Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239751469
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751469 PREDICTED: hypothetical protein [Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751469 PREDICTED: hypothetical protein [Homo sapiens] 608 e-174
gi|66912172 hairy and enhancer of split 3 [Homo sapiens] 40 0.002
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.019
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.019
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.019
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 37 0.019
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 35 0.072
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 35 0.094
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 35 0.094
gi|157785645 SPEG complex locus [Homo sapiens] 35 0.094
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 34 0.12
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 33 0.21
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 33 0.21
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 33 0.21
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.36
gi|13375926 vacuolar protein sorting 37B [Homo sapiens] 32 0.47
gi|118402590 myosin XV [Homo sapiens] 32 0.61
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 32 0.61
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 32 0.61
gi|115511036 alpha-kinase 3 [Homo sapiens] 32 0.61
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 32 0.61
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 32 0.80
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 32 0.80
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 32 0.80
gi|149944516 tet oncogene family member 3 [Homo sapiens] 32 0.80
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 32 0.80
gi|77917617 hypothetical protein LOC54463 isoform 1 [Homo sapiens] 32 0.80
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 31 1.0
gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo ... 31 1.0
gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo... 31 1.0
>gi|239751469 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 608 bits (1569), Expect = e-174
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MHQSLLGCQRTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVP 60
MHQSLLGCQRTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVP
Sbjct: 1 MHQSLLGCQRTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVP 60
Query: 61 RPHAGLQATCPWISPSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMWLKVAPCKCKA 120
RPHAGLQATCPWISPSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMWLKVAPCKCKA
Sbjct: 61 RPHAGLQATCPWISPSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMWLKVAPCKCKA 120
Query: 121 SGSPTFILGKGIRLQVPQLPSSCLWCSRKPGMCTALSPAVGSWSRGIPVEGVLLSPCAHS 180
SGSPTFILGKGIRLQVPQLPSSCLWCSRKPGMCTALSPAVGSWSRGIPVEGVLLSPCAHS
Sbjct: 121 SGSPTFILGKGIRLQVPQLPSSCLWCSRKPGMCTALSPAVGSWSRGIPVEGVLLSPCAHS 180
Query: 181 LRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRRLPRGLNILPLPDA 240
LRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRRLPRGLNILPLPDA
Sbjct: 181 LRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRRLPRGLNILPLPDA 240
Query: 241 QGLAWGASWKCHRLPLHSLVTHFPPTGFLNKCFQQFDP 278
QGLAWGASWKCHRLPLHSLVTHFPPTGFLNKCFQQFDP
Sbjct: 241 QGLAWGASWKCHRLPLHSLVTHFPPTGFLNKCFQQFDP 278
>gi|66912172 hairy and enhancer of split 3 [Homo sapiens]
Length = 186
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 19 PSGWAMGHPSCSPRTPVPPM---SSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISP 75
P+ WA + PR+P P + S+PGSS + P A C P GL+ PW SP
Sbjct: 122 PAVWAPAPAAGGPRSPPPLLLLPESLPGSSASVPPPQPASSRCAESPGLGLRVWRPWGSP 181
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.019
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 18 LPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSP 77
LP G G P P P+PP P S + P G P P P + PSP
Sbjct: 415 LPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSP 474
Query: 78 PTELL 82
P++++
Sbjct: 475 PSQVI 479
Score = 28.1 bits (61), Expect = 8.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 28 SCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTELLQDLSN 87
S +P P PP+ S +S S P VP P P PP LQ +
Sbjct: 321 SPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPP------------PPPPATALQAPAV 368
Query: 88 PPP 90
PPP
Sbjct: 369 PPP 371
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.019
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 18 LPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSP 77
LP G G P P P+PP P S + P G P P P + PSP
Sbjct: 415 LPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSP 474
Query: 78 PTELL 82
P++++
Sbjct: 475 PSQVI 479
Score = 28.1 bits (61), Expect = 8.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 28 SCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTELLQDLSN 87
S +P P PP+ S +S S P VP P P PP LQ +
Sbjct: 321 SPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPP------------PPPPATALQAPAV 368
Query: 88 PPP 90
PPP
Sbjct: 369 PPP 371
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.019
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 18 LPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSP 77
LP G G P P P+PP P S + P G P P P + PSP
Sbjct: 415 LPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSP 474
Query: 78 PTELL 82
P++++
Sbjct: 475 PSQVI 479
Score = 28.1 bits (61), Expect = 8.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 28 SCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTELLQDLSN 87
S +P P PP+ S +S S P VP P P PP LQ +
Sbjct: 321 SPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPP------------PPPPATALQAPAV 368
Query: 88 PPP 90
PPP
Sbjct: 369 PPP 371
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.019
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 18 LPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSP 77
LP G G P P P+PP P S + P G P P P + PSP
Sbjct: 415 LPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPSP 474
Query: 78 PTELL 82
P++++
Sbjct: 475 PSQVI 479
Score = 28.1 bits (61), Expect = 8.8
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 12/63 (19%)
Query: 28 SCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTELLQDLSN 87
S +P P PP+ S +S S P VP P P PP LQ +
Sbjct: 321 SPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPP------------PPPPATALQAPAV 368
Query: 88 PPP 90
PPP
Sbjct: 369 PPP 371
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 35.0 bits (79), Expect = 0.072
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 27 PSCSPRTPVPPMSSIPGSSGCLGVPFS-----APEGCVPRPHAGLQATCPWISPSPPTEL 81
P PR P PP S G V F+ +P G P P + P S S + L
Sbjct: 994 PETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLL 1053
Query: 82 LQDLSNPPPRSHKQQQG 98
L S+PPP Q++G
Sbjct: 1054 LPPASSPPPPQVPQRRG 1070
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 34.7 bits (78), Expect = 0.094
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 17/81 (20%)
Query: 27 PSCSPRTPVPPMSSIPGSSGCLGVPFSAP-EGCVPRP-----------HAGLQATCPWIS 74
PS R PVPP +PG SG + P AP + P P G+ + P
Sbjct: 565 PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSL 624
Query: 75 P-----SPPTELLQDLSNPPP 90
P SPP L D + PPP
Sbjct: 625 PGGTAISPPPPLSGDATIPPP 645
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 34.7 bits (78), Expect = 0.094
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 17/81 (20%)
Query: 27 PSCSPRTPVPPMSSIPGSSGCLGVPFSAP-EGCVPRP-----------HAGLQATCPWIS 74
PS R PVPP +PG SG + P AP + P P G+ + P
Sbjct: 574 PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSL 633
Query: 75 P-----SPPTELLQDLSNPPP 90
P SPP L D + PPP
Sbjct: 634 PGGTAISPPPPLSGDATIPPP 654
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 34.7 bits (78), Expect = 0.094
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 30 SPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCP--------WISPSPPTEL 81
SP +P P S S +G P P PR H GLQA P ++PS P
Sbjct: 2820 SPSSPPTPPSQALSSLKAVGPPPQTP----PRRHRGLQAARPAEPTLPSTHVTPSEPKPF 2875
Query: 82 LQDLSNPPPRSHKQ 95
+ D P P S Q
Sbjct: 2876 VLDTGTPIPASTPQ 2889
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 34.3 bits (77), Expect = 0.12
Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 17 MLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPS 76
M+P+ A HPS S TP P M +PG+ VP +AP G P P P P
Sbjct: 1033 MIPTVAANIHPSGSGPTP-PGMPPMPGNILGPRVPLTAPNGMYPPP--------PQQQPP 1083
Query: 77 PPTELLQDLSNPPP 90
PP D PPP
Sbjct: 1084 PPPP--ADGVPPPP 1095
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 33.5 bits (75), Expect = 0.21
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 168 PVEGVLLSPCAHSLRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRR 227
P G L P SL GS W PQ G+ S G C+H A CG G+W R
Sbjct: 150 PSPGGLRGP--RSLSGSSPWRGPQ-----GSLCKS--GLCCAHPVRPAGHVACGAGIWTR 200
Query: 228 LPRGLNILPLPDAQGLAWGASWKCHRLPLHSLVTHFPPTG 267
G + + A G A + +P L H PTG
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKWVPCQPLSQH--PTG 238
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 33.5 bits (75), Expect = 0.21
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 168 PVEGVLLSPCAHSLRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRR 227
P G L P SL GS W PQ G+ S G C+H A CG G+W R
Sbjct: 150 PSPGGLRGP--RSLSGSSPWRGPQ-----GSLCKS--GLCCAHPVRPAGHLACGAGIWTR 200
Query: 228 LPRGLNILPLPDAQGLAWGASWKCHRLPLHSLVTHFPPTG 267
G + + A G A + +P L H PTG
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKWVPCQPLSQH--PTG 238
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 33.5 bits (75), Expect = 0.21
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 168 PVEGVLLSPCAHSLRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLSPCGLGLWRR 227
P G L P SL GS W PQ G+ S G C+H A CG G+W R
Sbjct: 150 PSPGGLRGP--RSLSGSSPWRGPQ-----GSLCKS--GLCCAHPVRPAGHVACGAGIWTR 200
Query: 228 LPRGLNILPLPDAQGLAWGASWKCHRLPLHSLVTHFPPTG 267
G + + A G A + +P L H PTG
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKWVPCQPLSQH--PTG 238
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 32.7 bits (73), Expect = 0.36
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Query: 19 PSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCV-----PRPHAGLQATCPWI 73
P G G P+ +P P P + GS+G P A G P P A A P +
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGV 342
Query: 74 SPSPPTELLQ 83
P ++Q
Sbjct: 343 KAESPKRVVQ 352
Score = 28.1 bits (61), Expect = 8.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 30 SPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTE 80
SPR P+ P P ++ P + C P P A A P +P+ P +
Sbjct: 109 SPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
>gi|13375926 vacuolar protein sorting 37B [Homo sapiens]
Length = 285
Score = 32.3 bits (72), Expect = 0.47
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 18/94 (19%)
Query: 19 PSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPR-PHAGLQATCPWISPSP 77
P+ A G P+ +PR PP +P +G L PF+A P+ GLQ CP + P
Sbjct: 192 PAPEASGPPAVAPRRIPPPPPPVP--AGRLATPFTAAMSSGQAVPYPGLQ--CPPLPPRV 247
Query: 78 PTELLQDLSN-------------PPPRSHKQQQG 98
Q S+ PPPR Q G
Sbjct: 248 GLPTQQGFSSQFVSPYPPPLPQRPPPRLPPHQPG 281
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 32.0 bits (71), Expect = 0.61
Identities = 65/242 (26%), Positives = 90/242 (37%), Gaps = 41/242 (16%)
Query: 10 RTKGSWEMLPSGWAMGHPSCSPRTPVPP----MSSIPGSSGCLG------VPFSAPEGCV 59
RT W L S P S P PP +S +P + G P++AP
Sbjct: 652 RTLSHWSALLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVP 711
Query: 60 PRPHAGLQATC--PWISPSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMWLKVAPCK 117
P P A A P +SP P +L L+ P PR + + A G + +
Sbjct: 712 PAPQASWWAFVEPPAVSPEVPPDL---LAFPGPRPSFRGSRRRGAAFGFPGASPRASR-- 766
Query: 118 CKASGSPTFILGKGIRLQVPQLPSSCLWCSRKPGMCTALSPAVGSWS-RGIPVEGVLLSP 176
+ + SP L PQ PS L S G C+ L+P S R P + L P
Sbjct: 767 -RRAWSP---------LASPQ-PS--LRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPP 813
Query: 177 C--------AHSLRGSRGWAHPQQHPLAGTRAPSARGAGCSHTHTHAQLS-PCGL-GLWR 226
+ + R + G P PL G+ P + G H+ + L+ P L WR
Sbjct: 814 ARRPRSLQESPAPRRAAGRLGPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLPHTWR 873
Query: 227 RL 228
RL
Sbjct: 874 RL 875
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 32.0 bits (71), Expect = 0.61
Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 20/129 (15%)
Query: 27 PSC-SP----RTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISPSPPTEL 81
PSC SP R+PVPP P VP S P P+P P P P
Sbjct: 389 PSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPSCP---APQPR-------PPPPPPPGERT 438
Query: 82 LQDLSNPPPRSHKQQQGKLDQALEGLGMWLKVAPCKCKASGSPTFILGKGIRLQVPQLPS 141
L + + P SH + G +G + ++A A SP ++ + L P+
Sbjct: 439 LAERAYAKPPSHHVKAG-----FQGRRSYSELAEGAAYAGASPPWLQAEAATLPKPRAYG 493
Query: 142 SCLWCSRKP 150
S L+ +P
Sbjct: 494 SELYGPGRP 502
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 32.0 bits (71), Expect = 0.61
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 31/127 (24%)
Query: 30 SPRTPVPPMSSIPGSSG-----CLGVP---FSAPEGCV-------PRPHAGLQATCPWIS 74
+PR P+PP + P LG P A G V P P G P +
Sbjct: 1470 APREPLPPPAPEPSPHSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLG-----PTVP 1524
Query: 75 PSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMWLKV------APCKCKASGSPTFIL 128
P PP+ L D PPPR G +D ++ L L+ P ++G+P +
Sbjct: 1525 PQPPSALESDGEGPPPR-----VGFVDSTIKSLDEKLRTLLYQEHVPTSSASAGTPVEVG 1579
Query: 129 GKGIRLQ 135
+ L+
Sbjct: 1580 DRDFTLE 1586
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 32.0 bits (71), Expect = 0.61
Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 33/211 (15%)
Query: 23 AMGHPSCSPRTPVPPMSSIPGSSGCL-----GVPFSAPEGCVPRPHAGLQATCPWISPSP 77
++G PS +P+ P P + C G F GC+PR + S +
Sbjct: 933 SLGPPSRTPKLPPTAGPRAPLNIECFVQTPEGSCFPKKPGCLPRSEEAVVTA----SRNH 988
Query: 78 PTELLQDLSN-------PPPRSHKQQQG----KLDQALEGLGMWLKVAPCKC----KASG 122
+L LS PP +Q G + Q+ + + +P +C + G
Sbjct: 989 EQTVLGPLSGNLMLPAQPPHEGSVEQVGGERCRGPQSSGPVEAKQEDSPFQCPKEERPGG 1048
Query: 123 SPTFILG----KGIRLQVPQLPS---SCLWCSRKPGMCTALSPAVGSWSRGIPVEGVLLS 175
P G G+ +VP +PS + L S K G C+ + GS + +P E +L
Sbjct: 1049 VPCMDQGGCPLAGLSQEVPTMPSLPGTGLTASPKAGPCSTPTSQHGSTATFLPSEDQVLM 1108
Query: 176 PCAHSLRGSRGWAHPQQHPLAGTRAPSARGA 206
A +L G Q HP T A S+ GA
Sbjct: 1109 SSAPTLHLGLG-TPTQSHP-PETMATSSEGA 1137
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 32.0 bits (71), Expect = 0.61
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 27 PSCSPRTPV---PP--MSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISP--SPPT 79
P+ P +P PP + S PG + G P G V P + +++CP + P+
Sbjct: 152 PALEPESPAALGPPGYLHSAPGPAPAPGE--GPPPGTVLEPQSAPESSCPCRGSVKNQPS 209
Query: 80 ELLQDLSNPPPRSHKQQQGKLDQAL 104
E L D++ PPR +Q +D L
Sbjct: 210 EELPDMTTFPPRLLAEQLTLMDAEL 234
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 31.6 bits (70), Expect = 0.80
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 10 RTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQAT 69
R G W GW G + + P+P + PG+ GC S G VPR + L A
Sbjct: 522 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGC-----SLSRGPVPRQGSLLSAR 576
Query: 70 CPW 72
W
Sbjct: 577 VGW 579
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 31.6 bits (70), Expect = 0.80
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 10 RTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQAT 69
R G W GW G + + P+P + PG+ GC S G VPR + L A
Sbjct: 522 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGC-----SLSRGPVPRQGSLLSAR 576
Query: 70 CPW 72
W
Sbjct: 577 VGW 579
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 31.6 bits (70), Expect = 0.80
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 10 RTKGSWEMLPSGWAMGHPSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQAT 69
R G W GW G + + P+P + PG+ GC S G VPR + L A
Sbjct: 530 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGC-----SLSRGPVPRQGSLLSAR 584
Query: 70 CPW 72
W
Sbjct: 585 VGW 587
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 31.6 bits (70), Expect = 0.80
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
Query: 19 PSGWAMGHPSCSPRT--PVPPMSSIP---------GSSGCLGVPFSAPEGCVPRPHAGLQ 67
P W P +PR+ P+P S P +S + F PE +P ++
Sbjct: 299 PEAWGTDTPPATPRSSWPMPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKVE 358
Query: 68 ATCPWISPSPPTELLQDLSNP--PPRSHKQQQGKLDQAL 104
A +P+P L ++ P P +H++ Q L Q L
Sbjct: 359 APSSSPAPAPSPVLQREAPTPSSEPDTHQKAQTALQQHL 397
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 31.6 bits (70), Expect = 0.80
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 31 PRTPVPPMSSIPGSSGCLGVPFSAPEGCVP-RPHAGLQATCPWISPSPPT 79
PR P P + PG+ G + P A GC P RPH A C + P PT
Sbjct: 53 PRRPAPLPARPPGALGSVLRPLRARPGCRPRRPHPA--ARCLPLRPHRPT 100
>gi|77917617 hypothetical protein LOC54463 isoform 1 [Homo sapiens]
Length = 497
Score = 31.6 bits (70), Expect = 0.80
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 51 PFSAPEGCVPRPHAGLQATCPWISPSPPTELLQDLSNPPPRSHKQQQGKLDQALEGLGMW 110
P A EGC P P A QA PSPP ++P R ++++ + A EG G
Sbjct: 7 PEHAEEGC-PAPAAEEQAP-----PSPPPPQ----ASPAERQQQEEEAQEAGAAEGAG-- 54
Query: 111 LKVAPCKCKASGSPTFILGKGI 132
L+V +A+ + T++LG+ +
Sbjct: 55 LQVEEAAGRAAAAVTWLLGEPV 76
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 31.2 bits (69), Expect = 1.0
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 16 EMLPSGWAMGHPSCSP-RTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWIS 74
++ P+ W+ G P +P + VPP SS+P +G V P P AG T +
Sbjct: 798 KVAPATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSV--GQPGAGFGMPPAG---TGMPMM 852
Query: 75 PSPPTELLQDLSNPP 89
P P Q + PP
Sbjct: 853 PQQPVMFAQPMMRPP 867
>gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
sapiens]
Length = 210
Score = 31.2 bits (69), Expect = 1.0
Identities = 44/162 (27%), Positives = 59/162 (36%), Gaps = 24/162 (14%)
Query: 20 SGWAMGH----PSCSPRTPVPPMSSIPGSSGCLGVPFSAPEGCVPRPHAGLQATCPWISP 75
S W H PS SP + VPP PGS + P +P+ VP P + P SP
Sbjct: 55 SSWPSTHSVVLPSRSPDSVVPP----PGSPDSVVPPPRSPDSVVPPPGSPDSVVLPPRSP 110
Query: 76 S---PPTELLQDLSNPP--PRSHKQQQGKLDQALEGLGMWLKVAPCKCKASGSPTFILGK 130
PP + PP P S D P +A G+P + G+
Sbjct: 111 DSVVPPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSPRSLAPPAAARAEGAPGW-AGR 169
Query: 131 GIRLQV----PQLPSSCLWCSRKPGMCTALSPAVGSWSRGIP 168
R+ + PQ+P SR P + LS V + P
Sbjct: 170 WGRVPLARSPPQVP------SRPPSLSQPLSSRVSLYELLFP 205
>gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo
sapiens]
Length = 167
Score = 31.2 bits (69), Expect = 1.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 3 QSLLGCQRTKGSWEMLPSGWAMGHPS---CSPRTPVPPMSSIPG 43
+SL+ C+ TKG W + S + S C+P P+ P S+ G
Sbjct: 98 RSLIPCRSTKGRWPLTASAAGLSRLSQILCTPGAPLGPPGSLRG 141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.480
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,546,792
Number of Sequences: 37866
Number of extensions: 957413
Number of successful extensions: 3460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 3316
Number of HSP's gapped (non-prelim): 264
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.