Guide to the Human Genome
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Search of human proteins with 239749933

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo
sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo ...   370   e-103
gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo ...   370   e-103
gi|239755452 PREDICTED: hypothetical protein [Homo sapiens]           365   e-102
gi|5902106 SRY-box 15 [Homo sapiens]                                   33   0.092
gi|239757105 PREDICTED: hypothetical protein [Homo sapiens]            32   0.27 
gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo ...    32   0.27 
gi|22027509 cell division cycle associated 4 [Homo sapiens]            31   0.46 
gi|22027511 cell division cycle associated 4 [Homo sapiens]            31   0.46 
gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]    30   0.78 
gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type...    30   1.0  
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    30   1.3  
gi|71361688 myeloblastin [Homo sapiens]                                29   1.7  
gi|30425464 transmembrane protein 105 [Homo sapiens]                   29   1.7  
gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Ho...    29   2.3  
gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]            28   3.0  
gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ...    28   3.0  
gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ...    28   3.0  
gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]              28   3.0  
gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]    28   3.9  
gi|19743898 receptor tyrosine kinase-like orphan receptor 2 prec...    28   3.9  
gi|124378039 SEC16 homolog A [Homo sapiens]                            28   3.9  
gi|239744563 PREDICTED: hypothetical protein XP_002343195 [Homo ...    28   3.9  
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi...    28   5.0  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    28   5.0  
gi|117606370 UMP-CMP kinase 2 [Homo sapiens]                           28   5.0  
gi|46409442 hypothetical protein LOC389197 [Homo sapiens]              28   5.0  
gi|22538453 phosphatidylinositol glycan anchor biosynthesis, cla...    27   6.6  
gi|145275213 coagulation factor XII precursor [Homo sapiens]           27   8.6  
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]         27   8.6  
gi|24797153 faciogenital dysplasia protein [Homo sapiens]              27   8.6  

>gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo
           sapiens]
          Length = 171

 Score =  370 bits (950), Expect = e-103
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60
           MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA
Sbjct: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60

Query: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120
           TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP
Sbjct: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120

Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171
           RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP
Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171


>gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo
           sapiens]
          Length = 171

 Score =  370 bits (950), Expect = e-103
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60
           MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA
Sbjct: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60

Query: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120
           TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP
Sbjct: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120

Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171
           RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP
Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171


>gi|239755452 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 171

 Score =  365 bits (938), Expect = e-102
 Identities = 170/171 (99%), Positives = 170/171 (99%)

Query: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60
           MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA
Sbjct: 1   MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60

Query: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120
           TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAH CQEVP
Sbjct: 61  TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHRCQEVP 120

Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171
           RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP
Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 33.5 bits (75), Expect = 0.092
 Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 79  PELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQVWGCWCP 138
           P  GPG   ++     G +    S A L  S  ++HC  E P P  L     ++ G   P
Sbjct: 146 PLWGPGYATTQPSRGFGYRPPSYSTAYLPGSYGSSHCKLEAPSPCSLPQSDPRLQGELLP 205

Query: 139 QHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171
            + + L  PPG          P PY  P    P
Sbjct: 206 TYTHYL--PPG---------SPTPYNPPLAGAP 227


>gi|239757105 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 152

 Score = 32.0 bits (71), Expect = 0.27
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 52  GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111
           GT       + G A L   HHV          GLC     +   L++Q LS +GL     
Sbjct: 19  GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78

Query: 112 AAHCCQEV--PRP--SLLTFPKGQV 132
            A C  E+  PRP  +L TF  G V
Sbjct: 79  PAPCAPEMQSPRPPRTLHTFRPGSV 103


>gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo
           sapiens]
          Length = 152

 Score = 32.0 bits (71), Expect = 0.27
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 52  GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111
           GT       + G A L   HHV          GLC     +   L++Q LS +GL     
Sbjct: 19  GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78

Query: 112 AAHCCQEV--PRP--SLLTFPKGQV 132
            A C  E+  PRP  +L TF  G V
Sbjct: 79  PAPCAPEMQSPRPPRTLHTFRPGSV 103


>gi|22027509 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 31.2 bits (69), Expect = 0.46
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 21  VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73
           VAP A   AP+     TE +   +WG        GLG G  Q        +   Q P H+
Sbjct: 82  VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141

Query: 74  QATFYPELGP 83
           Q++ +   GP
Sbjct: 142 QSSAWEMDGP 151


>gi|22027511 cell division cycle associated 4 [Homo sapiens]
          Length = 241

 Score = 31.2 bits (69), Expect = 0.46
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 21  VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73
           VAP A   AP+     TE +   +WG        GLG G  Q        +   Q P H+
Sbjct: 82  VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141

Query: 74  QATFYPELGP 83
           Q++ +   GP
Sbjct: 142 QSSAWEMDGP 151


>gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens]
          Length = 4861

 Score = 30.4 bits (67), Expect = 0.78
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 34   APRTEAMADVSWGLG---LGQGTEQVVE----GATQGLAQLQGPHHVQATFYPELGPGLC 86
            +P   + + VSW +    L    E++V        +GL  +Q PH V A  +PE GP   
Sbjct: 3483 SPSDPSFSPVSWSISGKYLAGALEKMVNIWQVNGGKGLVDIQ-PHWVSALAWPEEGPATA 3541

Query: 87   VSRIQSSPGLQLQGLSEAGLSL 108
             S    SP L L G  +  L L
Sbjct: 3542 WS--GESPELLLVGRMDGSLGL 3561


>gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type
           motif 19 [Homo sapiens]
          Length = 375

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 147 PPGLLRGEGVAIQPPPYRAPWK 168
           PPG   G G+A++PPP  A W+
Sbjct: 147 PPGPAPGPGLALEPPPGLASWR 168


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 23   PVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGP 70
            P A L AP G AP T A A  + G G    TE     A++  A  +GP
Sbjct: 2264 PAASLCAPDGPAPNTVAQAQAADGAGPEDDTE-----ASRAAAPAEGP 2306


>gi|71361688 myeloblastin [Homo sapiens]
          Length = 256

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 56  VVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHC 115
           ++ GA +  A++ G H  Q    P   P +   +++ +PG    G +    S  L AAHC
Sbjct: 18  LLSGAARA-AEIVGGHEAQ----PHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHC 72

Query: 116 CQEVPR 121
            +++P+
Sbjct: 73  LRDIPQ 78


>gi|30425464 transmembrane protein 105 [Homo sapiens]
          Length = 129

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 12/49 (24%)

Query: 127 FPKGQVWGCWCPQHVYLLLW--------PPGLLRGEGVAIQPPPYRAPW 167
           F  G V G    Q +YLL W        PP LL+G   + Q  P R+PW
Sbjct: 21  FRAGNVIG----QLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPW 65


>gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Homo
           sapiens]
          Length = 569

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 18/50 (36%), Positives = 23/50 (46%)

Query: 50  GQGTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQ 99
           G   EQ+   A QG  Q QG      +  PEL   LC +R ++   LQ Q
Sbjct: 386 GLRAEQLPSSAPQGSQQEQGEEESLPSSVPELQQLLCCTRQEARARLQAQ 435


>gi|239756833 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 46  GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94
           G+GLG+G      G  +GLA  Q P   Q        L P L +  +QS P
Sbjct: 133 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 183


>gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo
           sapiens]
          Length = 346

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 46  GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94
           G+GLG+G      G  +GLA  Q P   Q        L P L +  +QS P
Sbjct: 198 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 248


>gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo
           sapiens]
          Length = 346

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 46  GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94
           G+GLG+G      G  +GLA  Q P   Q        L P L +  +QS P
Sbjct: 198 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 248


>gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
          Length = 478

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 26/74 (35%)

Query: 79  PELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRP--------------SL 124
           P LGPGL        PGL     S    + +L AA     VP P              SL
Sbjct: 13  PLLGPGL-------GPGLGASWRSREAAAAALPAA-----VPGPGRVYGRRWLVLLLFSL 60

Query: 125 LTFPKGQVWGCWCP 138
           L F +G VW  W P
Sbjct: 61  LAFVQGLVWNTWGP 74


>gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]
          Length = 613

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 100 GLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQV 132
           G+S+A ++  ++  +CC+E   PS  T P G V
Sbjct: 377 GISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGV 409


>gi|19743898 receptor tyrosine kinase-like orphan receptor 2
           precursor [Homo sapiens]
          Length = 943

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 5/36 (13%)

Query: 67  LQGPH--HVQATFYPELGPGLCVSRIQSSPGLQLQG 100
           LQ PH  H+ +T +PELG G    R   +PG Q++G
Sbjct: 342 LQHPHSHHLSSTDFPELGGGHAYCR---NPGGQMEG 374


>gi|124378039 SEC16 homolog A [Homo sapiens]
          Length = 2357

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%)

Query: 33   EAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQS 92
            E P  E++A  +W + L Q   Q+ EGA        G  H Q    P+  PG   S ++ 
Sbjct: 1864 EKPEEESLAAPTWLVHLQQVERQIKEGA--------GVWH-QDGALPQQCPGTPSSEMEQ 1914

Query: 93   SPGLQLQGLSEAGLSLSLAAAHCCQEVPRPS 123
               L   GLS+ G   +L  A+    VP PS
Sbjct: 1915 ---LDRPGLSQPG---ALGIANPLLAVPAPS 1939


>gi|239744563 PREDICTED: hypothetical protein XP_002343195 [Homo
           sapiens]
          Length = 302

 Score = 28.1 bits (61), Expect = 3.9
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 10/115 (8%)

Query: 4   LLCGWCWVYSAHLVPEDVAPVAFLT-APIGE----APRTEAMADVSWGLGLGQGTEQVVE 58
           +LC  C  Y  H + E+ APV  L   P+GE    A + E   D++ GL +G      +E
Sbjct: 2   VLCPHCQPYLRH-ITEETAPVEVLVGGPLGEVVPGAFQEEVGEDLADGLPVGVVLVAFLE 60

Query: 59  GATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAA 113
               GL        V   F  E G GL V  +  +   ++  L  AGL + +  A
Sbjct: 61  EDGDGLP----VGVVLVAFLEEEGDGLPVGVVLVAFPEEVVDLVAAGLLVGVVPA 111


>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
           sapiens]
          Length = 422

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 11/65 (16%)

Query: 84  GLCVSRIQS--------SPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQVWGC 135
           GL  SRIQ          PG   +  ++AG SL  A    C   P PS + F    VWG 
Sbjct: 132 GLPASRIQMWFPNRRARHPGQAARAPAQAG-SLCNAVPGACH--PAPSWVAFAHTGVWGT 188

Query: 136 WCPQH 140
             P H
Sbjct: 189 GLPPH 193


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 117  QEVPRPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYR 164
            QE  RPS L  P  Q+     P    L    PG  + +G  ++PPP R
Sbjct: 4315 QEPKRPSQLPSPSSQL-----PTEAQLPPTHPGTPKPQGPTLEPPPGR 4357


>gi|117606370 UMP-CMP kinase 2 [Homo sapiens]
          Length = 449

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%)

Query: 116 CQEVPRPSLLTF---PKGQVW 133
           CQE PRP L  F   P+GQ+W
Sbjct: 153 CQEAPRPHLGEFEADPRGQLW 173


>gi|46409442 hypothetical protein LOC389197 [Homo sapiens]
          Length = 276

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 81  LGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFP 128
           L PG C++ +   PGL  Q L E G  +   A      VP PS L  P
Sbjct: 202 LDPGTCLAAVTVEPGLPAQRLQEKG-GMPCPALQ-VDNVPAPSELLSP 247


>gi|22538453 phosphatidylinositol glycan anchor biosynthesis, class
           Q isoform 1 [Homo sapiens]
          Length = 760

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 30/149 (20%)

Query: 14  AHLVPEDV--APVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGPH 71
           AHL P  +   P A L  P+ +A        V WG  L    E+   G  + LA+L  PH
Sbjct: 521 AHLPPPQLWLPPQALLGRPVPQA--------VPWGAHLPLEAERGQAGLRELLARLAPPH 572

Query: 72  -HVQATFYP-----------ELGPGLCVSR----IQSSPGLQLQGLSEA-GLSLSLAAA- 113
            H Q +  P            L   LC          + GL++ G  +  G    LAA  
Sbjct: 573 GHSQPSALPGWHQLSWRMSCALWTLLCAPEHGRPCYHTLGLEVIGSEQMWGWPARLAALH 632

Query: 114 --HCCQEVPRPSLLTFPKGQVWGCWCPQH 140
             HC    P P+      G+     CP+H
Sbjct: 633 HWHCLPWDPLPTCCGHHGGEHSNPRCPEH 661


>gi|145275213 coagulation factor XII precursor [Homo sapiens]
          Length = 615

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 18/88 (20%)

Query: 47  LGLGQGTEQVVEGATQ---GLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSE 103
           L  GQ   + +   T+   GL  L+G H   A  Y   G   C   + +   +       
Sbjct: 357 LSCGQRLRKSLSSMTRVVGGLVALRGAHPYIAALY--WGHSFCAGSLIAPCWV------- 407

Query: 104 AGLSLSLAAAHCCQEVPRPSLLTFPKGQ 131
                 L AAHC Q+ P P  LT   GQ
Sbjct: 408 ------LTAAHCLQDRPAPEDLTVVLGQ 429


>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
          Length = 1215

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 33/118 (27%), Positives = 39/118 (33%), Gaps = 23/118 (19%)

Query: 57   VEGATQGLAQ-LQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHC 115
            V+G T    Q L  PHH      P    GL V  +Q +P              S+   H 
Sbjct: 1044 VQGRTSWQPQSLPVPHH------PACLSGLSVPLLQPTPR-------------SVRLCHL 1084

Query: 116  CQEVPRPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPY---RAPWKSG 170
                P P     P   +           L   P  LRG G A+Q PP    RA W  G
Sbjct: 1085 SLRAPLPPPFATPTSCLSQACLSSSTLSLHLSPYPLRGPGDAVQRPPTTQGRAQWGPG 1142


>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
          Length = 961

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 19/107 (17%)

Query: 30  PIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHVQATFYPELG 82
           P G +P+       S+ L       GL QG   +V+  +    Q   PH       PE G
Sbjct: 78  PCGPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPGQSLEPH-------PE-G 129

Query: 83  PGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPK 129
           P     R++S PG   +  S+    L  A     Q  P+PS L  P+
Sbjct: 130 P----QRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPR 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.481 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,565,487
Number of Sequences: 37866
Number of extensions: 444348
Number of successful extensions: 1018
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1005
Number of HSP's gapped (non-prelim): 35
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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