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Search of human proteins with 118344450
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118344450 cell death inducing protein [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118344450 cell death inducing protein [Homo sapiens] 470 e-133
gi|210147505 lipopolysaccharide-induced TNF-alpha factor isoform... 92 4e-19
gi|65787265 lipopolysaccharide-induced TNF-alpha factor isoform ... 92 4e-19
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 75 5e-14
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 73 2e-13
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 72 3e-13
gi|7706501 WW domain binding protein 11 [Homo sapiens] 72 3e-13
gi|160707881 formin 2 [Homo sapiens] 67 1e-11
gi|50511941 EMI domain containing 1 [Homo sapiens] 67 1e-11
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 66 2e-11
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 65 3e-11
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 65 3e-11
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 65 4e-11
gi|11386183 WAS protein family, member 2 [Homo sapiens] 65 5e-11
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 63 2e-10
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 63 2e-10
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 62 3e-10
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 62 3e-10
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 62 3e-10
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 62 3e-10
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 62 5e-10
gi|150417989 cyclin K isoform 1 [Homo sapiens] 61 6e-10
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 61 8e-10
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 61 8e-10
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 61 8e-10
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 61 8e-10
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 61 8e-10
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 61 8e-10
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 61 8e-10
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 60 1e-09
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 470 bits (1210), Expect = e-133
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP
Sbjct: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
Query: 61 MPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSG 120
MPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSG
Sbjct: 61 MPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSG 120
Query: 121 AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI 180
AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI
Sbjct: 121 AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI 180
Query: 181 PCLINDFKDVTHTCPSCKAYIYTYKRLC 208
PCLINDFKDVTHTCPSCKAYIYTYKRLC
Sbjct: 181 PCLINDFKDVTHTCPSCKAYIYTYKRLC 208
>gi|210147505 lipopolysaccharide-induced TNF-alpha factor isoform 1
[Homo sapiens]
Length = 161
Score = 91.7 bits (226), Expect = 4e-19
Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 51 PPPYEPPGHPMPQPGFIPPHMS--ADGTYMPPGFYPPPGPHPPM-------GYYPPGPYT 101
P PY+ P P P + A +Y P P PGP + G PP YT
Sbjct: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
Query: 102 PGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMN 161
P P P + TV TV V F P+Q CP C + I +++SY G +
Sbjct: 64 Q-PAPIPNNNPITV-------QTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALT 115
Query: 162 FVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRL 207
++ C +GC GCC IP ++ +DV H CP+C+A + TYKRL
Sbjct: 116 WLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
>gi|65787265 lipopolysaccharide-induced TNF-alpha factor isoform 1
[Homo sapiens]
Length = 161
Score = 91.7 bits (226), Expect = 4e-19
Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 51 PPPYEPPGHPMPQPGFIPPHMS--ADGTYMPPGFYPPPGPHPPM-------GYYPPGPYT 101
P PY+ P P P + A +Y P P PGP + G PP YT
Sbjct: 4 PGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPSYYT 63
Query: 102 PGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMN 161
P P P + TV TV V F P+Q CP C + I +++SY G +
Sbjct: 64 Q-PAPIPNNNPITV-------QTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALT 115
Query: 162 FVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRL 207
++ C +GC GCC IP ++ +DV H CP+C+A + TYKRL
Sbjct: 116 WLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 161
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 74.7 bits (182), Expect = 5e-14
Identities = 55/145 (37%), Positives = 61/145 (42%), Gaps = 38/145 (26%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPP------------ 52
PPPP+P G T P G P PG P PPPG LPP GPP
Sbjct: 226 PPPPFPAGQTPP--RPPLGPPGPPGPPGP----PPPGQVLPPPLAGPPNRGDRPPPPVLF 279
Query: 53 ---PYE-------PPGHPMPQPGFIP---PHMSADGTYMPPGFYP--PPGP-HPPMGYYP 96
P+ PPG P P PG+ P P G PPG +P PPGP PP+ P
Sbjct: 280 PGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAP 339
Query: 97 PGPYTPGPYPG---PGGHTATVLVP 118
P P+ PGP PG P H P
Sbjct: 340 P-PHLPGPPPGAPPPAPHVNPAFFP 363
Score = 68.6 bits (166), Expect = 4e-12
Identities = 47/130 (36%), Positives = 53/130 (40%), Gaps = 25/130 (19%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQ 63
PPPP PG GP + G PP PG P PPG PP + PPP+ P P
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPPPPPGPFPPR----PPGPLGPPLTLAPPPHLPG----PP 347
Query: 64 PGFIPPHMSADGTYMPPGFYPPP-----------GPHPPMGYYPPGPYTPGPYPGPGGHT 112
PG PP ++ P F+PPP GP P Y P PY G Y PG
Sbjct: 348 PGAPPP-----APHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREM 402
Query: 113 ATVLVPSGAA 122
T P A
Sbjct: 403 DTARTPLSEA 412
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/110 (34%), Positives = 40/110 (36%), Gaps = 22/110 (20%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPG---MPLPPADIGPPPYEPP 57
MS E PGG + A P GR PG P P GPPP P
Sbjct: 180 MSGEGKAGPPGGSSR-------AAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPA 232
Query: 58 GHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPG 107
G P+P PP PPG PPGP PP G P P P G
Sbjct: 233 GQTPPRPPLGPPG--------PPG---PPGPPPP-GQVLPPPLAGPPNRG 270
Score = 27.3 bits (59), Expect = 9.4
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 80 PGFYPPPGPHPPM--GYYPPGP--YTPGPYPGPGG 110
PG P GP PP G PP P PGP PGP G
Sbjct: 218 PGPAGPGGPPPPFPAGQTPPRPPLGPPGP-PGPPG 251
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 73.2 bits (178), Expect = 2e-13
Identities = 53/128 (41%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 6 PPPYPGGPTA------PLLEEKSGAPPTPGRSSPAVMQPPPGMPLPP-ADIGPPPYEPPG 58
PP P GP PL+ +G PP P PP G+PLPP GP P PPG
Sbjct: 220 PPSLPAGPPGVKRPPPPLM---NGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPG 276
Query: 59 HPM---PQPGFIPP----HMSADGTYMP-PGFYPP-PGPHPPM-GYYPP--GPYTPGP-- 104
P P PG PP H A G + P PG +PP PG HPP G +PP G + P P
Sbjct: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
Query: 105 -YPGPGGH 111
P PG H
Sbjct: 337 HPPAPGVH 344
Score = 67.0 bits (162), Expect = 1e-11
Identities = 54/136 (39%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 6 PPPYPGG-------PTAPLLEEKSGAP----PTPGRSSPAVMQPPPGMPLPPADIGPPPY 54
PPP PGG PT P G P P PG PA + PP + P G P
Sbjct: 252 PPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPP 311
Query: 55 EPPGHPMPQPGFIPP----HMSADGTYMP-PGFYPP-PGPHPPM-GYYPPGP-YTPGPYP 106
P HP P PG PP H A G + P PG +PP PG HPP G +PP P P P
Sbjct: 312 APGVHP-PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSA 370
Query: 107 G-----PGGHTATVLV 117
G PG H A V
Sbjct: 371 GVHPQAPGVHPAAPAV 386
Score = 57.4 bits (137), Expect = 9e-09
Identities = 51/136 (37%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 7 PPYPG-GPTAPLLEEKSGA--PPTPGRSSPA--VMQPPPGMPLPPADIGPPPYEPPGHPM 61
PP PG P AP + + PP PG PA V P PG+ P + PP P HP
Sbjct: 310 PPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPP--APGVHPP 367
Query: 62 PQPGFIPP-----------HMSADGTYMP-PGFYP-PPGPHP-PMGYYP--PG--PYTPG 103
P G P H A G + P PG +P PG HP P G +P PG P PG
Sbjct: 368 PSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPG 427
Query: 104 PYP-GPGGHTATVLVP 118
+P PG H T + P
Sbjct: 428 VHPSNPGVHPPTPMPP 443
Score = 55.8 bits (133), Expect = 2e-08
Identities = 47/124 (37%), Positives = 53/124 (42%), Gaps = 27/124 (21%)
Query: 7 PPYPG-GPTAPLLEEKSGAPPTPGRSSPAV-MQPPPGMPLPPADIGPPPYEPPGHPMPQP 64
PP PG P AP + PP PG PA + PPP + P G P P HP P
Sbjct: 338 PPAPGVHPPAPGVH-----PPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQA-P 391
Query: 65 GFIPP----HMSADGTY-MPPGFYP--------PPGPHPPM-GYYPPGPYTPG-----PY 105
G PP H A G + PPG +P PPG HP G +PP P P P
Sbjct: 392 GVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS 451
Query: 106 PGPG 109
GPG
Sbjct: 452 EGPG 455
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/96 (34%), Positives = 42/96 (43%), Gaps = 21/96 (21%)
Query: 7 PPYPG-GPTAPLLEEKSGA--PPTPGR--SSPAVMQPPPGM--------PLPPADIGPPP 53
P PG P AP + ++ PP PG +P V PPG+ P PP G P
Sbjct: 374 PQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP---GVHP 430
Query: 54 YEPPGHP-MPQPGFIPPHMSADGTYMPPGFYPPPGP 88
P HP P P + P + ++G PG PPP P
Sbjct: 431 SNPGVHPPTPMPPMLRPPLPSEG----PGNIPPPPP 462
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 72.4 bits (176), Expect = 3e-13
Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPP----YEPPGHP 60
PPPP+ GP P + GAPP P +P PPP P + PPP Y PP
Sbjct: 291 PPPPHNSGPPPPPARGR-GAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPA 349
Query: 61 MPQ-----PGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATV 115
+P P PP + G PP PPP P P PPGP P P G H
Sbjct: 350 LPSSAPSGPPPPPPSVLGVGPVAPP---PPPPPPP-----PPGPPPPPGLPSDGDHQ--- 398
Query: 116 LVPSGAATTVTVLQGEIFEGAPVQTV 141
VP+ A +L +I EGA ++ V
Sbjct: 399 -VPTTAGNKAALLD-QIREGAQLKKV 422
Score = 33.1 bits (74), Expect = 0.17
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 12/45 (26%)
Query: 3 SEPPPPYPG----GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMP 43
S PPPP P GP AP PP P P PPPG+P
Sbjct: 356 SGPPPPPPSVLGVGPVAP--------PPPPPPPPPPGPPPPPGLP 392
Score = 29.6 bits (65), Expect = 1.9
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 18/59 (30%)
Query: 2 SSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
SS P P P PP+ P PPP P PP GPPP PPG P
Sbjct: 352 SSAPSGPPP-------------PPPSVLGVGPVAPPPPPPPPPPP---GPPP--PPGLP 392
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 72.4 bits (176), Expect = 3e-13
Identities = 50/132 (37%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 5 PPPPYPGGPTAPLLEEK---SGAPPTPGRSSPAVMQPPPGMP---------LPPADIGPP 52
P PP G P AP L +G PP P +P ++ PPGMP LPP GPP
Sbjct: 408 PGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLR-PPGMPGLRGPLPRLLPP---GPP 463
Query: 53 PYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPH---------------PPMGYYPP 97
P PPG P P +PP G PP PPP P PP+G PP
Sbjct: 464 PGRPPGPPPGPPPGLPPGPPPRG---PPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPP 520
Query: 98 GPYTPGPYPGPG 109
G + P P P PG
Sbjct: 521 GLFPPAPLPNPG 532
Score = 56.6 bits (135), Expect = 1e-08
Identities = 40/92 (43%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 24 APPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFI-PPHMSADGTYM---- 78
APP PG P + PPP PL P GPP PPG P P F+ PP M +
Sbjct: 404 APPMPG---PPPLGPPPAPPLRPP--GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLL 458
Query: 79 ----PPGFYPPPGPHPPMGYYPPGPYTPGPYP 106
PPG P P P PP G PPGP GP P
Sbjct: 459 PPGPPPGRPPGPPPGPPPG-LPPGPPPRGPPP 489
Score = 46.6 bits (109), Expect = 2e-05
Identities = 38/102 (37%), Positives = 43/102 (42%), Gaps = 31/102 (30%)
Query: 29 GRSSPAVMQPPPGMPLPPADI------GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGF 82
G S+ + Q P +PP+ I GPPP PP P P PP T +PPG
Sbjct: 382 GTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPP----PAPPLRPP---GPPTGLPPG- 433
Query: 83 YPPPGPHP---PMG----------YYPPGP---YTPGPYPGP 108
PPPG P P G PPGP PGP PGP
Sbjct: 434 -PPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGP 474
Score = 35.0 bits (79), Expect = 0.045
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
+ S P P P P+ L+++ P PG P++++ P + P GH
Sbjct: 136 VESIPLPDMPHAPSNILIQDI----PLPGAQPPSILKKTSAYGPPTRAVSILPL--LGHG 189
Query: 61 MPQPGFIPPHMSADGTYMPPGFYPPPGPHPP 91
+P+ +PP PPG PPPGP PP
Sbjct: 190 VPR---LPPGRK------PPG--PPPGPPPP 209
Score = 34.3 bits (77), Expect = 0.077
Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 14/74 (18%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPT-PGRSSPAVMQPPPGM----------PLPPADIGPPP 53
PP P PG P P G PP P + P + P PGM P PP P P
Sbjct: 471 PPGPPPGLPPGP---PPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPAP 527
Query: 54 YEPPGHPMPQPGFI 67
PG P I
Sbjct: 528 LPNPGVLSAPPNLI 541
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 14/76 (18%)
Query: 38 PPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPH-MSADGTYMPP----GFYPPPGPHPPM 92
P P MP P++I +P PG PP + Y PP P G P
Sbjct: 140 PLPDMPHAPSNILI-------QDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPR 192
Query: 93 GYYPPGPYTPGPYPGP 108
PPG PGP PGP
Sbjct: 193 --LPPGRKPPGPPPGP 206
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 67.0 bits (162), Expect = 1e-11
Identities = 51/131 (38%), Positives = 56/131 (42%), Gaps = 27/131 (20%)
Query: 5 PPPPYPGGPTAPLLE-EKSGAPPTPGRSSPAVMQPPP----GMPLPP----ADIGPPPYE 55
PPPP PG PL +G PP P A+ PPP G+PLPP A I PPP
Sbjct: 922 PPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Query: 56 P-----PGHPMPQPGFIPPHMSADGTYMPP------GFYPPPGPHPPMGYYPPGPY---- 100
P P P+P G IPP G +PP PPP P P G PP P
Sbjct: 982 PGAGIPPPPPLPGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1040
Query: 101 --TPGPYPGPG 109
P P PG G
Sbjct: 1041 IPPPPPLPGAG 1051
Score = 64.3 bits (155), Expect = 7e-11
Identities = 48/125 (38%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 5 PPPPYPGG---PTAPLLEEKSGAPPTPGRSSPAVMQPPP--GMPLPPADIGPPPYE---- 55
PPPP PG P PL + G PP P + PPP G +PP PPP
Sbjct: 1131 PPPPLPGAGIPPPPPL--PRVGIPPPPPLPGAGIPPPPPLPGAGIPP----PPPLPGVGI 1184
Query: 56 PPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATV 115
PP P+P G PP +P PPP P P MG PP P P P PG G +
Sbjct: 1185 PPPPPLPGVGIPPP------PPLPGAGIPPPPPLPGMG-IPPAPAPPLPPPGTGIPPPPL 1237
Query: 116 LVPSG 120
L SG
Sbjct: 1238 LPVSG 1242
Score = 63.2 bits (152), Expect = 2e-10
Identities = 50/133 (37%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Query: 5 PPPPYPGG---PTAPLLEEKSGAPPTPGRSSPAVMQPPP----GMPLPP----ADIGPPP 53
PPPP PG P PL +G PP P + PPP G+P PP A I PPP
Sbjct: 1076 PPPPLPGAGIPPPPPL--PGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1133
Query: 54 YEP-----PGHPMPQPGFIPPHMSADGTYMPP------GFYPPPGPHPPMGYYPPGPY-- 100
P P P+P+ G IPP G +PP PPP P P +G PP P
Sbjct: 1134 PLPGAGIPPPPPLPRVG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPG 1192
Query: 101 ----TPGPYPGPG 109
P P PG G
Sbjct: 1193 VGIPPPPPLPGAG 1205
Score = 62.4 bits (150), Expect = 3e-10
Identities = 48/122 (39%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP-----PGH 59
PPPP PG P PP PG P PPP PLP A I PPP P P
Sbjct: 988 PPPPLPGAGIPP-------PPPLPGAGIP----PPP--PLPGAGIPPPPPLPGAGIPPPP 1034
Query: 60 PMPQPGFIPPHMSADGTYMPP------GFYPPPGPHPPMGYYPPGPY------TPGPYPG 107
P+P G IPP G +PP PPP P P G PP P P P PG
Sbjct: 1035 PLPGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1093
Query: 108 PG 109
G
Sbjct: 1094 AG 1095
Score = 62.4 bits (150), Expect = 3e-10
Identities = 48/122 (39%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP-----PGH 59
PPPP PG P PP PG P PPP PLP A I PPP P P
Sbjct: 1010 PPPPLPGAGIPP-------PPPLPGAGIP----PPP--PLPGAGIPPPPPLPGAGIPPPP 1056
Query: 60 PMPQPGFIPPHMSADGTYMPP------GFYPPPGPHPPMGYYPPGPY------TPGPYPG 107
P+P G IPP G +PP PPP P P G PP P P P PG
Sbjct: 1057 PLPGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPG 1115
Query: 108 PG 109
G
Sbjct: 1116 AG 1117
Score = 62.0 bits (149), Expect = 3e-10
Identities = 45/116 (38%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP-----PGH 59
PPPP PG P PP PG P PPP PLP A I PPP P P
Sbjct: 1032 PPPPLPGAGIPP-------PPPLPGAGIP----PPP--PLPGAGIPPPPPLPGAGIPPPP 1078
Query: 60 PMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPY------TPGPYPGPG 109
P+P G PP +P PPP P P +G PP P P P PG G
Sbjct: 1079 PLPGAGIPPP------PPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAG 1128
Score = 61.6 bits (148), Expect = 5e-10
Identities = 51/127 (40%), Positives = 53/127 (41%), Gaps = 30/127 (23%)
Query: 5 PPPPYPGGPTAPLLEEKSGA-----PPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP--- 56
PPPP PG PL GA PP PG P PPP PLP A I PPP P
Sbjct: 955 PPPPLPGAGI-PLPPPLPGAGIPPPPPLPGAGIP----PPP--PLPGAGIPPPPPLPGAG 1007
Query: 57 --PGHPMPQPGFIPPHMSADGTYMPP------GFYPPPGPHPPMGYYPPGPY------TP 102
P P+P G IPP G +PP PPP P P G PP P P
Sbjct: 1008 IPPPPPLPGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1066
Query: 103 GPYPGPG 109
P PG G
Sbjct: 1067 PPLPGAG 1073
Score = 61.2 bits (147), Expect = 6e-10
Identities = 49/118 (41%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP---- 56
M PPPP PG T P L S A P P M PPP PLP A I PPP P
Sbjct: 875 MVPPPPPPLPG-MTVPTLP--STAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGI 931
Query: 57 -PGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYT----PGPYPGPG 109
P P+P G IPP G +PP PPP P + PP P P P PG G
Sbjct: 932 LPLPPLPGAG-IPPPPPLPGAAIPP---PPPLPGAGIPLPPPLPGAGIPPPPPLPGAG 985
Score = 60.8 bits (146), Expect = 8e-10
Identities = 42/116 (36%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 5 PPPPYPGG---PTAPLLEEKSGAPPTPGRSSPAVMQPPP--GMPLPPADIGPPPYEPPGH 59
PPPP PG P PL +G PP P + PPP G+ +PP P PP
Sbjct: 1065 PPPPLPGAGIPPPPPL--PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPP 1122
Query: 60 PMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPY------TPGPYPGPG 109
P+P G PP +P PPP P P +G PP P P P PG G
Sbjct: 1123 PLPGAGIPPP------PPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG 1172
Score = 58.2 bits (139), Expect = 5e-09
Identities = 42/120 (35%), Positives = 48/120 (40%), Gaps = 19/120 (15%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
M PPPP PG P PP PG + + P PG +PP P PP P
Sbjct: 907 MLPPPPPPLPGAGIPP-------PPPLPG-AGILPLPPLPGAGIPPPPPLPGAAIPPPPP 958
Query: 61 MPQPGF-IPPHMSADGTYMPPGF----YPPPGPHPPMGYYPPGPY------TPGPYPGPG 109
+P G +PP + G PP PPP P P G PP P P P PG G
Sbjct: 959 LPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1018
Score = 49.7 bits (117), Expect = 2e-06
Identities = 34/85 (40%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQP 64
PPPP PG P PP PG P P P PLPP G PP PP P+ P
Sbjct: 1197 PPPPLPGAGIPP-------PPPLPGMGIP----PAPAPPLPPPGTGIPP--PPLLPVSGP 1243
Query: 65 GFIPPHMSAD-GTYMPPGFYPPPGP 88
+P S+ T GF PPP P
Sbjct: 1244 PLLPQVGSSTLPTPQVCGFLPPPLP 1268
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 67.0 bits (162), Expect = 1e-11
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Query: 7 PPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGF 66
PP P GP P ++GA TPG P PPG P PPA +GPP H P
Sbjct: 224 PPGPQGP--PGSPGRAGAVGTPGERGPPGPPGPPGPPGPPAPVGPPHARISQHGDP---L 278
Query: 67 IPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGH 111
+ + + P G PPGP PMG PPGP P PG GH
Sbjct: 279 LSNTFTETNNHWPQGPTGPPGPPGPMG--PPGPPGPTGVPGSPGH 321
Score = 41.6 bits (96), Expect = 5e-04
Identities = 28/81 (34%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Query: 35 VMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGY 94
+ QP P P P D P PP P G + + A G P G G PMG
Sbjct: 162 IEQPVPPTPATPEDPAPLWGPPPAQGSPGDGGLQDQVGAWGLPGPTGPKGDAGSRGPMGM 221
Query: 95 Y-PPGPYTPGPYPGPGGHTAT 114
PPGP P PG G T
Sbjct: 222 RGPPGPQGPPGSPGRAGAVGT 242
Score = 34.7 bits (78), Expect = 0.059
Identities = 33/102 (32%), Positives = 35/102 (34%), Gaps = 24/102 (23%)
Query: 9 YPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPP-PYEPPGHPMPQPGFI 67
+P GPT P P PG P P G+P P IGPP P P G I
Sbjct: 290 WPQGPTGP--------PGPPGPMGPPGPPGPTGVPGSPGHIGPPGPTGPKG--------I 333
Query: 68 PPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPG 109
H G G PGP G PGP PG
Sbjct: 334 SGHPGEKG---ERGLRGEPGPQGSAGQRG----EPGPKGDPG 368
Score = 29.6 bits (65), Expect = 1.9
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQ 63
P PP P GP P +G P +PG P P G+ P + G G P PQ
Sbjct: 298 PGPPGPMGPPGP--PGPTGVPGSPGHIGPPGPTGPKGISGHPGEKGERGLR--GEPGPQ 352
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 65.9 bits (159), Expect = 2e-11
Identities = 44/106 (41%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQ-P 64
P PG P P ++ + GAP S + M PG P PP +GPP PPG P P P
Sbjct: 786 PQGLPGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPPGPPGAMGPP--GPPGAPGPAGP 843
Query: 65 GFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGG 110
+P H PPG PPGP PPGP PGP PGP G
Sbjct: 844 AGLPGHQEVLNLQGPPG---PPGPRG-----PPGPSIPGP-PGPRG 880
Score = 55.5 bits (132), Expect = 3e-08
Identities = 53/152 (34%), Positives = 65/152 (42%), Gaps = 38/152 (25%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVM---------QPPPGMPLP-----P 46
M + P PP P G P G P PG + PA + Q PPG P P P
Sbjct: 816 MLTVPGPPGPPGAMGP-----PGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPGPRGPPGP 870
Query: 47 ADIGPP-PYEPPGHPMPQPGFIP-PHMSADGTYM--PPGFYPPPGPHPPMGYYPPGPYTP 102
+ GPP P PPG +P P P +S T++ PPG PPGP P G P
Sbjct: 871 SIPGPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPG---PPGPPGPKGDQGP----- 922
Query: 103 GPYPGPGGHTATVLVP----SGAATTVTVLQG 130
PGP GH +P SG+++ LQG
Sbjct: 923 ---PGPRGHQGEQGLPGFSTSGSSSFGLNLQG 951
Score = 49.3 bits (116), Expect = 2e-06
Identities = 44/124 (35%), Positives = 50/124 (40%), Gaps = 22/124 (17%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGR---SSPAVMQPPPGMPLPPA---DIGPPPYEPPG 58
P P P GP P E G P PG +S + PPG P PP D GPP P G
Sbjct: 870 PSIPGPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQGPPG--PRG 927
Query: 59 HPMPQ--PGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVL 116
H Q PGF S+ G + PPGP PGP P G G +
Sbjct: 928 HQGEQGLPGFSTSGSSSFGLNLQG----PPGP--------PGPQGPKGDKGDPGVPGALG 975
Query: 117 VPSG 120
+PSG
Sbjct: 976 IPSG 979
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/111 (34%), Positives = 47/111 (42%), Gaps = 21/111 (18%)
Query: 1 MSSEPPPPYPGGPTA----PLLEEKSGAPPTP---GRSSPAVMQPPPGMPLPPADIGPP- 52
+ P PP P GP P + G P P G SS + PPG P PP GPP
Sbjct: 949 LQGPPGPPGPQGPKGDKGDPGVPGALGIPSGPSEGGSSSTMYVSGPPGPPGPP---GPPG 1005
Query: 53 PYEPPGHPMPQPGFIPPHMSADG--TYMPPGFYPPPGPHPPMGYYPPGPYT 101
G + Q +I +M +D +Y+ G PPGP PPGP T
Sbjct: 1006 SISSSGQEIQQ--YISEYMQSDSIRSYL-SGVQGPPGPPG-----PPGPVT 1048
Score = 34.7 bits (78), Expect = 0.059
Identities = 41/149 (27%), Positives = 46/149 (30%), Gaps = 32/149 (21%)
Query: 2 SSEPPPPYPGGPTA----------PLLEEKSG--APPTP----GRSSPAVMQPPPGMPLP 45
S P P P GP P ++ G PP P G P + PGM
Sbjct: 670 SGSPGPQGPPGPVGLQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGLTGEPGMRGL 729
Query: 46 PADIGPP-------PYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYP-P 97
P +G P P P GH P+ G PG PPGP G
Sbjct: 730 PGAVGEPGAKGAMGPAGPDGHQGPR--------GEQGLTGMPGIRGPPGPSGDPGKPGLT 781
Query: 98 GPYTPGPYPGPGGHTATVLVPSGAATTVT 126
GP P PG G P VT
Sbjct: 782 GPQGPQGLPGTPGRPGIKGEPGAPGKIVT 810
Score = 32.7 bits (73), Expect = 0.22
Identities = 29/93 (31%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 23 GAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSA----DGTYM 78
G P TPG P P G +G P E P + G + P A G
Sbjct: 585 GFPGTPGIPGPLGHPGPQGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEKG 644
Query: 79 PPGFYPPPGPHPPMGY-YPPGPYTPGPYPGPGG 110
G PGPH P G GP PGP G
Sbjct: 645 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQG 677
Score = 29.6 bits (65), Expect = 1.9
Identities = 31/101 (30%), Positives = 33/101 (32%), Gaps = 6/101 (5%)
Query: 12 GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHM 71
GP P E G A P G P P +GP G P PQ P +
Sbjct: 627 GPMGPRGEAGPPGSGEKGERGAAGEPGPHGPPGVPGSVGPK--GSSGSPGPQGP--PGPV 682
Query: 72 SADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHT 112
G G G PMG PPGP GP G T
Sbjct: 683 GLQGLRGEVGLPGVKGDKGPMG--PPGPKGDQGEKGPRGLT 721
Score = 29.6 bits (65), Expect = 1.9
Identities = 34/107 (31%), Positives = 38/107 (35%), Gaps = 22/107 (20%)
Query: 6 PPPYPGGPTAP-------LLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPP------ 52
PP PG P P +E+ S T G S + PPG P PP GPP
Sbjct: 1179 PPGPPGPPGIPGNVWSSISVEDLSSYLHTAGLS---FIPGPPGPPGPPGPRGPPGVSGAL 1235
Query: 53 -PYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPG 98
Y + I S D G PPGP P G PPG
Sbjct: 1236 ATYAAENSDSFRSELISYLTSPDVRSFIVG---PPGPPGPQG--PPG 1277
Score = 27.3 bits (59), Expect = 9.4
Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 18/98 (18%)
Query: 23 GAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSAD--GTYMPP 80
G P PG S ++ G +GPP PPG P PG + +S + +Y+
Sbjct: 1152 GPPGLPGTSYEELLSLLRGSEFRGI-VGPPG--PPGPP-GIPGNVWSSISVEDLSSYLHT 1207
Query: 81 G---FYP-PPGPHPPMGYYPPGPYTPGPYPGPGGHTAT 114
F P PPGP PGP P PG G AT
Sbjct: 1208 AGLSFIPGPPGP--------PGPPGPRGPPGVSGALAT 1237
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 65.5 bits (158), Expect = 3e-11
Identities = 45/118 (38%), Positives = 50/118 (42%), Gaps = 31/118 (26%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPP-PGMPLPPADIGPPPYEPPGH---- 59
P P YPGGP P+ P QPP PG P P P PY PG+
Sbjct: 17 PNPGYPGGPQPPM---------------PPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
Query: 60 -PMPQPGFIPPHMSADGTYMPPGFYP----PPGPHP----PMGYYPPGPYTPGPYPGP 108
P PQ G+ P G Y P G YP P GP+P P G YP P+ P PY P
Sbjct: 62 SPYPQGGY-PQGPYPQGGY-PQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQP 117
Score = 63.9 bits (154), Expect = 9e-11
Identities = 43/105 (40%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
PPP PG P P PP P + P P PG P P P PY PG+P P
Sbjct: 15 PPPNPGYPGGP-------QPPMPPYAQP----PYPGAPYPQPPFQPSPYGQPGYPHG-PS 62
Query: 66 FIPPHMSADGTYMPPGFYPPPGPHPPMGY----YPPGPYTPGPYP 106
P G Y P G YP GP+P GY YP G Y GPYP
Sbjct: 63 PYPQGGYPQGPY-PQGGYPQ-GPYPQEGYPQGPYPQGGYPQGPYP 105
Score = 56.6 bits (135), Expect = 1e-08
Identities = 38/89 (42%), Positives = 41/89 (46%), Gaps = 20/89 (22%)
Query: 25 PPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYP 84
PP PG P QPP +PP PPY PG P PQP F P Y PG+
Sbjct: 16 PPNPGY--PGGPQPP----MPP--YAQPPY--PGAPYPQPPFQP------SPYGQPGYPH 59
Query: 85 PPGPHP----PMGYYPPGPYTPGPYPGPG 109
P P+P P G YP G Y GPYP G
Sbjct: 60 GPSPYPQGGYPQGPYPQGGYPQGPYPQEG 88
Score = 35.8 bits (81), Expect = 0.027
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 77 YMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGP 108
Y PP P GP PPM Y PY PYP P
Sbjct: 14 YPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQP 45
Score = 35.4 bits (80), Expect = 0.035
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 6 PPPYPGG--PTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQ 63
P PYP G P P + P P P P G P P P P P G P
Sbjct: 61 PSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVF 120
Query: 64 PGFIPPHMSADGTYM---PPGFY 83
PG P G Y PP +Y
Sbjct: 121 PG-QDPDSPQHGNYQEEGPPSYY 142
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 65.5 bits (158), Expect = 3e-11
Identities = 45/118 (38%), Positives = 50/118 (42%), Gaps = 31/118 (26%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPP-PGMPLPPADIGPPPYEPPGH---- 59
P P YPGGP P+ P QPP PG P P P PY PG+
Sbjct: 17 PNPGYPGGPQPPM---------------PPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61
Query: 60 -PMPQPGFIPPHMSADGTYMPPGFYP----PPGPHP----PMGYYPPGPYTPGPYPGP 108
P PQ G+ P G Y P G YP P GP+P P G YP P+ P PY P
Sbjct: 62 SPYPQGGY-PQGPYPQGGY-PQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQP 117
Score = 63.9 bits (154), Expect = 9e-11
Identities = 43/105 (40%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPG 65
PPP PG P P PP P + P P PG P P P PY PG+P P
Sbjct: 15 PPPNPGYPGGP-------QPPMPPYAQP----PYPGAPYPQPPFQPSPYGQPGYPHG-PS 62
Query: 66 FIPPHMSADGTYMPPGFYPPPGPHPPMGY----YPPGPYTPGPYP 106
P G Y P G YP GP+P GY YP G Y GPYP
Sbjct: 63 PYPQGGYPQGPY-PQGGYPQ-GPYPQEGYPQGPYPQGGYPQGPYP 105
Score = 56.6 bits (135), Expect = 1e-08
Identities = 38/89 (42%), Positives = 41/89 (46%), Gaps = 20/89 (22%)
Query: 25 PPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYP 84
PP PG P QPP +PP PPY PG P PQP F P Y PG+
Sbjct: 16 PPNPGY--PGGPQPP----MPP--YAQPPY--PGAPYPQPPFQP------SPYGQPGYPH 59
Query: 85 PPGPHP----PMGYYPPGPYTPGPYPGPG 109
P P+P P G YP G Y GPYP G
Sbjct: 60 GPSPYPQGGYPQGPYPQGGYPQGPYPQEG 88
Score = 35.8 bits (81), Expect = 0.027
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 77 YMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGP 108
Y PP P GP PPM Y PY PYP P
Sbjct: 14 YPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQP 45
Score = 35.4 bits (80), Expect = 0.035
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 6 PPPYPGG--PTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQ 63
P PYP G P P + P P P P G P P P P P G P
Sbjct: 61 PSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVF 120
Query: 64 PGFIPPHMSADGTYM---PPGFY 83
PG P G Y PP +Y
Sbjct: 121 PG-QDPDSPQHGNYQEEGPPSYY 142
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 65.1 bits (157), Expect = 4e-11
Identities = 50/128 (39%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 3 SEPPPPYPGGPTAPLLEEKSGA-------------PPTPGRSSPAVMQPPPGMPLP-PAD 48
S P P PGG P + + A PP G P +PPPGMP P P
Sbjct: 291 SHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPP--RPPPGMPHPGPPP 348
Query: 49 IGPPPYEPP-GHPMPQPGFIPPH-MSADGTYMPPGFYPPPGPHPPMGY----YPPGPYTP 102
+G PP PP G PM PG +PPH M MPP Y P PP GY PP TP
Sbjct: 349 MGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGPLPPPRPTP 408
Query: 103 GPYPGPGG 110
P P G
Sbjct: 409 RPPVPPRG 416
Score = 58.2 bits (139), Expect = 5e-09
Identities = 42/126 (33%), Positives = 51/126 (40%), Gaps = 21/126 (16%)
Query: 24 APPTPGRSSPAVMQ-----PPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYM 78
APP P +P V PPPGMP PP PP P+P PG +PP +
Sbjct: 214 APPPPSAPNPVVSSLGSGLPPPGMP-------PPGSFPP--PVPPPGALPPGI------- 257
Query: 79 PPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPV 138
PP PPP P G+ PP TPG GH+ P G + Q ++ P
Sbjct: 258 PPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPH 317
Query: 139 QTVCPH 144
PH
Sbjct: 318 GLGHPH 323
Score = 57.4 bits (137), Expect = 9e-09
Identities = 43/107 (40%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP--MP 62
PPPP P L SG PP PG PPPG PP + PP PPG P MP
Sbjct: 215 PPPPSAPNPVVSSL--GSGLPP-PG-------MPPPGSFPPP--VPPPGALPPGIPPAMP 262
Query: 63 QPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPG 109
P +PP + G PP P HP G+ P P+ PG P PG
Sbjct: 263 PPP-MPPGAAGHG---PPSAGTPGAGHPGHGHSHPHPFPPGGMPHPG 305
Score = 57.4 bits (137), Expect = 9e-09
Identities = 49/143 (34%), Positives = 53/143 (37%), Gaps = 30/143 (20%)
Query: 5 PPPPYPGGPTA---PLLEEKSGAPPTPGRSSPAVMQPPPGMPLP-----------PADIG 50
PPPP P G P P G S P PP GMP P P +G
Sbjct: 262 PPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPF-PPGGMPHPGMSQMQLAHHGPHGLG 320
Query: 51 ------------PPPYEPPG--HPMPQPGFIPPHMSADGTYMP-PGFYPPPGPHPPMGYY 95
PPP PPG HP P P +PP G+ M PG PP G P
Sbjct: 321 HPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
Query: 96 PPGPYTPGPYPGPGGHTATVLVP 118
PP YT P P P G+ L P
Sbjct: 381 PPHGYTGPPRPPPYGYQRGPLPP 403
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 64.7 bits (156), Expect = 5e-11
Identities = 52/135 (38%), Positives = 58/135 (42%), Gaps = 36/135 (26%)
Query: 1 MSSEPPPPYP--GGPTAPLLEEKSGAPPTPGRSSPAVMQPPP--GMPLPPADIG------ 50
+S PPP P G P P K G P P P PPP G+P PP +G
Sbjct: 295 VSPSHPPPAPPLGSPPGP----KPGFAPPPAPPPP----PPPMIGIPPPPPPVGFGSPGT 346
Query: 51 PPPYEPPGHPMPQPGFI-----PPHMSADGTYMPP-------GFYPPPGPHPPMGYYPPG 98
PPP PP P P P F PP +AD +PP G PPP P PP PPG
Sbjct: 347 PPPPSPPSFP-PHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP----PPG 401
Query: 99 PYTPGPYPGPGGHTA 113
P P P+ G G A
Sbjct: 402 P-PPPPFTGADGQPA 415
Score = 61.2 bits (147), Expect = 6e-10
Identities = 53/145 (36%), Positives = 61/145 (42%), Gaps = 34/145 (23%)
Query: 2 SSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPP----GMPLPPADIG------P 51
SS P +P P AP L G P PG + P PPP G+P PP +G P
Sbjct: 292 SSVVSPSHP--PPAPPLGSPPG--PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTP 347
Query: 52 PPYEPPGHPMPQPGFI-----PPHMSADGTYMPP-------GFYPPPGPHPPMGYYPPGP 99
PP PP P P P F PP +AD +PP G PPP P PP PPG
Sbjct: 348 PPPSPPSFP-PHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP----PPG- 401
Query: 100 YTPGPYPGPGGHTATVLVPSGAATT 124
P P P G + P + TT
Sbjct: 402 --PPPPPFTGADGQPAIPPPLSDTT 424
Score = 47.8 bits (112), Expect = 7e-06
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 31/118 (26%)
Query: 5 PPPP----YP---------GGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGP 51
PPPP YP GP + S PP P SP P PG PPA P
Sbjct: 268 PPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSPP--GPKPGFAPPPA---P 322
Query: 52 PPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPM-GYYPPGPYTPGPYPGP 108
PP PP +P P PP P GF P P PP +PP P P P P
Sbjct: 323 PPPPPPMIGIPPP---PP---------PVGFGSPGTPPPPSPPSFPPHPDFAAPPPPP 368
Score = 41.2 bits (95), Expect = 6e-04
Identities = 30/74 (40%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 5 PPPP---YPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPP---ADIGPPPYEPPG 58
PPPP YP P PL + GAPP P PPPG P PP AD G P PP
Sbjct: 368 PPPPAADYPTLPPPPLSQPTGGAPPPPPPP------PPPGPPPPPFTGAD-GQPAIPPPL 420
Query: 59 HPMPQPGFIPPHMS 72
+P P +S
Sbjct: 421 SDTTKPKSSLPAVS 434
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 62.8 bits (151), Expect = 2e-10
Identities = 46/140 (32%), Positives = 57/140 (40%), Gaps = 21/140 (15%)
Query: 5 PPPPYPGGPTAP--LLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PP P P T P + PP G P PP G+P P G PP PP P
Sbjct: 652 PPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPP-PPPPPPFL 710
Query: 63 QPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAA 122
+PGF P H +PPGF PP PP P TP P P HT + +P+
Sbjct: 711 RPGFNPMH-------LPPGFLPPG---------PPPPITP-PVSIPPPHTPPISIPNSTI 753
Query: 123 TTVTV-LQGEIFEGAPVQTV 141
+ ++ G P+ TV
Sbjct: 754 AGINEDTTKDLSIGNPIPTV 773
Score = 51.6 bits (122), Expect = 5e-07
Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 26/131 (19%)
Query: 2 SSEPPPPYPGGPTAPLLEEKS-----GAPPTP--GRSSPA--VMQPPPGMPLPPADIGPP 52
S+ PP PT P+ + S G P P G +P+ ++ PG+ + P
Sbjct: 792 SAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGL----IPLQRP 847
Query: 53 PYEPPGH----PMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYT------ 101
P PP H P+ P +PPHM G PG + P PH G +PP GP+
Sbjct: 848 PGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP 907
Query: 102 --PGPYPGPGG 110
GP PGPGG
Sbjct: 908 GLGGPGPGPGG 918
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 22 SGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSAD------- 74
+ PP P + PA P P PP P+ PG M QP + H + D
Sbjct: 277 AAVPPAPTATVPAAAAPAAASPPPP----QAPFGFPGDGMQQPAY-TQHQNMDQFQPRMM 331
Query: 75 GTYMPPGFY----PPPGPHPPMGYYPPGPYTPGPYP 106
G P + PP G P G P P+ P P
Sbjct: 332 GIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 367
Score = 35.8 bits (81), Expect = 0.027
Identities = 30/104 (28%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPP----------TPGRSSPAVMQPPPGMPLPPADIG 50
M PPP PGG P G P PG P P PG P
Sbjct: 870 MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG---PGPGGPEDRDGRQ 926
Query: 51 PPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGY 94
PP +P P PQ P PP PPP P +
Sbjct: 927 QPPQQPQQQPQPQAPQQPQQQQQQ--QPPPSQQPPPTQQQPQQF 968
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 62.8 bits (151), Expect = 2e-10
Identities = 46/140 (32%), Positives = 57/140 (40%), Gaps = 21/140 (15%)
Query: 5 PPPPYPGGPTAP--LLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PP P P T P + PP G P PP G+P P G PP PP P
Sbjct: 667 PPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPP-PPPPPPFL 725
Query: 63 QPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAA 122
+PGF P H +PPGF PP PP P TP P P HT + +P+
Sbjct: 726 RPGFNPMH-------LPPGFLPPG---------PPPPITP-PVSIPPPHTPPISIPNSTI 768
Query: 123 TTVTV-LQGEIFEGAPVQTV 141
+ ++ G P+ TV
Sbjct: 769 AGINEDTTKDLSIGNPIPTV 788
Score = 51.6 bits (122), Expect = 5e-07
Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 26/131 (19%)
Query: 2 SSEPPPPYPGGPTAPLLEEKS-----GAPPTP--GRSSPA--VMQPPPGMPLPPADIGPP 52
S+ PP PT P+ + S G P P G +P+ ++ PG+ + P
Sbjct: 807 SAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGL----IPLQRP 862
Query: 53 PYEPPGH----PMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYT------ 101
P PP H P+ P +PPHM G PG + P PH G +PP GP+
Sbjct: 863 PGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP 922
Query: 102 --PGPYPGPGG 110
GP PGPGG
Sbjct: 923 GLGGPGPGPGG 933
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 22 SGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSAD------- 74
+ PP P + PA P P PP P+ PG M QP + H + D
Sbjct: 292 AAVPPAPTATVPAAAAPAAASPPPP----QAPFGFPGDGMQQPAY-TQHQNMDQFQPRMM 346
Query: 75 GTYMPPGFY----PPPGPHPPMGYYPPGPYTPGPYP 106
G P + PP G P G P P+ P P
Sbjct: 347 GIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 382
Score = 35.8 bits (81), Expect = 0.027
Identities = 30/104 (28%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPP----------TPGRSSPAVMQPPPGMPLPPADIG 50
M PPP PGG P G P PG P P PG P
Sbjct: 885 MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG---PGPGGPEDRDGRQ 941
Query: 51 PPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGY 94
PP +P P PQ P PP PPP P +
Sbjct: 942 QPPQQPQQQPQPQAPQQPQQQQQQ--QPPPSQQPPPTQQQPQQF 983
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 62.0 bits (149), Expect = 3e-10
Identities = 50/159 (31%), Positives = 62/159 (38%), Gaps = 39/159 (24%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGA---PPTPGRSSPAVMQPPPG-------MPLPPADIG 50
M+S PPPP P P P ++ A PP P + +P V+ P P P PP
Sbjct: 344 MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARA 403
Query: 51 PPPYEP-PGHPMPQ---PGFIPPHMSADGTYMPPGFYPPPG------------PHPPMGY 94
P E P HP+PQ G PP PP PPPG HPP G
Sbjct: 404 APVCETVPVHPLPQGEVQGLPPPP--------PPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 95 YP-----PGPYTPGPYPGPGGHTATVLVPSGAATTVTVL 128
+P PGP+ P P P P +T+ V+
Sbjct: 456 HPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVI 494
Score = 40.8 bits (94), Expect = 8e-04
Identities = 54/189 (28%), Positives = 61/189 (32%), Gaps = 63/189 (33%)
Query: 4 EPPPPYP---GGPTAPL---------LEEKSGAPPTPGRS----SPAVMQPPPGMP---- 43
EPPPP P G P+ L E P GR+ SP PPP +P
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALS 336
Query: 44 ----------LPPADIGPPPYEPPGHPMPQPGFIPPH---MSADGTY--MPPGFYPP-PG 87
PP + PPP PP + P PP A G PP PP
Sbjct: 337 TSSLRASMTSTPPPPVPPPP-PPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQ 395
Query: 88 PHPPM---------------------GYYPPGPYTPGPYPG-----PGGHTATVLVPSGA 121
P PP+ G PP P P P PG P TA PSG
Sbjct: 396 PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 122 ATTVTVLQG 130
T + G
Sbjct: 456 HPTPSTAPG 464
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 62.0 bits (149), Expect = 3e-10
Identities = 50/159 (31%), Positives = 62/159 (38%), Gaps = 39/159 (24%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGA---PPTPGRSSPAVMQPPPG-------MPLPPADIG 50
M+S PPPP P P P ++ A PP P + +P V+ P P P PP
Sbjct: 344 MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARA 403
Query: 51 PPPYEP-PGHPMPQ---PGFIPPHMSADGTYMPPGFYPPPG------------PHPPMGY 94
P E P HP+PQ G PP PP PPPG HPP G
Sbjct: 404 APVCETVPVHPLPQGEVQGLPPPP--------PPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 95 YP-----PGPYTPGPYPGPGGHTATVLVPSGAATTVTVL 128
+P PGP+ P P P P +T+ V+
Sbjct: 456 HPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVI 494
Score = 40.8 bits (94), Expect = 8e-04
Identities = 54/189 (28%), Positives = 61/189 (32%), Gaps = 63/189 (33%)
Query: 4 EPPPPYP---GGPTAPL---------LEEKSGAPPTPGRS----SPAVMQPPPGMP---- 43
EPPPP P G P+ L E P GR+ SP PPP +P
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALS 336
Query: 44 ----------LPPADIGPPPYEPPGHPMPQPGFIPPH---MSADGTY--MPPGFYPP-PG 87
PP + PPP PP + P PP A G PP PP
Sbjct: 337 TSSLRASMTSTPPPPVPPPP-PPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQ 395
Query: 88 PHPPM---------------------GYYPPGPYTPGPYPG-----PGGHTATVLVPSGA 121
P PP+ G PP P P P PG P TA PSG
Sbjct: 396 PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 122 ATTVTVLQG 130
T + G
Sbjct: 456 HPTPSTAPG 464
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 62.0 bits (149), Expect = 3e-10
Identities = 50/159 (31%), Positives = 62/159 (38%), Gaps = 39/159 (24%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGA---PPTPGRSSPAVMQPPPG-------MPLPPADIG 50
M+S PPPP P P P ++ A PP P + +P V+ P P P PP
Sbjct: 344 MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARA 403
Query: 51 PPPYEP-PGHPMPQ---PGFIPPHMSADGTYMPPGFYPPPG------------PHPPMGY 94
P E P HP+PQ G PP PP PPPG HPP G
Sbjct: 404 APVCETVPVHPLPQGEVQGLPPPP--------PPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 95 YP-----PGPYTPGPYPGPGGHTATVLVPSGAATTVTVL 128
+P PGP+ P P P P +T+ V+
Sbjct: 456 HPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVI 494
Score = 40.8 bits (94), Expect = 8e-04
Identities = 54/189 (28%), Positives = 61/189 (32%), Gaps = 63/189 (33%)
Query: 4 EPPPPYP---GGPTAPL---------LEEKSGAPPTPGRS----SPAVMQPPPGMP---- 43
EPPPP P G P+ L E P GR+ SP PPP +P
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALS 336
Query: 44 ----------LPPADIGPPPYEPPGHPMPQPGFIPPH---MSADGTY--MPPGFYPP-PG 87
PP + PPP PP + P PP A G PP PP
Sbjct: 337 TSSLRASMTSTPPPPVPPPP-PPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQ 395
Query: 88 PHPPM---------------------GYYPPGPYTPGPYPG-----PGGHTATVLVPSGA 121
P PP+ G PP P P P PG P TA PSG
Sbjct: 396 PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 122 ATTVTVLQG 130
T + G
Sbjct: 456 HPTPSTAPG 464
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 62.0 bits (149), Expect = 3e-10
Identities = 50/159 (31%), Positives = 62/159 (38%), Gaps = 39/159 (24%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGA---PPTPGRSSPAVMQPPPG-------MPLPPADIG 50
M+S PPPP P P P ++ A PP P + +P V+ P P P PP
Sbjct: 344 MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARA 403
Query: 51 PPPYEP-PGHPMPQ---PGFIPPHMSADGTYMPPGFYPPPG------------PHPPMGY 94
P E P HP+PQ G PP PP PPPG HPP G
Sbjct: 404 APVCETVPVHPLPQGEVQGLPPPP--------PPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 95 YP-----PGPYTPGPYPGPGGHTATVLVPSGAATTVTVL 128
+P PGP+ P P P P +T+ V+
Sbjct: 456 HPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVI 494
Score = 40.8 bits (94), Expect = 8e-04
Identities = 54/189 (28%), Positives = 61/189 (32%), Gaps = 63/189 (33%)
Query: 4 EPPPPYP---GGPTAPL---------LEEKSGAPPTPGRS----SPAVMQPPPGMP---- 43
EPPPP P G P+ L E P GR+ SP PPP +P
Sbjct: 277 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALS 336
Query: 44 ----------LPPADIGPPPYEPPGHPMPQPGFIPPH---MSADGTY--MPPGFYPP-PG 87
PP + PPP PP + P PP A G PP PP
Sbjct: 337 TSSLRASMTSTPPPPVPPPP-PPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQ 395
Query: 88 PHPPM---------------------GYYPPGPYTPGPYPG-----PGGHTATVLVPSGA 121
P PP+ G PP P P P PG P TA PSG
Sbjct: 396 PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGL 455
Query: 122 ATTVTVLQG 130
T + G
Sbjct: 456 HPTPSTAPG 464
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 61.6 bits (148), Expect = 5e-10
Identities = 42/117 (35%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 5 PPPPYPGGPTAP--LLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PP P P T P + PP G P PP G+P P G PP PP P
Sbjct: 667 PPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPP-PPPPPPFL 725
Query: 63 QPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPS 119
+PGF P H +PPGF PP PP P TP P P HT + +P+
Sbjct: 726 RPGFNPMH-------LPPGFLPPG---------PPPPITP-PVSIPPPHTPPISIPN 765
Score = 51.6 bits (122), Expect = 5e-07
Identities = 43/131 (32%), Positives = 57/131 (43%), Gaps = 26/131 (19%)
Query: 2 SSEPPPPYPGGPTAPLLEEKS-----GAPPTP--GRSSPA--VMQPPPGMPLPPADIGPP 52
S+ PP PT P+ + S G P P G +P+ ++ PG+ + P
Sbjct: 785 SAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGL----IPLQRP 840
Query: 53 PYEPPGH----PMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYT------ 101
P PP H P+ P +PPHM G PG + P PH G +PP GP+
Sbjct: 841 PGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMP 900
Query: 102 --PGPYPGPGG 110
GP PGPGG
Sbjct: 901 GLGGPGPGPGG 911
Score = 37.7 bits (86), Expect = 0.007
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 16/96 (16%)
Query: 22 SGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSAD------- 74
+ PP P + PA P P PP P+ PG M QP + H + D
Sbjct: 292 AAVPPAPTATVPAAAAPAAASPPPP----QAPFGFPGDGMQQPAY-TQHQNMDQFQPRMM 346
Query: 75 GTYMPPGFY----PPPGPHPPMGYYPPGPYTPGPYP 106
G P + PP G P G P P+ P P
Sbjct: 347 GIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP 382
Score = 35.8 bits (81), Expect = 0.027
Identities = 30/104 (28%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 1 MSSEPPPPYPGGPTAPLLEEKSGAPP----------TPGRSSPAVMQPPPGMPLPPADIG 50
M PPP PGG P G P PG P P PG P
Sbjct: 863 MMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPG---PGPGGPEDRDGRQ 919
Query: 51 PPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGY 94
PP +P P PQ P PP PPP P +
Sbjct: 920 QPPQQPQQQPQPQAPQQPQQQQQQ--QPPPSQQPPPTQQQPQQF 961
Score = 33.9 bits (76), Expect = 0.10
Identities = 38/146 (26%), Positives = 45/146 (30%), Gaps = 46/146 (31%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPP-TPGRSSPAVMQPPPGM---------------PLPPAD 48
PP P GP P+ S PP TP S P ++ G P P +
Sbjct: 735 PPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTN 794
Query: 49 IGPPPYEPP---------------GHPMPQPGFIPPHMSADGTYMPPGFYPP-------- 85
+ PP P G P G + PPG PP
Sbjct: 795 LPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLM 854
Query: 86 -PGPHPPMGYYPPGPYTPGPYPGPGG 110
P P PP + GP PGPGG
Sbjct: 855 PPRPMPPHMMH------RGPPPGPGG 874
Score = 33.1 bits (74), Expect = 0.17
Identities = 38/135 (28%), Positives = 42/135 (31%), Gaps = 33/135 (24%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPT---PGRSSPAVMQPPPGMPL------------------ 44
PP PG P L+ + PP P P V PPP P
Sbjct: 683 PPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPG 742
Query: 45 ------PPADIGPPPYEPP-GHPMPQPGFIPPHMSADGTYMPPGFYPPPG----PHPPMG 93
PP I PPP+ PP P G S D M PP P PP+
Sbjct: 743 PPPPITPPVSI-PPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVT 801
Query: 94 YYPPGPYTPGPYPGP 108
T G PGP
Sbjct: 802 QPVSLLGTQGVAPGP 816
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 61.2 bits (147), Expect = 6e-10
Identities = 43/116 (37%), Positives = 48/116 (41%), Gaps = 23/116 (19%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPP--GHPMPQ 63
PP Y GP A L PP P PPP +P PPA PP PP G+P P
Sbjct: 462 PPAY--GPPAHLPYHPHVYPPNP---------PPPPVPPPPASFPPPAIPPPTPGYPPPP 510
Query: 64 PGFIP---------PHMSADGTYMPPGFYPPPGPHPPMGYYPPG-PYTPGPYPGPG 109
P + P P A + PPG PP +PP P G P P P P PG
Sbjct: 511 PTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPG 566
Score = 57.0 bits (136), Expect = 1e-08
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPP---PGMPLPPADIGP----PPYEPP 57
PPPP P P + + PPTPG P PP P P PP + P PP+ PP
Sbjct: 483 PPPPVPPPPAS--FPPPAIPPPTPGYPPP----PPTYNPNFPPPPPRLPPTHAVPPHPPP 536
Query: 58 GHPMPQPGFIPPHMSADGTYMPPGFYPP-PGPHPPMGYYPPG 98
G +P + PP +PPG PP P P PP G P G
Sbjct: 537 GLGLPPASYPPP-------AVPPGGQPPVPPPIPPPGMPPVG 571
Score = 51.2 bits (121), Expect = 6e-07
Identities = 42/141 (29%), Positives = 46/141 (32%), Gaps = 39/141 (27%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPM---- 61
PPP P A L E P P V PPP P P P P+ PP P
Sbjct: 370 PPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPPPSSYM 429
Query: 62 --------------------------PQPGFIPP------HMSADGTYMPPGFYPPPGPH 89
P G +PP H+ PP PPP P
Sbjct: 430 TGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPP 489
Query: 90 PPMGYYPPG--PYTPGPYPGP 108
PP + PP P TPG YP P
Sbjct: 490 PPASFPPPAIPPPTPG-YPPP 509
Score = 48.5 bits (114), Expect = 4e-06
Identities = 43/138 (31%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 6 PPPYPGGP--------TAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPP 57
P P P P +P E K+ PP P P + P PLPPA PPP P
Sbjct: 323 PSPQPSSPRQVKRAVVVSPKEENKAAEPPPP--KIPKIETTHP--PLPPAH--PPPDRKP 376
Query: 58 GHPMPQP-GFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVL 116
P+ G P D T +P PPP P+ PP P+ P P P P +
Sbjct: 377 --PLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPP-PPPSSYM---- 429
Query: 117 VPSGAATTVTVLQGEIFE 134
+G +TT + + GE ++
Sbjct: 430 --TGMSTTSSYMSGEGYQ 445
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/120 (32%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQP--PPGMPLPPADIGPP---PYEPPGH 59
PPPP P + S +S ++M+ P LPPA GPP PY P +
Sbjct: 420 PPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPA-YGPPAHLPYHPHVY 478
Query: 60 PM-PQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVP 118
P P P +PP ++ PP PP +PP PP Y P P P T VP
Sbjct: 479 PPNPPPPPVPP---PPASFPPPAIPPPTPGYPP----PPPTYNPNFPPPPPRLPPTHAVP 531
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 60.8 bits (146), Expect = 8e-10
Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAP-PTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PPPP P GP + E G+P P+P ++P PPP + L P PPP P P
Sbjct: 141 PPPPGPAPGPPQDISEPPGGSPLPSPPSTAP----PPPPLLLEPP---PPPSMAPPPPPV 193
Query: 63 QPGFIPPH-MSADGTYMPPGFYPPPGPHPPMGYY-PPGPYTPGPY-PGPGG-HT-ATVLV 117
PPH +S+ PP F PP PP+ + PP P P P P P HT T L
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPA---PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 118 PSGAAT 123
P G T
Sbjct: 251 PPGGVT 256
Score = 40.8 bits (94), Expect = 8e-04
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 5 PPPPYPG-----GPTAPLL-------EEKSGAPP-TPGRSSPAVMQPPPGMPLPPADIGP 51
P P PG P +P L +E++G PP P PA PPP PLPPA
Sbjct: 358 PEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPL 417
Query: 52 PPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPP 91
P + H P GF S+ P P P P P
Sbjct: 418 PCAQKAAH--PPAGFTKTPKSSS-----PALKPKPNPPSP 450
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 4 EPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPP--ADIGPPPYEPPGHPM 61
EPPPP P P + E P T SSP++ PP +P P A + PPP P
Sbjct: 179 EPPPPPSMAPPPPPVLEALSPPHT--LSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 62 PQPGFIPPHMSADGTYMPPG 81
P P PH + P G
Sbjct: 237 PAPA--SPHTVGTRLFPPGG 254
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 23/115 (20%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGR------SSPAVMQ-----------PPPGMPLPPAD 48
PP + P + + +++ P PG +SP + Q PPP PLPP
Sbjct: 341 PPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP-- 398
Query: 49 IGPPPYEPPGHPMPQPGFIPPHMSADGTYMPP-GFYPPPGPHPPMGYYPPGPYTP 102
P P PP P P P PP A PP GF P P P P +P
Sbjct: 399 --PAPPLPPPAP-PLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPNPPSP 450
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 2 SSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPM 61
S + PPP P ++ ++E A P + A + P +PLPP+ P +
Sbjct: 301 SFKVPPPTPVRTSSIPVQE---AQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRA 357
Query: 62 PQPGFIPPHMSADGTYMP-----------PGFYPPPGPHPPMGYYPPGPYTPGPYP 106
P+P P + A P PPP P P PP P P P P
Sbjct: 358 PEPD-CPGELKATAPASPRLGQSQSQADERAGTPPPAPPLP----PPAPPLPPPAP 408
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 15/80 (18%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAPPTP--------------GRSSPAVMQPPPGMPLPPADI 49
PPPP P P AP G P GR + A PP P P
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGS 286
Query: 50 GPPPYEPPGHPMPQPGFIPP 69
P P P+ +PP
Sbjct: 287 ALGPNPEPHLTFPRSFKVPP 306
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 17/74 (22%)
Query: 5 PPPPYPGGPTAPLL-----------EEKSGAPPT------PGRSSPAVMQPPPGMPLPPA 47
PP PGG P L E + PT G P ++ PPG+P P
Sbjct: 755 PPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPP 814
Query: 48 DIGPPPYEPPGHPM 61
P E HP+
Sbjct: 815 ASAQPTDELLRHPV 828
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 60.8 bits (146), Expect = 8e-10
Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAP-PTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PPPP P GP + E G+P P+P ++P PPP + L P PPP P P
Sbjct: 141 PPPPGPAPGPPQDISEPPGGSPLPSPPSTAP----PPPPLLLEPP---PPPSMAPPPPPV 193
Query: 63 QPGFIPPH-MSADGTYMPPGFYPPPGPHPPMGYY-PPGPYTPGPY-PGPGG-HT-ATVLV 117
PPH +S+ PP F PP PP+ + PP P P P P P HT T L
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPA---PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 118 PSGAAT 123
P G T
Sbjct: 251 PPGGVT 256
Score = 40.8 bits (94), Expect = 8e-04
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 5 PPPPYPG-----GPTAPLL-------EEKSGAPP-TPGRSSPAVMQPPPGMPLPPADIGP 51
P P PG P +P L +E++G PP P PA PPP PLPPA
Sbjct: 358 PEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPL 417
Query: 52 PPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPP 91
P + H P GF S+ P P P P P
Sbjct: 418 PCAQKAAH--PPAGFTKTPKSSS-----PALKPKPNPPSP 450
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 4 EPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPP--ADIGPPPYEPPGHPM 61
EPPPP P P + E P T SSP++ PP +P P A + PPP P
Sbjct: 179 EPPPPPSMAPPPPPVLEALSPPHT--LSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 62 PQPGFIPPHMSADGTYMPPG 81
P P PH + P G
Sbjct: 237 PAPA--SPHTVGTRLFPPGG 254
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 23/115 (20%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGR------SSPAVMQ-----------PPPGMPLPPAD 48
PP + P + + +++ P PG +SP + Q PPP PLPP
Sbjct: 341 PPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP-- 398
Query: 49 IGPPPYEPPGHPMPQPGFIPPHMSADGTYMPP-GFYPPPGPHPPMGYYPPGPYTP 102
P P PP P P P PP A PP GF P P P P +P
Sbjct: 399 --PAPPLPPPAP-PLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPNPPSP 450
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 2 SSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPM 61
S + PPP P ++ ++E A P + A + P +PLPP+ P +
Sbjct: 301 SFKVPPPTPVRTSSIPVQE---AQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRA 357
Query: 62 PQPGFIPPHMSADGTYMP-----------PGFYPPPGPHPPMGYYPPGPYTPGPYP 106
P+P P + A P PPP P P PP P P P P
Sbjct: 358 PEPD-CPGELKATAPASPRLGQSQSQADERAGTPPPAPPLP----PPAPPLPPPAP 408
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 15/80 (18%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAPPTP--------------GRSSPAVMQPPPGMPLPPADI 49
PPPP P P AP G P GR + A PP P P
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGS 286
Query: 50 GPPPYEPPGHPMPQPGFIPP 69
P P P+ +PP
Sbjct: 287 ALGPNPEPHLTFPRSFKVPP 306
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 17/74 (22%)
Query: 5 PPPPYPGGPTAPLL-----------EEKSGAPPT------PGRSSPAVMQPPPGMPLPPA 47
PP PGG P L E + PT G P ++ PPG+P P
Sbjct: 755 PPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPP 814
Query: 48 DIGPPPYEPPGHPM 61
P E HP+
Sbjct: 815 ASAQPTDELLRHPV 828
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 60.8 bits (146), Expect = 8e-10
Identities = 48/126 (38%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAP-PTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMP 62
PPPP P GP + E G+P P+P ++P PPP + L P PPP P P
Sbjct: 141 PPPPGPAPGPPQDISEPPGGSPLPSPPSTAP----PPPPLLLEPP---PPPSMAPPPPPV 193
Query: 63 QPGFIPPH-MSADGTYMPPGFYPPPGPHPPMGYY-PPGPYTPGPY-PGPGG-HT-ATVLV 117
PPH +S+ PP F PP PP+ + PP P P P P P HT T L
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPA---PPLAFLAPPPPPVPAPAPPAPASPHTVGTRLF 250
Query: 118 PSGAAT 123
P G T
Sbjct: 251 PPGGVT 256
Score = 40.8 bits (94), Expect = 8e-04
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 5 PPPPYPG-----GPTAPLL-------EEKSGAPP-TPGRSSPAVMQPPPGMPLPPADIGP 51
P P PG P +P L +E++G PP P PA PPP PLPPA
Sbjct: 358 PEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPL 417
Query: 52 PPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPP 91
P + H P GF S+ P P P P P
Sbjct: 418 PCAQKAAH--PPAGFTKTPKSSS-----PALKPKPNPPSP 450
Score = 40.0 bits (92), Expect = 0.001
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 4 EPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPP--ADIGPPPYEPPGHPM 61
EPPPP P P + E P T SSP++ PP +P P A + PPP P
Sbjct: 179 EPPPPPSMAPPPPPVLEALSPPHT--LSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAP 236
Query: 62 PQPGFIPPHMSADGTYMPPG 81
P P PH + P G
Sbjct: 237 PAPA--SPHTVGTRLFPPGG 254
Score = 39.3 bits (90), Expect = 0.002
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 23/115 (20%)
Query: 6 PPPYPGGPTAPLLEEKSGAPPTPGR------SSPAVMQ-----------PPPGMPLPPAD 48
PP + P + + +++ P PG +SP + Q PPP PLPP
Sbjct: 341 PPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP-- 398
Query: 49 IGPPPYEPPGHPMPQPGFIPPHMSADGTYMPP-GFYPPPGPHPPMGYYPPGPYTP 102
P P PP P P P PP A PP GF P P P P +P
Sbjct: 399 --PAPPLPPPAP-PLPPAAPPLPCAQKAAHPPAGFTKTPKSSSPALKPKPNPPSP 450
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 2 SSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPM 61
S + PPP P ++ ++E A P + A + P +PLPP+ P +
Sbjct: 301 SFKVPPPTPVRTSSIPVQE---AQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRA 357
Query: 62 PQPGFIPPHMSADGTYMP-----------PGFYPPPGPHPPMGYYPPGPYTPGPYP 106
P+P P + A P PPP P P PP P P P P
Sbjct: 358 PEPD-CPGELKATAPASPRLGQSQSQADERAGTPPPAPPLP----PPAPPLPPPAP 408
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 15/80 (18%)
Query: 5 PPPPYPG-GPTAPLLEEKSGAPPTP--------------GRSSPAVMQPPPGMPLPPADI 49
PPPP P P AP G P GR + A PP P P
Sbjct: 227 PPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGS 286
Query: 50 GPPPYEPPGHPMPQPGFIPP 69
P P P+ +PP
Sbjct: 287 ALGPNPEPHLTFPRSFKVPP 306
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 17/74 (22%)
Query: 5 PPPPYPGGPTAPLL-----------EEKSGAPPT------PGRSSPAVMQPPPGMPLPPA 47
PP PGG P L E + PT G P ++ PPG+P P
Sbjct: 755 PPKTSPGGGEVPCLYKPHCHQSSLSREVAVVMPTLARGGAAGPGEPVEVKEPPGLPAKPP 814
Query: 48 DIGPPPYEPPGHPM 61
P E HP+
Sbjct: 815 ASAQPTDELLRHPV 828
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 60.8 bits (146), Expect = 8e-10
Identities = 44/134 (32%), Positives = 51/134 (38%), Gaps = 26/134 (19%)
Query: 4 EPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPL-----PPADIGPPPYEPPG 58
+ PPP P + P++ + G P G + PA PP P P + GP P PP
Sbjct: 97 QQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPA 156
Query: 59 HPMPQPGFIPPHM----------SADGTYMPPGFYPPPGPHPPMGYYPPGP----YTPGP 104
PG PP A G PP P PGP P G P GP GP
Sbjct: 157 VTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
Query: 105 YPG-------PGGH 111
PG PGGH
Sbjct: 217 KPGGGPGLSTPGGH 230
Score = 58.2 bits (139), Expect = 5e-09
Identities = 45/135 (33%), Positives = 50/135 (37%), Gaps = 23/135 (17%)
Query: 6 PPPYPG-----GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 60
PPP G GP P + PP P Q PP PP PPP++PP HP
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQ--PPPHQPPPHP 91
Query: 61 MPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPG-----PYTP---------GPYP 106
P PP D + P PGP P +G PP P TP GP P
Sbjct: 92 QPHQQQQPPPPPQDSS--KPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGP 149
Query: 107 GPGGHTATVLVPSGA 121
P A P GA
Sbjct: 150 TPTPPPAVTSAPPGA 164
Score = 55.1 bits (131), Expect = 4e-08
Identities = 46/120 (38%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 4 EPPPPYPGGPTAPLLEEKSGAPPTPGRSS-PAVMQ---PPPGM-PLPPADIGPPPYEPPG 58
+PPP P P P ++ PP P SS P V Q P PG+ PPA PP PP
Sbjct: 81 QPPPHQP--PPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPT 138
Query: 59 HPMPQPGFIP---PHMSADGTYMPPGFYPPPGPH------PPMGYYPPGPYTPGPYPGPG 109
P PG P P T PPG PP P PP PP P P PGPG
Sbjct: 139 SGAP-PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPG 197
Score = 50.1 bits (118), Expect = 1e-06
Identities = 39/126 (30%), Positives = 44/126 (34%), Gaps = 16/126 (12%)
Query: 3 SEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGM--------PLPPADIGPPPY 54
S P PP P P P +++ P P P QPPP P PP D P
Sbjct: 54 SGPKPPIP--PPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVV 111
Query: 55 EPPGHPMPQPGFIPPHMSA------DGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGP 108
P P G PP S+ + PPG P P P PP P P P P
Sbjct: 112 AQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPS 171
Query: 109 GGHTAT 114
G T
Sbjct: 172 SGVPTT 177
Score = 44.3 bits (103), Expect = 7e-05
Identities = 36/114 (31%), Positives = 42/114 (36%), Gaps = 28/114 (24%)
Query: 11 GGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGM-----PLPPADIGPPPYEPPGHPMPQPG 65
GG L + +S P + M P PG P+PP PPP++ P PQ
Sbjct: 22 GGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPP----PPPHQQQQQPPPQQ- 76
Query: 66 FIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGP----------YTPGPYPGPG 109
PP PP PPP P P PP P PGP PG G
Sbjct: 77 --PP------PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVG 122
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 60.8 bits (146), Expect = 8e-10
Identities = 41/104 (39%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 12 GPTAPLLEEKSGAPPTPGRSSP-AVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPH 70
GP P G PP P +M+ PP P PP G PP++P PMP PG IPP
Sbjct: 31 GPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPP--FGRPPFDPNMPPMPPPGGIPPP 88
Query: 71 MSADGTYMPPGFYPPPGPHPPMGYYPPGP---YTPG--PYPGPG 109
M PP PP PPM PP P + PG P PG
Sbjct: 89 MG------PPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPG 126
Score = 41.6 bits (96), Expect = 5e-04
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 14/80 (17%)
Query: 1 MSSEPPPPYPG------GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPP- 53
M PPPP P P P + G PP G P +Q PP MP P + + PPP
Sbjct: 56 MRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMG---PPHLQRPPFMPPPMSSMPPPPG 112
Query: 54 -YEPPGHP---MPQPGFIPP 69
PPG P P +PP
Sbjct: 113 MMFPPGMPPVTAPGTPALPP 132
Score = 35.4 bits (80), Expect = 0.035
Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 15/65 (23%)
Query: 50 GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFY----PPPGPHPPMGYYPPGPYTPGPY 105
GP P PP M P PP M PP F PPP P PP G P P P P
Sbjct: 31 GPAP--PPNAVMRGP---PPLMRP-----PPPFGMMRGPPPPPRPPFGRPPFDPNMP-PM 79
Query: 106 PGPGG 110
P PGG
Sbjct: 80 PPPGG 84
Score = 30.8 bits (68), Expect = 0.85
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 3 SEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP-PGHPM 61
S P P T P ++ P P +V QP +P P + PP P PG P+
Sbjct: 320 STPAPTATPVQTVPQPHPQTLPPAVPH----SVPQPTTAIPAFPPVMVPPFRVPLPGMPI 375
Query: 62 PQPGFIP 68
P PG +P
Sbjct: 376 PLPGVLP 382
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 60.8 bits (146), Expect = 8e-10
Identities = 41/104 (39%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 12 GPTAPLLEEKSGAPPTPGRSSP-AVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPH 70
GP P G PP P +M+ PP P PP G PP++P PMP PG IPP
Sbjct: 31 GPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPP--FGRPPFDPNMPPMPPPGGIPPP 88
Query: 71 MSADGTYMPPGFYPPPGPHPPMGYYPPGP---YTPG--PYPGPG 109
M PP PP PPM PP P + PG P PG
Sbjct: 89 MG------PPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAPG 126
Score = 41.6 bits (96), Expect = 5e-04
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 14/80 (17%)
Query: 1 MSSEPPPPYPG------GPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPP- 53
M PPPP P P P + G PP G P +Q PP MP P + + PPP
Sbjct: 56 MRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMG---PPHLQRPPFMPPPMSSMPPPPG 112
Query: 54 -YEPPGHP---MPQPGFIPP 69
PPG P P +PP
Sbjct: 113 MMFPPGMPPVTAPGTPALPP 132
Score = 35.4 bits (80), Expect = 0.035
Identities = 28/65 (43%), Positives = 28/65 (43%), Gaps = 15/65 (23%)
Query: 50 GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFY----PPPGPHPPMGYYPPGPYTPGPY 105
GP P PP M P PP M PP F PPP P PP G P P P P
Sbjct: 31 GPAP--PPNAVMRGP---PPLMRP-----PPPFGMMRGPPPPPRPPFGRPPFDPNMP-PM 79
Query: 106 PGPGG 110
P PGG
Sbjct: 80 PPPGG 84
Score = 28.1 bits (61), Expect = 5.5
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Query: 3 SEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEP-PGHPM 61
S P P T P ++ P P +V QP +P P + PP P PG P+
Sbjct: 320 STPAPTATPVQTVPQPHPQTLPPAVPH----SVPQPTTAIPAFPPVMVPPFRVPLPGMPI 375
Query: 62 PQPGFIPPH---------MSADGTYMPPGFYPP--PGPHP 90
P PG ++ T + PG PP P HP
Sbjct: 376 PLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHP 415
Score = 27.3 bits (59), Expect = 9.4
Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 20/128 (15%)
Query: 22 SGAPPTPGRSSPA--------VMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSA 73
S A PT S+PA V QP P LPPA P+ P P F PP M
Sbjct: 311 SVATPTVSVSTPAPTATPVQTVPQPHP-QTLPPA----VPHSVPQPTTAIPAF-PPVM-- 362
Query: 74 DGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIF 133
+PP P PG P+ PY T T ++P A V ++ ++
Sbjct: 363 ----VPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVA 418
Query: 134 EGAPVQTV 141
A T+
Sbjct: 419 IAASPATL 426
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 60.8 bits (146), Expect = 8e-10
Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 16/124 (12%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPGRSSPAVMQ---------PPPGMPL-PPADI 49
S+ PPP+PG P P + + G PP PG+ Q P PG P PP+
Sbjct: 173 SQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQG 232
Query: 50 GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPG---FYPPPGPHPPMGYYPPGPYTPGPYP 106
G P PP HP G P + PPG PPPG +P PP GP P
Sbjct: 233 GNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPP 292
Query: 107 GPGG 110
P G
Sbjct: 293 PPQG 296
Score = 51.2 bits (121), Expect = 6e-07
Identities = 42/120 (35%), Positives = 48/120 (40%), Gaps = 19/120 (15%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPGRSSPAVMQ---------PPPGMPL-PPADI 49
S+ PPP PG P P + + G PP PG+ Q P PG P PP
Sbjct: 110 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG 169
Query: 50 GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPG 109
G PP HP +P PP PP P GP PP G G + GP P PG
Sbjct: 170 GNQSQGPPPHP-GKPEGPPPQGGNQSQGPPPRPGKPEGP-PPQG----GNQSQGPPPRPG 223
Score = 50.8 bits (120), Expect = 8e-07
Identities = 43/120 (35%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPGRSSPAVMQPPPG-------MPLPPADIGPP 52
S+ PPP PG P P + + G PP PG+ QPP G P P GPP
Sbjct: 68 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG---QPPQGGNQSQGPPPRPGKPEGPP 124
Query: 53 PY--EPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYTPGPYPGPG 109
P P P+PG P G G PPP P P G P G + GP P PG
Sbjct: 125 PQGGNQSQGPPPRPG-KPEGPPPQGGNQSQG--PPPRPGKPEGPPPQGGNQSQGPPPHPG 181
Score = 50.8 bits (120), Expect = 8e-07
Identities = 38/110 (34%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPG---------RSSPAVMQPPPGMPL-PPADI 49
S+ PPP PG P P + + G PP PG + P P PG P PP
Sbjct: 194 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQE 253
Query: 50 GPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGP 99
G P PP PQ G PP + PP P P PP G P P
Sbjct: 254 GNKPQRPPPPGRPQ-GPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP 302
Score = 50.1 bits (118), Expect = 1e-06
Identities = 48/155 (30%), Positives = 56/155 (36%), Gaps = 42/155 (27%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPGRSSPAVMQ---------PPPGMPLPPADIG 50
S+ PPP PG P P + + G PP PG+ Q P PG P P G
Sbjct: 131 SQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG 190
Query: 51 --------PPPYEPPG----------HPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPM 92
P P +P G P P+PG P + G P G PPP P P
Sbjct: 191 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG-KPEGPPSQGGNKPQG--PPPHPGKPQ 247
Query: 93 G---------YYPPGPYTPGPYPGPGGHTATVLVP 118
G PP P P P PGG+ L P
Sbjct: 248 GPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
Score = 48.5 bits (114), Expect = 4e-06
Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 3 SEPPPPYPGGPTAPLLE---EKSGAPPTPGRSSPAVMQ--------PPPGMPLPPADIGP 51
S+ PPP PG P P + + G PP PG+ Q PPPG P P G
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGG 274
Query: 52 PPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPP 85
P +P P +P PP + PP PP
Sbjct: 275 NPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 43.5 bits (101), Expect = 1e-04
Identities = 37/112 (33%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 5 PPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPP------G 58
PPP P G + G PP PG+ Q PP G P +PP
Sbjct: 52 PPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQ 111
Query: 59 HPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYTPGPYPGPG 109
P P+PG P G G PPP P P G P G + GP P PG
Sbjct: 112 GPPPRPG-KPEGPPPQGGNQSQG--PPPRPGKPEGPPPQGGNQSQGPPPRPG 160
Score = 41.6 bits (96), Expect = 5e-04
Identities = 39/106 (36%), Positives = 41/106 (38%), Gaps = 20/106 (18%)
Query: 7 PPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPY--EPPGHPMPQP 64
PP PG P G PP G S Q PP P P GPPP P P+P
Sbjct: 51 PPPPGKP--------EGRPPQGGNQS----QGPP--PRPGKPEGPPPQGGNQSQGPPPRP 96
Query: 65 GFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPP-GPYTPGPYPGPG 109
G P G G PPP P P G P G + GP P PG
Sbjct: 97 G-KPEGQPPQGGNQSQG--PPPRPGKPEGPPPQGGNQSQGPPPRPG 139
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 60.1 bits (144), Expect = 1e-09
Identities = 44/130 (33%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 5 PPPPYPGGPTAPLLEEKSGA-----PPTPGRSSPA--VMQPPPGMPLPPADIGPPPYEPP 57
PPPP P AP ++ A PP+PG + P + P PPA PP PP
Sbjct: 134 PPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP 193
Query: 58 GHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLV 117
P P PP ++A +PP PP P PP PP P P P P G
Sbjct: 194 AGPRRAP---PPAVAAREPPLPP---PPQPPAPPQQQQPP---PPQPQPPPEGGAVRA-- 242
Query: 118 PSGAATTVTV 127
GAA V++
Sbjct: 243 -GGAARPVSL 251
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/95 (33%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Query: 25 PPTPGRSSPAVMQPPPGMPLPPADIGPPPYE-PPGHPMPQPGFIP---PHMSADGTYMPP 80
PP G + PA + P G P A PPP PP P P P P +A PP
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPP 160
Query: 81 GFYP-PPGPH----PPMGYYPPGPYTPGPYPGPGG 110
P PGP P+ PP P P P G
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Score = 29.3 bits (64), Expect = 2.5
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 8 PYPGGPT------APLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPG 58
P PG T A + +E A G SP+ + PPG P P G P PPG
Sbjct: 395 PAPGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGADGTPFGCPPG 451
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.145 0.504
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,560,545
Number of Sequences: 37866
Number of extensions: 1566213
Number of successful extensions: 31972
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 1439
Number of HSP's that attempted gapping in prelim test: 8409
Number of HSP's gapped (non-prelim): 11616
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.