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Search of human proteins with 239752473
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo
sapiens]
(140 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens] 303 3e-83
gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo ... 303 3e-83
gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo ... 268 1e-72
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens] 192 8e-50
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ... 192 8e-50
gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo ... 186 4e-48
gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo ... 186 4e-48
gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo ... 186 4e-48
gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo ... 186 4e-48
gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo ... 186 4e-48
gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens] 182 8e-47
gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens] 174 3e-44
gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens] 166 6e-42
gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens] 152 7e-38
gi|169217327 PREDICTED: hypothetical protein [Homo sapiens] 152 7e-38
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro... 66 8e-12
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens] 66 8e-12
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ... 65 1e-11
gi|239747006 PREDICTED: similar to testis specific protein, Y-li... 65 1e-11
gi|239746992 PREDICTED: similar to testis specific protein, Y-li... 65 1e-11
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens] 65 1e-11
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens] 65 2e-11
gi|62988322 TSPY-like 1 [Homo sapiens] 47 5e-06
gi|59933284 RUN domain containing 2B [Homo sapiens] 47 7e-06
gi|11545835 TSPY-like 2 [Homo sapiens] 46 9e-06
gi|49410495 TSPY-like 5 [Homo sapiens] 46 9e-06
gi|46094051 TSPY-like 4 [Homo sapiens] 46 9e-06
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... 44 6e-05
gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo sa... 42 1e-04
gi|238908517 colony stimulating factor 2 receptor alpha chain is... 42 2e-04
>gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 140
Score = 303 bits (776), Expect = 3e-83
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR
Sbjct: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH 120
VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH
Sbjct: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH 120
Query: 121 DLGSLQTLPPSFKDSPTSAF 140
DLGSLQTLPPSFKDSPTSAF
Sbjct: 121 DLGSLQTLPPSFKDSPTSAF 140
>gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo
sapiens]
Length = 140
Score = 303 bits (776), Expect = 3e-83
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR
Sbjct: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH 120
VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH
Sbjct: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWH 120
Query: 121 DLGSLQTLPPSFKDSPTSAF 140
DLGSLQTLPPSFKDSPTSAF
Sbjct: 121 DLGSLQTLPPSFKDSPTSAF 140
>gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo
sapiens]
Length = 228
Score = 268 bits (684), Expect = 1e-72
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 17 MSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQ 76
MSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQ
Sbjct: 105 MSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQ 164
Query: 77 ASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDSP 136
ASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDSP
Sbjct: 165 ASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDSP 224
Query: 137 TSAF 140
TSAF
Sbjct: 225 TSAF 228
>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 357
Score = 192 bits (488), Expect = 8e-50
Identities = 98/143 (68%), Positives = 110/143 (76%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M GRWRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 170 MSAWVGKHAEVLLCYVMDLQVRLGSLGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 228
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQAS CRQ +YLSLFS LAEHDCLGFG I+EMESH V
Sbjct: 229 CVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCV 288
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QAGVK LGSLQ LPP+ +DS
Sbjct: 289 IQAGVKGKSLGSLQPLPPASQDS 311
>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
sapiens]
Length = 357
Score = 192 bits (488), Expect = 8e-50
Identities = 98/143 (68%), Positives = 110/143 (76%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M GRWRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 170 MSAWVGKHAEVLLCYVMDLQVRLGSLGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 228
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQAS CRQ +YLSLFS LAEHDCLGFG I+EMESH V
Sbjct: 229 CVGILGYRVSHSTAVQRFWDHEGQASRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCV 288
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QAGVK LGSLQ LPP+ +DS
Sbjct: 289 IQAGVKGKSLGSLQPLPPASQDS 311
>gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo
sapiens]
Length = 145
Score = 186 bits (473), Expect = 4e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QA VKW L SLQ LPP+ KDS
Sbjct: 120 IQAAVKWQTLRSLQPLPPASKDS 142
>gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo
sapiens]
Length = 145
Score = 186 bits (473), Expect = 4e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QA VKW L SLQ LPP+ KDS
Sbjct: 120 IQAAVKWQTLRSLQPLPPASKDS 142
>gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo
sapiens]
Length = 145
Score = 186 bits (473), Expect = 4e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QA VKW L SLQ LPP+ KDS
Sbjct: 120 IQAAVKWQTLRSLQPLPPASKDS 142
>gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo
sapiens]
Length = 145
Score = 186 bits (473), Expect = 4e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QA VKW L SLQ LPP+ KDS
Sbjct: 120 IQAAVKWQTLRSLQPLPPASKDS 142
>gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo
sapiens]
Length = 145
Score = 186 bits (473), Expect = 4e-48
Identities = 95/143 (66%), Positives = 107/143 (74%), Gaps = 9/143 (6%)
Query: 1 MSAWVRNHNDVLLCYMMS--------GRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEY 52
MSAWV H +VLLCY+M G WRN+AI VTG R I FH NLYFH+E+I++E+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSLGLWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEH 59
Query: 53 CVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYV 112
CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+E+ESH V
Sbjct: 60 CVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAELESHCV 119
Query: 113 TQAGVKWHDLGSLQTLPPSFKDS 135
QA VKW L SLQ LPP+ KDS
Sbjct: 120 IQAAVKWQTLRSLQPLPPASKDS 142
>gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 152
Score = 182 bits (462), Expect = 8e-47
Identities = 94/150 (62%), Positives = 106/150 (70%), Gaps = 16/150 (10%)
Query: 1 MSAWVRNHNDVLLCYMMS---------------GRWRNTAIQVTGRRKKIYFHHNLYFHN 45
MSAWV H +VLLCY+M WRN+AI VTG R I FH NLYFH+
Sbjct: 1 MSAWVGKHAEVLLCYVMDLQVRLGSWVCGRSPVSEWRNSAIPVTGGRM-ISFHPNLYFHS 59
Query: 46 EVIIQEYCVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGIS 105
E+I++E+CVGI GYRVSHSTAV RFWD EGQASSCRQ +YLS FS LAEHDC GFG I+
Sbjct: 60 EIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIA 119
Query: 106 EMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135
E+ESH V QA VKW L SLQ LPP+ KDS
Sbjct: 120 ELESHCVIQAAVKWQTLRSLQPLPPASKDS 149
>gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 223
Score = 174 bits (440), Expect = 3e-44
Identities = 86/118 (72%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
Query: 18 SGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQA 77
+GRWRN+AI VTG R I FH NLYFH+E+I++E+CVGI GYRVSHSTAV RFWD EGQA
Sbjct: 61 AGRWRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQA 119
Query: 78 SSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135
S CRQ +YLSLFS LAEHDCLGFG I+EMESH V QAGVK LGSLQ LPP+ +DS
Sbjct: 120 SRCRQYTSYLSLFSCLAEHDCLGFGRIAEMESHCVIQAGVKGKSLGSLQPLPPASQDS 177
>gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 185
Score = 166 bits (420), Expect = 6e-42
Identities = 82/115 (71%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
Query: 21 WRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQASSC 80
WRN+AI VTG R I FH NLYFH+E+I++E+CVGI GYRVSHSTAV RFWD EGQASSC
Sbjct: 69 WRNSAIPVTGGRM-ISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSC 127
Query: 81 RQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135
RQ +YLS FS LAEHDC GFG I+E+ESH V QA VKW L SLQ LPP+ KDS
Sbjct: 128 RQYTSYLSSFSCLAEHDCPGFGRIAELESHCVIQAAVKWQTLRSLQPLPPASKDS 182
>gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]
Length = 217
Score = 152 bits (385), Expect = 7e-38
Identities = 78/117 (66%), Positives = 85/117 (72%)
Query: 17 MSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQ 76
+ G+ RN+AI TG R K FHHNLYFHNEV IQEYC+GI GYR SHSTAV WD EGQ
Sbjct: 101 IQGKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQ 160
Query: 77 ASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFK 133
ASSCRQ +YLS FS LA+ DC G G I E ESH VTQAGVK DLGS Q P +FK
Sbjct: 161 ASSCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQPPPATFK 217
>gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 152 bits (385), Expect = 7e-38
Identities = 78/117 (66%), Positives = 85/117 (72%)
Query: 17 MSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQ 76
+ G+ RN+AI TG R K FHHNLYFHNEV IQEYC+GI GYR SHSTAV WD EGQ
Sbjct: 101 IQGKGRNSAIPGTGGRIKFSFHHNLYFHNEVTIQEYCIGILGYRESHSTAVQWLWDHEGQ 160
Query: 77 ASSCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFK 133
ASSCRQ +YLS FS LA+ DC G G I E ESH VTQAGVK DLGS Q P +FK
Sbjct: 161 ASSCRQYTSYLSFFSPLADCDCPGSGRIPEKESHSVTQAGVKCQDLGSPQPPPATFK 217
>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
protein 1 [Homo sapiens]
Length = 308
Score = 66.2 bits (160), Expect = 8e-12
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 169 MSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 228
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 229 ASHSTPIEWYLDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
Length = 308
Score = 66.2 bits (160), Expect = 8e-12
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S +V + ++F N YF N+VI +EY V I YR
Sbjct: 169 MSALITDEDEDMLSYMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 228
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 229 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
sapiens]
Length = 308
Score = 65.5 bits (158), Expect = 1e-11
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 169 MSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 228
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 229 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|239747006 PREDICTED: similar to testis specific protein,
Y-linked 3 [Homo sapiens]
Length = 314
Score = 65.5 bits (158), Expect = 1e-11
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 175 MSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 234
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 235 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 281
>gi|239746992 PREDICTED: similar to testis specific protein,
Y-linked 1 [Homo sapiens]
Length = 314
Score = 65.5 bits (158), Expect = 1e-11
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 175 MSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 234
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 235 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 281
>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
Length = 308
Score = 65.5 bits (158), Expect = 1e-11
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 169 MSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 228
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 229 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
Length = 308
Score = 64.7 bits (156), Expect = 2e-11
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
MSA + + ++ +L YM+S V + ++F N YF N+VI +EY V I YR
Sbjct: 169 MSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYR 228
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
SHST + + D E +A R + + L+ F+W ++H+ G I+E+
Sbjct: 229 ASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEI 275
>gi|62988322 TSPY-like 1 [Homo sapiens]
Length = 437
Score = 47.0 bits (110), Expect = 5e-06
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
+SA +R + +L Y+ + + TG + K +F N YF N++I++EY V G
Sbjct: 289 LSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRV 348
Query: 61 VSHSTAVHRFWDR--EGQASSCRQNMAYLSLFSWLAEH 96
VS ST + W R E Q+ R S F+W ++H
Sbjct: 349 VSLSTPI--IWRRGHEPQSFIRRNQDLICSFFTWFSDH 384
>gi|59933284 RUN domain containing 2B [Homo sapiens]
Length = 249
Score = 46.6 bits (109), Expect = 7e-06
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 109 SHYVTQAGVKWHDLGSLQTLPPSFK 133
+H VTQAGV+WHDLGSLQ LPP F+
Sbjct: 225 AHSVTQAGVQWHDLGSLQPLPPGFR 249
>gi|11545835 TSPY-like 2 [Homo sapiens]
Length = 693
Score = 46.2 bits (108), Expect = 9e-06
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 30 GRRKKIYFHHNLYFHNEVIIQEYCVGIPGYRVSHSTAVHRFWDREGQASSCRQNMAYLSL 89
G + K+YF N YF N VI++E+ G VSHST + +E QA A S
Sbjct: 305 GYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEPQARRHGNQDASHSF 364
Query: 90 FSWLAEH 96
FSW + H
Sbjct: 365 FSWFSNH 371
>gi|49410495 TSPY-like 5 [Homo sapiens]
Length = 417
Score = 46.2 bits (108), Expect = 9e-06
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
+++++ + +L Y+ S + G + K YF N YF N+V+I+EY G G
Sbjct: 262 LASFLNSQEKEVLSYLNSLEVEELGLARLGYKIKFYFDRNPYFQNKVLIKEYGCGPSGQV 321
Query: 61 VSHSTAVHRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
VS ST + + Q+ S S F W + H + I E+
Sbjct: 322 VSRSTPIQWLPGHDLQSLSQGNPENNRSFFGWFSNHSSIESDKIVEI 368
>gi|46094051 TSPY-like 4 [Homo sapiens]
Length = 414
Score = 46.2 bits (108), Expect = 9e-06
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 1 MSAWVRNHNDVLLCYMMSGRWRNTAIQVTGRRKKIYFHHNLYFHNEVIIQEYCVGIPGYR 60
+S + ++ +L YM++ G + K F N YF NE +++EY G
Sbjct: 264 LSPMISGQDEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYERRSSGRV 323
Query: 61 VSHSTAV--HRFWDREGQASSCRQNMAYLSLFSWLAEHDCLGFGGISEM 107
VS ST + HR D + R+ S F+W ++H L F I+E+
Sbjct: 324 VSLSTPIRWHRGQDPQAHIHRNREGNTIPSFFNWFSDHSLLEFDRIAEI 372
>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
sapiens]
Length = 165
Score = 43.5 bits (101), Expect = 6e-05
Identities = 20/28 (71%), Positives = 21/28 (75%)
Query: 106 EMESHYVTQAGVKWHDLGSLQTLPPSFK 133
EMES V QAGV+W DLGSLQ PP FK
Sbjct: 26 EMESRCVPQAGVQWRDLGSLQPPPPGFK 53
>gi|157151755 ribonuclease P/MRP 30kDa subunit isoform a [Homo
sapiens]
Length = 322
Score = 42.4 bits (98), Expect = 1e-04
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 95 EHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFKDS 135
+ DCL ++ SH VTQAGV+WH+LGSLQ LP K S
Sbjct: 254 DEDCLPASKKAKW-SHSVTQAGVQWHNLGSLQPLPLGLKPS 293
>gi|238908517 colony stimulating factor 2 receptor alpha chain
isoform f precursor [Homo sapiens]
Length = 434
Score = 41.6 bits (96), Expect = 2e-04
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 79 SCRQNMAYLSLFSWLAEHDCLGFGGISEMESHYVTQAGVKWHDLGSLQTLPPSFK 133
S + A + + +W + + + FG SH VTQAGV+WH+LGSLQ P K
Sbjct: 293 SVKIRAADVRILNWSSWSEAIEFG------SHSVTQAGVQWHNLGSLQPPSPRLK 341
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.135 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,601,833
Number of Sequences: 37866
Number of extensions: 210033
Number of successful extensions: 531
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 435
Number of HSP's gapped (non-prelim): 70
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.