Guide to the Human Genome
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Search of human proteins with 239751789

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751789 PREDICTED: hypothetical protein [Homo sapiens]
         (203 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751789 PREDICTED: hypothetical protein [Homo sapiens]           410   e-115
gi|239746280 PREDICTED: hypothetical protein XP_002343722 [Homo ...   348   2e-96
gi|239746652 PREDICTED: hypothetical protein [Homo sapiens]            32   0.28 
gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Ho...    31   0.83 
gi|7662162 ALEX2 protein [Homo sapiens]                                30   1.4  
gi|29540562 ALEX2 protein [Homo sapiens]                               30   1.4  
gi|209447073 synaptotagmin I [Homo sapiens]                            28   4.1  
gi|5032139 synaptotagmin I [Homo sapiens]                              28   4.1  
gi|209447070 synaptotagmin I [Homo sapiens]                            28   4.1  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       28   4.1  
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]        28   5.3  
gi|144922665 G protein-coupled receptor 123 [Homo sapiens]             28   5.3  
gi|94538350 protocadherin 17 precursor [Homo sapiens]                  28   5.3  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...    28   5.3  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...    28   5.3  
gi|4503657 forkhead box H1 [Homo sapiens]                              28   7.0  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    28   7.0  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    28   7.0  
gi|41352705 kinesin family member 3C [Homo sapiens]                    28   7.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...    28   7.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...    28   7.0  
gi|28872761 myotubularin-related protein 1 [Homo sapiens]              28   7.0  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    27   9.1  
gi|116089282 APG9 autophagy 9-like 1 [Homo sapiens]                    27   9.1  
gi|116089287 APG9 autophagy 9-like 1 [Homo sapiens]                    27   9.1  

>gi|239751789 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 203

 Score =  410 bits (1054), Expect = e-115
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MAVPPLSPALKRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEA 60
           MAVPPLSPALKRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEA
Sbjct: 1   MAVPPLSPALKRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEA 60

Query: 61  VVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVTLLRAQVVY 120
           VVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVTLLRAQVVY
Sbjct: 61  VVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVTLLRAQVVY 120

Query: 121 ALAEDKVVTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEKPQPLGRLQNHVSALGGHPH 180
           ALAEDKVVTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEKPQPLGRLQNHVSALGGHPH
Sbjct: 121 ALAEDKVVTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEKPQPLGRLQNHVSALGGHPH 180

Query: 181 AAHSHRQGHSLAVHGSHGLTCCP 203
           AAHSHRQGHSLAVHGSHGLTCCP
Sbjct: 181 AAHSHRQGHSLAVHGSHGLTCCP 203


>gi|239746280 PREDICTED: hypothetical protein XP_002343722 [Homo
           sapiens]
          Length = 186

 Score =  348 bits (892), Expect = 2e-96
 Identities = 173/175 (98%), Positives = 173/175 (98%)

Query: 29  PPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGL 88
           P  APTHRQVSAIMGAATILDRDADTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGL
Sbjct: 12  PGDAPTHRQVSAIMGAATILDRDADTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGL 71

Query: 89  HGHASCLTGRRVGCQAAAQEGFVTLLRAQVVYALAEDKVVTPVAIEVPTEATEPSTEGAG 148
           HGHASCLTGRRVGCQAAAQEGFVTLLRAQVVYALAEDKVVTPVAIEVPTEATEPSTEGAG
Sbjct: 72  HGHASCLTGRRVGCQAAAQEGFVTLLRAQVVYALAEDKVVTPVAIEVPTEATEPSTEGAG 131

Query: 149 DGHEEVGIAIKEKPQPLGRLQNHVSALGGHPHAAHSHRQGHSLAVHGSHGLTCCP 203
           DGHEEVGIAIKEKPQPLGRLQNHVSALGGHPHAAHSHRQGHSLAVHGSHGLTCCP
Sbjct: 132 DGHEEVGIAIKEKPQPLGRLQNHVSALGGHPHAAHSHRQGHSLAVHGSHGLTCCP 186


>gi|239746652 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1513

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 13/141 (9%)

Query: 52   ADTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFV 111
            A  + KQ+A   +T    A G   E       +    HG A+ +    V  + AAQ G  
Sbjct: 1201 AQAIAKQDAAHGITNEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVANEDAAQ-GVA 1259

Query: 112  TLLRAQ------VVYALAEDKVVTPVAIEVPTE--ATEPSTEGAGDGHEEVGIAIKEKPQ 163
              + AQ       V+ +A +  V  VA EV  +  A + + +G  +     G+A ++  Q
Sbjct: 1260 NEVAAQGVANEDAVHGVANEDAVQGVANEVEVQGIAHKDAIQGIANEDAAQGVANEDAAQ 1319

Query: 164  PLGRLQNHVSALG-GHPHAAH 183
             +    N V+A G  +  AAH
Sbjct: 1320 GVA---NEVAAHGVANEDAAH 1337


>gi|239757639 PREDICTED: similar to collagen, type I, alpha 2 [Homo
            sapiens]
          Length = 2378

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 19/155 (12%)

Query: 52   ADTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFV 111
            A  + KQ+A   +T    A G   E       +    HG A+ +    V  + AAQ G  
Sbjct: 2093 AQAIAKQDAAHGITKEDAAQGVTNEVAAQGVANEDAAHGVANEVAAHGVANEDAAQ-GVA 2151

Query: 112  TLLRAQVVYALAEDKVVTPVAIEVPTE-----------ATEPSTEGAGDGHEEVGIAIKE 160
              + AQ    +A +  V  VA EV  +           A E + +G  +     G+A ++
Sbjct: 2152 NEVAAQ---GVANEDAVQGVANEVEVQGIAHKDAIQGIANEDAAQGVANEVAAHGVANED 2208

Query: 161  KPQPLGRLQNHVSALGGHPHAAHSHRQGHSLAVHG 195
              Q +    N V+A G     A +    + +AVHG
Sbjct: 2209 AAQGVA---NEVAAQGVANEDA-AQGVANEVAVHG 2239


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 53  DTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVT 112
           DT+G +    A ++ +   GA  +A E+     AG+   A  + G  +    A   G   
Sbjct: 91  DTVGAEAVAPAASSAEAQSGAGSQAQEADG---AGVGPKAESVVGAAMASAIAPPPGVTE 147

Query: 113 LLRAQVVYALA-------------EDKVVTPVAIEVPTEATEPS--TEGAG 148
            L A    A+A               +   P    VPTEA  P+  TEG G
Sbjct: 148 ALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPG 198


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 18/111 (16%)

Query: 53  DTLGKQEAVVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVT 112
           DT+G +    A ++ +   GA  +A E+     AG+   A  + G  +    A   G   
Sbjct: 91  DTVGAEAVAPAASSAEAQSGAGSQAQEADG---AGVGPKAESVVGAAMASAIAPPPGVTE 147

Query: 113 LLRAQVVYALA-------------EDKVVTPVAIEVPTEATEPS--TEGAG 148
            L A    A+A               +   P    VPTEA  P+  TEG G
Sbjct: 148 ALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPG 198


>gi|209447073 synaptotagmin I [Homo sapiens]
          Length = 422

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 128 VTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEK 161
           VT VA  +P+ ATEP++   G+G E+    +KEK
Sbjct: 15  VTTVATVLPSNATEPAS--PGEGKEDAFSKLKEK 46


>gi|5032139 synaptotagmin I [Homo sapiens]
          Length = 422

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 128 VTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEK 161
           VT VA  +P+ ATEP++   G+G E+    +KEK
Sbjct: 15  VTTVATVLPSNATEPAS--PGEGKEDAFSKLKEK 46


>gi|209447070 synaptotagmin I [Homo sapiens]
          Length = 422

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 128 VTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEK 161
           VT VA  +P+ ATEP++   G+G E+    +KEK
Sbjct: 15  VTTVATVLPSNATEPAS--PGEGKEDAFSKLKEK 46


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%)

Query: 124  EDKVVTPVAIEVPTEATEPSTEGAG-------DGHEEVGIAIKEKPQPLG 166
            ++KV  P A+++P +    S +  G       +G EE  + IKEKP+  G
Sbjct: 4870 QEKVPEPEALDLPDDLNLDSEDKNGGEDTDNEEGEEENPLEIKEKPEEAG 4919


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 44/201 (21%)

Query: 1   MAVPPLSPALKRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEA 60
           M+ PP  PAL    +     L+ + P+ PP A ++  V+A   AA+              
Sbjct: 287 MSSPPPPPALPPMHRYDMAGLQ-YSPMMPPGAQSYMNVAAAAAAAS-------------- 331

Query: 61  VVALTALKTAGGAAREAGESRTGSLAGLHGHASCLTGRRVGCQAAAQEGFVTLLRAQVVY 120
                     GG A  A    T + A  +G             AA   G         + 
Sbjct: 332 --------GYGGMAPSA----TAAAAAAYGQQPATAAAAAAAAAAMSLG--------PMG 371

Query: 121 ALAEDKVVTPVAIEVPTEATEPSTEGAGDGHEEVGIAIKEKPQPLGRLQNHVSAL-GGHP 179
           ++ + +  +P     P  A+       GD  + + + +     P G   +  S L GG  
Sbjct: 372 SVVKSEPSSPP----PAIASHSQRACLGDLRDMISMYLP----PGGDAADAASPLPGGRL 423

Query: 180 HAAHSHRQGHSLAVHGSHGLT 200
           H  H H QG   AV+G+  LT
Sbjct: 424 HGVHQHYQGAGTAVNGTVPLT 444


>gi|144922665 G protein-coupled receptor 123 [Homo sapiens]
          Length = 560

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 14/82 (17%)

Query: 15  QNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVALTALKTAGGAA 74
           +++W   + ++  CPP+   H            LD +   LG+  A +    L    G A
Sbjct: 311 EDVW---QCWWACCPPRKDAH----------PALDANGAALGRA-ACLHSPGLGQPRGFA 356

Query: 75  REAGESRTGSLAGLHGHASCLT 96
              G  +  +L    GHASCL+
Sbjct: 357 HPPGPCKMTNLQAAQGHASCLS 378


>gi|94538350 protocadherin 17 precursor [Homo sapiens]
          Length = 1159

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 96   TGRRVGCQAAAQEGFVTLLRAQVVYALAEDKVVTPVAIEVPTEATEP---------STEG 146
            TG++  C     +   T+L A V   L   + ++P+  EVP+ ++ P         ST+G
Sbjct: 993  TGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCTSTKG 1052

Query: 147  AGDGHEEVGIAIKE 160
            + DG E    A+ E
Sbjct: 1053 SLDGCEAKPGALAE 1066


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 13  SAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVAL 64
           S QN W+S +LF    P           +  A  +LDRDA    KQ  VVA+
Sbjct: 598 SGQNAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDA---LKQSLVVAV 646


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 13  SAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVAL 64
           S QN W+S +LF    P           +  A  +LDRDA    KQ  VVA+
Sbjct: 598 SGQNAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDA---LKQSLVVAV 646


>gi|4503657 forkhead box H1 [Homo sapiens]
          Length = 365

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 16/89 (17%)

Query: 2   AVPPLSPALKRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAV 61
           AVP  +P L  S + LW       PLCP   PT  +   + G A        TL  +   
Sbjct: 203 AVP--TPPLPSSERPLW-------PLCPLPGPTRVEGETVQGGAI----GPSTLSPEPRA 249

Query: 62  VALTALKTAGGAAREAGESRTGSLAGLHG 90
             L  L+   G A   G S  G  A L G
Sbjct: 250 WPLHLLQ---GTAVPGGRSSGGHRASLWG 275


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 55   LGKQEAVVALTALKTAGGAAREAGESRTGSLAG--LHGHASCLTGRRVGCQAAAQEGFVT 112
            +G +E   +     T G +AR   +       G  L  HA CL G  +G  +  Q+    
Sbjct: 1508 VGLEEEAQSFAQFVTTGESARIKAKLTQIRRYGEELREHAQCLEGTILGHLSQQQKFEEN 1567

Query: 113  LLRAQVVYALAEDKVVTPVAIEVPTEATE 141
            L + Q   +  EDK+  P  I++ + ATE
Sbjct: 1568 LRKIQQSVSEFEDKLAVP--IKICSSATE 1594


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 55   LGKQEAVVALTALKTAGGAAREAGESRTGSLAG--LHGHASCLTGRRVGCQAAAQEGFVT 112
            +G +E   +     T G +AR   +       G  L  HA CL G  +G  +  Q+    
Sbjct: 1501 VGLEEEAQSFAQFVTTGESARIKAKLTQIRRYGEELREHAQCLEGTILGHLSQQQKFEEN 1560

Query: 113  LLRAQVVYALAEDKVVTPVAIEVPTEATE 141
            L + Q   +  EDK+  P  I++ + ATE
Sbjct: 1561 LRKIQQSVSEFEDKLAVP--IKICSSATE 1587


>gi|41352705 kinesin family member 3C [Homo sapiens]
          Length = 793

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 139 ATEPSTEGAGDGHEEVGIAIKEKPQPLGRLQNHVSALGGHPHAAHSHRQGH 189
           A  PS+ G G G    G A  E+P+   ++   +SALG    A   +R  H
Sbjct: 264 AATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTH 314


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 11  KRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVAL 64
           K S QN W+S +L     P           +  A  +LDRDA    KQ  VVA+
Sbjct: 597 KDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDA---LKQSLVVAV 647


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 11  KRSAQNLWVSLKLFYPLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVAL 64
           K S QN W+S +L     P           +  A  +LDRDA    KQ  VVA+
Sbjct: 597 KDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDA---LKQSLVVAV 647


>gi|28872761 myotubularin-related protein 1 [Homo sapiens]
          Length = 665

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 6   LSPALKRSAQNLWVSLKLFY-PLCPPQAPTHRQVSAIMGAATILDRDADTLGKQEAVVAL 64
           L P    S   LWV+  + + P   PQ P H+ +  ++     L +  + L ++ A  A+
Sbjct: 585 LYPVASLSHLELWVNYYVRWNPRMRPQMPIHQNLKELLAVRAELQKRVEGLQREVATRAV 644

Query: 65  TALKTAGGAAREAGES 80
           ++    G +   +  S
Sbjct: 645 SSSSERGSSPSHSATS 660


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 136  PTEATEPSTEGAGDG--HEEVGIAIKEKPQPLGRL 168
            P+  T P+TEG GDG  + +  +   EK + LG+L
Sbjct: 1981 PSTPTTPTTEGEGDGLSYNQRSLQRWEKDEELGQL 2015


>gi|116089282 APG9 autophagy 9-like 1 [Homo sapiens]
          Length = 839

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 4   PPLSPALKRSAQNLWVS--LKLFYPLCPPQAPTHRQVSAIMGA 44
           PPL   L+ S     V+  L+ F PL P QAPT R  S + G+
Sbjct: 633 PPLPRDLQGSRHRAEVASALRSFSPLQPGQAPTGRAHSTMTGS 675


>gi|116089287 APG9 autophagy 9-like 1 [Homo sapiens]
          Length = 839

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 4   PPLSPALKRSAQNLWVS--LKLFYPLCPPQAPTHRQVSAIMGA 44
           PPL   L+ S     V+  L+ F PL P QAPT R  S + G+
Sbjct: 633 PPLPRDLQGSRHRAEVASALRSFSPLQPGQAPTGRAHSTMTGS 675


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,316,258
Number of Sequences: 37866
Number of extensions: 356183
Number of successful extensions: 1177
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1167
Number of HSP's gapped (non-prelim): 30
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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