Guide to the Human Genome
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Name: TMEM134 Sequence: fasta or formatted (180aa) NCBI GI: 118403326
Description:

transmembrane protein 134 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {186aa} transmembrane protein 134 isoform c
alt prot {195aa} transmembrane protein 134 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         11           2
 C cysteine            1.7          3           2
 D aspartate           5.0          9           2
 E glutamate           5.6         10           1
 F phenylalanine       8.3         15           2
 G glycine             8.3         15           2
 H histidine           2.2          4           1
 I isoleucine          3.9          7           1
 K lysine              2.2          4           1
 L leucine             9.4         17           5
 M methionine          0.6          1           1
 N asparagine          2.2          4           1
 P proline             5.6         10           1
 Q glutamine           5.0          9           1
 R arginine            7.8         14           2
 S serine             12.2         22           3
 T threonine           3.3          6           1
 V valine              6.1         11           2
 W tryptophan          1.1          2           1
 Y tyrosine            3.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 134 isoform b 
TMEM134               0.971   transmembrane protein 134 isoform a 
TMEM134               0.901   transmembrane protein 134 isoform c 
C20orf30              0.035   hypothetical protein LOC29058 isoform 1 
C20orf30              0.035   hypothetical protein LOC29058 isoform 2 
C20orf30              0.035   hypothetical protein LOC29058 isoform 2 
C20orf30              0.035   hypothetical protein LOC29058 isoform 2 
METRN                 0.020   meteorin, glial cell differentiation regulator [Homo...
LOC642423             0.018   PREDICTED: similar to hCG2004312 
LOC727751             0.018   PREDICTED: similar to cis-Golgi matrix protein GM13...
EPB41                 0.015   erythrocyte membrane protein band 4.1 (elliptocytosi...
BAHCC1                0.012   BAH domain and coiled-coil containing 1 
LSM14A                0.009   LSM14 homolog A isoform a 
LSM14A                0.009   LSM14 homolog A isoform b 
PKDREJ                0.009   receptor for egg jelly-like protein precursor 
BRD1                  0.009   bromodomain containing protein 1 
SLC4A7                0.009   solute carrier family 4, sodium bicarbonate cotrans...
ZBTB8A                0.009   zinc finger and BTB domain containing 8A 
CASS4                 0.009   HEF-like protein 
FBXO18                0.009   F-box only protein, helicase, 18 isoform 1 
FBXO18                0.009   F-box only protein, helicase, 18 isoform 2 
ARL6IP4               0.009   SRp25 nuclear protein isoform 1 
LOC100293005          0.006   PREDICTED: hypothetical protein 
LOC100289780          0.006   PREDICTED: hypothetical protein XP_002347375 
LOC100289202          0.006   PREDICTED: hypothetical protein XP_002343213 
PTCHD2                0.006   patched domain containing 2 
LOC100293384          0.006   PREDICTED: hypothetical protein 
LOC100289983          0.006   PREDICTED: hypothetical protein XP_002347407 
LOC100288706          0.006   PREDICTED: hypothetical protein XP_002343233 
ARL6IP4               0.006   SRp25 nuclear protein isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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