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Search of human proteins with 239751384
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo
sapiens]
(455 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo ... 922 0.0
gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo ... 922 0.0
gi|239756888 PREDICTED: hypothetical protein [Homo sapiens] 422 e-118
gi|55956910 meningioma 1 [Homo sapiens] 40 0.004
gi|7662346 ADNP homeobox 2 [Homo sapiens] 39 0.013
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 37 0.037
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 36 0.063
gi|112421108 capicua homolog [Homo sapiens] 36 0.063
gi|169175458 PREDICTED: similar to hCG2040468 [Homo sapiens] 36 0.082
gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.11
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 35 0.11
gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens] 35 0.14
gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens] 35 0.14
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 35 0.18
gi|239509062 PREDICTED: hypothetical protein [Homo sapiens] 35 0.18
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 35 0.18
gi|239754746 PREDICTED: hypothetical protein [Homo sapiens] 34 0.24
gi|239749281 PREDICTED: hypothetical protein XP_002346979 [Homo ... 34 0.24
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens] 34 0.31
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 33 0.41
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 33 0.53
gi|239754132 PREDICTED: hypothetical protein [Homo sapiens] 33 0.53
gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo ... 33 0.53
gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo ... 33 0.53
gi|9256600 protocadherin alpha subfamily C, 2 isoform 1 precurso... 33 0.53
gi|157168329 formin 1 [Homo sapiens] 33 0.70
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 33 0.70
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.70
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 33 0.70
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 33 0.70
>gi|239751384 PREDICTED: hypothetical protein XP_002347833 [Homo
sapiens]
Length = 455
Score = 922 bits (2383), Expect = 0.0
Identities = 455/455 (100%), Positives = 455/455 (100%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE 60
MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE 60
Query: 61 GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP 120
GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP
Sbjct: 61 GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP 120
Query: 121 VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE 180
VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE
Sbjct: 121 VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE 180
Query: 181 GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV 240
GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV
Sbjct: 181 GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV 240
Query: 241 LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA 300
LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA
Sbjct: 241 LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA 300
Query: 301 QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL 360
QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL
Sbjct: 301 QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL 360
Query: 361 AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA 420
AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA
Sbjct: 361 AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA 420
Query: 421 VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC
Sbjct: 421 VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
>gi|239745891 PREDICTED: hypothetical protein XP_002343610 [Homo
sapiens]
Length = 455
Score = 922 bits (2383), Expect = 0.0
Identities = 455/455 (100%), Positives = 455/455 (100%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE 60
MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAE 60
Query: 61 GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP 120
GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP
Sbjct: 61 GPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAP 120
Query: 121 VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE 180
VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE
Sbjct: 121 VLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAE 180
Query: 181 GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV 240
GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV
Sbjct: 181 GPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV 240
Query: 241 LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA 300
LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA
Sbjct: 241 LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQA 300
Query: 301 QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL 360
QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL
Sbjct: 301 QSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVL 360
Query: 361 AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA 420
AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA
Sbjct: 361 AVAAAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVA 420
Query: 421 VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC
Sbjct: 421 VDVLEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
>gi|239756888 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 422 bits (1084), Expect = e-118
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 244 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 303
LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ
Sbjct: 37 LSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQ 96
Query: 304 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 363
LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA
Sbjct: 97 LQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 156
Query: 364 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 423
AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV
Sbjct: 157 AAEAQLPTANADALQCHALLGLEGVGSLLPQPLLILEQGHHLLDLLAHVDALVLAVAVDV 216
Query: 424 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 455
LEVLECLDGVEVLAALVGHPLGARLEQVVQQC
Sbjct: 217 LEVLECLDGVEVLAALVGHPLGARLEQVVQQC 248
Score = 79.3 bits (194), Expect = 7e-15
Identities = 37/49 (75%), Positives = 38/49 (77%)
Query: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALT 49
MEPRGAPTGPPARPSAGEPVRIWFSVGLP SPAPNG + G T
Sbjct: 1 MEPRGAPTGPPARPSAGEPVRIWFSVGLPVSPAPNGLSVPLMVDHGPCT 49
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 40.0 bits (92), Expect = 0.004
Identities = 81/308 (26%), Positives = 115/308 (37%), Gaps = 29/308 (9%)
Query: 16 AGEPVRIWFSVGL-PGSPAPNGKGFRVFATWGALTNESRLTKEEAEGPRKDSGVRQARAS 74
AG P +F G PG+P P G T + + S A+G S
Sbjct: 871 AGNPGSDYFPGGTAPGAPGPGGPS----GTSSSGSKASGPPNPPAQGDGTSLSPNYTLES 926
Query: 75 LLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQ-GSAPVLGSLWWGEFRAQ 133
G P G GR V G + AP G AP + G+ +A
Sbjct: 927 TSG-NDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSP---GQQQAS 982
Query: 134 GSVVGGP-AGSTGVLPQGSEEE----SMGVRSQGWLRDRTVPEGIGD-QGSAEGPQEDPL 187
G+ VGG AG T P E+ S G ++ L D+ P+ IG G A+ P
Sbjct: 983 GAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQ--PDLIGSLDGGAKSDSSSPN 1040
Query: 188 ASVYPA-QVGRQKIHVTDGLQPQDHP-----AGWSPYLTSDPRNWDLQVWATQATFPGVL 241
+ + +V + + D+P A SP +T P+ V A +
Sbjct: 1041 VGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPP 1100
Query: 242 SKLSVPLMVDHG--PCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQ 299
L + +M + P + G GG PG L++ + +SSS P H L +L Q
Sbjct: 1101 PALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEIL---Q 1157
Query: 300 AQSQLQLQ 307
AQ QLQ Q
Sbjct: 1158 AQIQLQRQ 1165
>gi|7662346 ADNP homeobox 2 [Homo sapiens]
Length = 1131
Score = 38.5 bits (88), Expect = 0.013
Identities = 75/292 (25%), Positives = 110/292 (37%), Gaps = 34/292 (11%)
Query: 96 SPSLVSVDSGGVSEVSREAPQGSAPVLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEES 155
+P ++ S GV VSR P G P G+ G V+ G ++GVLP G +S
Sbjct: 426 TPGVLQAVSPGVLSVSRAVPSGVLPAGQMTPAGQMTPAG-VIPGQTATSGVLPTGQMVQS 484
Query: 156 MGVRSQGWLRDRTVPEGIGDQGSAEGPQEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGW 215
GV G +T P + G Q PL + QV V GL +
Sbjct: 485 -GVLPVG----QTAPSRVLPPG-----QTAPLRVISAGQV------VPSGLLSPNQTVSS 528
Query: 216 SPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVDHGPCTIGHG-GAITLPGPHLLQKA 274
S + P N + Q + P V L V V G + G LP + +
Sbjct: 529 SAVV---PVNQGVNSGVLQLSQPVVSGVLPVGQPVRPGVLQLNQTVGTNILP----VNQP 581
Query: 275 QKDSSSSTGSPAGSAHYLLVLLPAQAQ-SQLQLQVLVPWGCMASPSLP-PHGSWRGPAAA 332
+ +S + S L L+P Q + + L P S +LP P G A
Sbjct: 582 VRPGASQNTTFLTSGSILRQLIPTGKQVNGIPTYTLAP----VSVTLPVPPGGLATVAPP 637
Query: 333 AVPLPLTSEAGPAPVVGGR-GAPGAAVVLAVAAAEAQLPTANADALQCHALL 383
+P+ L AP+ G G P V+ V AA++ A++ A + +L
Sbjct: 638 QMPIQLLPSGAAAPMAGSMPGMPSPPVL--VNAAQSVFVQASSSAADTNQVL 687
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 37.0 bits (84), Expect = 0.037
Identities = 44/165 (26%), Positives = 62/165 (37%), Gaps = 17/165 (10%)
Query: 28 LPGSPAPNGKGFRVFATWG---------ALTNESRLTKEEAEGPRKDSGVRQARASLLGW 78
+PGS P+ G F G A T + T +E P G +++ + W
Sbjct: 286 IPGSDQPSSHGRPRFRETGDSEDCPPFRAGTPPQQPTAPSSEWP----GPQRSPGTGPRW 341
Query: 79 VSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAPVLGSLWWGEFRAQGSVVG 138
+ PR P R SP+ GGVS +R+ P+G P+ S GE + V
Sbjct: 342 TAPLPRPAPLPAKRPGDSPASKRPRPGGVSPEARDPPKGENPLCSSEAAGE--TGPTQVR 399
Query: 139 GPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAEGPQ 183
GP G QG E G + R P +G + PQ
Sbjct: 400 GPDALGGGRLQGKGRE--GKAPGEGVSPRPAPPRLGKPPRSRPPQ 442
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 36.2 bits (82), Expect = 0.063
Identities = 43/153 (28%), Positives = 58/153 (37%), Gaps = 22/153 (14%)
Query: 201 HVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVDHGPCTIGHG 260
H GL+P G L S P+ AT +LS+ S+P + G
Sbjct: 67 HNPGGLKPP--ATGGLSSLGSPPQQLSA---ATPHGINDILSRPSMP---------VASG 112
Query: 261 GAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSL 320
A+ P + SSS++ S A +A A A S L +P SP
Sbjct: 113 AALPSASPS--GSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPP 170
Query: 321 PPHGSWRGPAAAAV------PLPLTSEAGPAPV 347
PP G + P+AAAV P PL G P+
Sbjct: 171 PPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPI 203
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 36.2 bits (82), Expect = 0.063
Identities = 97/374 (25%), Positives = 127/374 (33%), Gaps = 83/374 (22%)
Query: 5 GAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAEGPRK 64
GAP P +RP+A + +V P S P + F T G + EA P
Sbjct: 658 GAPAAPLSRPAA----TMVTNVVRPVSSTPVPIASKPFPTSG---------RAEAS-PND 703
Query: 65 DSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAPVLGS 124
+G R +G S P G P G SLV D + S + P+LG+
Sbjct: 704 TAGARTE----MGTGSRVPG--GSPLG-----VSLVYSDKKSAAATSPAPHLVAGPLLGT 752
Query: 125 LWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIGDQGSAEGPQE 184
+ +VG P G P + + G G T G G GP
Sbjct: 753 VGKAPATVTNLLVGTP-GYGAPAPPAVQFIAQGAPGGG----TTAGSGAGAGSGPNGPV- 806
Query: 185 DPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKL 244
PL + P +G+ G+ + P LQV A PG +
Sbjct: 807 -PLGILQPGALGK-----AGGITQVQYILPTLPQ--------QLQVAPAPAPAPGTKAAA 852
Query: 245 --------SVPLMVDHGPCTIGHGGAITLPGPHL--LQ--------KAQKDSSSSTGSPA 286
S+ + G T G A T P P + LQ KAQ S P
Sbjct: 853 PSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPG 912
Query: 287 GSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAP 346
GSA LLP + VLVP +A+PS+ G G PLPL S P
Sbjct: 913 GSAQ----LLPGK--------VLVP---LAAPSMSVRGGGAGQ-----PLPLVSPPFSVP 952
Query: 347 VVGGRGAPGAAVVL 360
V G P + L
Sbjct: 953 VQNGAQPPSKIIQL 966
>gi|169175458 PREDICTED: similar to hCG2040468 [Homo sapiens]
Length = 376
Score = 35.8 bits (81), Expect = 0.082
Identities = 41/147 (27%), Positives = 50/147 (34%), Gaps = 35/147 (23%)
Query: 7 PTGPPARPSAGEPVRIWFSVGLPGSPAP----------------------NGKGFRVFAT 44
P GP + AG VR +G G PAP +G V
Sbjct: 220 PAGPEGKWPAGLQVRPSVPLGYVGGPAPLTPRSDQEGIWPLSEQVTGPCSSGAPVLVAGV 279
Query: 45 WGALTNESRLTKEEAEGPRKDSGVRQARASLLGWVSASPRLL-GFPEGRACSSPSL---- 99
G L +SR EEAE +++ G GW AS L G C PSL
Sbjct: 280 AGWLKKKSRSAMEEAEVAKEEPGPGLRLVGASGWRGASEVWLPGRGLYETCWVPSLGSSE 339
Query: 100 --------VSVDSGGVSEVSREAPQGS 118
V V+ GG+ RE GS
Sbjct: 340 GGGGGGGAVKVEPGGMRRAGREGEVGS 366
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 316 ASPSLPPHGSWR-GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLP 370
A+P++PP + + G +A A P P + GPA V G G PGAA +A+ P
Sbjct: 293 AAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG-PGAAAAAPAPGVKAESP 347
Score = 32.3 bits (72), Expect = 0.91
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLP 370
P A+ + P + GPA A P L + AGP P G PG AQ
Sbjct: 139 PVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTL 198
Query: 371 TANADALQCH------ALLGLEGVGSLLPQP 395
+A L H L G +LLP P
Sbjct: 199 NGSAALLNSHHAAAPAVSLVNNGPAALLPLP 229
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 35.4 bits (80), Expect = 0.11
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 313 GCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVV-----GGRGA--PGAAVVLAVAAA 365
G A+PS PP GS GP P P + A APV R A PG+A A A A
Sbjct: 16 GAPAAPSPPPRGSRAGPVVVVAPGPPVTTATSAPVTLVAPGEARPAWVPGSAETSAPAPA 75
Query: 366 EAQLP 370
A P
Sbjct: 76 PAPAP 80
>gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens]
Length = 575
Score = 35.0 bits (79), Expect = 0.14
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 323 HGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHAL 382
H + P+A +PLP+TS P+P A G A AV +A + T A A H
Sbjct: 397 HSAHLDPSAPPMPLPVTSPLLPSP----PAAVGGASATAVPSAASMTSTRAASASSVHVP 452
Query: 383 LGLEGVGS 390
+ G GS
Sbjct: 453 VSALGAGS 460
>gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens]
Length = 550
Score = 35.0 bits (79), Expect = 0.14
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 323 HGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHAL 382
H + P+A +PLP+TS P+P A G A AV +A + T A A H
Sbjct: 372 HSAHLDPSAPPMPLPVTSPLLPSP----PAAVGGASATAVPSAASMTSTRAASASSVHVP 427
Query: 383 LGLEGVGS 390
+ G GS
Sbjct: 428 VSALGAGS 435
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 34.7 bits (78), Expect = 0.18
Identities = 78/324 (24%), Positives = 109/324 (33%), Gaps = 69/324 (21%)
Query: 62 PRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAPV 121
P +DSG R ++ + P+ P R C PS+ S G E A Q P+
Sbjct: 17 PSQDSGDRVVKSGCGPSGATRPKTGAQPHPRGCRVPSVRSCALGAGQEQLARAAQPVGPL 76
Query: 122 LGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGIG--DQGSA 179
G AG + P+ + + W R P G+G DQ A
Sbjct: 77 -----------------GAAGRSSGKPRQPTGAAAAAATSTWSRG---PRGLGIPDQACA 116
Query: 180 EGPQEDP---LASVYPAQVGRQKIH-VTDGLQ------PQDHPAGWSPYLTSDPR----- 224
+ DP LA+ A GR H + G+Q P + +PR
Sbjct: 117 SS-RADPGASLAAASQAVCGRSAGHGLPPGVQEARTLRPDGGALRAQEAIPREPRQPPPE 175
Query: 225 ----------NWDLQVWATQATFPGVLSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKA 274
W LQ+W P + S P+ D G + G G
Sbjct: 176 PELQCRLQVVRW-LQLWQ-----PRIPSSRLAPISADPGGDAVAKWGCGPSGGTRRRSTT 229
Query: 275 QKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWG--CMASPSLPPHG-------- 324
Q ++ G PA + L +A+ + Q+ PWG +A PP
Sbjct: 230 QPHPWAAEG-PARGTPSVGSLWKRRARGR---QLNRPWGRARLALQGAPPSRGTSAATAA 285
Query: 325 -SWRGPAAAAVPLPLTSEAGPAPV 347
+ R AA AV LP AGPA V
Sbjct: 286 CTGRARAARAVSLPRACWAGPAKV 309
>gi|239509062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.18
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 268 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 327
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 328 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 387
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 388 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 436
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVC 222
Query: 437 AALVGHPL 444
A H L
Sbjct: 223 ADPTVHLL 230
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 34.7 bits (78), Expect = 0.18
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 13/120 (10%)
Query: 315 MASPSLPPHGSWRGPAAAAVPLPLTSEAGP------------APVVGGRGAPGAAVVLAV 362
+AS LPP S PA+ + PLP T P APV+ AP A LA
Sbjct: 1749 LASAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAP 1808
Query: 363 AAAEAQLPTANADALQCHALLGLEGVGSL-LPQPLLILEQGHHLLDLLAHVDALVLAVAV 421
+A A + + + A+ S P P+L + +LA +LA A+
Sbjct: 1809 VSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASASIPILASAL 1868
>gi|239754746 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 34.3 bits (77), Expect = 0.24
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 268 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 327
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 328 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 387
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 388 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 436
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVR 222
Query: 437 AALVGHPL 444
A H L
Sbjct: 223 ADPTVHLL 230
>gi|239749281 PREDICTED: hypothetical protein XP_002346979 [Homo
sapiens]
Length = 262
Score = 34.3 bits (77), Expect = 0.24
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 35/188 (18%)
Query: 268 PHLLQKAQKDSSSSTGSPAGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR 327
P LL + Q S +P+ S H +L AQ +L Q L WG +PP S
Sbjct: 67 PALLSQTQLGSFPPLRAPSLSQHPEPGVLRPDAQQRLSAQPLSEWGSCLPLPIPPSRS-- 124
Query: 328 GPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANADALQCHALLGLEG 387
P P PL S P A P AD L +G
Sbjct: 125 SPEPQPPPYPLVS-------------PNLLQASPQAPLTCSTPGLGADDLG-------DG 164
Query: 388 VGSLLPQPLLILEQGHHLLDLLAHVDALVL--------AVAVDVLEVLE---CLDGVEVL 436
G +L PL+IL + LDL A V A VL A A V V+E L+G+ V
Sbjct: 165 FGPIL-GPLVILREPVE-LDLTAEVVAGVLPEGGRDPQAAAQAVSGVIEGGLLLEGLRVR 222
Query: 437 AALVGHPL 444
A H L
Sbjct: 223 ADPTVHLL 230
>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
Length = 511
Score = 33.9 bits (76), Expect = 0.31
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 318 PSLPPHGSWRGPAAAAVPL---PLTSEAGPAPVVGGRGAPGAAVVLAVAAAEAQLPTANA 374
P PP + GPA A P L EA P+ +G AP AA A + A+ P A
Sbjct: 341 PPAPPPSAPSGPAPAPPPAFYPTLQPEAAPSTQLGEVPAPSAAPTTAPSGTPARTPGAEP 400
Query: 375 DALQC 379
+C
Sbjct: 401 PTYEC 405
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 33.5 bits (75), Expect = 0.41
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 3 PRG--APTGPPARPSAGEPVRIWFSVGLPGSPAPNGKG 38
PRG P+GPP +P G P + GLPG P P+ G
Sbjct: 70 PRGHPGPSGPPGKPGYGSP-GLQGEPGLPGPPGPSAVG 106
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 33.1 bits (74), Expect = 0.53
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPV--VGGRGAP 354
P G +P +PP G + A P+P T +AGP PV G GAP
Sbjct: 653 PTGDSGAPPVPPTGD-----SGAPPVPPTGDAGPPPVPPTGDSGAP 693
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAG--PAPVVGGRGAP 354
P G +P +PP G + A P+P T ++G P P G GAP
Sbjct: 587 PTGDSGAPPVPPTGD-----SGAPPVPPTGDSGAPPVPPTGDSGAP 627
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAG--PAPVVGGRGAP 354
P G +P +PP G + A P+P T ++G P P G GAP
Sbjct: 598 PTGDSGAPPVPPTGD-----SGAPPVPPTGDSGAPPVPPTGDSGAP 638
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAG--PAPVVGGRGAP 354
P G +P +PP G + A P+P T ++G P P G GAP
Sbjct: 609 PTGDSGAPPVPPTGD-----SGAPPVPPTGDSGAPPVPPTGDSGAP 649
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAG--PAPVVGGRGAP 354
P G +P +PP G + A P+P T ++G P P G GAP
Sbjct: 620 PTGDSGAPPVPPTGD-----SGAPPVPPTGDSGAPPVPPTGDSGAP 660
Score = 30.0 bits (66), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 311 PWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAG--PAPVVGGRGAP 354
P G +P +PP G + A P+P T ++G P P G GAP
Sbjct: 631 PTGDSGAPPVPPTGD-----SGAPPVPPTGDSGAPPVPPTGDSGAP 671
>gi|239754132 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 33.1 bits (74), Expect = 0.53
Identities = 46/164 (28%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 192 PAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVD 251
PA R KIH L P A SP PR + PG +
Sbjct: 59 PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRR--------RVGKPG-----------E 99
Query: 252 HGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGS------PAGSAHYL-----------LV 294
HG ++ G + G HL A+ SS T S PAGSA + +
Sbjct: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSM 159
Query: 295 LLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR----GPAAAAV 334
LLPA L + WG P G W GP AAA+
Sbjct: 160 LLPA-GSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAAL 202
>gi|239748617 PREDICTED: hypothetical protein XP_002346744 [Homo
sapiens]
Length = 217
Score = 33.1 bits (74), Expect = 0.53
Identities = 46/164 (28%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 192 PAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVD 251
PA R KIH L P A SP PR + PG +
Sbjct: 59 PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRR--------RVGKPG-----------E 99
Query: 252 HGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGS------PAGSAHYL-----------LV 294
HG ++ G + G HL A+ SS T S PAGSA + +
Sbjct: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSM 159
Query: 295 LLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR----GPAAAAV 334
LLPA L + WG P G W GP AAA+
Sbjct: 160 LLPA-GSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAAL 202
>gi|239742644 PREDICTED: hypothetical protein XP_002342602 [Homo
sapiens]
Length = 217
Score = 33.1 bits (74), Expect = 0.53
Identities = 46/164 (28%), Positives = 56/164 (34%), Gaps = 41/164 (25%)
Query: 192 PAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVD 251
PA R KIH L P A SP PR + PG +
Sbjct: 59 PAPPPRLKIHAGPALSPDSGQARPSPKSGRRPRR--------RVGKPG-----------E 99
Query: 252 HGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGS------PAGSAHYL-----------LV 294
HG ++ G + G HL A+ SS T S PAGSA + +
Sbjct: 100 HGAFSLVRRGLLRSCGGHLTPHARVLSSGGTASAARSGVPAGSADAVPGISRAGPGSPSM 159
Query: 295 LLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWR----GPAAAAV 334
LLPA L + WG P G W GP AAA+
Sbjct: 160 LLPA-GSLLLTAERSFTWGGRRGTEKNPPGKWTGLAPGPGAAAL 202
>gi|9256600 protocadherin alpha subfamily C, 2 isoform 1 precursor
[Homo sapiens]
Length = 1007
Score = 33.1 bits (74), Expect = 0.53
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 261 GAITLPGPHLLQKAQKDSSSSTGSPAGSAHYLLVLL--------PAQAQSQLQLQVLVPW 312
GA T PGP Q A DS + TG +A L++L P Q + +
Sbjct: 812 GAQTGPGPSGAQAAVTDSRNLTGQSGQNAGNLIILKNEAVSQNEPRQPNPDWRYSASLRA 871
Query: 313 GCMASPSLPPHGSWR-GPAAAAVPLPLTSEAGPAPVVGGRGAP-GAAV 358
G +S L G R GP P S A P P G P GA V
Sbjct: 872 GMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGV 919
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 32.7 bits (73), Expect = 0.70
Identities = 45/183 (24%), Positives = 68/183 (37%), Gaps = 34/183 (18%)
Query: 34 PNGKGFRVFATWGALTNESRLTKEEAEGP---RKDSGVRQARASLLGWVSASPRLLGFPE 90
P G RV G N+ ++ E E RK++G LL + L G +
Sbjct: 80 PQEAGSRVSPDLG---NDEKIASVETESEGSQRKEAGTSLLAQELLPLST----LKGTKD 132
Query: 91 GRACSSPSLVSVDSGGVSEVSREAPQGSAPVLGSLWWGEFRAQGSVVGGPAGSTGVLPQG 150
C +LV S S+ + P+ +GS GP +GVL +
Sbjct: 133 DVICVRGTLVHTTSDSDSDDGGQEPE----------------EGSSTNGPKSPSGVLSEP 176
Query: 151 SEEESMGVRSQGWLRDRTVPEGIGDQGSAEGPQEDPLASVYPAQVGRQKIHVTDGLQPQD 210
S+E + G R+ TV G+ AE EDP P ++ + GLQ +
Sbjct: 177 SQESK---ENPGGFRENTV---TGEMNGAELCAEDP--QRIPPEMSSKLEAGNGGLQTER 228
Query: 211 HPA 213
P+
Sbjct: 229 RPS 231
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 32.7 bits (73), Expect = 0.70
Identities = 88/389 (22%), Positives = 119/389 (30%), Gaps = 80/389 (20%)
Query: 3 PRGAPT-----GPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKE 57
P+GAP G P +P P+ I S G PG+P G+ GA E +
Sbjct: 349 PQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEA----GPTGARGPEGPQGQR 404
Query: 58 EAEGPRKDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQG 117
GP G ++ +P G S P + G PQG
Sbjct: 405 GETGPPGPVGSPGLPGAI--GTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQG 462
Query: 118 SAPVLGSLWWGEFRAQGSVVG--GPAGSTGVLPQGSEEESMGVRSQ-------GWLRDRT 168
G F+ + G GP G G + EE G R G + +R
Sbjct: 463 IRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERG 522
Query: 169 VPEGIGDQGS--------------------AEGPQEDPLASVYPAQVGRQKIHVTDGLQP 208
P G GS +G Q DP P G + + G+Q
Sbjct: 523 APGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQG 582
Query: 209 QDHPAGWSPYLTSDPRNWDLQVWATQATFPGVLSKLSVPLMVDHGPCTIGHGGAITLPGP 268
+ G D R PG + + G G++ LPGP
Sbjct: 583 PEGKLGPLGAPGEDGR-------------PGPPGSIGIR----------GQPGSMGLPGP 619
Query: 269 HLLQKAQKDSSSSTGSP--AGSAHYLLVLLPAQAQSQLQLQVLVPWGCMASPSLPPHGSW 326
K SS G P AG+A +P Q + + + P G + P L
Sbjct: 620 -------KGSSGDPGKPGEAGNAG-----VPGQRGAPGKDGEVGPSGPVGPPGLAGERGE 667
Query: 327 RGPAAAAVPLPLTSEAGPAPVVGGRGAPG 355
+GP P GP G G PG
Sbjct: 668 QGPPG---PTGFQGLPGPPGPPGEGGKPG 693
Score = 31.2 bits (69), Expect = 2.0
Identities = 54/217 (24%), Positives = 75/217 (34%), Gaps = 31/217 (14%)
Query: 7 PTGPPARPSAGEPVRIWFS---VGLPGSPAPNGK----------------GFRVFATWGA 47
PTGPP P P+ S G PG P +G+ G R F
Sbjct: 235 PTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPG 294
Query: 48 LTN-ESRLTKEEAEGPRKDSGV--RQARASLLGWVSASPRL--LGFPEGRACSSPSLVSV 102
L + + EGP+ + G + A G + A L G P R P
Sbjct: 295 LPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPG 354
Query: 103 DSGGVSEVSREAPQGSAPVLGSLWW-GEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQ 161
G + P G + GS + G +G GP G+ G P+G + +
Sbjct: 355 QRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGE--AGPTGARG--PEGPQGQRGETGPP 410
Query: 162 GWLRDRTVPEGIGDQGS--AEGPQEDPLASVYPAQVG 196
G + +P IG G+ A+GP P S P G
Sbjct: 411 GPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAG 447
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 32.7 bits (73), Expect = 0.70
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 311 PWGCMASPSLPP-------HGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAPGAAVVLAVA 363
P G P LPP HG+ GP A PLP A P GG GAPG A +A A
Sbjct: 179 PPGPPPPPGLPPSGVPAAAHGAGGGPPPAP-PLP----AAQGPGGGGAGAPGLAAAIAGA 233
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 32.7 bits (73), Expect = 0.70
Identities = 78/362 (21%), Positives = 108/362 (29%), Gaps = 69/362 (19%)
Query: 4 RGAPTGPPARPSAGEPVRIWFSVGLPGSPAPNGKGFRVFATWGALTNESRLTKEEAEGPR 63
R G P P P + G+ G P P G+G +GP+
Sbjct: 757 RPGKPGQPGLPGVQGPPGL---KGVQGEPGPPGRG--------------------VQGPQ 793
Query: 64 KDSGVRQARASLLGWVSASPRLLGFPEGRACSSPSLVSVDSGGVSEVSREAPQGSAPVLG 123
+ G P + G P R P+ + QGS V G
Sbjct: 794 GEPGA-----------PGLPGIQGLPGPRGPPGPT------------GEKGAQGSPGVKG 830
Query: 124 SLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVPEGI-GDQGSAEGP 182
+ G G+ V GP G G Q + G + P G G+ G P
Sbjct: 831 AT--GPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKG---------PRGEKGEPGECSCP 879
Query: 183 QEDPLASVYPAQVGRQKIHVTDGLQPQDHPAGWSPYLTSDPRNWDLQVWATQATFPGV-- 240
+ L ++ G + + QP P P LQ PG
Sbjct: 880 SQGDL--IFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPG 937
Query: 241 ----LSKLSVPLMVDHGPCTIGHGGAITLPGPHLLQKAQKDSSSSTGSPA--GSAHYLLV 294
L L + + C G PG +L++K +K G P A L
Sbjct: 938 LTAELGSLPIEQHLLKSICGDCVQGQRAHPG-YLVEKGEKGDQGIPGVPGLDNCAQCFLS 996
Query: 295 LLPAQAQSQLQLQVLVPWGCMASPSLPPHGSWRGPAAAAVPLPLTSEAGPAPVVGGRGAP 354
L +A+ GC+ SP LP G P + GP +G G P
Sbjct: 997 LERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFP 1056
Query: 355 GA 356
GA
Sbjct: 1057 GA 1058
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 32.7 bits (73), Expect = 0.70
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 111 SREAPQGSAPVLGSLWWGEFRAQGSVVGGPAGSTGVLPQGSEEESMGVRSQGWLRDRTVP 170
S P GS V+ ++W Q V+G P G G P GS SM G T P
Sbjct: 31 SATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAG-SPSGS---SMMPGVAGGSSALTSP 86
Query: 171 EGIGDQGSAEG 181
+ +G Q AEG
Sbjct: 87 QCLGQQAFAEG 97
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,864,016
Number of Sequences: 37866
Number of extensions: 1288947
Number of successful extensions: 4598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 4291
Number of HSP's gapped (non-prelim): 432
length of query: 455
length of database: 18,247,518
effective HSP length: 106
effective length of query: 349
effective length of database: 14,233,722
effective search space: 4967568978
effective search space used: 4967568978
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.