Search of human proteins with 239751987

Search of human proteins with 239751987

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo
sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo ...   428   e-120
gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens]                    418   e-117
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]      70   1e-12
gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens]                       69   3e-12
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]     68   6e-12
gi|4757842 BCL2-like 2 protein [Homo sapiens]                          64   1e-10
gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]       57   1e-08
gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens]     56   3e-08
gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens]    55   3e-08
gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo sap...    50   1e-06
gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens]          47   1e-05
gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens]            47   1e-05
gi|14210524 BCL2-related ovarian killer [Homo sapiens]                 47   2e-05
gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens]     46   2e-05
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    31   0.67 
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    31   0.67 
gi|31324577 molecule interacting with Rab13 [Homo sapiens]             31   0.88 
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]             30   1.5  
gi|21955174 kinesin family member C2 [Homo sapiens]                    30   1.5  
gi|11545853 concentrative Na+-nucleoside cotransporter [Homo sap...    29   2.6  
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap...    29   2.6  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  29   3.3  
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]                  29   3.3  
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]       29   3.3  
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]     29   3.3  
gi|40807471 transcription termination factor, RNA polymerase II ...    29   3.3  
gi|156938257 leucine rich repeat containing 16B [Homo sapiens]         28   4.4  
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]                28   5.7  
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]                28   5.7  
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]                28   5.7  

>gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo
           sapiens]
          Length = 211

 Score =  428 bits (1100), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEM 60
           MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEM
Sbjct: 1   MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEM 60

Query: 61  VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFE 120
           VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFE
Sbjct: 61  VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFE 120

Query: 121 SGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
           SGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA
Sbjct: 121 SGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180

Query: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
           LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS
Sbjct: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211


>gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens]
          Length = 211

 Score =  418 bits (1075), Expect = e-117
 Identities = 205/211 (97%), Positives = 207/211 (98%)

Query: 1   MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEM 60
           MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFY HQQEQEAEG AAPADPEM
Sbjct: 1   MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM 60

Query: 61  VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFE 120
           VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIA+SLFE
Sbjct: 61  VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE 120

Query: 121 SGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
           SGINWGRVVALLGF YRLALH+YQ GLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA
Sbjct: 121 SGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180

Query: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
           LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS
Sbjct: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211


>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
          Length = 205

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 13/141 (9%)

Query: 53  AAPADPEMVTLPLQ-PSSTMGQVGRQLAII-----------GDDINRRYDSEFQTMLQHL 100
           AA  DP   T PLQ P++     G  L+ +           GDD +RRY  +F  M   L
Sbjct: 60  AASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQL 119

Query: 101 QPTAENAYEYFTKIASSLFESGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVD 160
             T   A   F  +   LF  G+NWGR+VA   F   + +    R ++  +  +  ++ +
Sbjct: 120 HLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTE 179

Query: 161 FMLHHCIARWIAQRGGWVAAL 181
           ++  H +  WI   GGWV AL
Sbjct: 180 YLNRH-LHTWIQDNGGWVGAL 199


>gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens]
          Length = 233

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 71  MGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGINWGRVVA 130
           M  V + L   GD+   RY   F  +   L  T   AY+ F ++ + LF  G+NWGR+VA
Sbjct: 83  MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142

Query: 131 LLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALNL-GNGP-- 187
              F   L +    + +   + ++  ++  ++  H +  WI + GGW   + L GN    
Sbjct: 143 FFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDH-LEPWIQENGGWDTFVELYGNNAAA 201

Query: 188 ------------ILNVLVVLGVVLLGQFVVRR 207
                        L  + V GVVLLG    R+
Sbjct: 202 ESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 233


>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
          Length = 239

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 14/152 (9%)

Query: 53  AAPADPEMVTLPLQ-PSSTMGQVGRQLAII-----------GDDINRRYDSEFQTMLQHL 100
           AA  DP   T PLQ P++     G  L+ +           GDD +RRY  +F  M   L
Sbjct: 60  AASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQL 119

Query: 101 QPTAENAYEYFTKIASSLFESGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVD 160
             T   A   F  +   LF  G+NWGR+VA   F   + +    R ++  +  +  ++ +
Sbjct: 120 HLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTE 179

Query: 161 FMLHHCIARWIAQRGGWVAALNLGNGPILNVL 192
           ++  H +  WI   GGW A + L  GP +  L
Sbjct: 180 YLNRH-LHTWIQDNGGWDAFVEL-YGPSMRPL 209


>gi|4757842 BCL2-like 2 protein [Homo sapiens]
          Length = 193

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 26/198 (13%)

Query: 28  AQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINR 87
           A DT  +   +V Y  +Q+    GA     P    L            + +   GD+   
Sbjct: 7   APDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLH-----------QAMRAAGDEFET 55

Query: 88  RYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGINWGRVVALLGFSYRLALHIYQRGL 147
           R+   F  +   L  T  +A + FT+++  LF+ G NWGR+VA   F   L      + +
Sbjct: 56  RFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEM 115

Query: 148 TGFLGQVTRFVVDFMLHHCIARWIAQRGGWV------------AALNLGNGPILNVLVVL 195
              +GQV  ++V + L   +A WI   GGW              A  L  G   +V  VL
Sbjct: 116 EPLVGQVQEWMVAY-LETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVL 174

Query: 196 -GVVLLGQFV-VRRFFKS 211
            G V LG  V V  FF S
Sbjct: 175 TGAVALGALVTVGAFFAS 192


>gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]
          Length = 218

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 47  QEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
           Q+  G      PE+   P+   ++  ++   L  IGD+++   + E Q M+  +    ++
Sbjct: 32  QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87

Query: 107 AYEYFTKIASSLFESG-INWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHH 165
             E F ++A+ +F  G  NWGRVVAL  F+ +L L      +   +  +  + +DF+   
Sbjct: 88  PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147

Query: 166 CIARWIAQRGGWVAAL 181
            +  WI  +GGWV  L
Sbjct: 148 LLG-WIQDQGGWVRLL 162


>gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens]
          Length = 192

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 6/149 (4%)

Query: 47  QEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
           Q+  G      PE+   P+   ++  ++   L  IGD+++   + E Q M+  +    ++
Sbjct: 32  QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87

Query: 107 AYEYFTKIASSLFESG-INWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHH 165
             E F ++A+ +F  G  NWGRVVAL  F+ +L L      +   +  +  + +DF+   
Sbjct: 88  PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147

Query: 166 CIARWIAQRGGWVAALNLGNGPILNVLVV 194
            +  WI  +GGW   L+    P    + +
Sbjct: 148 LLG-WIQDQGGWDGLLSYFGTPTWQTVTI 175


>gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens]
          Length = 179

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 47  QEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
           Q+  G      PE+   P+   ++  ++   L  IGD+++   + E Q M+  +    ++
Sbjct: 32  QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87

Query: 107 AYEYFTKIASSLFESG-INWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHH 165
             E F ++A+ +F  G  NWGRVVAL  F+ +L L      +   +  +  + +DF+   
Sbjct: 88  PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147

Query: 166 CIARWIAQRGGWVAAL 181
            +  WI  +GGW   +
Sbjct: 148 LLG-WIQDQGGWTVTI 162


>gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo
           sapiens]
          Length = 350

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 15/164 (9%)

Query: 17  PALPSASEEQVAQDTEEVFR-SYVFYHHQQEQEAEGAAAPADPEMVTLPLQPS-STMGQV 74
           P+ P  +EE+     +E++R S         ++A GA         T P+  S +T  + 
Sbjct: 161 PSTPPPAEEE----EDELYRQSLEIISRYLREQATGAKD-------TKPMGRSGATSRKA 209

Query: 75  GRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGI-NWGRVVALLG 133
              L  +GD + R +++ FQ ML+ L    E+  +  +++   +F  G+ NWGR+V L+ 
Sbjct: 210 LETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLIS 269

Query: 134 FSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGW 177
           F   +A H+        +  +   + D +L      W+ ++ GW
Sbjct: 270 FGAFVAKHLKTINQESCIEPLAESITD-VLVRTKRDWLVKQRGW 312


>gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens]
          Length = 163

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)

Query: 66  QPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTA-ENAYEYFTKIASSLFESGI- 123
           QP S   +  R L  +   + +  +   ++ L ++   + + A   F ++    FE GI 
Sbjct: 25  QPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGII 84

Query: 124 NWGRVVALLGFSYRLALHIYQRGLTGFLG---QVTRFVVDFMLHHCIARWIAQRGGW 177
           NWGR+V +  F   L   + ++ +   +    +++ FV +F++++    WI Q GGW
Sbjct: 85  NWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNN-TGEWIRQNGGW 140


>gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens]
          Length = 175

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%)

Query: 66  QPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTA-ENAYEYFTKIASSLFESGI- 123
           QP S   +  R L  +   + +  +   ++ L ++   + + A   F ++    FE GI 
Sbjct: 25  QPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGII 84

Query: 124 NWGRVVALLGFSYRLALHIYQRGLTGFLG---QVTRFVVDFMLHHCIARWIAQRGGW 177
           NWGR+V +  F   L   + ++ +   +    +++ FV +F++++    WI Q GGW
Sbjct: 85  NWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNN-TGEWIRQNGGW 140


>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
          Length = 212

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 73  QVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFESGINWGRVVALL 132
           ++G +L +I   + R    +    LQ  +P   +A   F  +A  +F +GI WG+VV+L 
Sbjct: 72  RLGDELEMIRPSVYRNVARQLHISLQS-EPVVTDA---FLAVAGHIFSAGITWGKVVSLY 127

Query: 133 GFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALN--LGNGP-IL 189
             +  LA+   ++     +  +   + +F +   +A W+ +RGGW   L   +   P + 
Sbjct: 128 AVAAGLAVDCVRQAQPAMVHALVDCLGEF-VRKTLATWLRRRGGWTDVLKCVVSTDPGLR 186

Query: 190 NVLVVLGVVLLGQFVVRRFF 209
           +  +V  +   G+F+   FF
Sbjct: 187 SHWLVAALCSFGRFLKAAFF 206


>gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens]
          Length = 143

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 109 EYFTKIASSLFESG-INWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCI 167
           E F ++A+ +F  G  NWGRVVAL  F+ +L L      +   +  +  + +DF+    +
Sbjct: 41  EVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLL 100

Query: 168 ARWIAQRGGWVAALNLGNGPILNVLVV 194
             WI  +GGW   L+    P    + +
Sbjct: 101 G-WIQDQGGWDGLLSYFGTPTWQTVTI 126


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 7   PGPPRQECG-EPALPSASEEQVAQDTEEVFRSYVFYHHQ-------QEQEAEGAAAPADP 58
           P PP  +   E   P  S+E++ Q+ + V R       Q       Q+Q  E AA P +P
Sbjct: 151 PSPPHTDPELELVPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEP 210

Query: 59  EMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAE 105
           E    P+ P     +    + II D+ NR+       +L+ L P  E
Sbjct: 211 EK---PVSPPPIESKHRSLVQIIYDE-NRKKAEAAHRILEGLGPQVE 253


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 12/107 (11%)

Query: 7   PGPPRQECG-EPALPSASEEQVAQDTEEVFRSYVFYHHQ-------QEQEAEGAAAPADP 58
           P PP  +   E   P  S+E++ Q+ + V R       Q       Q+Q  E AA P +P
Sbjct: 151 PSPPHTDPELELVPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEP 210

Query: 59  EMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAE 105
           E    P+ P     +    + II D+ NR+       +L+ L P  E
Sbjct: 211 EK---PVSPPPIESKHRSLVQIIYDE-NRKKAEAAHRILEGLGPQVE 253


>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
          Length = 863

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 7   PGPPRQECGEPALPSASEEQVAQDTEEV-FRSYVFYHHQQEQEAEGAAAPADPEMVTLPL 65
           PGPP Q+  +  + +   E+VAQ +      S  +   ++E+E +   APA P + T P 
Sbjct: 392 PGPPSQDSRQ--VENGGTEEVAQPSPTASLESKPYNPFEEEEEDKEEEAPAAPSLATSPA 449

Query: 66  --QPSST 70
              P ST
Sbjct: 450 LGHPEST 456


>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
          Length = 2440

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 12  QECGEP--ALPSA-SEEQVAQDTEEVFRSYVFYHHQ-------QEQEAEGAAAPADPEMV 61
           Q CG+   A PS  S+E++ Q  + V R       Q       Q+Q  E AA P +PE  
Sbjct: 163 QPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEK- 221

Query: 62  TLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAE 105
             P+ P   + Q  R +  I  D NR+   E   + + L P  E
Sbjct: 222 --PVSP-PPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVE 262


>gi|21955174 kinesin family member C2 [Homo sapiens]
          Length = 838

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 6   GPGPP---RQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGA 52
           GPGPP    QE  E  L      Q AQDT E  R+ +     Q Q  +GA
Sbjct: 261 GPGPPIRAPQEEAEALLELQGRLQEAQDTTEALRAQLGVQEVQLQGLQGA 310


>gi|11545853 concentrative Na+-nucleoside cotransporter [Homo
           sapiens]
          Length = 691

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 158 VVDFMLHHCIARWIAQRGGWVAALNLGNGPILNVLVVLGVVLLGQ 202
           V+  + +  + +WI ++ GW+  +  G+ PI +V V  G + +GQ
Sbjct: 298 VMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIESV-VASGNIFVGQ 341


>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
           sapiens]
          Length = 890

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 14  CGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPSST--- 70
           CG  AL    EEQ   +  E  ++         +EAEG   P  PE +    QPS     
Sbjct: 640 CGRQALGQGGEEQACWEVGEDKQAEPGGRLDIREEAEGTPQPPQPEEMEPEGQPSPDGCL 699

Query: 71  ------MGQVGRQLA 79
                 +G VG +LA
Sbjct: 700 CPCSLGLGGVGMRLA 714


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 16/84 (19%)

Query: 54  APADPEMVTLPLQ-------------PSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHL 100
           AP  P   T PLQ              S  + Q+GR + +  D ++   +    TML+  
Sbjct: 890 APLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEES 949

Query: 101 QPTAENAYEYFTKIASSLFESGIN 124
            P  +      T IASSL   GIN
Sbjct: 950 MPEDQEPVSASTHIASSL---GIN 970


>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
          Length = 1800

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 16/84 (19%)

Query: 54  APADPEMVTLPLQ-------------PSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHL 100
           AP  P   T PLQ              S  + Q+GR + +  D ++   +    TML+  
Sbjct: 890 APLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEES 949

Query: 101 QPTAENAYEYFTKIASSLFESGIN 124
            P  +      T IASSL   GIN
Sbjct: 950 MPEDQEPVSASTHIASSL---GIN 970


>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
          Length = 1374

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 6    GPGPPRQ--ECGEPALPSA------SEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPAD 57
            GPG PR       P LP+A       EE+ ++D++E       Y  Q+  E     APA 
Sbjct: 1135 GPGTPRAPLRLALPGLPAALEGRPEEEEEDSEDSDESDEELRCYSVQEPSEDSEEEAPAV 1194

Query: 58   PEMV 61
            P +V
Sbjct: 1195 PVVV 1198


>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
          Length = 494

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 5/32 (15%)

Query: 40  FYHHQQEQEAEGAAAPADPEMVTLPLQPSSTM 71
           +Y  QQ+Q+ +G A PA P     P  PS+T+
Sbjct: 391 YYRSQQQQQQQGLAPPAQP-----PAPPSATL 417


>gi|40807471 transcription termination factor, RNA polymerase II
           [Homo sapiens]
          Length = 1162

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 42  HHQQEQEAEGAAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDD 84
           H Q+  E     AP  P     P  P  ++G+ GR+ A   DD
Sbjct: 312 HFQERPETHSVPAPGGPAAQAAPAAPGLSLGE-GREAATSSDD 353


>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
          Length = 1372

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 17   PALPSASEEQVAQDTEE-VFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPSST 70
            P  P   EE  A D    V +  +    QQ+QE      P DP   T PL+P  T
Sbjct: 1290 PQEPGVREEAEAGDAAPGVNKPRLRLSSQQDQEEPEVQGPPDPGRRTAPLKPKRT 1344


>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
          Length = 350

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 25 EQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPS 68
          E++ +DT+   RS V     +E EAE AAA A  E+    L PS
Sbjct: 55 EELMEDTQHKLRSAV-----EEMEAEEAAAKASSEVNLANLPPS 93


>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
          Length = 350

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 25 EQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPS 68
          E++ +DT+   RS V     +E EAE AAA A  E+    L PS
Sbjct: 55 EELMEDTQHKLRSAV-----EEMEAEEAAAKASSEVNLANLPPS 93


>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
          Length = 350

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 25 EQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEMVTLPLQPS 68
          E++ +DT+   RS V     +E EAE AAA A  E+    L PS
Sbjct: 55 EELMEDTQHKLRSAV-----EEMEAEEAAAKASSEVNLANLPPS 93


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,552,138
Number of Sequences: 37866
Number of extensions: 374151
Number of successful extensions: 1466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1438
Number of HSP's gapped (non-prelim): 53
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.