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Search of human proteins with 239751180
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo
sapiens]
(331 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo ... 673 0.0
gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo ... 563 e-160
gi|239756683 PREDICTED: hypothetical protein [Homo sapiens] 291 4e-79
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 40 0.003
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 39 0.006
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 36 0.042
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 36 0.042
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 36 0.042
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.071
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 35 0.093
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.12
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.16
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 34 0.21
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 33 0.35
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 33 0.35
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 33 0.35
gi|157694497 zinc finger and BTB domain containing 10 isoform b ... 33 0.35
gi|157694499 zinc finger and BTB domain containing 10 isoform a ... 33 0.35
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 33 0.46
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 0.78
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 32 0.78
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.78
gi|10092691 tight junction protein 3 [Homo sapiens] 32 0.78
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 32 0.78
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 32 0.78
gi|58331144 proline rich region 18 [Homo sapiens] 32 0.78
gi|150170699 kinesin family member 26A [Homo sapiens] 32 0.78
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.78
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 32 0.78
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 32 0.78
>gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo
sapiens]
Length = 331
Score = 673 bits (1736), Expect = 0.0
Identities = 331/331 (100%), Positives = 331/331 (100%)
Query: 1 MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL 60
MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL
Sbjct: 1 MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL 60
Query: 61 ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA 120
ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA
Sbjct: 61 ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA 120
Query: 121 LGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 180
LGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT
Sbjct: 121 LGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 180
Query: 181 ELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRADLNLWAW 240
ELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRADLNLWAW
Sbjct: 181 ELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRADLNLWAW 240
Query: 241 NKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGDLHGSVQA 300
NKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGDLHGSVQA
Sbjct: 241 NKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGDLHGSVQA 300
Query: 301 PDSGVDESSHDCVQDEGEDLGEEKATVGIRP 331
PDSGVDESSHDCVQDEGEDLGEEKATVGIRP
Sbjct: 301 PDSGVDESSHDCVQDEGEDLGEEKATVGIRP 331
>gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo
sapiens]
Length = 305
Score = 563 bits (1450), Expect = e-160
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 54 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 113
LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE
Sbjct: 28 LNPQALLALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSE 87
Query: 114 NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA 173
NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA
Sbjct: 88 NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGA 147
Query: 174 LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA 233
LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA
Sbjct: 148 LSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAPVADQGLGPQETRA 207
Query: 234 DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD 293
DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD
Sbjct: 208 DLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGEERADQRLQSREAAELGGGD 267
Query: 294 LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 331
LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP
Sbjct: 268 LHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 305
>gi|239756683 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 291 bits (746), Expect = 4e-79
Identities = 143/149 (95%), Positives = 144/149 (96%), Gaps = 2/149 (1%)
Query: 1 MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL 60
MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL
Sbjct: 1 MEQNRKDPPGPETTSLAPRSPLPQRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALL 60
Query: 61 ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA 120
ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA
Sbjct: 61 ALDCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALA 120
Query: 121 LGEEARGPPSPLNPLQGISQ--APQRPQA 147
LGEEARGPPSPLNPLQGISQ PQ +A
Sbjct: 121 LGEEARGPPSPLNPLQGISQGLGPQETRA 149
Score = 226 bits (577), Expect = 2e-59
Identities = 110/117 (94%), Positives = 110/117 (94%)
Query: 215 PLQLAPVADQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE 274
PL QGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE
Sbjct: 131 PLNPLQGISQGLGPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKGE 190
Query: 275 ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 331
ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP
Sbjct: 191 ERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGIRP 247
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 40.0 bits (92), Expect = 0.003
Identities = 62/230 (26%), Positives = 88/230 (38%), Gaps = 47/230 (20%)
Query: 5 RKDPPGPETTSLAPRSPLP--QRSPCHRGLVAPELLLRVECPGLEALGCSSLNPQALLAL 62
RKD P +S+ + P P +R C G V P +A G +L P + +L
Sbjct: 671 RKDTHSPLDSSVTKQVPRPPERRRACQDGSV-PRYSGSSSSTRTQASG--NLRPPSSGSL 727
Query: 63 DCFPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQ--------NEGDSEN 114
+L ++ P VH S V A +A +G R + DS +
Sbjct: 728 PS--QDLLGTSSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHTSDSCS 785
Query: 115 VSAALALGEEARGPPSPLNPL--------QG---------ISQAPQRPQAPGPRGAAEQS 157
S A +LGEEAR P P +PL QG SQ +P RG + ++
Sbjct: 786 KSGAASLGEEARDTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQPGTQPAQEAQRGPSPEA 845
Query: 158 ------------QGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGT 195
+G PC ++ R S S S+ + R PGGS GT
Sbjct: 846 SWLCGRYCPTPPRGRPCPQR---RSSSCGSTGSSHQSTARGPGGSPQEGT 892
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 38.9 bits (89), Expect = 0.006
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 97 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
A+L S NE S+ S +L G PP N QG P +PQ P P+G Q
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQG-GNQ 67
Query: 157 SQGSP 161
QG P
Sbjct: 68 PQGPP 72
Score = 33.9 bits (76), Expect = 0.21
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 105 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
G +GD+++ SA G+ PP N QG P +PQ P P+G + QG P
Sbjct: 223 GPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 278
Score = 32.3 bits (72), Expect = 0.60
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 105 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
G +GD+++ S+ G+ PP N QG P +PQ P P+G + QG P
Sbjct: 161 GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 216
Score = 30.8 bits (68), Expect = 1.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 105 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
G +G S++ S+ G+ PP N QG P +PQ P P+G + QG P
Sbjct: 285 GPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG-GNKPQGPP 340
Score = 29.3 bits (64), Expect = 5.1
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 122 GEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVS 171
G + +GPP P QG Q +PQ P P G + QG P K+R S
Sbjct: 126 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGDNKSRSS 173
Score = 29.3 bits (64), Expect = 5.1
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG + +G G+ PP N Q P +PQ P P+G Q QG P
Sbjct: 206 PQGGNKPQGPPPP-------GKPQGPPPQGDNKSQSARSPPGKPQGPPPQG-GNQPQGPP 257
Score = 28.9 bits (63), Expect = 6.6
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 15/74 (20%)
Query: 102 PSGGRQNEGDSENVSAALAL----GEEARGPPSPLNPL----QGISQA------PQRPQA 147
P GG Q +G G + +GPP P P QG S++ P +PQ
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG 306
Query: 148 PGPRGAAEQSQGSP 161
P P+G Q QG P
Sbjct: 307 PPPQG-GNQPQGPP 319
Score = 28.9 bits (63), Expect = 6.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 123 EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 159
+E P P P G Q PQ P A P+G QG
Sbjct: 372 QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQG 408
Score = 28.5 bits (62), Expect = 8.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 122 GEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVS 171
G + +GPP P QG Q +PQ P P G + QG P K+R S
Sbjct: 250 GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGGSKSRSS 297
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.042
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 125 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 180
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.042
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 125 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 180
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 36.2 bits (82), Expect = 0.042
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 125 ARGPPSPLN--PLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPSTT 180
A G P P++ P G+ + PQ+P PGP GA Q R V G+ SRP+ T
Sbjct: 53 ALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQD------RAPSAHVPGSASRPTAT 104
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.4 bits (80), Expect = 0.071
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 19/125 (15%)
Query: 104 GGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCV 163
GG Q S+A L AR PS +G +AP P P P+G Q+ P V
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSA----RGTPRAPAHPSQPKPKGL--QALRPPQV 285
Query: 164 RQEKTRVSGALSRPSTTELRGRAPGGSV--------NAGTETAKVLGEEFVILLPLLQLP 215
+ + AL S++ L +P G+ NA T L P L P
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPS-----PPLATP 340
Query: 216 LQLAP 220
L LAP
Sbjct: 341 LPLAP 345
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.0 bits (79), Expect = 0.093
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 122 GEEARGPPSPLNPLQGISQAP--QRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPST 179
G AR P PL + + Q+P +RP+A G RG ++ G R+ R A S
Sbjct: 372 GRAARRKPPPLTRGRSVEQSPPRERPRAAGRRGRMAEASG----RRGSPRARKASRSQSE 427
Query: 180 TELRGRA 186
T L GRA
Sbjct: 428 TSLLGRA 434
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 34.7 bits (78), Expect = 0.12
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G + G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 167 PQGGNQSQGPPPHP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 219
Score = 34.3 bits (77), Expect = 0.16
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 83 PQGGNQSQGPPPRP------GKPEGQPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 135
Score = 34.3 bits (77), Expect = 0.16
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 104 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 156
Score = 34.3 bits (77), Expect = 0.16
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 125 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 177
Score = 33.9 bits (76), Expect = 0.21
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 146 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG-GNQSQGPP 198
Score = 32.7 bits (73), Expect = 0.46
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 105 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
GR+ +G ++ G+ PP N QG P +P+ P P+G QSQG P
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQG-GNQSQGPP 93
Score = 31.2 bits (69), Expect = 1.3
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P+G QSQG P
Sbjct: 62 PQGGNQSQGPPPRP------GKPEGPPPQGGNQSQGPPPRPGKPEGQPPQG-GNQSQGPP 114
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.3 bits (77), Expect = 0.16
Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 104 GGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCV 163
GG Q S+A L AR PS +G +AP P P P+G Q+ P V
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSA----RGTPRAPAHPSQPKPKGL--QALRPPQV 285
Query: 164 RQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAP 220
+ + AL S++ L +P ++ + L L PL LAP
Sbjct: 286 TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP 342
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 33.9 bits (76), Expect = 0.21
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G + G+ R PP N QG P +P+ P P+G + + P
Sbjct: 83 PQGGNQSQGPPPHP------GKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPP 136
Score = 33.5 bits (75), Expect = 0.27
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ PP N QG P +P+ P P+G QSQG+P
Sbjct: 62 PQGGNQSQGPPPPP------GKPEGRPPQGGNQSQGPPPHPGKPERPPPQG-GNQSQGTP 114
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
P GG Q++G G+ R PP N P +P+ P P+G QSQG P
Sbjct: 104 PQGGNQSQGTPPPP------GKPERPPPQGGNQSHRPPPPPGKPERPPPQG-GNQSQGPP 156
Score = 30.4 bits (67), Expect = 2.3
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 97 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
A+L S +E S+ S L G+ P N Q P +PQ P P+G Q
Sbjct: 9 ALLALSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQG-GNQ 67
Query: 157 SQGSP 161
SQG P
Sbjct: 68 SQGPP 72
Score = 28.9 bits (63), Expect = 6.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 105 GRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSP 161
GR+ +G ++ G+ PP N QG P +P+ P+G QSQG P
Sbjct: 38 GRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQG-GNQSQGPP 93
Score = 28.5 bits (62), Expect = 8.7
Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 102 PSGGRQNEGDSENVSAALA-------LGEEARGPPS-PLNPLQGISQAPQRPQAPGPRGA 153
P GG Q++G + AR PP P P Q PQ P PG
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQG 205
Query: 154 AEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAP 187
+ G+P +Q + +G P GR P
Sbjct: 206 PPPAGGNP--QQPQAPPAGKPQGPPPPPQGGRPP 237
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.35
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 97 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 157 SQGSP 161
QG P
Sbjct: 68 PQGPP 72
Score = 29.3 bits (64), Expect = 5.1
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 105 GRQNEGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQS 157
G +G S++ SA G +E P P P G Q PQ P A P+G
Sbjct: 262 GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 321
Query: 158 QG 159
QG
Sbjct: 322 QG 323
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 33.1 bits (74), Expect = 0.35
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 97 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 157 SQGSP 161
QG P
Sbjct: 68 PQGPP 72
Score = 30.8 bits (68), Expect = 1.7
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 102 PSGGRQN----EGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGP 150
P GG+ +G S++ SA G +E P P P G Q PQ P A P
Sbjct: 102 PQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQP 161
Query: 151 RGAAEQSQG 159
+G QG
Sbjct: 162 QGPPRPPQG 170
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 33.1 bits (74), Expect = 0.35
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 97 AVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
A+L S NE S+ S +L G P N QG P +PQ P P+G +
Sbjct: 9 ALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQG-GNK 67
Query: 157 SQGSP 161
QG P
Sbjct: 68 PQGPP 72
Score = 29.3 bits (64), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 102 PSGGRQNEGDSE--NVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 159
P GG + +G G+++R P SP QG +PQ P P+G + QG
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQG-GNKPQG 120
Query: 160 SP 161
P
Sbjct: 121 PP 122
Score = 29.3 bits (64), Expect = 5.1
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 105 GRQNEGDSENVSAALALG-------EEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQS 157
G +G S++ SA G +E P P P G Q PQ P A P+G
Sbjct: 129 GPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 188
Query: 158 QG 159
QG
Sbjct: 189 QG 190
>gi|157694497 zinc finger and BTB domain containing 10 isoform b
[Homo sapiens]
Length = 847
Score = 33.1 bits (74), Expect = 0.35
Identities = 59/236 (25%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 99 LKFPSGG--RQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
L F GG + G S N +A GE + PP P P Q AP Q P RGA E+
Sbjct: 11 LAFRGGGLVTASGGGSTNNNAG---GEASAWPPQP-QPRQPPPPAPPALQPPNGRGADEE 66
Query: 157 SQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPL 216
+ Q+ +G + + P +AG T+ G +L + L
Sbjct: 67 VELEGLEPQDLEASAGPAAGAAEEAKELLLP---QDAGGPTSLGGGAGGPLLAERNRRTL 123
Query: 217 QLAPVADQGL---GPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKG 273
GL G R + ++W F G E +LE + L+Q G
Sbjct: 124 AFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPATVDLELDALE------GKELMQDG 177
Query: 274 EERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGI 329
+D E A LG G SG + S + G D G+E G+
Sbjct: 178 ASLSDSTEDEEEGASLGDG----------SGAEGGSCSSSRRSGGDGGDEVEGSGV 223
>gi|157694499 zinc finger and BTB domain containing 10 isoform a
[Homo sapiens]
Length = 871
Score = 33.1 bits (74), Expect = 0.35
Identities = 59/236 (25%), Positives = 83/236 (35%), Gaps = 28/236 (11%)
Query: 99 LKFPSGG--RQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQ 156
L F GG + G S N +A GE + PP P P Q AP Q P RGA E+
Sbjct: 11 LAFRGGGLVTASGGGSTNNNAG---GEASAWPPQP-QPRQPPPPAPPALQPPNGRGADEE 66
Query: 157 SQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPL 216
+ Q+ +G + + P +AG T+ G +L + L
Sbjct: 67 VELEGLEPQDLEASAGPAAGAAEEAKELLLP---QDAGGPTSLGGGAGGPLLAERNRRTL 123
Query: 217 QLAPVADQGL---GPQETRADLNLWAWNKFLVPGEEIWPSERVSLERTHHGQKQRLLQKG 273
GL G R + ++W F G E +LE + L+Q G
Sbjct: 124 AFRGGGGGGLGNNGSSRGRPETSVWPLRHFNGRGPATVDLELDALE------GKELMQDG 177
Query: 274 EERADQRLQSREAAELGGGDLHGSVQAPDSGVDESSHDCVQDEGEDLGEEKATVGI 329
+D E A LG G SG + S + G D G+E G+
Sbjct: 178 ASLSDSTEDEEEGASLGDG----------SGAEGGSCSSSRRSGGDGGDEVEGSGV 223
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 32.7 bits (73), Expect = 0.46
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 17/85 (20%)
Query: 122 GEEARGPPSPLNPLQ----------GISQAPQRPQA-----PGPRGAAEQSQGSPCVRQE 166
G+EARG SP + Q G + P P A PGP G+ S G+P
Sbjct: 462 GDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPL 521
Query: 167 KTRVSGALSRPSTTELRGRAPGGSV 191
T + P TT +PGG V
Sbjct: 522 HTPRASPTGTPGTTP--PPSPGGGV 544
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 32.0 bits (71), Expect = 0.78
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 92 RGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQ--GISQAPQR-PQAP 148
RG ++ G R++E +A +EA G +P NP + G P R PQA
Sbjct: 1089 RGEKRKEVELTQGPREDEPQKPRKAAR----QEAGGDGAPANPEEPGGSRPGPGRSPQAR 1144
Query: 149 GP-----RGAAEQSQGSPCVRQEKTRVSGALSRPSTTE 181
GP GAA + G C + L P+ TE
Sbjct: 1145 GPSRSLETGAAAREGGPKCADRPSVAPKDPLQVPTNTE 1182
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 32.0 bits (71), Expect = 0.78
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 121 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 161
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 32.0 bits (71), Expect = 0.78
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 120 ALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQGSPCVRQEKTRVSGALSRPST 179
+L E +G P L+P + AP P P QGSPC QE+ R A + P+
Sbjct: 1143 SLASELKGSPVLLDPEE---LAPVTPMEVYPECKQTAGQGSPCEEQEEPRAPVAPTPPTL 1199
Query: 180 TELRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLP 215
+ +++ G +A G E PLL P
Sbjct: 1200 IKSDIVNEISNLSQGDASASFPGSE-----PLLGSP 1230
>gi|10092691 tight junction protein 3 [Homo sapiens]
Length = 952
Score = 32.0 bits (71), Expect = 0.78
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 108 NEGDSENVSAALALGEEARGPPSPLNPLQG-ISQAPQRPQAPGPRGAAEQSQG------- 159
++ DS + + + +E PP+ ++ L +SQAP P PR A +
Sbjct: 303 SDSDSSPLEEGVTMADEMSSPPADISDLASELSQAPPSHIPPPPRHAQRSPEASQTDSPV 362
Query: 160 -SPCVRQEKTRVSGALSRPSTTELRGRAP 187
SP +R+E + S +S P E R P
Sbjct: 363 ESPRLRRESSVDSRTISEPD--EQRSELP 389
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 32.0 bits (71), Expect = 0.78
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 121 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 161
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 32.0 bits (71), Expect = 0.78
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 121 LGEEARGPPSPLNP--LQGISQAPQRPQAPGPRGAAEQSQGSP 161
+G GPP P+ +QG++ P +P PGP+G Q+ P
Sbjct: 620 MGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQP 662
>gi|58331144 proline rich region 18 [Homo sapiens]
Length = 295
Score = 32.0 bits (71), Expect = 0.78
Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 43 CPGLEALGCSSLNPQALLALDC--FPPSILFLNACFFPPFVHLHKSSCVYVRGALAAVLK 100
CP A C +L P+A+L + +L FP S R LA L
Sbjct: 128 CPDSAARFCLNLTPEAVLVIQKRHLEKQLLARPRRPFP-------SPSAEPRRLLAPCLP 180
Query: 101 FPSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPG 149
+ G + G + + A G+ R PP L G Q PQ PG
Sbjct: 181 ARAAGPRRGGPASDPDAPPTAGQGRRAPPPGAQLLHGGLQVPQLSPRPG 229
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 32.0 bits (71), Expect = 0.78
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 113 ENVSAALALGEEARGPPSPLNPLQGIS-QAPQRPQAPGPRGAAEQSQGSPC--------- 162
E ++ + + G EA G P P G+ +P AP R A ++ G+P
Sbjct: 1442 EGLAHSSSKGREAPGRPPRAVPKLGVPPSSPTHGPAPACRSGAAKAVGAPKPPVGGGKGR 1501
Query: 163 -VRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTETAKVLG 202
+ +R G + ST + GR+PGG V AG A G
Sbjct: 1502 GLVAGGSRALGPSVKLSTASVTGRSPGGPV-AGPRAAPRAG 1541
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.0 bits (71), Expect = 0.78
Identities = 51/169 (30%), Positives = 64/169 (37%), Gaps = 29/169 (17%)
Query: 67 PSILFLNACFFPPFVHLHKSSCVYVRGALAAVLKFPSGGRQNEGDSENVSAALALGEEAR 126
P+ A F P V +S + ALA GG Q EG+ E L+L E
Sbjct: 667 PAAFTSEATHFKPIVLAQNASVARDQPALAQEESEERGG-QREGEGEE---KLSL-EAHA 721
Query: 127 GPPSPLNPLQGISQAPQRPQAPGPRGAAEQ---SQGSPC--VRQEKTRVSGALSRPSTTE 181
G PS P + + AP P GA+ Q +QG PC + + GA S
Sbjct: 722 GSPSLKTPDGPVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEGASS------ 775
Query: 182 LRGRAPGGSVNAGTETAKVLGEEFVILLPLLQLPLQLAP--VADQGLGP 228
APG V A A LP+ Q P + P VA GL P
Sbjct: 776 ---AAPGSPVPAPPTKASA--------LPVEQGPAEPIPPGVASGGLRP 813
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 32.0 bits (71), Expect = 0.78
Identities = 18/58 (31%), Positives = 22/58 (37%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 159
PS G N+ D G++ +GPP P QG Q P P R QG
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG 115
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 32.0 bits (71), Expect = 0.78
Identities = 18/58 (31%), Positives = 22/58 (37%)
Query: 102 PSGGRQNEGDSENVSAALALGEEARGPPSPLNPLQGISQAPQRPQAPGPRGAAEQSQG 159
PS G N+ D G++ +GPP P QG Q P P R QG
Sbjct: 58 PSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQG 115
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,870,465
Number of Sequences: 37866
Number of extensions: 872420
Number of successful extensions: 4051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 3851
Number of HSP's gapped (non-prelim): 328
length of query: 331
length of database: 18,247,518
effective HSP length: 103
effective length of query: 228
effective length of database: 14,347,320
effective search space: 3271188960
effective search space used: 3271188960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.