Guide to the Human Genome
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Name: GPR123 Sequence: fasta or formatted (560aa) NCBI GI: 144922665
Description:

G protein-coupled receptor 123

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         55           3
 C cysteine            4.3         24           2
 D aspartate           3.2         18           1
 E glutamate           3.9         22           2
 F phenylalanine       4.5         25           1
 G glycine             9.3         52           2
 H histidine           4.5         25           2
 I isoleucine          3.0         17           2
 K lysine              2.5         14           2
 L leucine            10.4         58           2
 M methionine          1.6          9           1
 N asparagine          2.0         11           1
 P proline             9.3         52           2
 Q glutamine           4.1         23           1
 R arginine            5.5         31           2
 S serine              5.2         29           2
 T threonine           7.5         42           2
 V valine              4.6         26           2
 W tryptophan          1.4          8           2
 Y tyrosine            3.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 123 
GPR125                0.334   G protein-coupled receptor 125 
GPR124                0.271   G protein-coupled receptor 124 
CELSR1                0.060   cadherin EGF LAG seven-pass G-type receptor 1 
CELSR3                0.053   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
LPHN3                 0.047   latrophilin 3 precursor 
LPHN1                 0.045   latrophilin 1 isoform 1 precursor 
LPHN1                 0.045   latrophilin 1 isoform 2 precursor 
LPHN2                 0.043   latrophilin 2 precursor 
GPR133                0.039   G protein-coupled receptor 133 
BAI2                  0.039   brain-specific angiogenesis inhibitor 2 
GPR126                0.038   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.038   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.038   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.038   G protein-coupled receptor 126 beta 2 precursor [Hom...
CELSR2                0.036   cadherin EGF LAG seven-pass G-type receptor 2 
BAI3                  0.034   brain-specific angiogenesis inhibitor 3 
CD97                  0.034   CD97 antigen isoform 3 precursor 
CD97                  0.034   CD97 antigen isoform 2 precursor 
CD97                  0.034   CD97 antigen isoform 1 precursor 
ELTD1                 0.033   EGF, latrophilin and seven transmembrane domain con...
GPR112                0.032   G-protein coupled receptor 112 
EMR3                  0.032   egf-like module-containing mucin-like receptor 3 [H...
GPR64                 0.031   G protein-coupled receptor 64 isoform 3 
GPR64                 0.031   G protein-coupled receptor 64 isoform 2 
GPR64                 0.031   G protein-coupled receptor 64 isoform 1 
GPR64                 0.031   G protein-coupled receptor 64 isoform 4 
EMR2                  0.031   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.031   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.031   egf-like module containing, mucin-like, hormone rece...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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