BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo sapiens] (171 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo ... 370 e-103 gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo ... 370 e-103 gi|239755452 PREDICTED: hypothetical protein [Homo sapiens] 365 e-102 gi|5902106 SRY-box 15 [Homo sapiens] 33 0.092 gi|239757105 PREDICTED: hypothetical protein [Homo sapiens] 32 0.27 gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo ... 32 0.27 gi|22027509 cell division cycle associated 4 [Homo sapiens] 31 0.46 gi|22027511 cell division cycle associated 4 [Homo sapiens] 31 0.46 gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens] 30 0.78 gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type... 30 1.0 gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 30 1.3 gi|71361688 myeloblastin [Homo sapiens] 29 1.7 gi|30425464 transmembrane protein 105 [Homo sapiens] 29 1.7 gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Ho... 29 2.3 gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] 28 3.0 gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo ... 28 3.0 gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo ... 28 3.0 gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] 28 3.0 gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] 28 3.9 gi|19743898 receptor tyrosine kinase-like orphan receptor 2 prec... 28 3.9 gi|124378039 SEC16 homolog A [Homo sapiens] 28 3.9 gi|239744563 PREDICTED: hypothetical protein XP_002343195 [Homo ... 28 3.9 gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 28 5.0 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 28 5.0 gi|117606370 UMP-CMP kinase 2 [Homo sapiens] 28 5.0 gi|46409442 hypothetical protein LOC389197 [Homo sapiens] 28 5.0 gi|22538453 phosphatidylinositol glycan anchor biosynthesis, cla... 27 6.6 gi|145275213 coagulation factor XII precursor [Homo sapiens] 27 8.6 gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 27 8.6 gi|24797153 faciogenital dysplasia protein [Homo sapiens] 27 8.6 >gi|239749933 PREDICTED: hypothetical protein XP_002347217 [Homo sapiens] Length = 171 Score = 370 bits (950), Expect = e-103 Identities = 171/171 (100%), Positives = 171/171 (100%) Query: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA Sbjct: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 Query: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP Sbjct: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120 Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 >gi|239744256 PREDICTED: hypothetical protein XP_002343085 [Homo sapiens] Length = 171 Score = 370 bits (950), Expect = e-103 Identities = 171/171 (100%), Positives = 171/171 (100%) Query: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA Sbjct: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 Query: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP Sbjct: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120 Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 >gi|239755452 PREDICTED: hypothetical protein [Homo sapiens] Length = 171 Score = 365 bits (938), Expect = e-102 Identities = 170/171 (99%), Positives = 170/171 (99%) Query: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA Sbjct: 1 MCRLLCGWCWVYSAHLVPEDVAPVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGA 60 Query: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVP 120 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAH CQEVP Sbjct: 61 TQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHRCQEVP 120 Query: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP Sbjct: 121 RPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 >gi|5902106 SRY-box 15 [Homo sapiens] Length = 233 Score = 33.5 bits (75), Expect = 0.092 Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 11/93 (11%) Query: 79 PELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQVWGCWCP 138 P GPG ++ G + S A L S ++HC E P P L ++ G P Sbjct: 146 PLWGPGYATTQPSRGFGYRPPSYSTAYLPGSYGSSHCKLEAPSPCSLPQSDPRLQGELLP 205 Query: 139 QHVYLLLWPPGLLRGEGVAIQPPPYRAPWKSGP 171 + + L PPG P PY P P Sbjct: 206 TYTHYL--PPG---------SPTPYNPPLAGAP 227 >gi|239757105 PREDICTED: hypothetical protein [Homo sapiens] Length = 152 Score = 32.0 bits (71), Expect = 0.27 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 52 GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111 GT + G A L HHV GLC + L++Q LS +GL Sbjct: 19 GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78 Query: 112 AAHCCQEV--PRP--SLLTFPKGQV 132 A C E+ PRP +L TF G V Sbjct: 79 PAPCAPEMQSPRPPRTLHTFRPGSV 103 >gi|239751611 PREDICTED: hypothetical protein XP_002347929 [Homo sapiens] Length = 152 Score = 32.0 bits (71), Expect = 0.27 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Query: 52 GTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLA 111 GT + G A L HHV GLC + L++Q LS +GL Sbjct: 19 GTGNAKSEPSPGSAHLPTLHHVHQKCKVGDLSGLCTPSGLALSALEMQSLSLSGLCTPSR 78 Query: 112 AAHCCQEV--PRP--SLLTFPKGQV 132 A C E+ PRP +L TF G V Sbjct: 79 PAPCAPEMQSPRPPRTLHTFRPGSV 103 >gi|22027509 cell division cycle associated 4 [Homo sapiens] Length = 241 Score = 31.2 bits (69), Expect = 0.46 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 21 VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73 VAP A AP+ TE + +WG GLG G Q + Q P H+ Sbjct: 82 VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141 Query: 74 QATFYPELGP 83 Q++ + GP Sbjct: 142 QSSAWEMDGP 151 >gi|22027511 cell division cycle associated 4 [Homo sapiens] Length = 241 Score = 31.2 bits (69), Expect = 0.46 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 21 VAPVAFLTAPIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHV 73 VAP A AP+ TE + +WG GLG G Q + Q P H+ Sbjct: 82 VAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHL 141 Query: 74 QATFYPELGP 83 Q++ + GP Sbjct: 142 QSSAWEMDGP 151 >gi|126131099 guanine nucleotide exchange factor p532 [Homo sapiens] Length = 4861 Score = 30.4 bits (67), Expect = 0.78 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 10/82 (12%) Query: 34 APRTEAMADVSWGLG---LGQGTEQVVE----GATQGLAQLQGPHHVQATFYPELGPGLC 86 +P + + VSW + L E++V +GL +Q PH V A +PE GP Sbjct: 3483 SPSDPSFSPVSWSISGKYLAGALEKMVNIWQVNGGKGLVDIQ-PHWVSALAWPEEGPATA 3541 Query: 87 VSRIQSSPGLQLQGLSEAGLSL 108 S SP L L G + L L Sbjct: 3542 WS--GESPELLLVGRMDGSLGL 3561 >gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type motif 19 [Homo sapiens] Length = 375 Score = 30.0 bits (66), Expect = 1.0 Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 147 PPGLLRGEGVAIQPPPYRAPWK 168 PPG G G+A++PPP A W+ Sbjct: 147 PPGPAPGPGLALEPPPGLASWR 168 >gi|56676397 ankyrin repeat domain 11 [Homo sapiens] Length = 2663 Score = 29.6 bits (65), Expect = 1.3 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 23 PVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGP 70 P A L AP G AP T A A + G G TE A++ A +GP Sbjct: 2264 PAASLCAPDGPAPNTVAQAQAADGAGPEDDTE-----ASRAAAPAEGP 2306 >gi|71361688 myeloblastin [Homo sapiens] Length = 256 Score = 29.3 bits (64), Expect = 1.7 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 56 VVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHC 115 ++ GA + A++ G H Q P P + +++ +PG G + S L AAHC Sbjct: 18 LLSGAARA-AEIVGGHEAQ----PHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHC 72 Query: 116 CQEVPR 121 +++P+ Sbjct: 73 LRDIPQ 78 >gi|30425464 transmembrane protein 105 [Homo sapiens] Length = 129 Score = 29.3 bits (64), Expect = 1.7 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 12/49 (24%) Query: 127 FPKGQVWGCWCPQHVYLLLW--------PPGLLRGEGVAIQPPPYRAPW 167 F G V G Q +YLL W PP LL+G + Q P R+PW Sbjct: 21 FRAGNVIG----QLIYLLTWSLFTAWLRPPTLLQGPRTSPQGSPPRSPW 65 >gi|117956403 rabaptin, RAB GTPase binding effector protein 2 [Homo sapiens] Length = 569 Score = 28.9 bits (63), Expect = 2.3 Identities = 18/50 (36%), Positives = 23/50 (46%) Query: 50 GQGTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQ 99 G EQ+ A QG Q QG + PEL LC +R ++ LQ Q Sbjct: 386 GLRAEQLPSSAPQGSQQEQGEEESLPSSVPELQQLLCCTRQEARARLQAQ 435 >gi|239756833 PREDICTED: hypothetical protein [Homo sapiens] Length = 281 Score = 28.5 bits (62), Expect = 3.0 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 46 GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94 G+GLG+G G +GLA Q P Q L P L + +QS P Sbjct: 133 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 183 >gi|239751318 PREDICTED: hypothetical protein XP_002347804 [Homo sapiens] Length = 346 Score = 28.5 bits (62), Expect = 3.0 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 46 GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94 G+GLG+G G +GLA Q P Q L P L + +QS P Sbjct: 198 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 248 >gi|239745817 PREDICTED: hypothetical protein XP_002343597 [Homo sapiens] Length = 346 Score = 28.5 bits (62), Expect = 3.0 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 46 GLGLGQGTEQVVEGATQGLAQLQGPHHVQATFY--PELGPGLCVSRIQSSP 94 G+GLG+G G +GLA Q P Q L P L + +QS P Sbjct: 198 GIGLGRGRGAAAVGVAEGLAVAQEPVQPQRRLQVARALAPALSLVLLQSVP 248 >gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] Length = 478 Score = 28.5 bits (62), Expect = 3.0 Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 26/74 (35%) Query: 79 PELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRP--------------SL 124 P LGPGL PGL S + +L AA VP P SL Sbjct: 13 PLLGPGL-------GPGLGASWRSREAAAAALPAA-----VPGPGRVYGRRWLVLLLFSL 60 Query: 125 LTFPKGQVWGCWCP 138 L F +G VW W P Sbjct: 61 LAFVQGLVWNTWGP 74 >gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] Length = 613 Score = 28.1 bits (61), Expect = 3.9 Identities = 12/33 (36%), Positives = 20/33 (60%) Query: 100 GLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQV 132 G+S+A ++ ++ +CC+E PS T P G V Sbjct: 377 GISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGV 409 >gi|19743898 receptor tyrosine kinase-like orphan receptor 2 precursor [Homo sapiens] Length = 943 Score = 28.1 bits (61), Expect = 3.9 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 5/36 (13%) Query: 67 LQGPH--HVQATFYPELGPGLCVSRIQSSPGLQLQG 100 LQ PH H+ +T +PELG G R +PG Q++G Sbjct: 342 LQHPHSHHLSSTDFPELGGGHAYCR---NPGGQMEG 374 >gi|124378039 SEC16 homolog A [Homo sapiens] Length = 2357 Score = 28.1 bits (61), Expect = 3.9 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Query: 33 EAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGPHHVQATFYPELGPGLCVSRIQS 92 E P E++A +W + L Q Q+ EGA G H Q P+ PG S ++ Sbjct: 1864 EKPEEESLAAPTWLVHLQQVERQIKEGA--------GVWH-QDGALPQQCPGTPSSEMEQ 1914 Query: 93 SPGLQLQGLSEAGLSLSLAAAHCCQEVPRPS 123 L GLS+ G +L A+ VP PS Sbjct: 1915 ---LDRPGLSQPG---ALGIANPLLAVPAPS 1939 >gi|239744563 PREDICTED: hypothetical protein XP_002343195 [Homo sapiens] Length = 302 Score = 28.1 bits (61), Expect = 3.9 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 10/115 (8%) Query: 4 LLCGWCWVYSAHLVPEDVAPVAFLT-APIGE----APRTEAMADVSWGLGLGQGTEQVVE 58 +LC C Y H + E+ APV L P+GE A + E D++ GL +G +E Sbjct: 2 VLCPHCQPYLRH-ITEETAPVEVLVGGPLGEVVPGAFQEEVGEDLADGLPVGVVLVAFLE 60 Query: 59 GATQGLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAA 113 GL V F E G GL V + + ++ L AGL + + A Sbjct: 61 EDGDGLP----VGVVLVAFLEEEGDGLPVGVVLVAFPEEVVDLVAAGLLVGVVPA 111 >gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapiens] Length = 422 Score = 27.7 bits (60), Expect = 5.0 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 11/65 (16%) Query: 84 GLCVSRIQS--------SPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPKGQVWGC 135 GL SRIQ PG + ++AG SL A C P PS + F VWG Sbjct: 132 GLPASRIQMWFPNRRARHPGQAARAPAQAG-SLCNAVPGACH--PAPSWVAFAHTGVWGT 188 Query: 136 WCPQH 140 P H Sbjct: 189 GLPPH 193 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 27.7 bits (60), Expect = 5.0 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 117 QEVPRPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPYR 164 QE RPS L P Q+ P L PG + +G ++PPP R Sbjct: 4315 QEPKRPSQLPSPSSQL-----PTEAQLPPTHPGTPKPQGPTLEPPPGR 4357 >gi|117606370 UMP-CMP kinase 2 [Homo sapiens] Length = 449 Score = 27.7 bits (60), Expect = 5.0 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%) Query: 116 CQEVPRPSLLTF---PKGQVW 133 CQE PRP L F P+GQ+W Sbjct: 153 CQEAPRPHLGEFEADPRGQLW 173 >gi|46409442 hypothetical protein LOC389197 [Homo sapiens] Length = 276 Score = 27.7 bits (60), Expect = 5.0 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 81 LGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFP 128 L PG C++ + PGL Q L E G + A VP PS L P Sbjct: 202 LDPGTCLAAVTVEPGLPAQRLQEKG-GMPCPALQ-VDNVPAPSELLSP 247 >gi|22538453 phosphatidylinositol glycan anchor biosynthesis, class Q isoform 1 [Homo sapiens] Length = 760 Score = 27.3 bits (59), Expect = 6.6 Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 30/149 (20%) Query: 14 AHLVPEDV--APVAFLTAPIGEAPRTEAMADVSWGLGLGQGTEQVVEGATQGLAQLQGPH 71 AHL P + P A L P+ +A V WG L E+ G + LA+L PH Sbjct: 521 AHLPPPQLWLPPQALLGRPVPQA--------VPWGAHLPLEAERGQAGLRELLARLAPPH 572 Query: 72 -HVQATFYP-----------ELGPGLCVSR----IQSSPGLQLQGLSEA-GLSLSLAAA- 113 H Q + P L LC + GL++ G + G LAA Sbjct: 573 GHSQPSALPGWHQLSWRMSCALWTLLCAPEHGRPCYHTLGLEVIGSEQMWGWPARLAALH 632 Query: 114 --HCCQEVPRPSLLTFPKGQVWGCWCPQH 140 HC P P+ G+ CP+H Sbjct: 633 HWHCLPWDPLPTCCGHHGGEHSNPRCPEH 661 >gi|145275213 coagulation factor XII precursor [Homo sapiens] Length = 615 Score = 26.9 bits (58), Expect = 8.6 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 18/88 (20%) Query: 47 LGLGQGTEQVVEGATQ---GLAQLQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSE 103 L GQ + + T+ GL L+G H A Y G C + + + Sbjct: 357 LSCGQRLRKSLSSMTRVVGGLVALRGAHPYIAALY--WGHSFCAGSLIAPCWV------- 407 Query: 104 AGLSLSLAAAHCCQEVPRPSLLTFPKGQ 131 L AAHC Q+ P P LT GQ Sbjct: 408 ------LTAAHCLQDRPAPEDLTVVLGQ 429 >gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] Length = 1215 Score = 26.9 bits (58), Expect = 8.6 Identities = 33/118 (27%), Positives = 39/118 (33%), Gaps = 23/118 (19%) Query: 57 VEGATQGLAQ-LQGPHHVQATFYPELGPGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHC 115 V+G T Q L PHH P GL V +Q +P S+ H Sbjct: 1044 VQGRTSWQPQSLPVPHH------PACLSGLSVPLLQPTPR-------------SVRLCHL 1084 Query: 116 CQEVPRPSLLTFPKGQVWGCWCPQHVYLLLWPPGLLRGEGVAIQPPPY---RAPWKSG 170 P P P + L P LRG G A+Q PP RA W G Sbjct: 1085 SLRAPLPPPFATPTSCLSQACLSSSTLSLHLSPYPLRGPGDAVQRPPTTQGRAQWGPG 1142 >gi|24797153 faciogenital dysplasia protein [Homo sapiens] Length = 961 Score = 26.9 bits (58), Expect = 8.6 Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 19/107 (17%) Query: 30 PIGEAPRTEAMADVSWGL-------GLGQGTEQVVEGATQGLAQLQGPHHVQATFYPELG 82 P G +P+ S+ L GL QG +V+ + Q PH PE G Sbjct: 78 PCGPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPGQSLEPH-------PE-G 129 Query: 83 PGLCVSRIQSSPGLQLQGLSEAGLSLSLAAAHCCQEVPRPSLLTFPK 129 P R++S PG + S+ L A Q P+PS L P+ Sbjct: 130 P----QRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPR 172 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.139 0.481 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,565,487 Number of Sequences: 37866 Number of extensions: 444348 Number of successful extensions: 1018 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1005 Number of HSP's gapped (non-prelim): 35 length of query: 171 length of database: 18,247,518 effective HSP length: 95 effective length of query: 76 effective length of database: 14,650,248 effective search space: 1113418848 effective search space used: 1113418848 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.