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Search of human proteins with 239752057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo
sapiens]
(344 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo ... 707 0.0
gi|239746542 PREDICTED: hypothetical protein XP_002343773 [Homo ... 545 e-155
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 43 4e-04
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 41 0.002
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 41 0.002
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 41 0.002
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 41 0.002
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 40 0.002
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.003
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.003
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 40 0.003
gi|239754611 PREDICTED: hypothetical protein [Homo sapiens] 39 0.009
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ... 38 0.015
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ... 38 0.015
gi|239508892 PREDICTED: hypothetical protein [Homo sapiens] 38 0.015
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.020
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 37 0.020
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s... 37 0.026
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 37 0.034
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 37 0.034
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 37 0.034
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 37 0.034
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 37 0.034
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens] 37 0.034
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ... 37 0.034
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ... 37 0.034
gi|110832843 TBP-associated factor 4 [Homo sapiens] 36 0.057
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 36 0.057
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 36 0.057
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 36 0.057
>gi|239752057 PREDICTED: hypothetical protein XP_002348077 [Homo
sapiens]
Length = 344
Score = 707 bits (1825), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA 60
MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA
Sbjct: 1 MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA 60
Query: 61 GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED 120
GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED
Sbjct: 61 GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED 120
Query: 121 VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE 180
VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE
Sbjct: 121 VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE 180
Query: 181 DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA 240
DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA
Sbjct: 181 DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA 240
Query: 241 LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCWVWAAKPTCPPASSAAARPAV 300
LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCWVWAAKPTCPPASSAAARPAV
Sbjct: 241 LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCWVWAAKPTCPPASSAAARPAV 300
Query: 301 GGCTLCCSLDGLGPRGSLPNHETPSPQLRLLQWSRAPTQPQERV 344
GGCTLCCSLDGLGPRGSLPNHETPSPQLRLLQWSRAPTQPQERV
Sbjct: 301 GGCTLCCSLDGLGPRGSLPNHETPSPQLRLLQWSRAPTQPQERV 344
>gi|239746542 PREDICTED: hypothetical protein XP_002343773 [Homo
sapiens]
Length = 302
Score = 545 bits (1403), Expect = e-155
Identities = 276/311 (88%), Positives = 279/311 (89%), Gaps = 18/311 (5%)
Query: 1 MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA 60
MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPS LLEVDVAQA
Sbjct: 1 MLLKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPS-----------LLEVDVAQA 49
Query: 61 GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED 120
GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED
Sbjct: 50 GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAED 109
Query: 121 VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE 180
VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE
Sbjct: 110 VLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRSPLHE 169
Query: 181 DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA 240
DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA
Sbjct: 170 DLSPLAAQVTVWSCWRRLLRAVAAPPDTWPRGLHRSARERPTGVCSWLGCGPIRLFGSQA 229
Query: 241 LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCWVWAA------KPTCPPASSA 294
LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCW W + +C P +
Sbjct: 230 LAHRRPEEARRPGASSPSLSLQPRCVQARGPPRLLHWHCWSWMVLGPHRERDSC-PVTEG 288
Query: 295 AARPAVGGCTL 305
P G TL
Sbjct: 289 CGDPHPAGLTL 299
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.1 bits (100), Expect = 4e-04
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 11 RTAGLARASGAPSGPAAAAAAPAPSLAAPSAR------ALAPSPPPDLLEVDVAQAGRVG 64
R G + SGA G +A +P ++PS R A AP+PP E ++
Sbjct: 313 RNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSS 372
Query: 65 RQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 101
+ RG G GRR RR +R+ A A RR+ RR
Sbjct: 373 QGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRR 409
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 21 APSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRG------RAQHGV 74
AP+ A AAPAP+ A A A AP+P PD + A+ G QRG + G+
Sbjct: 176 APAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 235
Query: 75 HGRRAPLTARREAARACAR 93
GR A TA A A +
Sbjct: 236 SGRPAAGTAAASANGAAIK 254
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 21 APSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRG------RAQHGV 74
AP+ A AAPAP+ A A A AP+P PD + A+ G QRG + G+
Sbjct: 176 APAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 235
Query: 75 HGRRAPLTARREAARACAR 93
GR A TA A A +
Sbjct: 236 SGRPAAGTAAASANGAAIK 254
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 21 APSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRG------RAQHGV 74
AP+ A AAPAP+ A A A AP+P PD + A+ G QRG + G+
Sbjct: 187 APAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 246
Query: 75 HGRRAPLTARREAARACAR 93
GR A TA A A +
Sbjct: 247 SGRPAAGTAAASANGAAIK 265
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/122 (31%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 6 SSRRTRTAGLARASGAPSGPAAAAAAPAPSLAA-----PSARALAPSPPPDLLEVDVAQA 60
S+R R L R G P+ PAA + A A S + P+A APSPP E + +A
Sbjct: 298 SARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKA 357
Query: 61 ----GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHV 116
G RG + PLT R ++ R R R R R+ A RR
Sbjct: 358 QYIPGAQAATRGLPGRAARRKPPPLTRGRSVEQSPPRERPRAAGR-RGRMAEASGRRGSP 416
Query: 117 RA 118
RA
Sbjct: 417 RA 418
Score = 30.0 bits (66), Expect = 3.2
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 4 KRSSRRTRTAGLARASGAPSGPAAAAAA-------------PAPSLAAPSARALAPSPPP 50
K S ++ T+ L RAS PSGP A PAP+LAA +A +
Sbjct: 420 KASRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRW--R 477
Query: 51 DLLEVDVAQAGRVGRQRGRAQHGVHGRRAPLTARREAARACA 92
E+D A RV R R A +P +R CA
Sbjct: 478 STAEIDAADGRRV-RPRAPAARVPGPGPSPSAPQRRLLYGCA 518
Score = 28.5 bits (62), Expect = 9.2
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 6 SSRRTR-TAGLARASGA---PSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAG 61
S RR R TA + A G P PAA P PS +AP R L D E + G
Sbjct: 472 SCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSD-SECSAGRLG 530
Query: 62 RVGRQ 66
+GR+
Sbjct: 531 PLGRR 535
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 40.4 bits (93), Expect = 0.002
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 3 LKRSSRRTRTAGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDL 52
LKR A A+ A + AAAAAAPAP+LAA +A ALA + P L
Sbjct: 489 LKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPAL 538
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 13 AGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQH 72
A A A+ AP+ AAAAAPA + AA A A A +P P A H
Sbjct: 509 AAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSH 568
Query: 73 GVHGRRAPLTARREAARACARAR 95
+ P +A+R C A+
Sbjct: 569 S----QKPSVPLIQASRPCPAAQ 587
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 40.0 bits (92), Expect = 0.003
Identities = 39/105 (37%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 8 RRTRT-AGLARASGAPSG-PAAAAAAP-APSLAAPSARALAPSPPPDLLEVDVAQA---- 60
R TR+ A LAR G P P AA P AP AAP+A A P+P P+ D Q+
Sbjct: 93 RPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQK 152
Query: 61 ----GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 101
GR R G A G ARR RA A R +R
Sbjct: 153 PRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 40.0 bits (92), Expect = 0.003
Identities = 39/105 (37%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 8 RRTRT-AGLARASGAPSG-PAAAAAAP-APSLAAPSARALAPSPPPDLLEVDVAQA---- 60
R TR+ A LAR G P P AA P AP AAP+A A P+P P+ D Q+
Sbjct: 93 RPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQK 152
Query: 61 ----GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 101
GR R G A G ARR RA A R +R
Sbjct: 153 PRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 40.0 bits (92), Expect = 0.003
Identities = 39/105 (37%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 8 RRTRT-AGLARASGAPSG-PAAAAAAP-APSLAAPSARALAPSPPPDLLEVDVAQA---- 60
R TR+ A LAR G P P AA P AP AAP+A A P+P P+ D Q+
Sbjct: 93 RPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQR 152
Query: 61 ----GRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 101
GR R G A G ARR RA A R +R
Sbjct: 153 PRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAALTGRTHQR 197
>gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 38.5 bits (88), Expect = 0.009
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 4 KRSSRRTRTAGLARAS-GAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGR 62
+R+SRR R A +A AS G PAA P P+ A P A P P +
Sbjct: 63 RRTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA--PEAPALSGRAARLHGAQ 120
Query: 63 VGRQRGRAQHGVHGRRAPLTARREAARAC 91
G G+A+HG R P + E C
Sbjct: 121 RGAPAGQARHGAGNRHPPRQGQEEDGGGC 149
>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
sapiens]
Length = 178
Score = 37.7 bits (86), Expect = 0.015
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 5 RSSRRTRTAGLARAS-GAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRV 63
R+SRR R A +A AS G PAA P P+ A P A P P +
Sbjct: 64 RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA--PEAPALSGRAARLHGAQR 121
Query: 64 GRQRGRAQHGVHGRRAPLTARREAARAC 91
G G+A+HG R P + E C
Sbjct: 122 GAPAGQARHGAGNRHPPRQGQEEDGGGC 149
>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
sapiens]
Length = 178
Score = 37.7 bits (86), Expect = 0.015
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 5 RSSRRTRTAGLARAS-GAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRV 63
R+SRR R A +A AS G PAA P P+ A P A P P +
Sbjct: 64 RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA--PEAPALSGRAARLHGAQR 121
Query: 64 GRQRGRAQHGVHGRRAPLTARREAARAC 91
G G+A+HG R P + E C
Sbjct: 122 GAPAGQARHGAGNRHPPRQGQEEDGGGC 149
>gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 37.7 bits (86), Expect = 0.015
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 5 RSSRRTRTAGLARAS-GAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRV 63
R+SRR R A +A AS G PAA P P+ A P A P P +
Sbjct: 64 RTSRRLRAAIVAAASPGLHGRPAACRGHPRPTPARPPTGA--PEAPALSGRAARLHGAQR 121
Query: 64 GRQRGRAQHGVHGRRAPLTARREAARAC 91
G G+A+HG R P + E C
Sbjct: 122 GAPAGQARHGAGNRHPPRQGQEEDGGGC 149
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 37.4 bits (85), Expect = 0.020
Identities = 69/238 (28%), Positives = 85/238 (35%), Gaps = 38/238 (15%)
Query: 2 LLKRSSRRTRTAGLARASGAPSGPAA-AAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA 60
L + RR A + A A GPAA AP P A P+ R P P P A +
Sbjct: 393 LQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASS 452
Query: 61 G-RVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAE 119
G G GR G R ARR AAR R R R L SR
Sbjct: 453 GWHAGSAAGRGWDPGGGSR----ARRRAAR--GRGCLRSARSSPHARPLGSSR------- 499
Query: 120 DVLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRS--- 176
+R L A P + + +ER + W F+ ++ +D RS
Sbjct: 500 --------SVRLLRSAAGRGPSL-DSREVRVLIERGCQWW--FLSRNGVDYTTGPRSEQR 548
Query: 177 -----PL-HEDLSP--LAAQVTVWSCWRRLLRAVAAPPDTWP-RGLHRSARERPTGVC 225
PL EDL P + V WR+ PPD+ R L S R PTG C
Sbjct: 549 GLARAPLPREDLLPGHTCRALDVPHRWRKKGLPDPTPPDSRQLRSLWPSMRNFPTGHC 606
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 37.4 bits (85), Expect = 0.020
Identities = 69/238 (28%), Positives = 85/238 (35%), Gaps = 38/238 (15%)
Query: 2 LLKRSSRRTRTAGLARASGAPSGPAA-AAAAPAPSLAAPSARALAPSPPPDLLEVDVAQA 60
L + RR A + A A GPAA AP P A P+ R P P P A +
Sbjct: 393 LQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASS 452
Query: 61 G-RVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSRRLHVRAE 119
G G GR G R ARR AAR R R R L SR
Sbjct: 453 GWHAGSAAGRGWDPGGGSR----ARRRAAR--GRGCLRSARSSPHARPLGSSR------- 499
Query: 120 DVLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLRAWRS--- 176
+R L A P + + +ER + W F+ ++ +D RS
Sbjct: 500 --------SVRLLRSAAGKGPSL-DSREVRVLIERGCQWW--FLSRNGVDYTTGPRSEQR 548
Query: 177 -----PL-HEDLSP--LAAQVTVWSCWRRLLRAVAAPPDTWP-RGLHRSARERPTGVC 225
PL EDL P + V WR+ PPD+ R L S R PTG C
Sbjct: 549 GLARAPLPREDLLPGHTCRALDVPHRWRKKGLPDPTPPDSRQLRSLWPSMRNFPTGHC 606
>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
sapiens]
Length = 234
Score = 37.0 bits (84), Expect = 0.026
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 58 AQAGRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRR 101
A AG GR+R R Q GRR P RR A AC R R R++R+
Sbjct: 4 AGAGSPGRRRQRCQS--RGRRRPRAPRRRKAPACRRRRARRRRK 45
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 36.6 bits (83), Expect = 0.034
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 24 GPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQHGVHGRRAPLTA 83
GP P P PS + APS L+ GR RGR +G RR PL +
Sbjct: 145 GPLPVKRGPPPRSGGPSPKRSAPS---GLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPS 201
Query: 84 RRE 86
RR+
Sbjct: 202 RRD 204
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 36.6 bits (83), Expect = 0.034
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 24 GPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQHGVHGRRAPLTA 83
GP P P PS + APS L+ GR RGR +G RR PL +
Sbjct: 145 GPLPVKRGPPPRSGGPSPKRSAPS---GLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPS 201
Query: 84 RRE 86
RR+
Sbjct: 202 RRD 204
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 53 LEVDVAQAGRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSR 112
LE + A R GR+ AQ + R A A ARRR R EA +++
Sbjct: 1377 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEA-----LTQ 1431
Query: 113 RLHVRAEDVLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLR 172
RL + E V +L R + A + + TLE+ ++D + +++ VLR
Sbjct: 1432 RLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLR 1491
Query: 173 A 173
A
Sbjct: 1492 A 1492
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 53 LEVDVAQAGRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSR 112
LE + A R GR+ AQ + R A A ARRR R EA +++
Sbjct: 1369 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEA-----LTQ 1423
Query: 113 RLHVRAEDVLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLR 172
RL + E V +L R + A + + TLE+ ++D + +++ VLR
Sbjct: 1424 RLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLR 1483
Query: 173 A 173
A
Sbjct: 1484 A 1484
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 53 LEVDVAQAGRVGRQRGRAQHGVHGRRAPLTARREAARACARARRRQQRRVEARLELAVSR 112
LE + A R GR+ AQ + R A A ARRR R EA +++
Sbjct: 1410 LEEEAAARERAGRELQTAQAQLSEWRRRQEEEAGALEAGEEARRRAAREAEA-----LTQ 1464
Query: 113 RLHVRAEDVLQLRVLHLRHLHQAQVADPKFSEIQNFPGTLERTAERWDGFIVQDQLDVLR 172
RL + E V +L R + A + + TLE+ ++D + +++ VLR
Sbjct: 1465 RLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLR 1524
Query: 173 A 173
A
Sbjct: 1525 A 1525
>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
Length = 513
Score = 36.6 bits (83), Expect = 0.034
Identities = 44/126 (34%), Positives = 51/126 (40%), Gaps = 32/126 (25%)
Query: 14 GLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQR----GR 69
G A A +GP AA A AP L + LA + D AQA G QR GR
Sbjct: 178 GRAEDLQAGAGPRGAAEAQAPQLLGVGSAGLA------AVVGDEAQALAAGSQRPQGLGR 231
Query: 70 AQHG---------------VH---GRRAPLTARREAARACARARRRQQRRVEA----RLE 107
A+HG VH R PL A+ AA A RR+ RR A R
Sbjct: 232 ARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGLRRRHRRPPAAAARRPL 291
Query: 108 LAVSRR 113
LA +RR
Sbjct: 292 LAAARR 297
>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
sapiens]
Length = 513
Score = 36.6 bits (83), Expect = 0.034
Identities = 44/126 (34%), Positives = 51/126 (40%), Gaps = 32/126 (25%)
Query: 14 GLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQR----GR 69
G A A +GP AA A AP L + LA + D AQA G QR GR
Sbjct: 178 GRAEDLQAGAGPRGAAEAQAPQLLGVGSAGLA------AVVGDEAQALAAGSQRPQGLGR 231
Query: 70 AQHG---------------VH---GRRAPLTARREAARACARARRRQQRRVEA----RLE 107
A+HG VH R PL A+ AA A RR+ RR A R
Sbjct: 232 ARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGLRRRHRRPPAAAARRPL 291
Query: 108 LAVSRR 113
LA +RR
Sbjct: 292 LAAARR 297
>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
sapiens]
Length = 513
Score = 36.6 bits (83), Expect = 0.034
Identities = 44/126 (34%), Positives = 51/126 (40%), Gaps = 32/126 (25%)
Query: 14 GLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQR----GR 69
G A A +GP AA A AP L + LA + D AQA G QR GR
Sbjct: 178 GRAEDLQAGAGPRGAAEAQAPQLLGVGSAGLA------AVVGDEAQALAAGSQRPQGLGR 231
Query: 70 AQHG---------------VH---GRRAPLTARREAARACARARRRQQRRVEA----RLE 107
A+HG VH R PL A+ AA A RR+ RR A R
Sbjct: 232 ARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGLRRRHRRPPAAAARRPL 291
Query: 108 LAVSRR 113
LA +RR
Sbjct: 292 LAAARR 297
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 35.8 bits (81), Expect = 0.057
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 14 GLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPP 50
G A SG P GP AAAAAPAP + A S + + + PP
Sbjct: 321 GPAGVSGQP-GPGAAAAAPAPGVKAESPKRVVQAAPP 356
Score = 33.5 bits (75), Expect = 0.28
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 20 GAPSGPAAAAAAPAPSLAAPSARALAPSPPP 50
GA + PA AA +P P+ AP+A A AP PPP
Sbjct: 245 GAAAPPAPAAPSP-PAAPAPAAPAAAPPPPP 274
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 13 AGLARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPP 50
A LAR G P+GP AA A P AA + + +P P
Sbjct: 278 ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAP 315
Score = 29.6 bits (65), Expect = 4.1
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 19 SGAPSGPAAAAAAPAPSLAAPSARALAPSPPP 50
SG+P+G A A A AP+ AP A AP PPP
Sbjct: 64 SGSPAGAAGAGPA-APAEGAPGA---APEPPP 91
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 35.8 bits (81), Expect = 0.057
Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 24 GPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQHGVHGRRAPLTA 83
GPAA A APAP+ A A A AP+P P V + + G T
Sbjct: 423 GPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGT-------TD 475
Query: 84 RREAARACARARR--RQQRRVEAR 105
EA R A RR R+QR E R
Sbjct: 476 PEEATRLLAEKRRLAREQREKEER 499
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 35.8 bits (81), Expect = 0.057
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 16 ARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQHGVH 75
ARA P+ PA A APAPS A +P+ P + + A G +G G +
Sbjct: 38 ARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEE--PGEPAGLGELGEPAGPGE--PE 93
Query: 76 GRRAPLTARREAARACARARRRQQRRVE 103
G P A EA AR+ +++ ++
Sbjct: 94 GPGDPAAAPAEAEEQAVEARQEEEQDLD 121
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 35.8 bits (81), Expect = 0.057
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 16 ARASGAPSGPAAAAAAPAPSLAAPSARALAPSPPPDLLEVDVAQAGRVGRQRGRAQHGVH 75
ARA P+ PA A APAPS A +P+ P + + A G +G G +
Sbjct: 38 ARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEE--PGEPAGLGELGEPAGPGE--PE 93
Query: 76 GRRAPLTARREAARACARARRRQQRRVE 103
G P A EA AR+ +++ ++
Sbjct: 94 GPGDPAAAPAEAEEQAVEARQEEEQDLD 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,455,584
Number of Sequences: 37866
Number of extensions: 933677
Number of successful extensions: 9941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 8418
Number of HSP's gapped (non-prelim): 1603
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.