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Search of human proteins with 239751445
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751445 PREDICTED: similar to CD300C antigen [Homo
sapiens]
(259 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 539 e-154
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 442 e-124
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 442 e-124
gi|5729776 CD300C antigen [Homo sapiens] 154 6e-38
gi|31324530 CD300e molecule [Homo sapiens] 151 6e-37
gi|56550061 leukocyte membrane antigen [Homo sapiens] 114 6e-26
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 103 1e-22
gi|169646348 CD300 molecule-like family member d [Homo sapiens] 99 3e-21
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 83 3e-16
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 63 2e-10
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 55 6e-08
gi|30794266 triggering receptor expressed on myeloid cells-like ... 50 3e-06
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 49 3e-06
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 49 4e-06
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 49 6e-06
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 49 6e-06
gi|37700254 triggering receptor expressed on myeloid cells-like ... 46 4e-05
gi|170932501 triggering receptor expressed on myeloid cells-like... 43 3e-04
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 42 7e-04
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 37 0.022
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 37 0.022
gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens] 36 0.029
gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens] 36 0.029
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom... 35 0.050
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 34 0.11
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 34 0.11
gi|45505167 immunoglobulin superfamily, member 1 isoform 1 [Homo... 33 0.32
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens] 32 0.42
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens] 32 0.42
gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Ho... 32 0.55
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 539 bits (1389), Expect = e-154
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLGWPQGCYLMGPQKASGNTGRAEDLTLKV 60
MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLGWPQGCYLMGPQKASGNTGRAEDLTLKV
Sbjct: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLGWPQGCYLMGPQKASGNTGRAEDLTLKV 60
Query: 61 PLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCL 120
PLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCL
Sbjct: 61 PLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCL 120
Query: 121 PIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGL 180
PIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGL
Sbjct: 121 PIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGL 180
Query: 181 SGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSSTCFLLLPLLKVPLLLS 240
SGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSSTCFLLLPLLKVPLLLS
Sbjct: 181 SGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSSTCFLLLPLLKVPLLLS 240
Query: 241 ILGAILWVNRPWRTPWTES 259
ILGAILWVNRPWRTPWTES
Sbjct: 241 ILGAILWVNRPWRTPWTES 259
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 442 bits (1138), Expect = e-124
Identities = 213/215 (99%), Positives = 214/215 (99%)
Query: 45 KASGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE 104
+ SGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE
Sbjct: 114 RPSGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE 173
Query: 105 EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA 164
EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA
Sbjct: 174 EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA 233
Query: 165 GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS 224
GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS
Sbjct: 234 GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS 293
Query: 225 TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES 259
TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES
Sbjct: 294 TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES 328
Score = 70.9 bits (172), Expect = 1e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Query: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLGW 34
MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGL W
Sbjct: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLLW 34
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 442 bits (1138), Expect = e-124
Identities = 213/215 (99%), Positives = 214/215 (99%)
Query: 45 KASGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE 104
+ SGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE
Sbjct: 114 RPSGNTGRAEDLTLKVPLVQTLPGEDGETDLCFPGCLTVSGPSTVMGAVGESLSVQCRYE 173
Query: 105 EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA 164
EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA
Sbjct: 174 EKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDA 233
Query: 165 GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS 224
GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS
Sbjct: 234 GKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSS 293
Query: 225 TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES 259
TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES
Sbjct: 294 TCFLLLPLLKVPLLLSILGAILWVNRPWRTPWTES 328
Score = 70.9 bits (172), Expect = 1e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Query: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLGW 34
MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGL W
Sbjct: 1 MTQRAGAAMLPSALLLLCVPDEQGRSWVQGGLLW 34
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 154 bits (390), Expect = 6e-38
Identities = 94/201 (46%), Positives = 123/201 (61%), Gaps = 27/201 (13%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 134
L PG +S P TV G VG SLSVQCRYE++++T NK+WCR P + ++VET GS G
Sbjct: 17 LLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQILRCDKIVETKGSAG 76
Query: 135 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
R+ +V I D P +L+FTVTLENLT +DAG Y CG+ T D DP +V+V
Sbjct: 77 -KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD-----FHDPIVEVEVS 130
Query: 195 V-----SSASSTENSVKTPASPTR----------------PSQCQGSLPSSTCFLLLPLL 233
V ++ASS ++S+ T PT+ PS GSL S+ FLLL LL
Sbjct: 131 VFPAGTTTASSPQSSMGTSGPPTKLPVHTWPSVTRKDSPEPSPHPGSLFSNVRFLLLVLL 190
Query: 234 KVPLLLSILGAILWVNRPWRT 254
++PLLLS+LGA+LWVNRP R+
Sbjct: 191 ELPLLLSMLGAVLWVNRPQRS 211
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 151 bits (381), Expect = 6e-37
Identities = 90/197 (45%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 134
LC GCL+++GP +V G G+SL+V C+YE YK +NKYWCR +VET G E
Sbjct: 10 LCLSGCLSLTGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCESIVETKGEEK 69
Query: 135 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
V R+ +V I DHP L FTVT++NL DDAG Y C I T+ D S DP V+V
Sbjct: 70 VERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTVWVLDSWS---RDPSDLVRVY 126
Query: 195 VSSASSTENSVKTPASP-----TRP----------SQCQGSLPSSTCFLLLPLLKVPLLL 239
VS A +T PA+P P +Q G SS FLL+ LLK+PLLL
Sbjct: 127 VSPAITTPRRTTHPATPPIFLVVNPGRNLSTGEVLTQNSGFRLSSPHFLLVVLLKLPLLL 186
Query: 240 SILGAILWVNRP-WRTP 255
S+LGA+ WVNRP W P
Sbjct: 187 SMLGAVFWVNRPQWAPP 203
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 114 bits (286), Expect = 6e-26
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 29/191 (15%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 134
L PGC +S TV G VG SLSVQC YE++++T NKYWCR P + + ++VET GS G
Sbjct: 10 LWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAG 69
Query: 135 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
R+ +V I D P +L+FTVTLENLT +DAG Y CG+ T D DP +V+V
Sbjct: 70 -KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD-----FHDPVVEVEVS 123
Query: 195 VSSASSTENSVKTPASPT--RPSQCQGSLP---SSTCFLL--------------LPLLKV 235
V AS++ TPAS T + S + P S+T F + + ++
Sbjct: 124 VFPASTS----MTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQL 179
Query: 236 PLLLSILGAIL 246
PLLLS+L +L
Sbjct: 180 PLLLSLLALLL 190
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 103 bits (257), Expect = 1e-22
Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 134
L GC ++ GP +V SL+VQC Y++ ++T+ K+WCR ++ET GSE
Sbjct: 47 LSLSGCFSIQGPESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDTCKILIETRGSEQ 106
Query: 135 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
+SD+V I D+ D TFTVT+E L DDA Y CGI + G PD QV+V+
Sbjct: 107 GEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGI----ERRG-----PDLGTQVKVI 157
Query: 195 V--SSASSTENSVKTPASPTRPSQCQ--GSLPSSTCFLLLPLLKVPLLLSILGAILWVNR 250
V A+ST T +SPT + GS ++LL +KVP+LL ++ AILW+
Sbjct: 158 VDPEGAAST-----TASSPTNSNMAVFIGS-HKRNHYMLLVFVKVPILLILVTAILWLKG 211
Query: 251 PWRTP 255
R P
Sbjct: 212 SQRVP 216
>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
Length = 194
Score = 99.4 bits (246), Expect = 3e-21
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Query: 83 VSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVI 142
++GP+TV G+ SL+VQC Y ++T+ K+ C+ + +V+T GSE V+ ++V
Sbjct: 21 ITGPTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNYCNILVKTNGSEQEVKKNRVS 80
Query: 143 ITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLP-DPFFQVQVLVSSASST 201
I D+ + FTVT+ENL DDA Y CG + G+ + +P Q V + ++
Sbjct: 81 IRDNQKNHVFTVTMENLKRDDADSYWCGTERPGIDLGVKVQVTINPGTQTAVSEWTTTTA 140
Query: 202 ENSVKTPASPTRPSQCQGSLPSSTCFLLLPLLKVPLLLSILGAILWVNRPWR 253
+ A+ S S ST FL L LL++PLLLS+LG +LWVNRP R
Sbjct: 141 SLAFTAAATQKTSSPLTRSPLKSTHFLFLFLLELPLLLSMLGTVLWVNRPQR 192
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 82.8 bits (203), Expect = 3e-16
Identities = 60/168 (35%), Positives = 88/168 (52%), Gaps = 18/168 (10%)
Query: 83 VSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHE---MVETGGSEGVVRSD 139
++GP+TV G SL+VQC Y ++T+ K+WCR IW + +V+T GSE V+ D
Sbjct: 22 ITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGA---IWRDCKILVKTSGSEQEVKRD 78
Query: 140 QVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSAS 199
+V I D+ + TFTVT+E+L DA Y CGI + G++ VQV + A
Sbjct: 79 RVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVT---------VQVTIDPAP 129
Query: 200 STENSVKTPASPTRPS-QCQGSLPSSTCFLLLPLLKVPLLLSILGAIL 246
T+ +T +SPT +LLPL+ LLL ++ A L
Sbjct: 130 VTQE--ETSSSPTLTGHHLDNRHKLLKLSVLLPLIFTILLLLLVAASL 175
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWH----EMVETG 130
L PG + GP + G G+++S+QC Y E+ + KYWCR+ + E
Sbjct: 11 LLLPGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSGTIYAEEE 70
Query: 131 GSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGI 171
G E +V I D +L+ VTL NLT DAG+Y CG+
Sbjct: 71 GQE--TMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGV 109
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 55.1 bits (131), Expect = 6e-08
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 77 FPGCLTVS---GPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQPCLPIWHEMVETGG 131
FP T S GP V G S+S+ C Y + KYWCRQ ++ + G
Sbjct: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEG 72
Query: 132 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 191
+ + +T+ P + TF V + L+ DD+G+Y+CG+ + GLS F V
Sbjct: 73 YVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLG--INSRGLS-------FDV 123
Query: 192 QVLVSSASSTENSVK 206
+ VS N K
Sbjct: 124 SLEVSQGPGLLNDTK 138
Score = 52.0 bits (123), Expect = 5e-07
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETG------GSEGVVRSD 139
P+ V G G S++V C Y K KYWC +W E + G SEG V++
Sbjct: 356 PTVVKGVAGGSVAVLCPYNRKESKSIKYWC------LW-EGAQNGRCPLLVDSEGWVKAQ 408
Query: 140 ---QVIITDHPGDLTFTVTLENLTADDAGKYRC 169
++ + + PG+ TFTV L LT+ DAG Y C
Sbjct: 409 YEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWC 441
Score = 42.4 bits (98), Expect = 4e-04
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQ-----PCLPIWHEMVETGGSEGVVRSDQ 140
P V +GE+L V C + K+ ++ KYWC+ LP E G S+ V D+
Sbjct: 467 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDE----GPSKAFVNCDE 522
Query: 141 VIITDHPGDLTFTVTLENLTADDAGKYRCGI 171
++TL +T D G Y CG+
Sbjct: 523 -------NSRLVSLTLNLVTRADEGWYWCGV 546
Score = 37.0 bits (84), Expect = 0.017
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITD 145
P V + S++ C + K+ CRQ +V T G ++++
Sbjct: 242 PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP 301
Query: 146 HPGDLTFTVTLENLTADDAGKYRCG 170
D +F+V + L +DAG+Y CG
Sbjct: 302 QDKDGSFSVVITGLRKEDAGRYLCG 326
Score = 28.5 bits (62), Expect = 6.1
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 78 PGCLTVSGPSTVMGAVGESLSVQCRYE----EKYKTFNKYWCRQPCLPIWHEMVETGGSE 133
PG L + TV +G ++++ C ++ +K K+ K P L I
Sbjct: 131 PGLLNDTKVYTV--DLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYT 188
Query: 134 GVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRC 169
G +R D G L F+V + L DAG+Y C
Sbjct: 189 GRIRLD----IQGTGQLLFSVVINQLRLSDAGQYLC 220
>gi|30794266 triggering receptor expressed on myeloid cells-like 1
[Homo sapiens]
Length = 311
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 86 PSTVMGAVGESLSVQCRYEEKYKTFNKYWCR---QPCLPIWHEMVETGGSEGVVRSDQVI 142
P + VG S+ VQC Y + K WCR + C P+ V+ G +
Sbjct: 23 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAG----RRTF 78
Query: 143 ITDHPGDLTFTVTLENLTADDAGKYRCGI-----ATILQEDGLSGFLPDPFFQVQVLVSS 197
+TD G L V + L +DAG+Y C + IL L+ P+ + + S
Sbjct: 79 LTDLGGGL-LQVEMVTLQEEDAGEYGCMVDGARGPQILHRVSLNILPPEEEEETHKIGSL 137
Query: 198 ASSTENSVKTPASPTRPSQCQGSLP 222
A + + A+P PSQ + S+P
Sbjct: 138 AENAFSDPAGSANPLEPSQDEKSIP 162
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 49.3 bits (116), Expect = 3e-06
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 82 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 138
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 83 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 142
Query: 139 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSA 198
D+V +TD P F V L L+ DD G Y CGI + E+ + F + + +S+
Sbjct: 143 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS---ENNML------FLSMNLTISAG 193
Query: 199 SSTENSVKTPAS 210
++ TPA+
Sbjct: 194 PASTLPTATPAA 205
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 48.9 bits (115), Expect = 4e-06
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKY-WCRQPCLPIWHEMVETGGSE 133
L FPG S + G++L+V+C+Y + K WC++ + +V +
Sbjct: 14 LLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPR 73
Query: 134 GVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGI 171
+ + + I D P FTVT+ +L +D+G Y C I
Sbjct: 74 TMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRI 111
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 48.5 bits (114), Expect = 6e-06
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 82 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 138
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
Query: 139 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 173
D+V +TD P F V L L+ DD G Y CGI +
Sbjct: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 48.5 bits (114), Expect = 6e-06
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 82 TVSGPSTVMGAVGESLSVQCRYEEKY--KTFNKYWCRQ-PCLPIWHEMVETGGSEGVVRS 138
++ G V G G ++++QC Y + KYWCR P I +V T
Sbjct: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYR 167
Query: 139 DQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 173
D+V +TD P F V L L+ DD G Y CGI +
Sbjct: 168 DRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS 202
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 45.8 bits (107), Expect = 4e-05
Identities = 43/165 (26%), Positives = 63/165 (38%), Gaps = 29/165 (17%)
Query: 76 CFPGCLTVSGPSTVMGAV--------GESLSVQCRYEEKYKTFN-KYWCRQPCLPIWHEM 126
CF C S P GAV G++L +QC+Y K + K WC+Q +
Sbjct: 10 CFHLCCCCSWPQ---GAVPEELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLL 66
Query: 127 VETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPD 186
V + V+ I D P F +T+ LT +D+G Y CGI
Sbjct: 67 VTSSKPWTAVQKSHYTIWDKPNAGFFNITMIQLTQNDSGFYWCGI--------------- 111
Query: 187 PFFQVQVLVSSASSTENSVKTPASPTRPSQCQGSLPSSTCFLLLP 231
+ + + + V +PA T P LP+ST + P
Sbjct: 112 --YNASENIITVLRNISLVVSPAPTTSPMWTLPWLPTSTVLITSP 154
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 79 GCLTVSGPST------VMGAVGESLSVQCRYE-EKYKTFNKYWCRQPCLPIWHEMVETGG 131
GC VSGPS V GE+LSVQC Y+ K + K WC+ I + E G
Sbjct: 15 GC--VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-----IRKKKCEPGF 67
Query: 132 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 191
+ V+ + ++ D +T+ L D+G+Y C T SG L P
Sbjct: 68 ARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNT-------SGIL-YPLMGF 119
Query: 192 QVLVSSASSTENSV 205
Q+ VS A TE ++
Sbjct: 120 QLDVSPAPQTERNI 133
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 41.6 bits (96), Expect = 7e-04
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 22/93 (23%)
Query: 91 GAVGESLSVQCRYEE-KYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQV-------- 141
G G+SL V C Y+ K+ K WCRQ + E G + VV + +
Sbjct: 26 GVAGQSLQVSCPYDSMKHWGRRKAWCRQ--------LGEKGPCQRVVSTHNLWLLSFLRR 77
Query: 142 -----IITDHPGDLTFTVTLENLTADDAGKYRC 169
ITD T T+TL NL DAG Y+C
Sbjct: 78 WNGSTAITDDTLGGTLTITLRNLQPHDAGLYQC 110
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 36.6 bits (83), Expect = 0.022
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 20 PDEQGRSWV---QGGLGWPQGCYLMGPQKASGNTGRAEDLTLK-VPLVQTLPGEDGETDL 75
P E GR QG G P GP+ A+G G+A + L P ++ LPG+DGET
Sbjct: 581 PGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGA 640
Query: 76 CFPGCLTVSGPSTVMGAVGE 95
P GP+ G GE
Sbjct: 641 AGP-----PGPAGPAGERGE 655
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 36.6 bits (83), Expect = 0.022
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 20 PDEQGRSWV---QGGLGWPQGCYLMGPQKASGNTGRAEDLTLK-VPLVQTLPGEDGETDL 75
P E GR QG G P GP+ A+G G+A + L P ++ LPG+DGET
Sbjct: 512 PGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGA 571
Query: 76 CFPGCLTVSGPSTVMGAVGE 95
P GP+ G GE
Sbjct: 572 AGP-----PGPAGPAGERGE 586
>gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens]
Length = 266
Score = 36.2 bits (82), Expect = 0.029
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 95 ESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTV 154
++ S C Y YK KYWCR + + + S ++ V + D L V
Sbjct: 87 DTASAICNYNAHYKNHPKYWCRGYFRDYCNIIAFSPNS-----TNHVALRDTGNQL--IV 139
Query: 155 TLENLTADDAGKYRCGIATILQEDGL 180
T+ LT +D G Y CGI D +
Sbjct: 140 TMSCLTKEDTGWYWCGIQRDFARDDM 165
>gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]
Length = 347
Score = 36.2 bits (82), Expect = 0.029
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 95 ESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTV 154
++ S C Y YK KYWCR + + + S ++ V + D L V
Sbjct: 168 DTASAICNYNAHYKNHPKYWCRGYFRDYCNIIAFSPNS-----TNHVALRDTGNQL--IV 220
Query: 155 TLENLTADDAGKYRCGIATILQEDGL 180
T+ LT +D G Y CGI D +
Sbjct: 221 TMSCLTKEDTGWYWCGIQRDFARDDM 246
>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
sapiens]
Length = 234
Score = 35.4 bits (80), Expect = 0.050
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 94 GESLSVQCRYE-EKYKTFNKYW--CRQPCLPIWHEMVETGGSEG-VVRSDQVIITDHPGD 149
G++L V+C Y EK+ + K W R +P E V+ ++I+ D+
Sbjct: 34 GQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDH 93
Query: 150 LTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPA 209
V + NL +D+G Y+C I +E + F +++++V+ S TP
Sbjct: 94 GLLRVRMVNLQVEDSGLYQCVIYQPPKEPHML------FDRIRLVVTKGFS-----GTPG 142
Query: 210 SPTRPSQCQGSLPSSTCFLLLPLLKVP 236
S +Q +P +T L PL P
Sbjct: 143 SNENSTQNVYKIPPTTTKALCPLYTSP 169
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 34.3 bits (77), Expect = 0.11
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 79 GCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRS 138
G L + V G +G S++++C E + Y CR EM +G VV +
Sbjct: 15 GALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCR--------EMAGSGTCGTVVST 64
Query: 139 DQVIITDHPGDLT---------FTVTLENLTADDAGKYRCG 170
I ++ G +T F V + LT D+G Y CG
Sbjct: 65 TNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 34.3 bits (77), Expect = 0.11
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 79 GCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRS 138
G L + V G +G S++++C E + Y CR EM +G VV +
Sbjct: 15 GALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCR--------EMAGSGTCGTVVST 64
Query: 139 DQVIITDHPGDLT---------FTVTLENLTADDAGKYRCG 170
I ++ G +T F V + LT D+G Y CG
Sbjct: 65 TNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
>gi|45505167 immunoglobulin superfamily, member 1 isoform 1 [Homo
sapiens]
Length = 1336
Score = 32.7 bits (73), Expect = 0.32
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Query: 114 WCRQPCLPIWHEMVETGGSEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIAT 173
WCR P + + + + G + + + D F +T N++ G+Y C
Sbjct: 990 WCRGPVHGVGYILHKEGEA-----TSMQLWGSTSNDGAFPIT--NISGTSMGRYSC---- 1038
Query: 174 ILQEDGLSGFLPDPFFQVQVLVSSASSTENSVKTPASPTRPS-----QCQGSLPSSTCFL 228
D S P +++LV+ + + P P QCQG LP ST L
Sbjct: 1039 CYHPDWTSSIKIQPSNTLELLVTGLLPKPSLLAQPGPMVAPGENMTLQCQGELPDSTFVL 1098
Query: 229 LLPLLKVPL 237
L + PL
Sbjct: 1099 LKEGAQEPL 1107
>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 32.3 bits (72), Expect = 0.42
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 22/169 (13%)
Query: 82 TVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPC--LPIWHEMVETGGSEGVVRSD 139
+V+G V G G S+++ C Y + W R C + +V T G+ R D
Sbjct: 17 SVAGSVKVGGEAGPSVTLPCHYSGAVTSM--CWNRGSCSLFTCQNGIVWTNGTHVTYRKD 74
Query: 140 QVIITDHP--GDLT---FTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
T + GDL+ ++T+EN D+G Y C + G+ D V +
Sbjct: 75 ----TRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEH-------RGWFNDMKITVSLE 123
Query: 195 VSSASSTENSVKTPASPTRPSQCQGSLPSSTC--FLLLPLLKVPLLLSI 241
+ T + T + ++P++T +P VP +SI
Sbjct: 124 IVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSI 172
>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 32.3 bits (72), Expect = 0.42
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 22/169 (13%)
Query: 82 TVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPC--LPIWHEMVETGGSEGVVRSD 139
+V+G V G G S+++ C Y + W R C + +V T G+ R D
Sbjct: 17 SVAGSVKVGGEAGPSVTLPCHYSGAVTSM--CWNRGSCSLFTCQNGIVWTNGTHVTYRKD 74
Query: 140 QVIITDHP--GDLT---FTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
T + GDL+ ++T+EN D+G Y C + G+ D V +
Sbjct: 75 ----TRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEH-------RGWFNDMKITVSLE 123
Query: 195 VSSASSTENSVKTPASPTRPSQCQGSLPSSTC--FLLLPLLKVPLLLSI 241
+ T + T + ++P++T +P VP +SI
Sbjct: 124 IVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSI 172
>gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Homo
sapiens]
Length = 602
Score = 32.0 bits (71), Expect = 0.55
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 136 VRSDQVIITDHP-GDLTFTVTLENLTADDAGKYRCGIATIL--QEDGLSGFLPDPFFQVQ 192
V D+V+ + HP G T + L + A D+G+Y C L Q+ L + P ++
Sbjct: 300 VLQDRVLSSSHPWGPRTLGLELRGVRAGDSGRYTCRAENRLGSQQQALDLSVQYPPENLR 359
Query: 193 VLVSSASST 201
V+VS A+ T
Sbjct: 360 VMVSQANRT 368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,527,510
Number of Sequences: 37866
Number of extensions: 556767
Number of successful extensions: 2199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2042
Number of HSP's gapped (non-prelim): 201
length of query: 259
length of database: 18,247,518
effective HSP length: 100
effective length of query: 159
effective length of database: 14,460,918
effective search space: 2299285962
effective search space used: 2299285962
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.