDVY 679


>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
          Length = 590

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 5   FITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEW 47
           F  + PK  A  T +  WD      ICSAK+  I+ N + + W
Sbjct: 240 FYPKPPKTFAPNTSLNSWD-----PICSAKEANIQRNLERSHW 277


>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
          Length = 815

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 58  KGLICRIYKEQIYKKKK--NHQKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIK 114
           K + C + + Q   K     HQ++S  ++Q +   DIYR +   +Q   +L +RE E+K
Sbjct: 645 KKMACLLCRRQFPNKDALVRHQQLSDLHKQNM---DIYRRSRLSEQELEALELREREMK 700


>gi|40807500 kelch-like 20 [Homo sapiens]
          Length = 609

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 32  SAKDTIIRVNRQPTEWENIVAIYPSDKGLICRIYKEQIY 70
           S  +T+ R N Q   W  I  +    K L C +Y++ IY
Sbjct: 472 SPLNTVERYNPQENRWHTIAPMGTRRKHLGCAVYQDMIY 510


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 96  NEHVKQSTSSLVIREMEIKTTMRYNLTPLR 125
           NEH+ ++  SL++ E +++ + R   TPLR
Sbjct: 598 NEHLVENEVSLLLEESDLRRSPRVKTTPLR 627


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 96  NEHVKQSTSSLVIREMEIKTTMRYNLTPLR 125
           NEH+ ++  SL++ E +++ + R   TPLR
Sbjct: 636 NEHLVENEVSLLLEESDLRRSPRVKTTPLR 665


>gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens]
          Length = 994

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 83  YEQTLTKEDIYRANEHVKQSTSSLVIREM---EIKTTMRYNLTPL 124
           Y + L KE+  +  EH+KQ T  L ++++   E+K   R  L  L
Sbjct: 14  YLEELKKEEFRKFKEHLKQMTLQLELKQIPWTEVKKASREELANL 58


>gi|41281447 intraflagellar transport 140 [Homo sapiens]
          Length = 1462

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 38  IRVNRQPTEWENIVAIYPSDKGLICRIYKEQIYKKKKNHQKVSKGYEQTLTKEDIYRANE 97
           +R   Q  E E  VA+  +  G++     EQ+Y+K K H  ++K Y+     ++  +  E
Sbjct: 836 LREAEQEPELEARVAVLATQLGMLEDA--EQLYRKCKRHDLLNKFYQAAGRWQEALQVAE 893

Query: 98  H 98
           H
Sbjct: 894 H 894


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 65    YKEQIYKKKKNHQK-VSKGYEQTLTKEDIYRANEHV 99
             YK+Q +K K+ H++ V K  ++TL   +I    E V
Sbjct: 31890 YKKQEFKSKEEHERHVQKQIDKTLRMAEILSGTESV 31925


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 65    YKEQIYKKKKNHQK-VSKGYEQTLTKEDIYRANEHV 99
             YK+Q +K K+ H++ V K  ++TL   +I    E V
Sbjct: 25585 YKKQEFKSKEEHERHVQKQIDKTLRMAEILSGTESV 25620


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 65    YKEQIYKKKKNHQK-VSKGYEQTLTKEDIYRANEHV 99
             YK+Q +K K+ H++ V K  ++TL   +I    E V
Sbjct: 25518 YKKQEFKSKEEHERHVQKQIDKTLRMAEILSGTESV 25553


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 65    YKEQIYKKKKNHQK-VSKGYEQTLTKEDIYRANEHV 99
             YK+Q +K K+ H++ V K  ++TL   +I    E V
Sbjct: 25393 YKKQEFKSKEEHERHVQKQIDKTLRMAEILSGTESV 25428


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,586,545
Number of Sequences: 37866
Number of extensions: 166725
Number of successful extensions: 690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 50
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.