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Search of human proteins with 239751269
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751269 PREDICTED: hypothetical protein [Homo sapiens]
(130 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751269 PREDICTED: hypothetical protein [Homo sapiens] 282 6e-77
gi|20162566 chromosome 7 open reading frame 11 [Homo sapiens] 33 0.064
gi|239753580 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|239748080 PREDICTED: hypothetical protein [Homo sapiens] 32 0.19
gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo ... 32 0.19
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 30 0.71
gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo ... 29 0.92
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|122937233 discs, large (Drosophila) homolog-associated protei... 28 1.6
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 28 1.6
gi|18201913 forkhead box N1 [Homo sapiens] 28 1.6
gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens] 28 2.1
gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens] 28 2.1
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ... 28 2.7
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ... 28 2.7
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens] 28 2.7
gi|154689847 hypothetical protein LOC9851 [Homo sapiens] 28 2.7
gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo s... 27 3.5
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 27 3.5
gi|169177615 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|169179060 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|169181042 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens] 27 4.6
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens] 27 6.0
gi|239755230 PREDICTED: hypothetical protein [Homo sapiens] 27 6.0
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 27 6.0
gi|239749770 PREDICTED: hypothetical protein [Homo sapiens] 27 6.0
gi|239744029 PREDICTED: hypothetical protein [Homo sapiens] 27 6.0
>gi|239751269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 282 bits (721), Expect = 6e-77
Identities = 130/130 (100%), Positives = 130/130 (100%)
Query: 1 MAPSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPH 60
MAPSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPH
Sbjct: 1 MAPSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPH 60
Query: 61 VSPGRKEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGPK 120
VSPGRKEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGPK
Sbjct: 61 VSPGRKEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGPK 120
Query: 121 LLDANTLPCS 130
LLDANTLPCS
Sbjct: 121 LLDANTLPCS 130
>gi|20162566 chromosome 7 open reading frame 11 [Homo sapiens]
Length = 179
Score = 33.1 bits (74), Expect = 0.064
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 5 GSLGSGFQTQGTPASGAPLPASPRRGW 31
G GSG +GTP G P P SPR G+
Sbjct: 19 GGWGSGSSFRGTPGGGGPRPPSPRDGY 45
>gi|239753580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 31.6 bits (70), Expect = 0.19
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
+GS G + ++G PAS RRGW C + R R P T S P
Sbjct: 5 TGSKAYGEAGGRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGS---RGVRARP 58
Query: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRG 91
G G EG+ ++ VLP+L+ RG
Sbjct: 59 GEPAGAEGEVESLP--KVLPVLVVACRG 84
>gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 31.6 bits (70), Expect = 0.19
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
+GS G + ++G PAS RRGW C + R R P T S P
Sbjct: 5 TGSKAYGEAGGRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGS---RGVRARP 58
Query: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRG 91
G G EG+ ++ VLP+L+ RG
Sbjct: 59 GEPAGAEGEVESLP--KVLPVLVVACRG 84
>gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo
sapiens]
Length = 103
Score = 31.6 bits (70), Expect = 0.19
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
+GS G + ++G PAS RRGW C + R R P T S P
Sbjct: 5 TGSKAYGEAGGRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGS---RGVRARP 58
Query: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRG 91
G G EG+ ++ VLP+L+ RG
Sbjct: 59 GEPAGAEGEVESLP--KVLPVLVVACRG 84
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 29.6 bits (65), Expect = 0.71
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 55 VCPWPHVSPGRKEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDA 114
V P P +P RK G EG + V L L R P AC+ T R+ G
Sbjct: 169 VAPTPPKTPARKRGEEGTE-----RMVQALTELLRRAQAPQAPRSRACEPSTPRRSRGRP 223
Query: 115 TGR 117
GR
Sbjct: 224 PGR 226
>gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo
sapiens]
Length = 537
Score = 29.3 bits (64), Expect = 0.92
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 2 APSGSLG-SGFQTQGTPASGA----PLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVC 56
AP+ G + F+ QG GA P P RRG + G Q+++ + S +
Sbjct: 199 APTPPRGKTSFRRQGRGGGGARAISPPPTVCRRGRGRLGWGGAGGQVQDVPDTQVSSDLY 258
Query: 57 PWPHVSPGRKEGVEGKDDAPAGMAVL 82
P P++ G EG++ + AGM VL
Sbjct: 259 PSPYLLVGSPEGLQA--EQMAGMGVL 282
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/104 (33%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 17 PASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLV-CPWPHVSPGRKEGVEGKDDA 75
P +GA P+ RR G L R R H L P P G KEG E
Sbjct: 111 PRTGAQ-PSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGE----- 164
Query: 76 PAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGP 119
G +L L R R HP H AS A G AT R P
Sbjct: 165 -RGTEMLRRLRGSPRPNR-HPRSGPVPAHGVASAAAGPATLRAP 206
>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/104 (33%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 17 PASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLV-CPWPHVSPGRKEGVEGKDDA 75
P +GA P+ RR G L R R H L P P G KEG E
Sbjct: 232 PRTGAQ-PSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGE----- 285
Query: 76 PAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGP 119
G +L L R R HP H AS A G AT R P
Sbjct: 286 -RGTEMLRRLRGSPRPNR-HPRSGPVPAHGVASAAAGPATLRAP 327
>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 28.9 bits (63), Expect = 1.2
Identities = 35/104 (33%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 17 PASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLV-CPWPHVSPGRKEGVEGKDDA 75
P +GA P+ RR G L R R H L P P G KEG E
Sbjct: 232 PRTGAQ-PSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGE----- 285
Query: 76 PAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGDATGRGP 119
G +L L R R HP H AS A G AT R P
Sbjct: 286 -RGTEMLRRLRGSPRPNR-HPRSGPVPAHGVASAAAGPATLRAP 327
>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
[Homo sapiens]
Length = 979
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 3 PSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLAC 39
P G G F +G S L R G +G+CLAC
Sbjct: 279 PPGEPGGPFCLEGPDGSYRDLSFKGRSGGSEGRCLAC 315
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 28.5 bits (62), Expect = 1.6
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 6 SLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSPGR 65
S G+ F TQGTP SG+P P+ +++ + ++ + +RT P+ H G
Sbjct: 1338 SYGNQFSTQGTP-SGSPFPSQQTTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLH--SGM 1394
Query: 66 KEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPP 97
K G + +A P+ ++R PP
Sbjct: 1395 KMQKAGPPVPASHIAPAPVQPPMIRRDITFPP 1426
>gi|18201913 forkhead box N1 [Homo sapiens]
Length = 648
Score = 28.5 bits (62), Expect = 1.6
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 8 GSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSPGRKE 67
G Q G P G+P P S G+ +C + + + P RT SL P ++ E
Sbjct: 25 GDLMQAPGLP--GSPAPQSKHAGF------SCSSFVSDGPPERTPSLPPHSPRIASPGPE 76
Query: 68 GVEGKDDAPAGMAVLPLLL 86
V+G PAG P L
Sbjct: 77 QVQG--HCPAGPGPGPFRL 93
>gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]
Length = 1178
Score = 28.1 bits (61), Expect = 2.1
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 8 GSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSL--VCPWPHVSPGR 65
GSG GTP + AP+ + P + W C A +++ N H L P S
Sbjct: 212 GSGVHAAGTPENSAPVESEPSQ-WACKVCSATFLELQLLNEHLLGHLEQAKSLPPGSQSE 270
Query: 66 KEGVEGKDDAPAG 78
E + D P G
Sbjct: 271 AAAPEKEQDTPRG 283
>gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]
Length = 1507
Score = 28.1 bits (61), Expect = 2.1
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 8 GSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSL--VCPWPHVSPGR 65
GSG GTP + AP+ + P + W C A +++ N H L P S
Sbjct: 541 GSGVHAAGTPENSAPVESEPSQ-WACKVCSATFLELQLLNEHLLGHLEQAKSLPPGSQSE 599
Query: 66 KEGVEGKDDAPAG 78
E + D P G
Sbjct: 600 AAAPEKEQDTPRG 612
>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
sapiens]
Length = 528
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 3 PSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCP 57
PSG+ G G A GAP P R G A I P R Q LV P
Sbjct: 275 PSGTAGPRSPASGPDARGAPTPGRARGGGASWS--ATPTTIPGPGPPRPQLLVIP 327
>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
sapiens]
Length = 528
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 3 PSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCP 57
PSG+ G G A GAP P R G A I P R Q LV P
Sbjct: 275 PSGTAGPRSPASGPDARGAPTPGRARGGGASWS--ATPTTIPGPGPPRPQLLVIP 327
>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 528
Score = 27.7 bits (60), Expect = 2.7
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 3 PSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCP 57
PSG+ G G A GAP P R G A I P R Q LV P
Sbjct: 275 PSGTAGPRSPASGPDARGAPTPGRARGGGASWS--ATPTTIPGPGPPRPQLLVIP 327
>gi|154689847 hypothetical protein LOC9851 [Homo sapiens]
Length = 967
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 35 KCLACGNQIRERNPHRTQSLVCPWPHVSP-GRKEGVEGKDDAP 76
K C ++IR R P +Q + WP SP G + + KD P
Sbjct: 382 KVKKCFSEIRSRFPIGSQKALERWPSTSPKGERRPLTAKDTFP 424
>gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo
sapiens]
Length = 1183
Score = 27.3 bits (59), Expect = 3.5
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 94 CHPPHRDAC-----KHHTASRAGGDATGRGPKL 121
C PP R +C +HH+A GD P+L
Sbjct: 294 CQPPLRTSCLLRTNRHHSAPETTGDKNRASPRL 326
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 27.3 bits (59), Expect = 3.5
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 1 MAPSGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPH 60
+ P G+ G Q P +P P R+ K + L C R + + + L P
Sbjct: 188 LQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLP--- 244
Query: 61 VSPGRKEGVEGKD 73
GR VE D
Sbjct: 245 -GRGRDRAVEAGD 256
>gi|169177615 PREDICTED: hypothetical protein [Homo sapiens]
Length = 121
Score = 26.9 bits (58), Expect = 4.6
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 20 GAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSPGRKEGVEGKDDAPAGM 79
GAP P R G G++ RE H TQ++ P R+EG+ D G
Sbjct: 21 GAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTP-----ELRREGLRNPSDGAQGS 75
Query: 80 -AVLPLLL 86
A P+LL
Sbjct: 76 GASKPVLL 83
>gi|169179060 PREDICTED: hypothetical protein [Homo sapiens]
Length = 121
Score = 26.9 bits (58), Expect = 4.6
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 20 GAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSPGRKEGVEGKDDAPAGM 79
GAP P R G G++ RE H TQ++ P R+EG+ D G
Sbjct: 21 GAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTP-----ELRREGLRNPSDGAQGS 75
Query: 80 -AVLPLLL 86
A P+LL
Sbjct: 76 GASKPVLL 83
>gi|169181042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 121
Score = 26.9 bits (58), Expect = 4.6
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 20 GAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSPGRKEGVEGKDDAPAGM 79
GAP P R G G++ RE H TQ++ P R+EG+ D G
Sbjct: 21 GAPTRGIPERLGALGLQYRRGSRGREERNHSTQTIFTP-----ELRREGLRNPSDGAQGS 75
Query: 80 -AVLPLLL 86
A P+LL
Sbjct: 76 GASKPVLL 83
>gi|31542984 inter-alpha (globulin) inhibitor H4 [Homo sapiens]
Length = 930
Score = 26.9 bits (58), Expect = 4.6
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
Query: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
SGS + QG SPRRGW + + A G+++ R P V
Sbjct: 620 SGSTFFKYYLQGAKIPKPEASFSPRRGWNR-QAGAAGSRMNFR------------PGVLS 666
Query: 64 GRKEGVEGKDDAPAGMAVLP 83
R+ G+ G D P A P
Sbjct: 667 SRQLGLPGPPDVPDHAAYHP 686
>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
Length = 365
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 15/66 (22%)
Query: 4 SGSLGSGFQTQGTPAS---GAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPH 60
+ SL + + G PA+ +P+P S W+ CG CPWP
Sbjct: 280 ASSLSASLRPPGAPATFLRPSPIPCSSPGPWQS----LCGLG--------PPCAGCPWPT 327
Query: 61 VSPGRK 66
PGR+
Sbjct: 328 AGPGRR 333
>gi|239755230 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 26.6 bits (57), Expect = 6.0
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 26/100 (26%)
Query: 2 APSG-SLGSGFQTQGTPASGAPLPAS-----------PRRGWKKGKCLACGNQIRERN-- 47
AP G +GF++ G+ A+ P A RRGW G+C + R R
Sbjct: 19 APHGRGAPAGFRSPGSAAAYDPRSAQGMGPARSGGRRQRRGWVSGRCRSMERGYRARPGA 78
Query: 48 ----PHRTQSLVCPWP------HVSPGRKEGVEGKDDAPA 77
P + + P P H SPG GV + PA
Sbjct: 79 QKSFPVPRRRPLAPLPRSTLGTHASPG--SGVGSRPSVPA 116
>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 26.6 bits (57), Expect = 6.0
Identities = 33/110 (30%), Positives = 41/110 (37%), Gaps = 13/110 (11%)
Query: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
SG GSG Q T S + ++ RR ++ A G +R R P L+ P P
Sbjct: 60 SGGGGSGSAGQPTLGSMLAVGSAARRASERAGGRAGGTALRAREP--PPPLLPPPSPPQP 117
Query: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRGTRCHPPHRDACKHHTASRAGGD 113
G K PA LP L LL T P D R GG+
Sbjct: 118 GPK--------GPASPRPLPSPLPLLETTPFPP---DTPSRRQDRRGGGE 156
>gi|239749770 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 26.6 bits (57), Expect = 6.0
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 26/100 (26%)
Query: 2 APSG-SLGSGFQTQGTPASGAPLPAS-----------PRRGWKKGKCLACGNQIRERN-- 47
AP G +GF++ G+ A+ P A RRGW G+C + R R
Sbjct: 19 APHGRGAPAGFRSPGSAAAYDPRSAQGMGPARSGGRRQRRGWVSGRCRSMERGYRARPGA 78
Query: 48 ----PHRTQSLVCPWP------HVSPGRKEGVEGKDDAPA 77
P + + P P H SPG GV + PA
Sbjct: 79 QKSFPVPRRRPLAPLPRSTLGTHASPG--SGVGSRPSVPA 116
>gi|239744029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 124
Score = 26.6 bits (57), Expect = 6.0
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 26/100 (26%)
Query: 2 APSG-SLGSGFQTQGTPASGAPLPAS-----------PRRGWKKGKCLACGNQIRERN-- 47
AP G +GF++ G+ A+ P A RRGW G+C + R R
Sbjct: 19 APHGRGAPAGFRSPGSAAAYDPRSAQGMGPARSGGRRQRRGWVSGRCRSMERGYRARPGA 78
Query: 48 ----PHRTQSLVCPWP------HVSPGRKEGVEGKDDAPA 77
P + + P P H SPG GV + PA
Sbjct: 79 QKSFPVPRRRPLAPLPRSTLGTHASPG--SGVGSRPSVPA 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,885,308
Number of Sequences: 37866
Number of extensions: 371883
Number of successful extensions: 1316
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 45
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.