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Search of human proteins with 239750785
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo
sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 746 0.0
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 746 0.0
gi|29788785 tubulin, beta [Homo sapiens] 412 e-115
gi|29788768 tubulin, beta 2B [Homo sapiens] 408 e-114
gi|4507729 tubulin, beta 2 [Homo sapiens] 407 e-114
gi|5174735 tubulin, beta, 2 [Homo sapiens] 407 e-113
gi|21361322 tubulin, beta 4 [Homo sapiens] 405 e-113
gi|50592996 tubulin, beta, 4 [Homo sapiens] 394 e-110
gi|14210536 tubulin, beta 6 [Homo sapiens] 392 e-109
gi|42558279 tubulin, beta 8 [Homo sapiens] 377 e-105
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 374 e-104
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 348 3e-96
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens] 300 1e-81
gi|14389309 tubulin alpha 6 [Homo sapiens] 135 8e-32
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 134 1e-31
gi|17986283 tubulin, alpha 1a [Homo sapiens] 132 6e-31
gi|17921989 tubulin, alpha 4a [Homo sapiens] 132 6e-31
gi|156564363 tubulin, alpha 3d [Homo sapiens] 130 2e-30
gi|17921993 tubulin, alpha 3c [Homo sapiens] 130 2e-30
gi|46409270 tubulin, alpha 3e [Homo sapiens] 127 1e-29
gi|9507215 tubulin, alpha 8 [Homo sapiens] 125 5e-29
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 124 1e-28
gi|7706751 tubulin, gamma 2 [Homo sapiens] 112 7e-25
gi|31543831 tubulin, gamma 1 [Homo sapiens] 109 4e-24
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 102 7e-22
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 102 7e-22
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 102 7e-22
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 92 6e-19
gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens] 51 1e-06
gi|50592998 delta-tubulin [Homo sapiens] 47 3e-05
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 746 bits (1926), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA 60
MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA 60
Query: 61 ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS 120
ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS
Sbjct: 61 ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS 120
Query: 121 AXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLCFPH 180
A LPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTH VSANMRGVTTFLCFPH
Sbjct: 121 AXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLCFPH 180
Query: 181 QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP 240
QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP
Sbjct: 181 QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP 240
Query: 241 GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN 300
GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN
Sbjct: 241 GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN 300
Query: 301 SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK 360
SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK
Sbjct: 301 SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK 360
Query: 361 RERTQ 365
RERTQ
Sbjct: 361 RERTQ 365
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 746 bits (1926), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA 60
MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA
Sbjct: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGDKYVPPTILVDPEPGIMDSKEA 60
Query: 61 ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS 120
ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS
Sbjct: 61 ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAEPCS 120
Query: 121 AXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLCFPH 180
A LPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTH VSANMRGVTTFLCFPH
Sbjct: 121 AXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLCFPH 180
Query: 181 QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP 240
QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP
Sbjct: 181 QLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMMAAPP 240
Query: 241 GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN 300
GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN
Sbjct: 241 GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGN 300
Query: 301 SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK 360
SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK
Sbjct: 301 SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEHRQSRTPPQK 360
Query: 361 RERTQ 365
RERTQ
Sbjct: 361 RERTQ 365
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 412 bits (1058), Expect = e-115
Identities = 244/434 (56%), Positives = 274/434 (63%), Gaps = 73/434 (16%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVHIQ G CG+QI AKFWEVISD H +D +E TG KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P ILVD EPG MDS
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KEAESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SV+PS KV TV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQVFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300
Query: 237 AA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KMAVTF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQSRTPPQKRE 362
SE++Q + + E
Sbjct: 420 SEYQQYQDATAEEE 433
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 408 bits (1048), Expect = e-114
Identities = 239/425 (56%), Positives = 271/425 (63%), Gaps = 73/425 (17%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVHIQ G CG+QI AKFWEVISD H +D +E TG+KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P ILVD EPG MDS
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KE+ESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SVMPS KV TV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQ 353
SE++Q
Sbjct: 420 SEYQQ 424
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 407 bits (1046), Expect = e-114
Identities = 238/425 (56%), Positives = 270/425 (63%), Gaps = 73/425 (17%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVHIQ G CG+QI AKFWEVISD H +D +E G+KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P ILVD EPG MDS
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KE+ESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SVMPS KV TV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQ 353
SE++Q
Sbjct: 420 SEYQQ 424
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 407 bits (1045), Expect = e-113
Identities = 239/434 (55%), Positives = 273/434 (62%), Gaps = 73/434 (16%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVH+Q G CG+QI AKFWEVISD H +D +E TG KYV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P +LVD EPG MDS
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KEAESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SV+PS KV TV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 237 AA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML+VQNK+ SSYF+EW+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKN-SSYFVEWIPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQSRTPPQKRE 362
SE++Q + + E
Sbjct: 420 SEYQQYQDATAEEE 433
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 405 bits (1040), Expect = e-113
Identities = 238/425 (56%), Positives = 269/425 (63%), Gaps = 73/425 (17%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVH+Q G CG+QI AKFWEVISD H +D +E TG YV
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P +LVD EPG MDS
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KEAESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SV+PS KV TV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 237 AA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQMLSVQ+K+ SSYF+EW+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKN-SSYFVEWIPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KMA TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQ 353
SE++Q
Sbjct: 420 SEYQQ 424
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 394 bits (1013), Expect = e-110
Identities = 233/434 (53%), Positives = 268/434 (61%), Gaps = 73/434 (16%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGD------------------KYV 42
M EIVHIQ G CG+QI AKFWEVISD H +D GD KYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P ILVD EPG MDS
Sbjct: 61 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KE E+CDCLQGFQLTHSLG GTGSGMGTLL SK+REE PD IMNT SV+PS KV TV
Sbjct: 121 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L IH LVENTDET D EA Y+I FRTL+L T Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLT+ GSQ YRALT+P+LTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 300
Query: 237 AA-PPGLPSSMNI------HPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML++Q+K+ SSYF+EW+ VK A+ DI P
Sbjct: 301 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKN-SSYFVEWIPNNVKVAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KM+ TF+GNS A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQSRTPPQKRE 362
SE++Q + + E
Sbjct: 420 SEYQQYQDATAEEE 433
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 392 bits (1007), Expect = e-109
Identities = 232/425 (54%), Positives = 263/425 (61%), Gaps = 73/425 (17%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPSEGTGD------------------KYV 42
M EIVHIQ G CG+QI KFWEVISD H +D GD KYV
Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P LVD EPG MDS
Sbjct: 61 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KE E CDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD IMNT SVMPS KV TV
Sbjct: 121 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H LVENTDET D EA Y+I FRTL+LTT Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+P+LTQQ+FDA+NMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 300
Query: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + + MKEV+EQML++Q+K+ SSYF+EW+ VK A+ DI P
Sbjct: 301 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKN-SSYFVEWIPNNVKVAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KMA TF+GNS A Q+L S+QF A+ KA LHW+ GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQ 353
SE++Q
Sbjct: 420 SEYQQ 424
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 377 bits (969), Expect = e-105
Identities = 222/437 (50%), Positives = 266/437 (60%), Gaps = 73/437 (16%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIV Q G CG+QI AKFWEVISD H++D +E +G +YV
Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P +LVD EPG MDS
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KEAESCDCLQGFQLTHSLG GTGSGMGTLL SKIREE PD I+NT S++PS KV TV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H L+EN DET D EA Y+I +TL+L T Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLTS GSQ YRALT+ +LTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + M+EV+EQM ++Q+K+ SSYF +W+ VKTA+ DI P
Sbjct: 301 AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKN-SSYFADWLPNNVKTAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G KM+ TF+GN+ A Q+L S+QF A+ KA LHWY GEGM+EMEF EAE+NMND +
Sbjct: 360 GLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
Query: 349 SEHRQSRTPPQKRERTQ 365
SE++Q + + E +
Sbjct: 420 SEYQQYQDATAEEEEDE 436
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 374 bits (960), Expect = e-104
Identities = 219/424 (51%), Positives = 257/424 (60%), Gaps = 72/424 (16%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLPS------------------EGTGDKYV 42
M E+V QTG CG+QI AKFWEVISD H++D E +G +YV
Sbjct: 1 MRELVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
+LVD EPG MDS
Sbjct: 61 SRAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCGAGNNWAKGRYTEGAELTESVMDVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
KEAESCDCLQGFQLTHSLG GTGSGMGTLL SKI EE PD I+NT S++ KV TV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSILLLPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L +H L+EN DET D EA Y+I RTL+L T Y DL H VSA M GVTT L
Sbjct: 181 EPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSATMSGVTTCL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
CFP QLN+DL KLA+N V FPRL FFM FAPLTS GSQ YRALT+ +LTQQ+FDAKNMM
Sbjct: 241 CFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM 300
Query: 237 AA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA P + M+EV+EQM ++Q+K+ SSYF +W VKTA+ DI P
Sbjct: 301 AARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKN-SSYFADWFPNNVKTAVCDIPPW 359
Query: 290 GHKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFIS 349
G KM+VTF GN+ A Q+L S+QF A KA LHWY GEGM+EMEF EAE+NMND +S
Sbjct: 360 GLKMSVTFTGNNTAVQELKRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 419
Query: 350 EHRQ 353
E++Q
Sbjct: 420 EYQQ 423
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 348 bits (894), Expect = 3e-96
Identities = 206/425 (48%), Positives = 251/425 (59%), Gaps = 73/425 (17%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP------------------SEGTGDKYV 42
M EIVHIQ G CG+QI AKFWE+I + H +DL +E G KYV
Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV 60
Query: 43 PPTILVDPEPGIMDS--------------------------------------------- 57
P +LVD EPG MDS
Sbjct: 61 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV 120
Query: 58 -KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVA 116
E+ESCDCLQGFQ+ HSLG GTGSGMGTLL +KIREE PD IMN+ SVMPS KV TV
Sbjct: 121 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV 180
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
EP +A L IH L+EN D D EA Y+I FRTL+LTT Y DL H VS M G+TT L
Sbjct: 181 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL 240
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKNMM 236
FP QLN+DL KLAVN V FPRL FFM FAPLT+ GSQ YRAL++ +LTQQ+FDA+N M
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM 300
Query: 237 AAPP-------GLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILPH 289
AA + KEV++Q+LSVQ ++ SS F+EW+ VK A+ DI P
Sbjct: 301 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRN-SSCFVEWIPNNVKVAVCDIPPR 359
Query: 290 GHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFI 348
G MA TF+GN+ A Q++ + S+ F A+ KA +HWY EGM+ EF EAENN++D +
Sbjct: 360 GLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLV 419
Query: 349 SEHRQ 353
SE++Q
Sbjct: 420 SEYQQ 424
>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
Length = 198
Score = 300 bits (768), Expect = 1e-81
Identities = 158/203 (77%), Positives = 162/203 (79%), Gaps = 11/203 (5%)
Query: 169 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 228
MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ
Sbjct: 1 MRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQ 60
Query: 229 VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWDILP 288
VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKS F + +
Sbjct: 61 VFDAKNMMAAPPGLPSSMNIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS-----H 115
Query: 289 HGHKMAVTFVGNSAATQK------LSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 342
GH + G Q+ L S QFPAVLCGKAVLHWYAGEGMNEMEFAEAEN
Sbjct: 116 VGHPSSWPQDGGHVRRQQRGHPEALHGLSGQFPAVLCGKAVLHWYAGEGMNEMEFAEAEN 175
Query: 343 NMNDFISEHRQSRTPPQKRERTQ 365
NMNDFISEHRQSRTPPQKRERTQ
Sbjct: 176 NMNDFISEHRQSRTPPQKRERTQ 198
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 135 bits (339), Expect = 8e-32
Identities = 115/428 (26%), Positives = 181/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + S+ P+ +V
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L +S + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + LT+ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGN-SAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N +A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA +M
Sbjct: 418 FSEAREDM 425
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 134 bits (338), Expect = 1e-31
Identities = 115/428 (26%), Positives = 181/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + S+ P+ +V
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L +S + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K S F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTK-RSIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA +M
Sbjct: 418 FSEAREDM 425
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 132 bits (331), Expect = 6e-31
Identities = 113/428 (26%), Positives = 180/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + S+ P+ +V
Sbjct: 121 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L + + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIATIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA +M
Sbjct: 418 FSEAREDM 425
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 132 bits (331), Expect = 6e-31
Identities = 112/428 (26%), Positives = 181/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + + G G Q+ WE+ H + +PS+ G GD K
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K ++ C LQGF + HS G GTGSG +LL ++ + S+ P+ +V
Sbjct: 121 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L +S + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K S F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVP--KDVNAAIAAIKTK-RSIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA +M
Sbjct: 418 FSEAREDM 425
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 130 bits (326), Expect = 2e-30
Identities = 111/428 (25%), Positives = 180/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + ++ P+ +V
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L + + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA ++
Sbjct: 418 FSEAREDL 425
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 130 bits (326), Expect = 2e-30
Identities = 111/428 (25%), Positives = 180/428 (42%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + ++ P+ +V
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L + + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA ++
Sbjct: 418 FSEAREDL 425
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 127 bits (320), Expect = 1e-29
Identities = 111/428 (25%), Positives = 179/428 (41%), Gaps = 87/428 (20%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMD----LPSE---GTGD-------------K 40
M E + I G G QI WE+ H + +PS+ G GD K
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 41 YVPPTILVDPEPGIMDS------------------------------------------- 57
+VP + VD EP ++D
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGKEIVDLVLD 120
Query: 58 ---KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
K A+ C LQGF + HS G GTGSG +LL ++ + ++ P+ +V
Sbjct: 121 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L + + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD-AK 233
L F LN DL + N V +PR+ F +AT+AP+ S + L++ ++T F+ A
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300
Query: 234 NMMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVP--KDVNAAIATIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNM 344
F+EA ++
Sbjct: 418 FSEAREDL 425
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 125 bits (315), Expect = 5e-29
Identities = 106/446 (23%), Positives = 182/446 (40%), Gaps = 87/446 (19%)
Query: 1 MEEIVHIQTGHCGSQISAKFWEVISDGHSMDLP--------------------SEGTGDK 40
M E + + G G QI WE+ H + SE K
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 60
Query: 41 YVPPTILVDPEPGIMDSKEA---------------------------------------- 60
+VP +++D EP ++D A
Sbjct: 61 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 120
Query: 61 ------ESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGT 114
++C LQGF + HS G GTGSG +LL ++ + ++ P+ +V
Sbjct: 121 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 180
Query: 115 VAEPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTT 174
V EP ++ L H +E++D D EA Y+I R L++ Y +L +S + +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240
Query: 175 FLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKN 234
L F LN DL + N V +PR+ F + T+AP+ S + L++ ++T F+ +
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 300
Query: 235 -MMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAM-- 283
M+ P M ++ P K+VN + +++ K + F++W T K +
Sbjct: 301 QMVKCDPRHGKYMACCMLYRGDVVP--KDVNVAIAAIKTK-RTIQFVDWCPTGFKVGINY 357
Query: 284 --WDILPHGH----KMAVTFVGNSAA-TQKLSMASQQFPAVLCGKAVLHWYAGEGMNEME 336
++P G + AV + N+ A + + +F + +A +HWY GEGM E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 337 FAEAENNMNDFISEHRQSRTPPQKRE 362
F+EA ++ ++ + T + E
Sbjct: 418 FSEAREDLAALEKDYEEVGTDSFEEE 443
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 124 bits (311), Expect = 1e-28
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
K AE C LQGF + S G GTGSG +LL ++ E SV P+ ++ V E
Sbjct: 131 KLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVE 190
Query: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLC 177
P ++ L H E+TD T D EA Y+I R L + ++ + V + +T L
Sbjct: 191 PYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLR 250
Query: 178 FPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKN-MM 236
F LN DL + N V +PR+ F M FAP+ S + ++ +T F++ N ++
Sbjct: 251 FEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLV 310
Query: 237 AAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD--- 285
P L M ++ P KEVN + + +++ S F++W T K + +
Sbjct: 311 KCDPRLGKYMACCLLYRGDVVP--KEVNAAIAATKSRH-SVQFVDWCPTGFKVGINNRPP 367
Query: 286 -ILPHG-----HKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAE 339
++P G H+ +A + + +F + +A LHWY EGM E EF E
Sbjct: 368 TVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLE 427
Query: 340 AENNM 344
A ++
Sbjct: 428 AREDL 432
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 112 bits (279), Expect = 7e-25
Identities = 103/446 (23%), Positives = 179/446 (40%), Gaps = 99/446 (22%)
Query: 3 EIVHIQTGHCGSQISAKFWEVISDGHSM-------DLPSEGTGDK-----------YVPP 44
EI+ +Q G CG+QI +FW+ + H + + +EGT K Y+P
Sbjct: 4 EIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPR 63
Query: 45 TILVDPEPGIMDS----------------------------------------------- 57
+L+D EP ++ S
Sbjct: 64 AVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIID 123
Query: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSL-KVFGTVA 116
+EA+ D L+GF L HS+ GTGSG+G+ L ++ + P ++ T SV P ++ V
Sbjct: 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPYQDEMSDVVV 183
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
+P ++ L + L +N D D A I L + ++ + VS M TT L
Sbjct: 184 QPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTL 243
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQQVFDAKNM 235
+P +N+DL L + + PRL F M + PLT+ S R T+ + +++ KN+
Sbjct: 244 RYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
Query: 236 MAAP-----------------PGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTT 278
M + G +H ++ + E+ L + F+ W +
Sbjct: 304 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKL--------ANFIPWGPAS 355
Query: 279 VKTAM---WDILPHGHKMAVTFVGNSAATQKLSMAS-QQFPAVLCGKAVLHWYAGEGMNE 334
++ A+ LP H+++ + N + L +S QQF + A L + E M +
Sbjct: 356 IQVALSRKSPYLPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLEQFRKEDMFK 415
Query: 335 MEFAEAENN---MNDFISEHRQSRTP 357
F E + + + + I E+ + P
Sbjct: 416 DNFDEMDRSREVVQELIDEYHAATQP 441
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 109 bits (272), Expect = 4e-24
Identities = 100/446 (22%), Positives = 178/446 (39%), Gaps = 99/446 (22%)
Query: 3 EIVHIQTGHCGSQISAKFWEVISDGHSM-------DLPSEGTGDK-----------YVPP 44
EI+ +Q G CG+QI +FW+ + H + + +EGT K Y+P
Sbjct: 4 EIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPR 63
Query: 45 TILVDPEPGIMDS----------------------------------------------- 57
+L+D EP ++ S
Sbjct: 64 AVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIID 123
Query: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSL-KVFGTVA 116
+EA+ D L+GF L HS+ GTGSG+G+ L ++ + P ++ T SV P+ ++ V
Sbjct: 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVV 183
Query: 117 EPCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFL 176
+P ++ L + L +N D D A I L + ++ + VS M TT L
Sbjct: 184 QPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTL 243
Query: 177 CFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGS-QLYRALTMPKLTQQVFDAKNM 235
+P +N+DL L + + PRL F M + PLT+ S R T+ + +++ KN+
Sbjct: 244 RYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNV 303
Query: 236 MAAP-----------------PGLPSSMNIHPFMKEVNEQMLSVQNKSASSYFMEWMLTT 278
M + G +H ++ + E+ L + F+ W +
Sbjct: 304 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKL--------ANFIPWGPAS 355
Query: 279 VKTAM---WDILPHGHKMAVTFVGNSAATQKL-SMASQQFPAVLCGKAVLHWYAGEGMNE 334
++ A+ LP H+++ + N + L +Q+ + +A L + E M +
Sbjct: 356 IQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFK 415
Query: 335 MEFAEAENN---MNDFISEHRQSRTP 357
F E + + + I E+ + P
Sbjct: 416 DNFDEMDTSREIVQQLIDEYHAATRP 441
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 102 bits (253), Expect = 7e-22
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Query: 220 LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFM 272
L + KLT+Q+FDAKNM+AA P + P M+EV+EQ ++QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKY-SSYFA 234
Query: 273 EWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKL---SMASQQFPAVLCGKAVLHWYAG 329
W+ V+ A DI P KM+VTF+ N+ A Q+L +QF A KA L WY+G
Sbjct: 235 HWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSG 294
Query: 330 EGMNEMEFAEAENNMNDFISEH 351
+GM+++EFAE E+NMN+ +SE+
Sbjct: 295 KGMHDVEFAEVESNMNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 102 bits (253), Expect = 7e-22
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Query: 220 LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFM 272
L + KLT+Q+FDAKNM+AA P + P M+EV+EQ ++QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKY-SSYFA 234
Query: 273 EWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKL---SMASQQFPAVLCGKAVLHWYAG 329
W+ V+ A DI P KM+VTF+ N+ A Q+L +QF A KA L WY+G
Sbjct: 235 HWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSG 294
Query: 330 EGMNEMEFAEAENNMNDFISEH 351
+GM+++EFAE E+NMN+ +SE+
Sbjct: 295 KGMHDVEFAEVESNMNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 102 bits (253), Expect = 7e-22
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Query: 220 LTMPKLTQQVFDAKNMMAA-PPGLPSSMNIHPF------MKEVNEQMLSVQNKSASSYFM 272
L + KLT+Q+FDAKNM+AA P + P M+EV+EQ ++QNK SSYF
Sbjct: 176 LEVSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKY-SSYFA 234
Query: 273 EWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKL---SMASQQFPAVLCGKAVLHWYAG 329
W+ V+ A DI P KM+VTF+ N+ A Q+L +QF A KA L WY+G
Sbjct: 235 HWIPHNVERAACDIPPLELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFLSWYSG 294
Query: 330 EGMNEMEFAEAENNMNDFISEH 351
+GM+++EFAE E+NMN+ +SE+
Sbjct: 295 KGMHDVEFAEVESNMNNLVSEY 316
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 92.4 bits (228), Expect = 6e-19
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 51/337 (15%)
Query: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
K AE CDCLQ F + HS+G GTGSG+GT L + +E P+ +S+ PS + +
Sbjct: 130 KSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGED-DVITS 188
Query: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNI---------------RFRTLELTTQN----- 157
P ++ L + L E+ D D ++ ++I + L T +
Sbjct: 189 PYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALK 248
Query: 158 ------YEDLTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTS 211
++ + + V+ + +T+ F LN DL ++++N V FP+L + +++ PL +
Sbjct: 249 KQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYT 308
Query: 212 CGSQLYRALTMPKLTQQVF-------------DAKNMMAAPPGLPSSMNIHPFMKEVNEQ 258
L P+ Q+F D K+ + L N+ ++++
Sbjct: 309 ----LTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV-----QISDL 359
Query: 259 MLSVQNKSASSYFMEWMLTTVKTAMWDILPHGHKMAVTFVGNSAATQKLSM-ASQQFPAV 317
+++ S F+ W KT++ + P GH ++ + N+ + M ++F +
Sbjct: 360 RRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRL 419
Query: 318 LCGKAVLHWYAG-EGMNEMEFAEAENNMNDFISEHRQ 353
KA LH Y EGM E F EA ++++ I E+ Q
Sbjct: 420 YKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQ 456
>gi|239753637 PREDICTED: similar to hCG1642465 [Homo sapiens]
Length = 83
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 293 MAVTFVGNSAATQKLSMASQ-QFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDFISEH 351
M+ TF+ N+ A +L F A+ K L WY GEG +E+EF EAE++MN+ +S++
Sbjct: 1 MSATFISNNTAIHELFRCILGPFMAMFRCKDFLQWYLGEGKDEIEFTEAESSMNNLVSKY 60
Query: 352 RQSRTPPQKRE 362
++ + K E
Sbjct: 61 QEHQDAMAKEE 71
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 47.0 bits (110), Expect = 3e-05
Identities = 68/364 (18%), Positives = 135/364 (37%), Gaps = 44/364 (12%)
Query: 28 HSMDLPSEGTGDKYVPPTILVDP--EPGIMD--SKEAESCDCLQGFQLTHSLGEGTGSGM 83
H+ +G+G+ + + P E IM+ KE E CD GF + S+ GTGSG+
Sbjct: 91 HACFCQKQGSGNNWAYGYSVHGPRHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGL 150
Query: 84 GTLLHSKIREEDPDHIMNTSSVMPSLKVFGT---VAEPCSAXLPIHPLVENTDETCGTDI 140
G + + ++ + + + P +GT + + ++ L + L ++D +
Sbjct: 151 GAFVTQNLEDQYSNSLKMNQIIWP----YGTGEVIVQNYNSILTLSHLYRSSDALLLHEN 206
Query: 141 EAPYNIRFRTLELTTQNYED----LTHXVSANMRGVTTFLCFPHQLNSDLCKLAVNTVSF 196
+A + I + + + ++ D L H + + + + H + L L + V
Sbjct: 207 DAIHKICAKLMNIKQISFSDINQVLAHQLGSVFQPTYSAESSFHYRRNPLGDLMEHLVPH 266
Query: 197 PRLQFFMATFAPLTSCGSQLYRALT----MPKLTQQVFDAKNMMAA------PP--GLP- 243
P + P S S Y T + L Q + M PP GLP
Sbjct: 267 PEFKMLSVRNIPHMSENSLAYTTFTWAGLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPP 326
Query: 244 -SSMNIHP------------FMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD---IL 287
S M+++ ++ + Q V+ + + W+ +W
Sbjct: 327 LSKMSLNKDLHFNTSIANLVILRGKDVQSADVEGFKDPALYTSWLKPVNAFNVWKTQRAF 386
Query: 288 PHGHKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAEAENNMNDF 347
K AV + + L M + + KA +H Y G+ E +F ++ ++
Sbjct: 387 SKYEKSAVLVSNSQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQV 446
Query: 348 ISEH 351
++ +
Sbjct: 447 VASY 450
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,467,431
Number of Sequences: 37866
Number of extensions: 630299
Number of successful extensions: 1540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1406
Number of HSP's gapped (non-prelim): 71
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.