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Search of human proteins with 239752128
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752128 PREDICTED: hypothetical protein [Homo sapiens]
(149 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752128 PREDICTED: hypothetical protein [Homo sapiens] 308 1e-84
gi|239757622 PREDICTED: hypothetical protein [Homo sapiens] 255 8e-69
gi|239746636 PREDICTED: hypothetical protein [Homo sapiens] 255 8e-69
gi|4503811 fucosyltransferase 4 [Homo sapiens] 38 0.003
gi|239755394 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|239744215 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|169161476 PREDICTED: hypothetical protein [Homo sapiens] 37 0.008
gi|50658075 phosphodiesterase 4D interacting protein isoform 3 [... 37 0.008
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.010
gi|209862782 hypothetical protein LOC730130 [Homo sapiens] 35 0.023
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 35 0.031
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 34 0.040
gi|239508698 PREDICTED: similar to mucin [Homo sapiens] 34 0.040
gi|30425462 hypothetical protein LOC284185 [Homo sapiens] 34 0.040
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 34 0.052
gi|146134388 YLP motif containing 1 [Homo sapiens] 34 0.052
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 33 0.068
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 33 0.089
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 33 0.089
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 33 0.089
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 33 0.089
gi|22027648 lipin 1 [Homo sapiens] 33 0.089
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 33 0.089
gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens] 33 0.12
gi|112421108 capicua homolog [Homo sapiens] 33 0.12
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 33 0.12
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 32 0.15
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 32 0.15
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 32 0.15
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 32 0.15
>gi|239752128 PREDICTED: hypothetical protein [Homo sapiens]
Length = 149
Score = 308 bits (789), Expect = 1e-84
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MAQAASSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQ 60
MAQAASSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQ
Sbjct: 1 MAQAASSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQ 60
Query: 61 AAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSER 120
AAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSER
Sbjct: 61 AAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSER 120
Query: 121 KRGRPHSLWATGTRSDSAALPAWMAGPRG 149
KRGRPHSLWATGTRSDSAALPAWMAGPRG
Sbjct: 121 KRGRPHSLWATGTRSDSAALPAWMAGPRG 149
>gi|239757622 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 255 bits (652), Expect = 8e-69
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 26 MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ 85
MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ
Sbjct: 1 MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ 60
Query: 86 RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA 145
RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA
Sbjct: 61 RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA 120
Query: 146 GPRG 149
GPRG
Sbjct: 121 GPRG 124
>gi|239746636 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 255 bits (652), Expect = 8e-69
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 26 MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ 85
MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ
Sbjct: 1 MWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQ 60
Query: 86 RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA 145
RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA
Sbjct: 61 RGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWMA 120
Query: 146 GPRG 149
GPRG
Sbjct: 121 GPRG 124
>gi|4503811 fucosyltransferase 4 [Homo sapiens]
Length = 530
Score = 38.1 bits (87), Expect = 0.003
Identities = 44/137 (32%), Positives = 53/137 (38%), Gaps = 23/137 (16%)
Query: 9 GPRWSRE---APPEARGGWTMWLGRRESRGCRQGR---GLAMKPEDQGLVAVTARGLQAA 62
G W +E AP EA G W+ LG R R+GR G A P L A AR L A
Sbjct: 13 GAGWEKEWAEAPQEAPGAWSGRLG--PGRSGRKGRAVPGWASWPAHLALAARPARHLGGA 70
Query: 63 QS-------------ISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARA--PPQTTGRAL 107
G Q R Q Q S R S+P+ RA A P + G
Sbjct: 71 GQGPRPLHSGTAPFHSRASGERQRRLEPQLQHESRCRSSTPADAWRAEAALPVRAMGAPW 130
Query: 108 VTPSARAAPTSERKRGR 124
+P+A A +RGR
Sbjct: 131 GSPTAAAGGRRGWRRGR 147
>gi|239755394 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 37.0 bits (84), Expect = 0.006
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 10 PRWSREAPPEARG-----GWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQS 64
P W+ AP A+G G + LG S + G G A K Q + R L++ Q
Sbjct: 9 PPWAPAAPGPAQGVQRGGGAGVLLGLTASAVQKPGLGRACKEGRQRKSPL--RTLRSNQE 66
Query: 65 ISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGR 124
+E + RR QPG +Q GRA+A P + + + ERK+GR
Sbjct: 67 EQEEEEDEQNGRRH-QPGRKQ--------GRAQARPARSPLRPAATACKGDDRGERKKGR 117
Query: 125 PHSLWATGTRSDSAALPAWMAG 146
+ GTRS W +G
Sbjct: 118 RGN---PGTRSRRITSSLWASG 136
>gi|239744215 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 37.0 bits (84), Expect = 0.006
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 10 PRWSREAPPEARG-----GWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQS 64
P W+ AP A+G G + LG S + G G A K Q + R L++ Q
Sbjct: 9 PPWAPAAPGPAQGVQRGGGAGVLLGLTASAVQKPGLGRACKEGRQRKSPL--RTLRSNQE 66
Query: 65 ISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGR 124
+E + RR QPG +Q GRA+A P + + + ERK+GR
Sbjct: 67 EQEEEEDEQNGRRH-QPGRKQ--------GRAQARPARSPLRPAATACKGDDRGERKKGR 117
Query: 125 PHSLWATGTRSDSAALPAWMAG 146
+ GTRS W +G
Sbjct: 118 RGN---PGTRSRRITSSLWASG 136
>gi|169161476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 36.6 bits (83), Expect = 0.008
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 66 SDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTP-SARAAPTSERKRGR 124
+D GS CRR+ G R S RA P +G A TP S R P+ ER+R
Sbjct: 4 TDSGSC---CRRRCDFGCCCRASR-----RAHYTPYRSGDATRTPQSPRQTPSRERRRPE 55
Query: 125 PHSLWATGTRSDSAALPA--WM 144
P WA + AA A WM
Sbjct: 56 PAGSWAAAAEEEEAAAAATPWM 77
>gi|50658075 phosphodiesterase 4D interacting protein isoform 3
[Homo sapiens]
Length = 310
Score = 36.6 bits (83), Expect = 0.008
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 66 SDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTP-SARAAPTSERKRGR 124
+D GS CRR+ G R S RA P +G A TP S R P+ ER+R
Sbjct: 4 TDSGSC---CRRRCDFGCCCRASR-----RAHYTPYRSGDATRTPQSPRQTPSRERRRPE 55
Query: 125 PHSLWATGTRSDSAALPA--WM 144
P WA + AA A WM
Sbjct: 56 PAGSWAAAAEEEEAAAAATPWM 77
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.010
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 6 SSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSI 65
SS P+ PP R + R++R R+ R + PE + R ++
Sbjct: 1674 SSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS--RTPPRHRRSPSVS 1731
Query: 66 SDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRP 125
S E + + R R+R+ S R + S GR+ +P + + S R + R+R R
Sbjct: 1732 SPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRS 1791
Query: 126 HSLWATGTR 134
S +T R
Sbjct: 1792 GSSQSTSRR 1800
Score = 32.7 bits (73), Expect = 0.12
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 53 AVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQR---GSSPSSNGRARAPPQTTGRALVT 109
A RG +++ + G S+ R + R+ S QR SP GR+R+ PQ G +
Sbjct: 488 ATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRS-PQRPGWSRSR 546
Query: 110 PSARAAPTSERKRGRPHS 127
+ R + +RGR HS
Sbjct: 547 NTQRRGRSRSARRGRSHS 564
Score = 29.6 bits (65), Expect = 0.98
Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 20/125 (16%)
Query: 11 RWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGS 70
RW R P+ RG R R G + + +G RG ++S + G
Sbjct: 521 RWGRSRSPQRRG--------RSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGR 572
Query: 71 SQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWA 130
S R R P +RG S R+R P + R+ R+ + +RGR S
Sbjct: 573 S-----RSRTPA--RRGRS-----RSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620
Query: 131 TGTRS 135
RS
Sbjct: 621 ARRRS 625
Score = 26.9 bits (58), Expect = 6.4
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 16/126 (12%)
Query: 13 SREAPPEARGGWTMWLGRRESRG---CRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEG 69
SR P R + RR SR R+GR + P + +R + S
Sbjct: 584 SRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR-----RSRTRSPVRRRSRSR 638
Query: 70 SSQWRCRRQRQPGSEQRGSS----PSSNGRARA--PPQTTGRALVTPSARAAPTSER--K 121
S R R R +RG S P+ GR+R+ P + +GR+ AR + R +
Sbjct: 639 SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPR 698
Query: 122 RGRPHS 127
RGR S
Sbjct: 699 RGRSRS 704
>gi|209862782 hypothetical protein LOC730130 [Homo sapiens]
Length = 380
Score = 35.0 bits (79), Expect = 0.023
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 87 GSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPAWM 144
GS S G AR G A P A P SE G P L ++SA LPAWM
Sbjct: 3 GSDVDSEGPARR-----GGAARRPGAPGGPGSEAAAGCPEPLSTAEAPAESATLPAWM 55
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 34.7 bits (78), Expect = 0.031
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 20/116 (17%)
Query: 14 REAPPEARGGWTMWLGRR--ESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSS 71
R A P ++G W GRR SR G + ++ S S SS
Sbjct: 1410 RSASPSSQG----WQGRRGRNSRSVSSGSNRTSEA--------------SSSSSSSSSSS 1451
Query: 72 QWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHS 127
+ R R P R SS SS+GR+R ++ + + S+ ++ +S R R R S
Sbjct: 1452 RSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPS 1507
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 34.3 bits (77), Expect = 0.040
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 90 PSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAA---------- 139
P S+G A APP T+ AL PS A T+ S A+G S SA
Sbjct: 397 PPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGFPF 456
Query: 140 LPAWMAGP 147
P WM P
Sbjct: 457 PPPWMGMP 464
>gi|239508698 PREDICTED: similar to mucin [Homo sapiens]
Length = 265
Score = 34.3 bits (77), Expect = 0.040
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 2 AQAASSVGPRWSREAP--PEAR--GGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTAR 57
A A +S G R + P P+ R GG G S Q + E A T+R
Sbjct: 92 APAPTSSGHRTEKRKPQQPQCRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR 151
Query: 58 GLQAAQSISDEGSSQWRCRRQRQPGSEQRGS--SPSSNGRARAPPQTTGRALVTPSARAA 115
G + +++ Q RR ++RGS SPS++ + + A P++R
Sbjct: 152 GHR-----TEKRKPQQPQRRPAAGTGQRRGSRSSPSADQQGAQDREEEAAAAPVPTSRGH 206
Query: 116 PTSERKRGRPHSLWATGT 133
T +RKR +P A GT
Sbjct: 207 RTEKRKRQQPQCRPAAGT 224
>gi|30425462 hypothetical protein LOC284185 [Homo sapiens]
Length = 264
Score = 34.3 bits (77), Expect = 0.040
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 9 GPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDE 68
G RW+R A G + +S G +Q LAM P GL A G Q+ ++
Sbjct: 123 GGRWTRRAEGPREGTFAEQRPHFQSSGAQQESRLAMGPPPLGL--GDAAGDGRGQTGQEK 180
Query: 69 GSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSL 128
G ++ R R+ ++G +P RA A GR A+A+ E+ R L
Sbjct: 181 GRAEGRQARKSACKCPRKGPNPGPWTRAAA---WWGR---LEGAKASAKGEQVRDPGGHL 234
Query: 129 WATGTRSDSA 138
W G S A
Sbjct: 235 WEQGHVSPCA 244
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 33.9 bits (76), Expect = 0.052
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 56 ARGLQAAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTT--GRALVTPSAR 113
AR +AA + + + R +R G + + S +G +RAP G A T +AR
Sbjct: 197 ARSARAATAARAAAAEREEAREERARGCSEASRTSSDSGPSRAPAARVVGGEAAATAAAR 256
Query: 114 AAPTSERKRGRPHSLWATGTRSDSAA 139
A P + G P + + SAA
Sbjct: 257 ARPRAPLAAGSPVPVRPQDAAARSAA 282
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 33.9 bits (76), Expect = 0.052
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 28 LGRRESRGCRQGRGLAMKPEDQGLVAVTAR------GLQAAQSISDEGSSQWRCRRQ-RQ 80
+GRRE + RG + D+GLV + GLQ +Q D G++ R R R+
Sbjct: 1062 MGRREDSREKMNRGEGSR--DRGLVRPGSSREKVPGGLQGSQ---DRGAAGSRERGPPRR 1116
Query: 81 PGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGR 124
GS++RG + R R PP+ G P R + ER GR
Sbjct: 1117 AGSQERGPLRRAGSRERIPPRRAGSRERGP-PRGPGSRERGLGR 1159
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 33.5 bits (75), Expect = 0.068
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 24 WTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGS 83
W LGR R LA KP +V + A + + +W + ++P +
Sbjct: 584 WIPGLGR--DRDAWLPGELATKPSASVTASVLEKTTTKAPGKMPKSTKKWVTKNAKRPTT 641
Query: 84 EQRGSSPSSNGRARAPPQTTGR--ALVTPSARAAPTSERKR 122
+ + + RA++PP T + A +T A PTSE R
Sbjct: 642 QPPVMPTTKHSRAQSPPDLTSQTTAALTTEASRRPTSEFTR 682
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 33.1 bits (74), Expect = 0.089
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 21 RGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTA--------RGLQAAQSISDEGSSQ 72
RGG+ RR SR R+GR + P+ + + + + R ++ +S S SS
Sbjct: 88 RGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 147
Query: 73 WRCRRQRQPGSEQRGSSPSSNGRARAPPQ 101
+ + P S++RGS +A PQ
Sbjct: 148 Y----SKSPVSKRRGSQEKQTKKAEGEPQ 172
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 33.1 bits (74), Expect = 0.089
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 21 RGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTA--------RGLQAAQSISDEGSSQ 72
RGG+ RR SR R+GR + P+ + + + + R ++ +S S SS
Sbjct: 90 RGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 149
Query: 73 WRCRRQRQPGSEQRGSSPSSNGRARAPPQ 101
+ + P S++RGS +A PQ
Sbjct: 150 Y----SKSPVSKRRGSQEKQTKKAEGEPQ 174
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 33.1 bits (74), Expect = 0.089
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 21 RGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTA--------RGLQAAQSISDEGSSQ 72
RGG+ RR SR R+GR + P+ + + + + R ++ +S S SS
Sbjct: 88 RGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 147
Query: 73 WRCRRQRQPGSEQRGSSPSSNGRARAPPQ 101
+ + P S++RGS +A PQ
Sbjct: 148 Y----SKSPVSKRRGSQEKQTKKAEGEPQ 172
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 33.1 bits (74), Expect = 0.089
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 21 RGGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTA--------RGLQAAQSISDEGSSQ 72
RGG+ RR SR R+GR + P+ + + + + R ++ +S S SS
Sbjct: 90 RGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 149
Query: 73 WRCRRQRQPGSEQRGSSPSSNGRARAPPQ 101
+ + P S++RGS +A PQ
Sbjct: 150 Y----SKSPVSKRRGSQEKQTKKAEGEPQ 174
>gi|22027648 lipin 1 [Homo sapiens]
Length = 890
Score = 33.1 bits (74), Expect = 0.089
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 61 AAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSER 120
A I EG+S+ C+ +R RG PS+ + AP + TPS+ + R
Sbjct: 104 ATSPILSEGASRMECQLKRGSVDRMRGLDPSTPAQVIAPSE-------TPSSSSVVKKRR 156
Query: 121 KRGRPHSL 128
KR R L
Sbjct: 157 KRRRKSQL 164
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 33.1 bits (74), Expect = 0.089
Identities = 43/159 (27%), Positives = 62/159 (38%), Gaps = 24/159 (15%)
Query: 2 AQAASSVGPRWSREAP-----PEARGGWTMWLG-----RRESRGCRQGRGLAMKPEDQGL 51
A AA+ P +E+P P ++G G RR R R+ R A P +G
Sbjct: 349 AAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGR 408
Query: 52 VAV-------TARGLQAAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAP---PQ 101
++R L A+S SD GS + +PGSE+ + R P P
Sbjct: 409 RRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPA 468
Query: 102 TTGRALVTPSARAAP---TSERKRGRPHSLWATGTRSDS 137
+T + R P +S R G PH + +RS S
Sbjct: 469 STSPSPGAHGRRGGPEGKSSSRSPG-PHPRSWSSSRSPS 506
Score = 32.7 bits (73), Expect = 0.12
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 22/103 (21%)
Query: 42 LAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGSEQRG-------------- 87
L+ K D+G + R ++S S G S W QR GS QR
Sbjct: 278 LSPKHRDEGRKTGSQRS-SGSRSPSPSGGSGWG-SPQRNGGSGQRSGAHGGRPGSAHSPP 335
Query: 88 ---SSPSSNGR---ARAPPQTTGRALVTPSARAAPTSERKRGR 124
SSPS R A A P R +PS R+AP+S+ + GR
Sbjct: 336 DKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGR 378
>gi|40556376 cytokine-like nuclear factor n-pac [Homo sapiens]
Length = 553
Score = 32.7 bits (73), Expect = 0.12
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 83 SEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALPA 142
SE + G+ R ++ R +P RA S RKRGRP T +S+ +
Sbjct: 132 SEGKVKKNMGEGKKRVSSGSSERGSKSPLKRAQEQSPRKRGRPPKDEKDLTIPESSTVKG 191
Query: 143 WMAGP 147
MAGP
Sbjct: 192 MMAGP 196
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 32.7 bits (73), Expect = 0.12
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 55 TARGLQAAQSISDEGSSQWRCRRQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARA 114
+A+G + S SS WR Q G E RG P+ A AP G + + S RA
Sbjct: 1258 SAKGPETMASKFPSSSSDWRVPGQ---GLENRGEPPTPPSPAPAPAVAPGGSSESSSGRA 1314
Query: 115 A-PTSERK 121
A T ERK
Sbjct: 1315 AGDTPERK 1322
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 32.7 bits (73), Expect = 0.12
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 77 RQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSL 128
++ PGS Q+GS SS G A A Q + P A +P+ PH+L
Sbjct: 593 KELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPSQPPADQSPHTL 644
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 32.3 bits (72), Expect = 0.15
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 13/120 (10%)
Query: 24 WTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQPGS 83
W L RR R R ++ P + + RG + + S R R + PG
Sbjct: 38 WEAALPRRRPR-----RHPSVNPRSRAAGSPRTRGRRTEERPSGSRLGD-RGRGRALPGG 91
Query: 84 EQRGSSPSSNGRARAPPQT--TGRALVTPSARAAPTSERKRGRPHSLWATGTRSDSAALP 141
G GR RAP + GR T + RAAP + R P A G+ + ALP
Sbjct: 92 RLGG-----RGRGRAPERVGGRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALP 146
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 32.3 bits (72), Expect = 0.15
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 22 GGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQW-----RCR 76
GG+T G+R++R +G G + A A G + S +D GS+ R R
Sbjct: 129 GGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG--RSPSPADPGSTSSATRVPRAR 186
Query: 77 RQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTR 134
R + + R ++P + G AP ++T +A P+ R + R+ G P L T R
Sbjct: 187 RSSRRALQPRHAAPDAPG---APSRSTSQATPPPAPRF--PASRRPGAPRLLSRTRQR 239
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 32.3 bits (72), Expect = 0.15
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 15/128 (11%)
Query: 22 GGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQP 81
GG G R S Q R + E T+RG + + + R + QR+P
Sbjct: 116 GGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEK--------RKRQQPQRRP 167
Query: 82 --GSEQR---GSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWA--TGTR 134
G+ QR GSSPS++ + + A P++R T +RK +P A TG R
Sbjct: 168 AGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQR 227
Query: 135 SDSAALPA 142
S + P+
Sbjct: 228 RGSRSSPS 235
Score = 31.2 bits (69), Expect = 0.34
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 27/135 (20%)
Query: 35 GCRQGRGLAMKPEDQGL-------VAVTARGLQAAQSISDEGSS-------------QWR 74
G R+G G + + QG A A Q AQ +E ++ + R
Sbjct: 48 GQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSSGHRTEKRKR 107
Query: 75 CRRQRQPGS---EQRGS--SPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLW 129
+ Q QP ++RGS SPS++ + + A P++R T +RKR +P
Sbjct: 108 LQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRP 167
Query: 130 A--TGTRSDSAALPA 142
A TG R S + P+
Sbjct: 168 AGGTGQRRGSGSSPS 182
Score = 29.6 bits (65), Expect = 0.98
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 19/152 (12%)
Query: 2 AQAASSVGPRWSREAPPEARGGWTMWLGRRESRGCRQGRGLAMKP--EDQGLV--AVTAR 57
A A +S G R + P + + RR + G Q RG P + QG A
Sbjct: 251 APAPTSRGHRTEKRKPQQPQ--------RRPAGGTGQRRGSGYSPSADQQGAQDREEEAA 302
Query: 58 GLQAAQSISDEGSSQWRCRRQRQP--GSEQR---GSSPSSNGRARAPPQTTGRALVTPSA 112
A S + R + Q QP G+ QR G S S+N + + A P++
Sbjct: 303 AAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVPTS 362
Query: 113 RAAPTSERKRGRPHSLWATGT--RSDSAALPA 142
T +RK +P A GT R S + P+
Sbjct: 363 SGHRTEKRKPQQPQRRPAAGTGQRRGSGSSPS 394
Score = 28.1 bits (61), Expect = 2.9
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 9/113 (7%)
Query: 30 RRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQWRCRRQRQP------GS 83
RR + G Q RG P A AA + R+ +QP G+
Sbjct: 165 RRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQCRPAGGT 224
Query: 84 EQRG---SSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGT 133
QR SSPS++ + + A P++R T +RK +P A GT
Sbjct: 225 GQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGT 277
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 32.3 bits (72), Expect = 0.15
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 22 GGWTMWLGRRESRGCRQGRGLAMKPEDQGLVAVTARGLQAAQSISDEGSSQW-----RCR 76
GG+T G+R++R +G G + A A G + S +D GS+ R R
Sbjct: 129 GGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPG--RSPSPADPGSTSSATRVPRAR 186
Query: 77 RQRQPGSEQRGSSPSSNGRARAPPQTTGRALVTPSARAAPTSERKRGRPHSLWATGTR 134
R + + R ++P + G AP ++T +A P+ R + R+ G P L T R
Sbjct: 187 RSSRRALQPRHAAPDAPG---APSRSTSQATPPPAPRF--PASRRPGAPRLLSRTRQR 239
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.125 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,144,611
Number of Sequences: 37866
Number of extensions: 346559
Number of successful extensions: 1985
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 340
length of query: 149
length of database: 18,247,518
effective HSP length: 93
effective length of query: 56
effective length of database: 14,725,980
effective search space: 824654880
effective search space used: 824654880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.