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Search of human proteins with 239750872
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750872 PREDICTED: similar to taste receptor protein 1
[Homo sapiens]
(562 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756347 PREDICTED: similar to taste receptor protein 1 [Hom... 1139 0.0
gi|239750872 PREDICTED: similar to taste receptor protein 1 [Hom... 1139 0.0
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 829 0.0
gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens] 48 2e-05
gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens] 40 0.004
gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] 40 0.006
gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens] 39 0.017
gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens] 39 0.017
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 39 0.017
gi|83367077 mucin 16 [Homo sapiens] 36 0.082
gi|239757138 PREDICTED: hypothetical protein, partial [Homo sapi... 36 0.082
gi|239751012 PREDICTED: similar to hCG2041351 [Homo sapiens] 36 0.11
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.41
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.41
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 34 0.41
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 34 0.41
gi|157168349 F-box and leucine-rich repeat protein 19 [Homo sapi... 34 0.41
gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 33 0.53
gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens] 33 0.53
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 33 0.70
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 33 0.70
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 33 0.70
gi|71043876 undifferentiated embryonic cell transcription factor... 32 1.2
gi|51988914 fibroblast growth factor receptor-like 1 precursor [... 32 1.5
gi|51988910 fibroblast growth factor receptor-like 1 precursor [... 32 1.5
gi|51988912 fibroblast growth factor receptor-like 1 precursor [... 32 1.5
gi|241982780 programmed cell death 6 interacting protein isoform... 32 2.0
gi|22027538 programmed cell death 6 interacting protein isoform ... 32 2.0
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|7524363 paired box 8 isoform PAX8C [Homo sapiens] 31 2.6
>gi|239756347 PREDICTED: similar to taste receptor protein 1 [Homo
sapiens]
Length = 562
Score = 1139 bits (2946), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS
Sbjct: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
Query: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET
Sbjct: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
Query: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW
Sbjct: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
Query: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG
Sbjct: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
Query: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF
Sbjct: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
Query: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL
Sbjct: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
Query: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI
Sbjct: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
Query: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP 480
SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP
Sbjct: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP 480
Query: 481 IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG 540
IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG
Sbjct: 481 IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG 540
Query: 541 AKESHRGGARLKGLHPGAQSYP 562
AKESHRGGARLKGLHPGAQSYP
Sbjct: 541 AKESHRGGARLKGLHPGAQSYP 562
>gi|239750872 PREDICTED: similar to taste receptor protein 1 [Homo
sapiens]
Length = 562
Score = 1139 bits (2946), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS
Sbjct: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
Query: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET
Sbjct: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
Query: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW
Sbjct: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
Query: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG
Sbjct: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
Query: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF
Sbjct: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
Query: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL
Sbjct: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
Query: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI
Sbjct: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
Query: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP 480
SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP
Sbjct: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP 480
Query: 481 IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG 540
IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG
Sbjct: 481 IPHQKESELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVTSGKLLSLLG 540
Query: 541 AKESHRGGARLKGLHPGAQSYP 562
AKESHRGGARLKGLHPGAQSYP
Sbjct: 541 AKESHRGGARLKGLHPGAQSYP 562
>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 664
Score = 829 bits (2141), Expect = 0.0
Identities = 427/455 (93%), Positives = 428/455 (94%), Gaps = 18/455 (3%)
Query: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS
Sbjct: 221 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 280
Query: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET
Sbjct: 281 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 340
Query: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW
Sbjct: 341 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 400
Query: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN G
Sbjct: 401 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN------------------G 442
Query: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
EKAELVLYEVWLQILVQPYTKALEDKTSP+ L LT LNFILRPLQNFDQVVVEEF
Sbjct: 443 EKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLLTPQLNFILRPLQNFDQVVVEEF 502
Query: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL
Sbjct: 503 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 562
Query: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI
Sbjct: 563 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 622
Query: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNR 455
SCLTFLS LPQAEEKGQPPIRPLPTLKPLKPGPNR
Sbjct: 623 SCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNR 657
>gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens]
Length = 1241
Score = 48.1 bits (113), Expect = 2e-05
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 9 ITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLV 68
+TN FS L N S +++ L + L P GFQ + +L FR GS+ VN+ +
Sbjct: 907 VTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLTGFQNLEILNFRNGSIVVNSRMK 966
Query: 69 FGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARETISIRFTAM 128
F P P+ ++ + T+ + NL++ + SL + D E +F A
Sbjct: 967 FANSVP-PNVNNAVYMILEDFCTTAYNTMNLAIDKYSLDVESGD------EANPCKFQAC 1019
Query: 129 RSFLPQLLVPGS 140
F L+ P S
Sbjct: 1020 NEFSECLVNPWS 1031
>gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens]
Length = 273
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 5 VTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVN 64
++F I+N F+++L +P++ +Q L++ I +Y + GF G+ + FRPGSV V
Sbjct: 63 LSFHISNLQFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVVQ 120
Query: 65 ASLVF 69
+L F
Sbjct: 121 LTLAF 125
>gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]
Length = 797
Score = 40.0 bits (92), Expect = 0.006
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 9 ITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLV 68
+ N AFS L N +S +++ L + L P GF+ + +L FR GSV VN+ +
Sbjct: 581 VANMAFSNDLFNKSSLEYRALEQQFTQLLVPYLRSNLTGFKQLEILNFRNGSVIVNSKMK 640
Query: 69 FGGRAP 74
F P
Sbjct: 641 FAKSVP 646
>gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]
Length = 255
Score = 38.5 bits (88), Expect = 0.017
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63
SV + AF+++L +P++ +Q L++ I +Y + GF G+ + FRPGSV V
Sbjct: 44 SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 101
Query: 64 NASLVF 69
+L F
Sbjct: 102 QLTLAF 107
>gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens]
Length = 264
Score = 38.5 bits (88), Expect = 0.017
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63
SV + AF+++L +P++ +Q L++ I +Y + GF G+ + FRPGSV V
Sbjct: 53 SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 110
Query: 64 NASLVF 69
+L F
Sbjct: 111 QLTLAF 116
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 38.5 bits (88), Expect = 0.017
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 20/89 (22%)
Query: 393 PPMHLQRGETGTGGRPASNQRQVGRKQISCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPG 452
PP R ET G RP S++R + EE G PP R P KP P
Sbjct: 915 PPRRESRTETRWGPRPGSSRRGI---------------PPEEPGAPPRRAGPIKKP--PP 957
Query: 453 PNRCH---PSNVRQGWESPQTPHPSRPKV 478
P + P + QG E+P+ P P K+
Sbjct: 958 PTKVEELPPKPLEQGDETPKPPKPDPLKI 986
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 36.2 bits (82), Expect = 0.082
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--- 58
++ FTITN + + +P S K +++ L+P++ G + G + + RP
Sbjct: 13482 TINFTITNLRYEENMHHPGSRKFNTTERVLQGLLRPVFKNTSVGPLYSGCRLTLLRPKKD 13541
Query: 59 -GSVAVNASLVF--GGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLIT 115
+ V+A + ++PG +L W LS +S+T G T
Sbjct: 13542 GAATKVDAICTYRPDPKSPGLDREQLYW--------------ELSQLTHSITELGP--YT 13585
Query: 116 LARETISIRFTAMRSFLPQLLVPGS 140
L R+++ + RS +P +PG+
Sbjct: 13586 LDRDSLYVNGFTQRSSVPTTSIPGT 13610
Score = 35.0 bits (79), Expect = 0.18
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP 58
M ++ FTITN + + S K + ++ L+PL+ G + G + + RP
Sbjct: 12230 MPFTLNFTITNLQYEEDMRRTGSRKFNTMESVLQGLLKPLFKNTSVGPLYSGCRLTLLRP 12289
Query: 59 ----GSVAVNASLV--FGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDG-- 110
+ V+A ++PG + +L W L K+ LG +L NSL +G
Sbjct: 12290 EKDGAATGVDAICTHRLDPKSPGLNREQLYWEL-SKLTNDIEELGPYTLDRNSLYVNGFT 12348
Query: 111 -----ADLITLARETISIRFTAMRSFLPQ--------LLVPGSVSFVLLERQ 149
+ T T+ +R + S L LLVP +++F + Q
Sbjct: 12349 HQSSVSTTSTPGTSTVDLRTSGTPSSLSSPTIMAAGPLLVPFTLNFTITNLQ 12400
Score = 35.0 bits (79), Expect = 0.18
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--G 59
++ FTITN + + +P S K +++ L P++ G + G + + RP
Sbjct: 12858 TLNFTITNLQYEEDMHHPGSRKFNTTERVLQGLLGPMFKNTSVGLLYSGCRLTLLRPEKN 12917
Query: 60 SVAVNASLVFGGR----APGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDG----- 110
A + R +PG + +L W L ++ LG +L NSL +G
Sbjct: 12918 GAATGMDAICSHRLDPKSPGLNREQLYWEL-SQLTHGIKELGPYTLDRNSLYVNGFTHRS 12976
Query: 111 --ADLITLARETISIRFTAMRSFLPQ------LLVPGSVSFVLLERQ 149
A T T+ + + S LP LLVP +++F + Q
Sbjct: 12977 SVAPTSTPGTSTVDLGTSGTPSSLPSPTTAVPLLVPFTLNFTITNLQ 13023
Score = 35.0 bits (79), Expect = 0.18
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 24/145 (16%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--G 59
++ FTITN + + +P S K + ++ L+PL+ G + G + + RP
Sbjct: 13170 TLNFTITNLQYEENMGHPGSRKFNITESVLQGLLKPLFKSTSVGPLYSGCRLTLLRPEKD 13229
Query: 60 SVAVNASLVFGGR----APGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLIT 115
VA + R PG +L W LS +S+T G T
Sbjct: 13230 GVATRVDAICTHRPDPKIPGLDRQQLYW--------------ELSQLTHSITELGP--YT 13273
Query: 116 LARETISIRFTAMRSFLPQLLVPGS 140
L R+++ + RS +P PG+
Sbjct: 13274 LDRDSLYVNGFTQRSSVPTTSTPGT 13298
Score = 31.6 bits (70), Expect = 2.0
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--- 58
++ FTITN + + +P S K +++ L PL+ + G + G ++ R
Sbjct: 13014 TLNFTITNLQYGEDMRHPGSRKFNTTERVLQGLLGPLFKNSSVGPLYSGCRLISLRSEKD 13073
Query: 59 -GSVAVNASLV--FGGRAPGPSPCELLWALYRKVKTSG-HMLGNLSLAENSL-------T 107
+ V+A ++PG +L W L + T+G LG +L NSL
Sbjct: 13074 GAATGVDAICTHHLNPQSPGLDREQLYWQLSQ--MTNGIKELGPYTLDRNSLYVNGFTHR 13131
Query: 108 SDGADLITLARETISIRFTAMRSFLPQ------LLVPGSVSFVLLERQ 149
S G T T+ + + S +P LLVP +++F + Q
Sbjct: 13132 SSGLTTSTPWTSTVDLGTSGTPSPVPSPTTTGPLLVPFTLNFTITNLQ 13179
Score = 30.4 bits (67), Expect = 4.5
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 22/167 (13%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--- 58
++ FTITN + + P S K +++ L P++ G + G + + R
Sbjct: 12702 TLNFTITNLKYEEDMHCPGSRKFNTTERVLQSLLGPMFKNTSVGPLYSGCRLTLLRSEKD 12761
Query: 59 -GSVAVNASLV--FGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDG----- 110
+ V+A ++PG +L W L ++ LG +L NSL +G
Sbjct: 12762 GAATGVDAICTHRLDPKSPGVDREQLYWEL-SQLTNGIKELGPYTLDRNSLYVNGFTHQT 12820
Query: 111 --ADLITLARETISIRFTAMRSFLPQ------LLVPGSVSFVLLERQ 149
+ T T+ + + S LP LLVP +++F + Q
Sbjct: 12821 SAPNTSTPGTSTVDLGTSGTPSSLPSPTSAGPLLVPFTLNFTITNLQ 12867
Score = 30.4 bits (67), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSV 61
++ FTI N + A + P S K + ++ H L PL+ + G + G V SV
Sbjct: 13927 TLNFTINNLRYMADMGQPGSLKFNITDNVMQHLLSPLFQRSSLGARYTGCRVIALRSV 13984
>gi|239757138 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 959
Score = 36.2 bits (82), Expect = 0.082
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG--FQGIGVLVFRP--- 58
++ FTITN + + +P S K +++ L+P++ G + G + + RP
Sbjct: 169 TINFTITNLRYEENMHHPGSRKFNTTERVLQGLLRPVFKNTSVGPLYSGCRLTLLRPKKD 228
Query: 59 -GSVAVNASLVF--GGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLIT 115
+ V+A + ++PG +L W LS +S+T G T
Sbjct: 229 GAATKVDAICTYRPDPKSPGLDREQLYW--------------ELSQLTHSITELGP--YT 272
Query: 116 LARETISIRFTAMRSFLPQLLVPGS 140
L R+++ + RS +P +PG+
Sbjct: 273 LDRDSLYVNGFTQRSSVPTTSIPGT 297
Score = 30.4 bits (67), Expect = 4.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSV 61
++ FTI N + A + P S K + ++ H L PL+ + G + G V SV
Sbjct: 396 TLNFTINNLRYMADMGQPGSLKFNITDNVMQHLLSPLFQRSSLGARYTGCRVIALRSV 453
>gi|239751012 PREDICTED: similar to hCG2041351 [Homo sapiens]
Length = 186
Score = 35.8 bits (81), Expect = 0.11
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 393 PPMHLQRGETGTGGRPASNQRQVGRKQISCLTFLSCLPQAEEKGQPP------IRPLPTL 446
P M Q + G+ GR A QR + LT L PQ QPP ++ P
Sbjct: 37 PGMGQQPLQPGSPGRGAGRQRASRQPPCGALTSLQAAPQ-----QPPGSAHTSLQGSPLA 91
Query: 447 KPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVP 480
L P P + + R G+ P +P P +P P
Sbjct: 92 LHLPPPPRGVNCAVCRPGYADPGSPGPQQPDEEP 125
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.41
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 429 LPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVPIPH 483
LPQ E +G PP P P L P PG P V P HP+ P P PH
Sbjct: 415 LPQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPT-PSTAPGPH 466
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.41
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 429 LPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVPIPH 483
LPQ E +G PP P P L P PG P V P HP+ P P PH
Sbjct: 415 LPQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPT-PSTAPGPH 466
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.41
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 429 LPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVPIPH 483
LPQ E +G PP P P L P PG P V P HP+ P P PH
Sbjct: 415 LPQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPT-PSTAPGPH 466
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.9 bits (76), Expect = 0.41
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 429 LPQAEEKGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVPIPH 483
LPQ E +G PP P P L P PG P V P HP+ P P PH
Sbjct: 415 LPQGEVQGLPPPPPPPPLPP--PGIRPSSPVTVTALAHPPSGLHPT-PSTAPGPH 466
>gi|157168349 F-box and leucine-rich repeat protein 19 [Homo
sapiens]
Length = 694
Score = 33.9 bits (76), Expect = 0.41
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 398 QRGETGTGGRPASNQRQV--GRKQ-ISCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPN 454
+R E G P + +++V GR++ + + +CL + + G P + P L P + +
Sbjct: 213 KRKEREAGNEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPPRVLNPSQAFSS 272
Query: 455 RCHPSNVRQGWESPQTPHPS-RPKVVPIPHQKESEL 489
CHP + WE P+ P S VP P + +L
Sbjct: 273 -CHPGLPPENWEKPKPPLASAEGPAVPSPSPQREKL 307
>gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3
preproprotein [Homo sapiens]
Length = 839
Score = 33.5 bits (75), Expect = 0.53
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 29/152 (19%)
Query: 358 SPLDASIPCYAVALLILGLLLVTLALVLEI-------------RRAVQ---PPMHLQRGE 401
+P D + A + L GLLL L L++ + +R Q P + +
Sbjct: 680 APPDCTTQLKATSSLTTGLLLSLLVLLVLVMLGASYWYRARLHQRLCQLKGPTCQYRAAQ 739
Query: 402 TGTGGRPASNQRQV---GRKQISCLTF-------LSCLPQAEE-KGQPPIRPLPTLKPLK 450
+G RP QR + G KQ S L+F L P ++ + Q P +P P KPL
Sbjct: 740 SGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRLQSQGPAKPPPPRKPLP 799
Query: 451 PGP-NRCHPSNV-RQGWESPQTPHPSRPKVVP 480
P RC ++ G P PSRP P
Sbjct: 800 ADPQGRCPSGDLPGPGAGIPPLVVPSRPAPPP 831
>gi|61743940 G-protein coupled receptor 110 isoform 1 [Homo sapiens]
Length = 910
Score = 33.5 bits (75), Expect = 0.53
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 6 TFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNA 65
TF I NE F+ LLN +S + I QL+ Y E GF+ + V FR GS+
Sbjct: 155 TFKI-NERFTNDLLNSSSAIYSKYANGIEIQLKKAY-ERIQGFESVQVTQFRNGSIVAGY 212
Query: 66 SLVFGGRAPGPSPCELLWAL---YRKVKTSGHML 96
+V S ELL A+ K KT+ H L
Sbjct: 213 EVV-----GSSSASELLSAIEHVAEKAKTALHKL 241
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 33.1 bits (74), Expect = 0.70
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 17/111 (15%)
Query: 392 QPPMHLQRGETGTGGRPASNQRQVGRKQISCLTFLSCLPQAEEKGQPPIRPLPTLK---- 447
QPP L E S Q Q+ +Q+ +K QPP LP++K
Sbjct: 907 QPPQVLLEDEEPPAPPLTSMQMQLYLQQL-------------QKVQPPTPLLPSVKVQSQ 953
Query: 448 PLKPGPNRCHPSNVRQGWESPQTPHPSRPKVVPIPHQKESELFYGAQPARF 498
P P P HPS +Q + P P P +P+ P + QP +F
Sbjct: 954 PPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQF 1004
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.70
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 143 FVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQWVGVYIEYKF 189
F LL + ILQ PVV G + P E+P N +Q V +++YKF
Sbjct: 202 FKLLRKCILQMTRPVVEGSLGSPPFEKP-----NIEQGVLNFVQYKF 243
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 429 LPQAEEKGQPP-IRPLPTLKPLKPGPNRCHPSNV----RQGWESPQTPHPSRPKVVPIPH 483
+P + GQ P + LPT PL+P P H S+ Q W + P+ VP+
Sbjct: 496 IPGQQHPGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQ 555
Query: 484 QKESELF 490
SE F
Sbjct: 556 HSPSEPF 562
>gi|71043876 undifferentiated embryonic cell transcription factor 1
[Homo sapiens]
Length = 341
Score = 32.3 bits (72), Expect = 1.2
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 27/135 (20%)
Query: 372 LILGLLL---VTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQISCLTFLSC 428
L+LG LL V AL+L+ R+A+ + A Q+QV R C
Sbjct: 70 LLLGTLLQPAVWRALLLDRRQALPTYRRVSA---------ALAQQQVRRTPAQCRRRYKF 120
Query: 429 LPQA--EEKGQPP------IRPLPTL-------KPLKPGPNRCHPSNVRQGWESPQTPHP 473
L E GQPP IR L L +P + P P R+ + P P
Sbjct: 121 LKDKFREAHGQPPGPFDEQIRKLMGLLGDNGRKRPRRRSPGSGRPQRARRPVPNAHAPAP 180
Query: 474 SRPKVVPIPHQKESE 488
S P P+P ++ +
Sbjct: 181 SEPDATPLPTARDRD 195
>gi|51988914 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 330 GLHTLGKAEGLLVEMVIPDLGTPSPEVSSPLDA-SIPCYAVALLILGLLLVTLALVLEIR 388
G +T+G + V+PD P P V+S A S+P V + G + + L+L +
Sbjct: 340 GANTMGYSFRSAFLTVLPDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLC 399
Query: 389 RAVQPPMHLQRGETGTGGRPASNQR-QVGRKQISCLTFLSCLP---QAEEKGQP 438
+A + P G RP R + G K + L LS P EE G P
Sbjct: 400 QAQKKPCTPAPAPPLPGHRPPGTARDRSGDKDLPSLAALSAGPGVGLCEEHGSP 453
>gi|51988910 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 330 GLHTLGKAEGLLVEMVIPDLGTPSPEVSSPLDA-SIPCYAVALLILGLLLVTLALVLEIR 388
G +T+G + V+PD P P V+S A S+P V + G + + L+L +
Sbjct: 340 GANTMGYSFRSAFLTVLPDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLC 399
Query: 389 RAVQPPMHLQRGETGTGGRPASNQR-QVGRKQISCLTFLSCLP---QAEEKGQP 438
+A + P G RP R + G K + L LS P EE G P
Sbjct: 400 QAQKKPCTPAPAPPLPGHRPPGTARDRSGDKDLPSLAALSAGPGVGLCEEHGSP 453
>gi|51988912 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 330 GLHTLGKAEGLLVEMVIPDLGTPSPEVSSPLDA-SIPCYAVALLILGLLLVTLALVLEIR 388
G +T+G + V+PD P P V+S A S+P V + G + + L+L +
Sbjct: 340 GANTMGYSFRSAFLTVLPDPKPPGPPVASSSSATSLPWPVVIGIPAGAVFILGTLLLWLC 399
Query: 389 RAVQPPMHLQRGETGTGGRPASNQR-QVGRKQISCLTFLSCLP---QAEEKGQP 438
+A + P G RP R + G K + L LS P EE G P
Sbjct: 400 QAQKKPCTPAPAPPLPGHRPPGTARDRSGDKDLPSLAALSAGPGVGLCEEHGSP 453
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 435 KGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESP---QTPHPSRP 476
K QPP RP P + P P+ PS V G +P QTP + P
Sbjct: 756 KPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPP 800
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 435 KGQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESP---QTPHPSRP 476
K QPP RP P + P P+ PS V G +P QTP + P
Sbjct: 751 KPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPP 795
>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 31.2 bits (69), Expect = 2.6
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
Query: 437 QPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTPHP----------SRPKVVPIPHQKE 486
+P P PT G NR HP+ + + P P P S P+ VP +
Sbjct: 44 RPSHPPRPTTSSWANGSNRQHPAELSV--QLPANPPPGLNQGCIRAASAPRWVPTLTVPQ 101
Query: 487 SELFYGAQPARFCVTWWKGLWGKPGELQLGEKEPRSHSVPTCQVT 531
+ L G+Q R C +G G+ EK+PR P C++T
Sbjct: 102 ATLPGGSQGHRRC----RGE-GEGQRRGCVEKQPRPTPTPACELT 141
>gi|7524363 paired box 8 isoform PAX8C [Homo sapiens]
Length = 398
Score = 31.2 bits (69), Expect = 2.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 436 GQPPIRPLPTLKPLKPGPNRCHPSNVRQGWESPQTP--HPSRP-----KVVPIPHQ 484
G P P P L P G +R PS+ + W P+ P HP+ P + P+P Q
Sbjct: 312 GSRPSMPFPMLPPCT-GSSRARPSSQGERWWGPRCPDTHPTSPPADRAAMPPLPSQ 366
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,986,981
Number of Sequences: 37866
Number of extensions: 1336142
Number of successful extensions: 3862
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3783
Number of HSP's gapped (non-prelim): 132
length of query: 562
length of database: 18,247,518
effective HSP length: 107
effective length of query: 455
effective length of database: 14,195,856
effective search space: 6459114480
effective search space used: 6459114480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.