Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RBM44 Sequence: fasta or formatted (1052aa) NCBI GI: 207028821
Description:

RNA binding motif protein 44

Referenced in:

RNA-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         46           2
 C cysteine            2.0         21           2
 D aspartate           6.7         71           3
 E glutamate           7.8         82           2
 F phenylalanine       3.1         33           2
 G glycine             4.1         43           2
 H histidine           2.6         27           1
 I isoleucine          4.8         50           2
 K lysine              8.5         89           2
 L leucine             8.9         94           3
 M methionine          2.1         22           2
 N asparagine          6.7         70           2
 P proline             3.3         35           2
 Q glutamine           4.9         52           2
 R arginine            3.2         34           2
 S serine             12.5        131           2
 T threonine           6.2         65           2
 V valine              5.0         53           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.6         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA binding motif protein 44 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
KIF21A                0.008   kinesin family member 21A 
RBM22                 0.008   RNA binding motif protein 22 
RBM46                 0.007   RNA binding motif protein 46 
RBMY1F                0.007   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1J                0.007   RNA binding motif protein, Y-linked, family 1, membe...
TRA2B                 0.007   splicing factor, arginine/serine-rich 10 
RBMY1A1               0.007   RNA binding motif protein, Y-linked, family 1, member...
RBMY1E                0.007   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1B                0.007   RNA binding motif protein, Y-linked, family 1, membe...
RBMY1D                0.007   RNA binding motif protein, Y-linked, family 1, membe...
RBM14                 0.007   RNA binding motif protein 14 
PABPC3                0.007   poly(A) binding protein, cytoplasmic 3 
ROCK1                 0.007   Rho-associated, coiled-coil containing protein kinase...
NEB                   0.007   nebulin 
ZEB1                  0.006   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.006   zinc finger E-box binding homeobox 1 isoform b [Hom...
SMC2                  0.006   structural maintenance of chromosomes 2 
SMC2                  0.006   structural maintenance of chromosomes 2 
SMC2                  0.006   structural maintenance of chromosomes 2 
RBMXL2                0.006   testes-specific heterogenous nuclear ribonucleoprot...
HTATSF1               0.006   HIV-1 Tat specific factor 1 
HTATSF1               0.006   HIV-1 Tat specific factor 1 
RBMXL1                0.006   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.006   RNA binding motif protein, X-linked-like 1 
LOC100288788          0.006   PREDICTED: similar to RNA binding motif protein, X-...
LOC100288788          0.006   PREDICTED: hypothetical protein XP_002343863 
CIRBP                 0.006   cold inducible RNA binding protein 
TRA2A                 0.006   transformer-2 alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press