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Search of human proteins with 239751127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751127 PREDICTED: hypothetical protein XP_002347720 [Homo
sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756647 PREDICTED: hypothetical protein [Homo sapiens] 394 e-110
gi|239751127 PREDICTED: hypothetical protein XP_002347720 [Homo ... 394 e-110
gi|239745618 PREDICTED: hypothetical protein XP_002344144 [Homo ... 394 e-110
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 33 0.15
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|93588611 angiotensin II receptor-associated protein isoform e... 31 0.58
gi|93588498 angiotensin II receptor-associated protein isoform c... 31 0.58
gi|93588503 angiotensin II receptor-associated protein isoform d... 31 0.58
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 31 0.76
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 31 0.76
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 31 0.76
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 31 0.76
gi|23110966 light ear protein isoform a [Homo sapiens] 30 0.99
gi|23110970 light ear protein isoform b [Homo sapiens] 30 0.99
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 30 1.7
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens] 30 1.7
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 29 2.2
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 29 2.2
gi|92091575 coiled-coil domain containing 57 [Homo sapiens] 29 2.2
gi|45580709 unc-93 homolog B1 [Homo sapiens] 29 2.9
gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens] 28 3.7
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 28 3.7
gi|94536854 thrombospondin, type I, domain containing 4 [Homo sa... 28 3.7
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 28 4.9
gi|239753437 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 28 4.9
>gi|239756647 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 394 bits (1012), Expect = e-110
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD
Sbjct: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
Query: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG
Sbjct: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
Query: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG
Sbjct: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
Query: 181 PVGVFAQIHRLRHV 194
PVGVFAQIHRLRHV
Sbjct: 181 PVGVFAQIHRLRHV 194
>gi|239751127 PREDICTED: hypothetical protein XP_002347720 [Homo
sapiens]
Length = 194
Score = 394 bits (1012), Expect = e-110
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD
Sbjct: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
Query: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG
Sbjct: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
Query: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG
Sbjct: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
Query: 181 PVGVFAQIHRLRHV 194
PVGVFAQIHRLRHV
Sbjct: 181 PVGVFAQIHRLRHV 194
>gi|239745618 PREDICTED: hypothetical protein XP_002344144 [Homo
sapiens]
Length = 194
Score = 394 bits (1012), Expect = e-110
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD
Sbjct: 1 MLLAPQVLEVAVLQGLPRVLRERALLHRFPQGVTGDGAGRAGIFLHVGKDGYVVRIREGD 60
Query: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG
Sbjct: 61 PPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRG 120
Query: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG
Sbjct: 121 LGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGG 180
Query: 181 PVGVFAQIHRLRHV 194
PVGVFAQIHRLRHV
Sbjct: 181 PVGVFAQIHRLRHV 194
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 33.1 bits (74), Expect = 0.15
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Query: 64 VPLRLRLRGALGQGPGLCFRAGVRRRGGAQP-IGLQLQPLV----ALHAVQDVLRGDEIT 118
VPL+ + A G P GV G QP I QP + A VQ L G
Sbjct: 565 VPLQATMSAATGIQPSPVNVVGVTSALGQQPSISSLAQPQLPYSQAAPPVQTPLPGAPPP 624
Query: 119 RGL--GQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTL------GRAGPHVEGHGAAVV 170
+ L GQ+ P + Q PG + S A + ++QP L G+ G G V+
Sbjct: 625 QQLQYGQQQPMVSTQMAPGHVKSVTQNPASEYVQQQPILQTAMSSGQPSSAGVGAGTTVI 684
Query: 171 PHEQSRGMGGPV 182
P Q +G+ PV
Sbjct: 685 PVAQPQGIQLPV 696
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.7 bits (73), Expect = 0.20
Identities = 56/177 (31%), Positives = 63/177 (35%), Gaps = 42/177 (23%)
Query: 28 RFPQGVTGDG--AGR-------AGIFLHVGKDGYVVRI-----REGDPPGVPLRLRLRGA 73
R P GV G G GR AG + V G + I + G P + L GA
Sbjct: 524 RLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGA 583
Query: 74 LGQGPGLCFRAG-----VRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRGLGQRLPGL 128
LG GL RRRGG P + + H G G PGL
Sbjct: 584 LGGRAGLVAAPARRECPARRRGGCWPRRPRRR-----HG-----------GGGGGGGPGL 627
Query: 129 GQQHGPGLLHSAHGAAAVQDERRQPTL--GRAGPHVEGHGAAVVPHEQSRGMGGPVG 183
G G AHG V PT GRAG H GH A V P + G PVG
Sbjct: 628 QDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGRH--GHVAVVCPQVAA---GAPVG 679
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.7 bits (73), Expect = 0.20
Identities = 56/177 (31%), Positives = 63/177 (35%), Gaps = 42/177 (23%)
Query: 28 RFPQGVTGDG--AGR-------AGIFLHVGKDGYVVRI-----REGDPPGVPLRLRLRGA 73
R P GV G G GR AG + V G + I + G P + L GA
Sbjct: 524 RLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGA 583
Query: 74 LGQGPGLCFRAG-----VRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRGLGQRLPGL 128
LG GL RRRGG P + + H G G PGL
Sbjct: 584 LGGRAGLVAAPARRECPARRRGGCWPRRPRRR-----HG-----------GGGGGGGPGL 627
Query: 129 GQQHGPGLLHSAHGAAAVQDERRQPTL--GRAGPHVEGHGAAVVPHEQSRGMGGPVG 183
G G AHG V PT GRAG H GH A V P + G PVG
Sbjct: 628 QDLLGGGHAGGAHGHVVVAPAAAAPTAREGRAGRH--GHVAVVCPQVAA---GAPVG 679
>gi|93588611 angiotensin II receptor-associated protein isoform e
[Homo sapiens]
Length = 147
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 60 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 117
>gi|93588498 angiotensin II receptor-associated protein isoform c
[Homo sapiens]
Length = 111
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 16 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 73
>gi|93588503 angiotensin II receptor-associated protein isoform d
[Homo sapiens]
Length = 155
Score = 31.2 bits (69), Expect = 0.58
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 124 RLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGA--AVVPHEQSRGMG 179
RL LGQ H PGL G+A + + + AG H+ GH A ++P Q G G
Sbjct: 60 RLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHG 117
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 30.8 bits (68), Expect = 0.76
Identities = 51/173 (29%), Positives = 70/173 (40%), Gaps = 33/173 (19%)
Query: 30 PQGVTGDGAGRAGIFLHVGKDGYV----VRIREGDP-------PGVPLRLRLRGALGQGP 78
P+G G+ AGRAG G+DG + +GDP PG P ++G LG P
Sbjct: 2337 PRGEKGE-AGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGL-P 2394
Query: 79 GLCFRAGVRR-RGGAQPIGLQLQPLVALHAVQDVLRGDEITRGLG-----QRLPG-LGQQ 131
GL GV G P G QP G RGL + +PG LG
Sbjct: 2395 GLPGAPGVVGFPGQTGPRGEMGQP------------GPSGERGLAGPPGREGIPGPLGPP 2442
Query: 132 HGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGGPVGV 184
PG + GA+ ++ ++ P +G GP E + + G GP G+
Sbjct: 2443 GPPGSV-GPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGL 2494
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 30.8 bits (68), Expect = 0.76
Identities = 47/157 (29%), Positives = 60/157 (38%), Gaps = 19/157 (12%)
Query: 30 PQGVTGDGAGRAGIFLHVGKDGYVVRIREGDPPGVPLRLRLRGALGQ-GPGLCFRAGVRR 88
P+G G G+ G+ H G+ G V + PPG P + +GA G+ GP G R
Sbjct: 804 PKGPPGP-PGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGP-----MGERG 857
Query: 89 RGGAQ-PIGLQLQPLVALHAVQDVLRGDEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQ 147
G P G Q P A G E T+G PG + GP L G +
Sbjct: 858 HPGPPGPPGEQGLPGTA---------GKEGTKG-DPGPPGAPGKDGPAGLRGFPGERGLP 907
Query: 148 DERRQPTL-GRAGPHVEGHGAAVVPHEQSRGMGGPVG 183
P L G GP A + G GGP+G
Sbjct: 908 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIG 944
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
[Homo sapiens]
Length = 1629
Score = 30.8 bits (68), Expect = 0.76
Identities = 47/157 (29%), Positives = 60/157 (38%), Gaps = 19/157 (12%)
Query: 30 PQGVTGDGAGRAGIFLHVGKDGYVVRIREGDPPGVPLRLRLRGALGQ-GPGLCFRAGVRR 88
P+G G G+ G+ H G+ G V + PPG P + +GA G+ GP G R
Sbjct: 783 PKGPPGP-PGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGP-----MGERG 836
Query: 89 RGGAQ-PIGLQLQPLVALHAVQDVLRGDEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQ 147
G P G Q P A G E T+G PG + GP L G +
Sbjct: 837 HPGPPGPPGEQGLPGTA---------GKEGTKG-DPGPPGAPGKDGPAGLRGFPGERGLP 886
Query: 148 DERRQPTL-GRAGPHVEGHGAAVVPHEQSRGMGGPVG 183
P L G GP A + G GGP+G
Sbjct: 887 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIG 923
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 30.8 bits (68), Expect = 0.76
Identities = 47/157 (29%), Positives = 60/157 (38%), Gaps = 19/157 (12%)
Query: 30 PQGVTGDGAGRAGIFLHVGKDGYVVRIREGDPPGVPLRLRLRGALGQ-GPGLCFRAGVRR 88
P+G G G+ G+ H G+ G V + PPG P + +GA G+ GP G R
Sbjct: 890 PKGPPGP-PGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGP-----MGERG 943
Query: 89 RGGAQ-PIGLQLQPLVALHAVQDVLRGDEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQ 147
G P G Q P A G E T+G PG + GP L G +
Sbjct: 944 HPGPPGPPGEQGLPGTA---------GKEGTKG-DPGPPGAPGKDGPAGLRGFPGERGLP 993
Query: 148 DERRQPTL-GRAGPHVEGHGAAVVPHEQSRGMGGPVG 183
P L G GP A + G GGP+G
Sbjct: 994 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIG 1030
>gi|23110966 light ear protein isoform a [Homo sapiens]
Length = 708
Score = 30.4 bits (67), Expect = 0.99
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 61 PPGVPLRLRLRGA---LGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEI 117
PP P L GA L PG +A + R A P+ + + + L + RG+++
Sbjct: 427 PPSAPEMLTQHGAQEQLEDHPGHSSQAPIPR---ADPLPRRTRRPLLLPRLDPGQRGNKL 483
Query: 118 T---RGLGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQ 174
+GL + + G+ + H L + G+A Q AGP +G + + P E
Sbjct: 484 PTGEQGLDEDVDGVCESHAAPGLECSSGSANCQG---------AGPSADGISSRLTPAES 534
Query: 175 SRGM 178
G+
Sbjct: 535 CMGL 538
>gi|23110970 light ear protein isoform b [Homo sapiens]
Length = 703
Score = 30.4 bits (67), Expect = 0.99
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 18/124 (14%)
Query: 61 PPGVPLRLRLRGA---LGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEI 117
PP P L GA L PG +A + R A P+ + + + L + RG+++
Sbjct: 422 PPSAPEMLTQHGAQEQLEDHPGHSSQAPIPR---ADPLPRRTRRPLLLPRLDPGQRGNKL 478
Query: 118 T---RGLGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQ 174
+GL + + G+ + H L + G+A Q AGP +G + + P E
Sbjct: 479 PTGEQGLDEDVDGVCESHAAPGLECSSGSANCQG---------AGPSADGISSRLTPAES 529
Query: 175 SRGM 178
G+
Sbjct: 530 CMGL 533
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 29.6 bits (65), Expect = 1.7
Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 27/170 (15%)
Query: 31 QGVTGDGAGRAGIFLHVGKDGYVVRIREGDPPGVPLRLRLRGA-----LGQGPG---LCF 82
+G G+ A A +F G Y + PP R R + L GPG C
Sbjct: 52 RGRNGENADTARLF---GTTVYTFEVLGALPPDRSPTPRSRVSPGVTGLAVGPGNPKRCQ 108
Query: 83 RAGVRRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRGL-------GQRLP---GLGQQH 132
R+GV G P G QL+ A R D RG G P G +
Sbjct: 109 RSGVPYEGPGAPGGQQLRKSRARLPRTRPGREDAAVRGRNRDPAEPGSLRPTSLGFPARA 168
Query: 133 GPGLLHSAHGAAAVQDERRQPTLGRAGP-----HVEGHGAAVVPHEQSRG 177
G G + A ++ E + P GR+GP GH AA H+ G
Sbjct: 169 GQGQVQGAAPGRRLRGEPKTPP-GRSGPSGGVRSGAGHRAATAEHQLGAG 217
>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
Length = 547
Score = 29.6 bits (65), Expect = 1.7
Identities = 36/134 (26%), Positives = 45/134 (33%), Gaps = 20/134 (14%)
Query: 62 PGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQ--------LQPLVALHAVQDVLR 113
P P + R A G P + GG +G LQP+ A Q +LR
Sbjct: 16 PHPPSQRMRRSAAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQ-LLR 74
Query: 114 GDE----------ITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVE 163
G + LG LPG G GP AAA E+ GR E
Sbjct: 75 GSQHSPTRPPVAAAAASLGS-LPGPGAARGPSPSSPTPPAAAAPAEQAPRAKGRPRRSPE 133
Query: 164 GHGAAVVPHEQSRG 177
H + P +S G
Sbjct: 134 SHRRSSSPERRSPG 147
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 120 GLGQ-RLPGLGQQHGPGLLHSAHGAAAVQDERRQ-PTLGRAGPHVEGHGAAVVPHEQSRG 177
G G+ R L Q HG G SA AV+D + + GR GP G G A Q+RG
Sbjct: 195 GCGEARRSALQQLHGGGNRPSAPSRVAVEDPWLEVSSSGRGGPG-RGQGLA---GSQARG 250
Query: 178 MGGPVGVFAQIHRL 191
P A +H L
Sbjct: 251 TRDPEAAQAMLHHL 264
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 29.3 bits (64), Expect = 2.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 153 PTLGRAGPHVEGHGAAVVP 171
PTLG AGP +EG G A P
Sbjct: 445 PTLGGAGPRLEGRGGAAPP 463
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 29.3 bits (64), Expect = 2.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 153 PTLGRAGPHVEGHGAAVVP 171
PTLG AGP +EG G A P
Sbjct: 535 PTLGGAGPRLEGRGGAAPP 553
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 29.3 bits (64), Expect = 2.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 153 PTLGRAGPHVEGHGAAVVP 171
PTLG AGP +EG G A P
Sbjct: 535 PTLGGAGPRLEGRGGAAPP 553
>gi|92091575 coiled-coil domain containing 57 [Homo sapiens]
Length = 915
Score = 29.3 bits (64), Expect = 2.2
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 86 VRRRGGAQPIGLQLQPL---VALHAVQDVLRGDEI-TRGLGQRLPGLGQQ-------HGP 134
+ + GGA+P G + P VAL DE +R LG+ P Q GP
Sbjct: 722 IAQHGGAEPSGRKQPPASDAVALGREDAKSAEDEAPSRHLGKHQPRSAQVGSRLDALQGP 781
Query: 135 GLLHSAHGAAAV---QDERRQPTLGRAGPHVEGHG 166
HS H Q E R P +A H E HG
Sbjct: 782 KTQHSIHTVTCKSPRQKEDRSPKPPQAPQHPEEHG 816
>gi|45580709 unc-93 homolog B1 [Homo sapiens]
Length = 597
Score = 28.9 bits (63), Expect = 2.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 141 HGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGMGGP 181
HG A +E P R GP G G P+EQ++G GP
Sbjct: 556 HGDGA--EEEAPPAGPRPGPEPAGLGRRPCPYEQAQGGDGP 594
>gi|239754378 PREDICTED: similar to hCG2030094 [Homo sapiens]
Length = 282
Score = 28.5 bits (62), Expect = 3.7
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 20/107 (18%)
Query: 55 RIREGDPPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQDVLRG 114
R +G P L L RGA G G G R + +L + A + +
Sbjct: 92 RSGQGRPLSRALTLPGRGARG-GQGGAVRRAAEAVAAVAAVQRELADVAAARRAVEEVAA 150
Query: 115 DEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPH 161
+ RG G PG LH HGAA LG AG H
Sbjct: 151 EHGCRGRG----------APGQLHHGHGAA---------RLGAAGRH 178
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 28.5 bits (62), Expect = 3.7
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 29 FPQGVTGDGA--GRAGIFLHVGKDGYVVRIREGDPPGVPLRLRLRGALGQGPGLCFRAGV 86
FP G G+ G+AG+ G G PPG P R G G GPG GV
Sbjct: 52 FPPGAKGEVGRRGKAGLRGPPGPPG------PRGPPGEPGRPGPPGPPGPGPG-----GV 100
Query: 87 RRRGGAQPIGLQLQPLVALHAVQDVLRGDEITRGLG 122
G P L H +VLR D++ +G
Sbjct: 101 APAAGYVPRIAFYAGLRRPHEGYEVLRFDDVVTNVG 136
>gi|94536854 thrombospondin, type I, domain containing 4 [Homo
sapiens]
Length = 1018
Score = 28.5 bits (62), Expect = 3.7
Identities = 50/178 (28%), Positives = 67/178 (37%), Gaps = 32/178 (17%)
Query: 7 VLEVAVLQGLPRVLRERALLHR-FPQGVTGDGA-------GRAGIFLHVGKDGYVVR--- 55
VL +L G V + + HR PQ + +GA G G++ G R
Sbjct: 11 VLCFLLLLGFQFVCPQPSTQHRKVPQRMAAEGAPEDDGGGGAPGVWGAWGPWSACSRSCS 70
Query: 56 --IREGDPPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQPIGLQLQPLVALHAVQD--- 110
+ E P +P RLRG GQ PG RA A + ++ V LH +D
Sbjct: 71 GGVMEQTRPCLPRSYRLRG--GQRPGAPARAF------ADHVVSAVRTSVPLHRSRDETP 122
Query: 111 VLRGDEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTLGRAGPHVEGHGAA 168
L G + +R L G GL V +RR T G GP G+G A
Sbjct: 123 ALAGTDASRQGPTVLRGSRHPQPQGL--------EVTGDRRSRTRGTIGPGKYGYGKA 172
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 28.1 bits (61), Expect = 4.9
Identities = 40/144 (27%), Positives = 52/144 (36%), Gaps = 20/144 (13%)
Query: 48 GKDGYVVRIREGDPPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQ-----PIGLQLQPL 102
G+ VR R D G + R G + RAG RRGG + +G++ Q
Sbjct: 298 GEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCGHVRVGVREQAS 357
Query: 103 VALHAV----QDVLRGDEITRGL---GQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTL 155
H QDVL E G GQ L G+ HG G+ G
Sbjct: 358 ERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGG-------PRNR 410
Query: 156 GRAGPHVEG-HGAAVVPHEQSRGM 178
G+ G H G H PH + G+
Sbjct: 411 GQEGTHASGRHAGEGAPHGKLAGV 434
>gi|239753437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 28.1 bits (61), Expect = 4.9
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 83 RAGVRRRGGAQPIGLQLQPLVALHAVQDV--LRGDEITRGLGQRLPGLGQQHGPGLLHSA 140
RAG R ++ L P + A D L+G + R G + G ++ P L H
Sbjct: 53 RAGAARTTKSE--SLPAPPATSRPAAGDKKPLQGQTLRRASGLQATGRAEEVKPPLAHQG 110
Query: 141 HGAAAVQDERRQPTLGRAGPHVEGHGAAVVPHEQSRGM 178
H A + + Q RA H V H S GM
Sbjct: 111 H--APWEPQNGQKKFPRARKHFPHRNTHVDTHPLSAGM 146
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 28.1 bits (61), Expect = 4.9
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Query: 111 VLRGDEITRGLGQRLPGLGQQHGPGLLHSAHGAAAVQD---ERRQPTL-------GRAGP 160
V +GD +G+G + GPGL + +D +RR+PT G P
Sbjct: 129 VQKGDFGPKGIGMK------GGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRP 182
Query: 161 HVEGHGAAVVPHEQSRGMGGP 181
V G GAA V R G P
Sbjct: 183 GVRGQGAAAVGPTGPRPTGAP 203
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 28.1 bits (61), Expect = 4.9
Identities = 40/144 (27%), Positives = 52/144 (36%), Gaps = 20/144 (13%)
Query: 48 GKDGYVVRIREGDPPGVPLRLRLRGALGQGPGLCFRAGVRRRGGAQ-----PIGLQLQPL 102
G+ VR R D G + R G + RAG RRGG + +G++ Q
Sbjct: 155 GEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCGHVRVGVREQAS 214
Query: 103 VALHAV----QDVLRGDEITRGL---GQRLPGLGQQHGPGLLHSAHGAAAVQDERRQPTL 155
H QDVL E G GQ L G+ HG G+ G
Sbjct: 215 ERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGG-------PRNR 267
Query: 156 GRAGPHVEG-HGAAVVPHEQSRGM 178
G+ G H G H PH + G+
Sbjct: 268 GQEGTHASGRHAGEGAPHGKLAGV 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.146 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,163,740
Number of Sequences: 37866
Number of extensions: 513732
Number of successful extensions: 1048
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1016
Number of HSP's gapped (non-prelim): 70
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.