BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239750897 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] (263 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239756373 PREDICTED: similar to elongation factor Tu GTP bind... 536 e-153 gi|239750897 PREDICTED: similar to elongation factor Tu GTP bind... 536 e-153 gi|239745282 PREDICTED: similar to elongation factor Tu GTP bind... 536 e-153 gi|94966754 elongation factor Tu GTP binding domain containing 1... 244 7e-65 gi|4503483 eukaryotic translation elongation factor 2 [Homo sapi... 129 3e-30 gi|94966752 elongation factor Tu GTP binding domain containing 1... 112 3e-25 gi|157426893 GUF1 GTPase homolog [Homo sapiens] 100 2e-21 gi|217272894 elongation factor Tu GTP binding domain containing ... 84 1e-16 gi|217272892 elongation factor Tu GTP binding domain containing ... 84 1e-16 gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 76 3e-14 gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo s... 75 8e-14 gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo s... 75 8e-14 gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo s... 75 8e-14 gi|34147630 Tu translation elongation factor, mitochondrial prec... 62 4e-10 gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 53 2e-07 gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 53 2e-07 gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 49 3e-06 gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 48 1e-05 gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 48 1e-05 gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 48 1e-05 gi|53729339 mitochondrial translational initiation factor 2 prec... 40 0.002 gi|53729337 mitochondrial translational initiation factor 2 prec... 40 0.002 gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 37 0.013 gi|46094014 peptide chain release factor 3 [Homo sapiens] 36 0.030 gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 36 0.030 gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 36 0.030 gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 36 0.030 gi|190343021 Sec24-related protein D [Homo sapiens] 32 0.43 gi|57222570 codanin 1 [Homo sapiens] 32 0.74 gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 31 0.96 >gi|239756373 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 536 bits (1382), Expect = e-153 Identities = 263/263 (100%), Positives = 263/263 (100%) Query: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH Sbjct: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 Query: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA Sbjct: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263 CDGCIIVVDAVEGVCPQPREWRD Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263 >gi|239750897 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 536 bits (1382), Expect = e-153 Identities = 263/263 (100%), Positives = 263/263 (100%) Query: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH Sbjct: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 Query: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA Sbjct: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263 CDGCIIVVDAVEGVCPQPREWRD Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263 >gi|239745282 PREDICTED: similar to elongation factor Tu GTP binding domain containing 1 [Homo sapiens] Length = 263 Score = 536 bits (1382), Expect = e-153 Identities = 263/263 (100%), Positives = 263/263 (100%) Query: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH Sbjct: 1 MPETAWYMPAGAERVFVGRDKCGSRCALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQH 60 Query: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA Sbjct: 61 LQLLHSYSARRRQGNRGMPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGA 120 Query: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH Sbjct: 121 GLVGLLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSH 180 Query: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI Sbjct: 181 LAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRI 240 Query: 241 CDGCIIVVDAVEGVCPQPREWRD 263 CDGCIIVVDAVEGVCPQPREWRD Sbjct: 241 CDGCIIVVDAVEGVCPQPREWRD 263 >gi|94966754 elongation factor Tu GTP binding domain containing 1 isoform 1 [Homo sapiens] Length = 1120 Score = 244 bits (622), Expect = 7e-65 Identities = 122/126 (96%), Positives = 124/126 (98%) Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191 MVLNSLDKMIQLQKNTANIRNICVLAHVD GKTTLADCLISSNGIISS LAGKLRYMDSR Sbjct: 1 MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR 60 Query: 192 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAV 251 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGH+DFSS+VSTAVRICDGCIIVVDAV Sbjct: 61 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV 120 Query: 252 EGVCPQ 257 EGVCPQ Sbjct: 121 EGVCPQ 126 >gi|4503483 eukaryotic translation elongation factor 2 [Homo sapiens] Length = 858 Score = 129 bits (324), Expect = 3e-30 Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 12/138 (8%) Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191 MV ++D++ + ANIRN+ V+AHVD GK+TL D L+ GII+S AG+ R+ D+R Sbjct: 1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTR 60 Query: 192 EDEQIRGITMKSSAISLHYATGNEE------------YLINLIDSPGHMDFSSDVSTAVR 239 +DEQ R IT+KS+AISL Y + +LINLIDSPGH+DFSS+V+ A+R Sbjct: 61 KDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALR 120 Query: 240 ICDGCIIVVDAVEGVCPQ 257 + DG ++VVD V GVC Q Sbjct: 121 VTDGALVVVDCVSGVCVQ 138 >gi|94966752 elongation factor Tu GTP binding domain containing 1 isoform 2 [Homo sapiens] Length = 1069 Score = 112 bits (280), Expect = 3e-25 Identities = 67/126 (53%), Positives = 72/126 (57%), Gaps = 51/126 (40%) Query: 132 MVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSR 191 MVLNSLDKMIQLQKNTANIRNI C+++ Sbjct: 1 MVLNSLDKMIQLQKNTANIRNI---------------CVLA------------------- 26 Query: 192 EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAV 251 H GNEEYLINLIDSPGH+DFSS+VSTAVRICDGCIIVVDAV Sbjct: 27 -----------------HVDHGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV 69 Query: 252 EGVCPQ 257 EGVCPQ Sbjct: 70 EGVCPQ 75 >gi|157426893 GUF1 GTPase homolog [Homo sapiens] Length = 669 Score = 99.8 bits (247), Expect = 2e-21 Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 149 NIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISL 208 NIRN ++AHVD GK+TLAD L+ G I K + +D + E+ RGIT+K+ SL Sbjct: 67 NIRNFSIVAHVDHGKSTLADRLLELTGTIDKTKNNK-QVLDKLQVERERGITVKAQTASL 125 Query: 209 HYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQ 257 Y ++YL+NLID+PGH+DFS +VS ++ C G ++VVDA EG+ Q Sbjct: 126 FYNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQ 174 >gi|217272894 elongation factor Tu GTP binding domain containing 2 isoform b [Homo sapiens] Length = 937 Score = 84.3 bits (207), Expect = 1e-16 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%) Query: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183 L++ + + + +D + L N+ IRN+ + H+ GKT DCLI ++ I Sbjct: 69 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 128 Query: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242 L Y D EQ RG+ +KS+ +++ T + YL N++D+PGH++FS +V+ +RI D Sbjct: 129 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 188 Query: 243 GCIIVVDAVEGV 254 G ++ +DA EGV Sbjct: 189 GVVLFIDAAEGV 200 >gi|217272892 elongation factor Tu GTP binding domain containing 2 isoform a [Homo sapiens] Length = 972 Score = 84.3 bits (207), Expect = 1e-16 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 2/132 (1%) Query: 125 LLQPEIIMVLNSLDKMIQLQKNTANIRNICVLAHVDRGKTTLADCLIS-SNGIISSHLAG 183 L++ + + + +D + L N+ IRN+ + H+ GKT DCLI ++ I Sbjct: 104 LMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQ 163 Query: 184 KLRYMDSREDEQIRGITMKSSAISLHYA-TGNEEYLINLIDSPGHMDFSSDVSTAVRICD 242 L Y D EQ RG+ +KS+ +++ T + YL N++D+PGH++FS +V+ +RI D Sbjct: 164 DLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISD 223 Query: 243 GCIIVVDAVEGV 254 G ++ +DA EGV Sbjct: 224 GVVLFIDAAEGV 235 >gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] Length = 751 Score = 75.9 bits (185), Expect = 3e-14 Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 9/110 (8%) Query: 150 IRNICVLAHVDRGKTTLADCLISSNGIISS--HLAGKL---RYMDSREDEQIRGITMKSS 204 IRNI + AH+D GKTTL + ++ G I+ + GK MDS E E+ RGIT++S+ Sbjct: 46 IRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSA 105 Query: 205 AISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 A + N IN+ID+PGH+DF+ +V A+R+ DG ++V+ AV GV Sbjct: 106 ATYTMWKDVN----INIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGV 151 >gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo sapiens] Length = 732 Score = 74.7 bits (182), Expect = 8e-14 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 >gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo sapiens] Length = 513 Score = 74.7 bits (182), Expect = 8e-14 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 >gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo sapiens] Length = 779 Score = 74.7 bits (182), Expect = 8e-14 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 148 ANIRNICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSRED----EQIRGITMKS 203 A IRNI ++AH+D GKTT + ++ +G S G + D+ D E+ RGIT++S Sbjct: 68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRS--LGDVDDGDTVTDFMAQERERGITIQS 125 Query: 204 SAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGV 254 +A++ + + Y +NLID+PGH+DF+ +V +R+ DG + V DA GV Sbjct: 126 AAVTFDW----KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGV 172 >gi|34147630 Tu translation elongation factor, mitochondrial precursor [Homo sapiens] Length = 455 Score = 62.4 bits (150), Expect = 4e-10 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYA 211 N+ + HVD GKTTL + K +D+ +E+ RGIT+ +A + Y+ Sbjct: 62 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITI--NAAHVEYS 119 Query: 212 TGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260 T Y D PGH D+ ++ T DGCI+VV A +G PQ RE Sbjct: 120 TAARHYAHT--DCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTRE 166 >gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2 [Homo sapiens] Length = 642 Score = 53.1 bits (126), Expect = 2e-07 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%) Query: 137 LDKMIQLQKNTAN--IRNICVLAHVDRGKTTLADCLISSNGIIS----------SHLAGK 184 +D +L+K + N+ V+ HVD GK+TL ++ G I+ S AGK Sbjct: 203 IDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGK 262 Query: 185 LRY-----MDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVR 239 + +D +E+ RG+TM T +I L+D+PGH DF ++ T Sbjct: 263 ASFAYAWVLDETGEERERGVTMDVGMTKFETTTK----VITLMDAPGHKDFIPNMITGAA 318 Query: 240 ICDGCIIVVDAVEG 253 D ++VVDA G Sbjct: 319 QADVAVLVVDASRG 332 >gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1 [Homo sapiens] Length = 684 Score = 53.1 bits (126), Expect = 2e-07 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%) Query: 137 LDKMIQLQKNTAN--IRNICVLAHVDRGKTTLADCLISSNGIIS----------SHLAGK 184 +D +L+K + N+ V+ HVD GK+TL ++ G I+ S AGK Sbjct: 245 IDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGK 304 Query: 185 LRY-----MDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVR 239 + +D +E+ RG+TM T +I L+D+PGH DF ++ T Sbjct: 305 ASFAYAWVLDETGEERERGVTMDVGMTKFETTTK----VITLMDAPGHKDFIPNMITGAA 360 Query: 240 ICDGCIIVVDAVEG 253 D ++VVDA G Sbjct: 361 QADVAVLVVDASRG 374 >gi|84043963 eukaryotic translation initiation factor 5B [Homo sapiens] Length = 1220 Score = 49.3 bits (116), Expect = 3e-06 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 32/131 (24%) Query: 146 NTANIRN--ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKS 203 NT +R ICVL HVD GKT + D KLR+ +D + GIT + Sbjct: 625 NTEKLRAPIICVLGHVDTGKTKILD---------------KLRHTHV-QDGEAGGITQQI 668 Query: 204 SAISLHYATGNEEYLIN--------------LIDSPGHMDFSSDVSTAVRICDGCIIVVD 249 A ++ NE+ + +ID+PGH FS+ + +CD I+VVD Sbjct: 669 GATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVD 728 Query: 250 AVEGVCPQPRE 260 + G+ PQ E Sbjct: 729 IMHGLEPQTIE 739 >gi|239757543 PREDICTED: similar to eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 444 Score = 47.8 bits (112), Expect = 1e-05 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196 NI V+ HVD GK+T LI G I G +Y +D + E+ Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 RGIT+ S +Y I +ID+PGH DF ++ T D +++V A G Sbjct: 69 RGITIDISLWKFE----TTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121 >gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo sapiens] Length = 462 Score = 47.8 bits (112), Expect = 1e-05 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196 NI V+ HVD GK+T LI G I G +Y +D + E+ Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 RGIT+ S +Y + +ID+PGH DF ++ T D +++V A G Sbjct: 69 RGITIDISLWKFE----TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121 >gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] Length = 463 Score = 47.8 bits (112), Expect = 1e-05 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLA------------GKLRY---MDSREDEQI 196 NI V+ HVD GK+T LI G I G +Y +D + E+ Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERE 68 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 RGIT+ S +Y I +ID+PGH DF ++ T D +++V A G Sbjct: 69 RGITIDISLWKFE----TTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVG 121 >gi|53729339 mitochondrial translational initiation factor 2 precursor [Homo sapiens] Length = 727 Score = 40.4 bits (93), Expect = 0.002 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 19/108 (17%) Query: 153 ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYAT 212 + ++ HVD GKTTL D K R E GIT A + + Sbjct: 183 VTIMGHVDHGKTTLLD---------------KFRKTQVAAVET-GGITQHIGAFLVSLPS 226 Query: 213 GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260 G + I +D+PGH FS+ + ++ D ++VV A +GV Q E Sbjct: 227 GEK---ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVE 271 >gi|53729337 mitochondrial translational initiation factor 2 precursor [Homo sapiens] Length = 727 Score = 40.4 bits (93), Expect = 0.002 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 19/108 (17%) Query: 153 ICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITMKSSAISLHYAT 212 + ++ HVD GKTTL D K R E GIT A + + Sbjct: 183 VTIMGHVDHGKTTLLD---------------KFRKTQVAAVET-GGITQHIGAFLVSLPS 226 Query: 213 GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEGVCPQPRE 260 G + I +D+PGH FS+ + ++ D ++VV A +GV Q E Sbjct: 227 GEK---ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVE 271 >gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-specific [Homo sapiens] Length = 596 Score = 37.4 bits (85), Expect = 0.013 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 30/130 (23%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLRYMDSREDEQIRGITM---------- 201 N+ VL H+D GKT LA L ++ + D + + RGIT+ Sbjct: 9 NVGVLGHIDSGKTALARALSTTASTAA---------FDKQPQSRERGITLDLGFSCFSVP 59 Query: 202 -----KSSAISLHYAT------GNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDA 250 +SS A G + L+D PGH + +I D ++V+D Sbjct: 60 LPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDV 119 Query: 251 VEGVCPQPRE 260 +G+ Q E Sbjct: 120 TKGMQTQSAE 129 >gi|46094014 peptide chain release factor 3 [Homo sapiens] Length = 628 Score = 36.2 bits (82), Expect = 0.030 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196 N+ + HVD GK+T+ ++ G++ K +D+ ++E+ Sbjct: 205 NVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 264 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 +G T++ ++ T + + I +D+PGH F ++ D ++V+ A +G Sbjct: 265 KGKTVEVG--RAYFETERKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 317 >gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] Length = 499 Score = 36.2 bits (82), Expect = 0.030 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196 N+ + HVD GK+T+ ++ G++ K +D+ ++E+ Sbjct: 76 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 135 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 +G T++ ++ T + + I +D+PGH F ++ D ++V+ A +G Sbjct: 136 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 188 >gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] Length = 636 Score = 36.2 bits (82), Expect = 0.030 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196 N+ + HVD GK+T+ ++ G++ K +D+ ++E+ Sbjct: 213 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 272 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 +G T++ ++ T + + I +D+PGH F ++ D ++V+ A +G Sbjct: 273 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 325 >gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] Length = 637 Score = 36.2 bits (82), Expect = 0.030 Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 19/117 (16%) Query: 152 NICVLAHVDRGKTTLADCLISSNGIISSHLAGKLR---------------YMDSREDEQI 196 N+ + HVD GK+T+ ++ G++ K +D+ ++E+ Sbjct: 214 NVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERD 273 Query: 197 RGITMKSSAISLHYATGNEEYLINLIDSPGHMDFSSDVSTAVRICDGCIIVVDAVEG 253 +G T++ ++ T + + I +D+PGH F ++ D ++V+ A +G Sbjct: 274 KGKTVEVG--RAYFETEKKHFTI--LDAPGHKSFVPNMIGGASQADLAVLVISARKG 326 >gi|190343021 Sec24-related protein D [Homo sapiens] Length = 1032 Score = 32.3 bits (72), Expect = 0.43 Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 13/150 (8%) Query: 78 MPGDRLGAGFRRRKRSVRAGVLDPQSSRRFRSSWCGRDPGEGAGLVGLLQPEIIMVLNSL 137 +PG LGAG+ ++ + + Q S + G PG A + G QP+ + +S+ Sbjct: 211 LPGQTLGAGYPPQQANSGPQMAGAQLS------YPGGFPGGPAQMAGPPQPQKKLDPDSI 264 Query: 138 DKMIQLQKNTANIRNICVLAHVDRGK---TTLADCLISSNGIISSHLAGKLRYMDSREDE 194 IQ+ +N R V A RG+ DC+I G S Y + Sbjct: 265 PSPIQVIENDRASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSD 324 Query: 195 QIRGITMKSSAISLHYAT--GNEE--YLIN 220 + + +A+ +AT NE YL+N Sbjct: 325 MAKQAQIPLAAVIKPFATIPSNESPLYLVN 354 >gi|57222570 codanin 1 [Homo sapiens] Length = 1227 Score = 31.6 bits (70), Expect = 0.74 Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 27 ALVPSSPGDGHSQGSRGARSVHLGPRVSFTAPQHLQLLHSYSARRRQGNRGMPGDRLGAG 86 A +P PG G +GSRGARS P + + L RR G R PG G Sbjct: 80 AALPGRPG-GPPRGSRGARSQLFPPTEAQSTAAEAPLA------RRGGRRRGPGPARERG 132 Query: 87 FRRRKRSVRAGVLDPQSSRRFRSS 110 R + V L RR R S Sbjct: 133 GRGLEEGVSGESLPGAGGRRLRGS 156 >gi|41152097 DNA segment on chromosome X and Y (unique) 155 expressed sequence isoform 1 [Homo sapiens] Length = 695 Score = 31.2 bits (69), Expect = 0.96 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Query: 31 SSPGDGHSQGSRGARSVHL----GPRVSFTAPQHLQLLHSYSA--RRRQGNRGMPGDRLG 84 SS DG + R H PR T+P H + S+S RR+ +R G Sbjct: 610 SSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASR 669 Query: 85 AGFRRRKRSVRAGVLDPQSSRRFRSSW 111 R R+RS R+ P R RS+W Sbjct: 670 KHSRHRRRSERSRSRSPS---RHRSTW 693 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,167,411 Number of Sequences: 37866 Number of extensions: 522734 Number of successful extensions: 1361 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1306 Number of HSP's gapped (non-prelim): 47 length of query: 263 length of database: 18,247,518 effective HSP length: 100 effective length of query: 163 effective length of database: 14,460,918 effective search space: 2357129634 effective search space used: 2357129634 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.