C4orf50 30289

Name: C4orf50	Sequence: fasta or formatted (276aa)		NCBI GI: 46409442
Description: hypothetical protein LOC389197		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 28 2 C cysteine 1.8 5 1 D aspartate 3.6 10 1 E glutamate 9.4 26 2 F phenylalanine 0.7 2 1 G glycine 2.9 8 2 H histidine 4.0 11 2 I isoleucine 1.8 5 1 K lysine 4.0 11 2 L leucine 17.4 48 3 M methionine 2.2 6 1 N asparagine 2.5 7 1 P proline 6.9 19 1 Q glutamine 8.0 22 2 R arginine 5.4 15 1 S serine 7.6 21 2 T threonine 5.1 14 1 V valine 5.1 14 1 W tryptophan 0.7 2 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC389197 SYNE1 0.027 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.027 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.027 spectrin repeat containing, nuclear envelope 1 isof... NUMA1 0.027 nuclear mitotic apparatus protein 1 PLEC1 0.023 plectin 1 isoform 11 PLEC1 0.023 plectin 1 isoform 10 PLEC1 0.023 plectin 1 isoform 8 PLEC1 0.023 plectin 1 isoform 7 PLEC1 0.023 plectin 1 isoform 6 PLEC1 0.023 plectin 1 isoform 3 PLEC1 0.023 plectin 1 isoform 2 PLEC1 0.023 plectin 1 isoform 1 LOC341378 0.021 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 0.021 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 0.021 PREDICTED: hypothetical protein CROCC 0.021 ciliary rootlet coiled-coil STK36 0.019 serine/threonine kinase 36 MYH10 0.019 myosin, heavy polypeptide 10, non-muscle KIF5A 0.019 kinesin family member 5A MAP4K4 0.019 mitogen-activated protein kinase kinase kinase kinas... SEPT8 0.019 septin 8 isoform d SEPT8 0.019 septin 8 isoform c SEPT8 0.019 septin 8 isoform a SEPT8 0.019 septin 8 isoform b SH3BP5L 0.019 SH3-binding domain protein 5-like TNIP2 0.017 A20-binding inhibitor of NF-kappaB activation 2 iso... TRIM39 0.017 tripartite motif-containing 39 isoform 2 TRIM39 0.017 tripartite motif-containing 39 isoform 1 CIT 0.017 citron Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.