Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239749533
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo
sapiens]
(537 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo ... 1098 0.0
gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo ... 1098 0.0
gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo ... 1098 0.0
gi|239753064 PREDICTED: hypothetical protein [Homo sapiens] 159 5e-39
gi|239747619 PREDICTED: hypothetical protein XP_002347911 [Homo ... 159 6e-39
gi|239741490 PREDICTED: hypothetical protein XP_002342214 [Homo ... 159 6e-39
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 36 0.10
gi|239755085 PREDICTED: hypothetical protein [Homo sapiens] 35 0.17
gi|169176429 PREDICTED: hypothetical protein [Homo sapiens] 35 0.17
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 34 0.29
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 34 0.29
gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo... 33 0.50
gi|239756851 PREDICTED: hypothetical protein [Homo sapiens] 33 0.86
gi|239751343 PREDICTED: hypothetical protein XP_002347813 [Homo ... 33 0.86
gi|239745842 PREDICTED: hypothetical protein XP_002343603 [Homo ... 33 0.86
gi|91208420 bassoon protein [Homo sapiens] 33 0.86
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 33 0.86
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 33 0.86
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 33 0.86
gi|194294551 cysteine sulfinic acid decarboxylase [Homo sapiens] 32 1.1
gi|151301154 mucin 6, gastric [Homo sapiens] 32 1.9
gi|84781739 leucine-rich repeats and transmembrane domains 2 [Ho... 32 1.9
gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo sap... 31 2.5
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 31 2.5
gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo sap... 31 2.5
gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo sap... 31 2.5
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 31 2.5
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 31 2.5
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 31 2.5
gi|41281911 Ymer protein long isoform [Homo sapiens] 31 3.3
>gi|239755033 PREDICTED: hypothetical protein XP_002346199 [Homo
sapiens]
Length = 537
Score = 1098 bits (2841), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV
Sbjct: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
Query: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA
Sbjct: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
Query: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT
Sbjct: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
Query: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG
Sbjct: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
Query: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA
Sbjct: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
Query: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM
Sbjct: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
Query: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH
Sbjct: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
Query: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH
Sbjct: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
Query: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE
Sbjct: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
>gi|239749533 PREDICTED: hypothetical protein XP_002347079 [Homo
sapiens]
Length = 537
Score = 1098 bits (2841), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV
Sbjct: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
Query: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA
Sbjct: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
Query: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT
Sbjct: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
Query: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG
Sbjct: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
Query: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA
Sbjct: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
Query: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM
Sbjct: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
Query: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH
Sbjct: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
Query: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH
Sbjct: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
Query: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE
Sbjct: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
>gi|239743682 PREDICTED: hypothetical protein XP_002342945 [Homo
sapiens]
Length = 537
Score = 1098 bits (2841), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV
Sbjct: 1 MDDGAGLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPV 60
Query: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA
Sbjct: 61 GNARVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVA 120
Query: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT
Sbjct: 121 DGDDLAVSQLIALLQGGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHT 180
Query: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG
Sbjct: 181 VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
Query: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA
Sbjct: 241 MLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALGLVAHMGVLPTHAHHHA 300
Query: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM
Sbjct: 301 LVLGVPHDEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSM 360
Query: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH
Sbjct: 361 YARYLLNSRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAH 420
Query: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH
Sbjct: 421 NQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLH 480
Query: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE
Sbjct: 481 ATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDPE 537
>gi|239753064 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 159 bits (403), Expect = 5e-39
Identities = 85/140 (60%), Positives = 99/140 (70%), Gaps = 15/140 (10%)
Query: 171 EAVATLDGHT------VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHL 224
EA A DG +GDP H G V+GQHGLDGHVHG EGLKHDLGHL
Sbjct: 41 EAFAVDDGRAGLVVLLLGDP-----HLLEG----VEGQHGLDGHVHGGHVEGLKHDLGHL 91
Query: 225 LAAGLGVQGGLGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALG 284
LA GLG++GGLG+Q G+LLG+H +L +EGVVPDLLHV+PVG+DA+LD LQGQD SLAL
Sbjct: 92 LAVGLGIEGGLGEQGGVLLGSHAKLVVEGVVPDLLHVIPVGDDAVLDRVLQGQDTSLALS 151
Query: 285 LVAHMGVLPTHAHHHALVLG 304
LVAH+G+ TH H AL G
Sbjct: 152 LVAHVGIFLTHTDHDALRSG 171
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 14/68 (20%)
Query: 1 MDDG-AGLIILLLADPHLLEG--GQRGQDGAANPHRVLELRRSNDLDLHRA--------- 48
+DDG AGL++LLL DPHLLEG GQ G DG + V L+ +DL A
Sbjct: 45 VDDGRAGLVVLLLGDPHLLEGVEGQHGLDGHVHGGHVEGLK--HDLGHLLAVGLGIEGGL 102
Query: 49 GRQGGDLL 56
G QGG LL
Sbjct: 103 GEQGGVLL 110
>gi|239747619 PREDICTED: hypothetical protein XP_002347911 [Homo
sapiens]
Length = 201
Score = 159 bits (402), Expect = 6e-39
Identities = 84/137 (61%), Positives = 98/137 (71%), Gaps = 15/137 (10%)
Query: 171 EAVATLDGHT------VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHL 224
EA A DG +GDP H G V+GQHGLDGHVHG EGLKHDLGHL
Sbjct: 41 EAFAVDDGRAGLVVLLLGDP-----HLLEG----VEGQHGLDGHVHGGHVEGLKHDLGHL 91
Query: 225 LAAGLGVQGGLGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALG 284
LA GLG++GGLG+Q G+LLG+H +L +EGVVPDLLHV+PVG+DA+LD LQGQD SLAL
Sbjct: 92 LAVGLGIEGGLGEQGGVLLGSHAKLVVEGVVPDLLHVIPVGDDAVLDRVLQGQDTSLALS 151
Query: 285 LVAHMGVLPTHAHHHAL 301
LVAH+G+ TH H AL
Sbjct: 152 LVAHVGIFLTHTDHDAL 168
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 14/68 (20%)
Query: 1 MDDG-AGLIILLLADPHLLEG--GQRGQDGAANPHRVLELRRSNDLDLHRA--------- 48
+DDG AGL++LLL DPHLLEG GQ G DG + V L+ +DL A
Sbjct: 45 VDDGRAGLVVLLLGDPHLLEGVEGQHGLDGHVHGGHVEGLK--HDLGHLLAVGLGIEGGL 102
Query: 49 GRQGGDLL 56
G QGG LL
Sbjct: 103 GEQGGVLL 110
>gi|239741490 PREDICTED: hypothetical protein XP_002342214 [Homo
sapiens]
Length = 201
Score = 159 bits (402), Expect = 6e-39
Identities = 84/137 (61%), Positives = 98/137 (71%), Gaps = 15/137 (10%)
Query: 171 EAVATLDGHT------VGDPVTGVHHGTSGTAKEVQGQHGLDGHVHGWGDEGLKHDLGHL 224
EA A DG +GDP H G V+GQHGLDGHVHG EGLKHDLGHL
Sbjct: 41 EAFAVDDGRAGLVVLLLGDP-----HLLEG----VEGQHGLDGHVHGGHVEGLKHDLGHL 91
Query: 225 LAAGLGVQGGLGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQGQDASLALG 284
LA GLG++GGLG+Q G+LLG+H +L +EGVVPDLLHV+PVG+DA+LD LQGQD SLAL
Sbjct: 92 LAVGLGIEGGLGEQGGVLLGSHAKLVVEGVVPDLLHVIPVGDDAVLDRVLQGQDTSLALS 151
Query: 285 LVAHMGVLPTHAHHHAL 301
LVAH+G+ TH H AL
Sbjct: 152 LVAHVGIFLTHTDHDAL 168
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 14/68 (20%)
Query: 1 MDDG-AGLIILLLADPHLLEG--GQRGQDGAANPHRVLELRRSNDLDLHRA--------- 48
+DDG AGL++LLL DPHLLEG GQ G DG + V L+ +DL A
Sbjct: 45 VDDGRAGLVVLLLGDPHLLEGVEGQHGLDGHVHGGHVEGLK--HDLGHLLAVGLGIEGGL 102
Query: 49 GRQGGDLL 56
G QGG LL
Sbjct: 103 GEQGGVLL 110
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 35.8 bits (81), Expect = 0.10
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 410 PDKTPPGSIAHNQSQPAQACTA--------QQRGSPASSPRGKHLNPGCWLYWRSTEENP 461
P TPPG + Q+ PAQA A + SPA +P G+ +PG +++
Sbjct: 26 PAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGR-ASPGRASPAQASPAQA 84
Query: 462 KLLPTAPACLAPSSTSPLHATFCAWQSTRPNPTRIYL 498
+PA + S +S ++ S +PTR+YL
Sbjct: 85 SPARASPALASLSRSSSGRSSSARSASVTTSPTRVYL 121
Score = 29.6 bits (65), Expect = 7.3
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Query: 410 PDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPA 469
P TPPG + ++ PAQA AQ SPA + +P RS+ +A
Sbjct: 61 PAGTPPGRASPGRASPAQASPAQ--ASPARA------SPALASLSRSSSGRSSSARSASV 112
Query: 470 CLAPSSTSPLHATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTA 513
+P+ + AT R +P R +TR PGT+
Sbjct: 113 TTSPTRVYLVRATPVGAVPIRSSPARSAPATRATRE---SPGTS 153
>gi|239755085 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 35.0 bits (79), Expect = 0.17
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%)
Query: 402 PCLFRKKEPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENP 461
PC R+ PD+ P IA SQP A +P S+P P +L+ P
Sbjct: 10 PCSRRRPLPDRRPQAPIARESSQPGPAHPV----APTSTP-----GPFRFLFNPQQSRGP 60
Query: 462 KLL-----PTAPACLAPSSTSP---LHATFCAWQSTRPNPTRIYLSTRRL---HRIMVPP 510
+ P P L P + +P L A C S R P ++ L + +PP
Sbjct: 61 SPVSFYSAPRRPCPLPPDTGAPLGVLPAVGCGLPS-RKKPVLSSGNSMMLGHPSSVRIPP 119
Query: 511 GTAGRNGPMPGERNTKRTAARAEDDP 536
++ + P+P R +T R +++P
Sbjct: 120 PSSKKLIPIPA-RPPNKTKVRTQEEP 144
>gi|169176429 PREDICTED: hypothetical protein [Homo sapiens]
Length = 310
Score = 35.0 bits (79), Expect = 0.17
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%)
Query: 402 PCLFRKKEPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENP 461
PC R+ PD+ P IA SQP A +P S+P P +L+ P
Sbjct: 10 PCSRRRPLPDRRPQAPIARESSQPGPAHPV----APTSTP-----GPFRFLFNPQQSRGP 60
Query: 462 KLL-----PTAPACLAPSSTSP---LHATFCAWQSTRPNPTRIYLSTRRL---HRIMVPP 510
+ P P L P + +P L A C S R P ++ L + +PP
Sbjct: 61 SPVSFYSAPRRPCPLPPDTGAPLGVLPAVGCGLPS-RKKPVLSSGNSMMLGHPSSVRIPP 119
Query: 511 GTAGRNGPMPGERNTKRTAARAEDDP 536
++ + P+P R +T R +++P
Sbjct: 120 PSSKKLIPIPA-RPPNKTKVRTQEEP 144
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 34.3 bits (77), Expect = 0.29
Identities = 57/225 (25%), Positives = 80/225 (35%), Gaps = 26/225 (11%)
Query: 32 HRVLELRRSNDLDLHR--AGR--------QGGDLL----LHPVGNARVHGGAARQQCVGV 77
H VL+L+ + + H AGR +G DLL H G A +Q V
Sbjct: 151 HDVLDLQEAGRVHDHELLAGRHGEPARVAEGQDLLEAGGRHGAGQLEGALAVAAEQVAEV 210
Query: 78 KVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVADGDDLAVSQLI--ALLQ 135
+ H + G++G +D G A E + ++AA+ V + DL V L
Sbjct: 211 EAAGGQHRPV--GLEGLALDHDGHIAVEAQQALLVQAAQHCVPEVGDLDVQHLRHGGRAA 268
Query: 136 GGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHTVGDPVTGVHHGTSGT 195
G GS+ G L G + PL G+A T P T
Sbjct: 269 AGLGSQRG-AALAGLIYLPSAAAAAGRHCPLRLAGQAPRT-------QPACPAAPRMQQT 320
Query: 196 AKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
+E G G DE + + LA GLGV G + G
Sbjct: 321 EREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVG 365
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 34.3 bits (77), Expect = 0.29
Identities = 57/225 (25%), Positives = 80/225 (35%), Gaps = 26/225 (11%)
Query: 32 HRVLELRRSNDLDLHR--AGR--------QGGDLL----LHPVGNARVHGGAARQQCVGV 77
H VL+L+ + + H AGR +G DLL H G A +Q V
Sbjct: 151 HDVLDLQEAGRVHDHELLAGRHGEPARVAEGQDLLEAGGRHGAGQLEGALAVAAEQVAEV 210
Query: 78 KVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVADGDDLAVSQLI--ALLQ 135
+ H + G++G +D G A E + ++AA+ V + DL V L
Sbjct: 211 EAAGGQHRPV--GLEGLALDHDGHIAVEAQQALLVQAAQHCVPEVGDLDVQHLRHGGRAA 268
Query: 136 GGAGSRHGHLLLEGQSNIAQLLLDVTHDIPLSRGGEAVATLDGHTVGDPVTGVHHGTSGT 195
G GS+ G L G + PL G+A T P T
Sbjct: 269 AGLGSQRG-AALAGLIYLPSAAAAAGRHCPLRLAGQAPRT-------QPACPAAPRMQQT 320
Query: 196 AKEVQGQHGLDGHVHGWGDEGLKHDLGHLLAAGLGVQGGLGQQHG 240
+E G G DE + + LA GLGV G + G
Sbjct: 321 EREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVG 365
>gi|17738294 cyclin-dependent kinase inhibitor 2A isoform 4 [Homo
sapiens]
Length = 173
Score = 33.5 bits (75), Expect = 0.50
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 19 EGGQRGQDGAAN-PHRVLELRRSNDLDLHRAGRQGGDLLLHPVGNARVHGGAARQQCVG 76
+ GQR GAA P R +LRR RA R G L H G A G A R +C+G
Sbjct: 108 DDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGRARCLG 166
>gi|239756851 PREDICTED: hypothetical protein [Homo sapiens]
Length = 241
Score = 32.7 bits (73), Expect = 0.86
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289
LGQ+ G L G G +PD G+ A L LQ DA++A+G
Sbjct: 72 LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
Query: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325
GV+ + H LG + EG+ RGS +P H
Sbjct: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
>gi|239751343 PREDICTED: hypothetical protein XP_002347813 [Homo
sapiens]
Length = 241
Score = 32.7 bits (73), Expect = 0.86
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289
LGQ+ G L G G +PD G+ A L LQ DA++A+G
Sbjct: 72 LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
Query: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325
GV+ + H LG + EG+ RGS +P H
Sbjct: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
>gi|239745842 PREDICTED: hypothetical protein XP_002343603 [Homo
sapiens]
Length = 241
Score = 32.7 bits (73), Expect = 0.86
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 235 LGQQHGMLLGNHMQLPLEGVVPDLLHVVPVGNDAMLDEALQG-----QDASLALGLVAHM 289
LGQ+ G L G G +PD G+ A L LQ DA++A+G
Sbjct: 72 LGQRRGHLQGVEKHGAARGRLPD---GAQDGDAARLQAPLQQVCLHRDDAAVAVGQTCSG 128
Query: 290 GVLPTHAHHHALVLG---VPHDEGEDGRGSSSPAKPAFH 325
GV+ + H LG + EG+ RGS +P H
Sbjct: 129 GVVSKRVYQHLAALGQLRLGLPEGKTARGSRRGRQPQDH 167
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 32.7 bits (73), Expect = 0.86
Identities = 52/233 (22%), Positives = 84/233 (36%), Gaps = 26/233 (11%)
Query: 308 DEGEDGRGSSSPAKPAFHMPEPLSTTGVAISSSMHRRIITFARPARWAPLDSMYARYLLN 367
D + G +P + P+S + S S R+I R + ++ L +
Sbjct: 1299 DPMKQNGGPLTPGTSPTQLAAPVSFSTPTSSDSSGGRVIPDVRVTQHFAKETQDPLKLHS 1358
Query: 368 SRNSSMEGLKVIILQLGFRGLSTSATSMMVRAVLPCLFRKKEPDKTPPGSIAHNQSQPAQ 427
S S K I + +G T AT+ AV PC P + PA
Sbjct: 1359 SPASPSSASKEIGMPFS-QGPGTPATT----AVAPC-----------PAGLPRGYMTPAS 1402
Query: 428 ACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTS----PLHATF 483
+++ SP+S+ +P Y TE+ LP AP+ LA + + PL A+
Sbjct: 1403 PAGSERSPSPSSTAHSYGHSPTTANYGSQTED----LPQAPSGLAAAGRAAREKPLSAS- 1457
Query: 484 CAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGERNTKRTAARAEDDP 536
+ P P+R Y + P + PG+ + TA + P
Sbjct: 1458 -DGEGGTPQPSRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTP 1509
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform
4 [Homo sapiens]
Length = 3321
Score = 32.7 bits (73), Expect = 0.86
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 270 LDEALQGQDASLALGLVAHMGV-LPTHAHHHALVLGVPHDEGEDGRGSSSPAKPAFHMPE 328
L E + D L AH V + T H L+ V + GE+G S + PA P
Sbjct: 348 LAEGTEDLDGELLPTPSAHPSVVMMTAGRCHTLLSPVTEESGEEGTNSEISSPPACRSPS 407
Query: 329 PLSTTGVAISSSM 341
P++ T +++ +
Sbjct: 408 PVANTDASVNQDI 420
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.7 bits (73), Expect = 0.86
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 270 LDEALQGQDASLALGLVAHMGV-LPTHAHHHALVLGVPHDEGEDGRGSSSPAKPAFHMPE 328
L E + D L AH V + T H L+ V + GE+G S + PA P
Sbjct: 5753 LAEGTEDLDGELLPTPSAHPSVVMMTAGRCHTLLSPVTEESGEEGTNSEISSPPACRSPS 5812
Query: 329 PLSTTGVAISSSM 341
P++ T +++ +
Sbjct: 5813 PVANTDASVNQDI 5825
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.7 bits (73), Expect = 0.86
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 270 LDEALQGQDASLALGLVAHMGV-LPTHAHHHALVLGVPHDEGEDGRGSSSPAKPAFHMPE 328
L E + D L AH V + T H L+ V + GE+G S + PA P
Sbjct: 5824 LAEGTEDLDGELLPTPSAHPSVVMMTAGRCHTLLSPVTEESGEEGTNSEISSPPACRSPS 5883
Query: 329 PLSTTGVAISSSM 341
P++ T +++ +
Sbjct: 5884 PVANTDASVNQDI 5896
>gi|194294551 cysteine sulfinic acid decarboxylase [Homo sapiens]
Length = 520
Score = 32.3 bits (72), Expect = 1.1
Identities = 36/120 (30%), Positives = 47/120 (39%), Gaps = 25/120 (20%)
Query: 6 GLIILLLADPHLLEGGQRGQDGAANPHRVLELRRSNDLDLHRAGRQGGDLLLHPVGN--A 63
G ++L HLL+G QR A NPH++L AG Q LLL N
Sbjct: 305 GSVLLSQTHRHLLDGIQRADSVAWNPHKLL-----------AAGLQCSALLLQDTSNLLK 353
Query: 64 RVHGGAARQQCVGVKVFVDVHITLHNGVQGSFMDATGFHAQEGKLEECLRAAELLVADGD 123
R HG A K F DV + + V Q G+ +CL+ + A GD
Sbjct: 354 RCHGSQASYLFQQDK-FYDVALDTGDKV-----------VQCGRRVDCLKLWLMWKAQGD 401
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/127 (27%), Positives = 44/127 (34%), Gaps = 17/127 (13%)
Query: 410 PDKTPPGSIA------HNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKL 463
P PP S + H P A A S S+P G P ST P +
Sbjct: 1444 PTHVPPFSTSLVTPSTHTVITPTHAQMATS-ASNHSAPTGTIPPPTTLKATGSTHTAPPI 1502
Query: 464 LPTAPACLAPSSTSPLHATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMPGER 523
PT S TS H++F ST PT ++ T H V P + P P
Sbjct: 1503 TPTT------SGTSQAHSSF----STNKTPTSLHSHTSSTHHPEVTPTSTTTITPNPTST 1552
Query: 524 NTKRTAA 530
T+ A
Sbjct: 1553 RTRTPVA 1559
>gi|84781739 leucine-rich repeats and transmembrane domains 2 [Homo
sapiens]
Length = 370
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 402 PCLFRKKEPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPR 442
PC EP K PG A + +P+ AC +QR PAS R
Sbjct: 268 PCTKASPEPAKPKPG--AEPEPEPSTACPQKQRHRPASVRR 306
>gi|239757400 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 31.2 bits (69), Expect = 2.5
Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 410 PDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPA 469
P P + A QS Q C AQ GS P+ +L PG EE KL+ AP
Sbjct: 158 PHAPPASASAQPQSVRRQLCRAQT-GSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPP 216
Query: 470 CLAPSSTSPLHATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMP 520
P A QS RP TR L R ++ A P P
Sbjct: 217 ---PPG---------AMQSLRPEQTRGLLEPERTKTLLPRESRAWEKPPHP 255
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 31.2 bits (69), Expect = 2.5
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 426 AQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPACLAPSSTSPLHATFCA 485
A +QR SSP + L + +W S LP +PA A +SP T
Sbjct: 65 AGVARTEQRDHSQSSPPCRRL--ASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPP 122
Query: 486 WQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMP 520
Q+ +P P+ + L PPG+ P P
Sbjct: 123 PQAVQPRPSEPTPGSEAL-----PPGSLPEGEPRP 152
>gi|169214485 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 31.2 bits (69), Expect = 2.5
Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 410 PDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPA 469
P P + A QS Q C AQ GS P+ +L PG EE KL+ AP
Sbjct: 158 PHAPPASASAQPQSVRRQLCRAQT-GSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPP 216
Query: 470 CLAPSSTSPLHATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMP 520
P A QS RP TR L R ++ A P P
Sbjct: 217 ---PPG---------AMQSLRPEQTRGLLEPERTKTLLPRESRAWEKPPHP 255
>gi|169213439 PREDICTED: hypothetical protein LOC147670 [Homo
sapiens]
Length = 338
Score = 31.2 bits (69), Expect = 2.5
Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 410 PDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAPA 469
P P + A QS Q C AQ GS P+ +L PG EE KL+ AP
Sbjct: 158 PHAPPASASAQPQSVRRQLCRAQT-GSGWGGPQVLNLVPGEPERTLEQEEKEKLVSEAPP 216
Query: 470 CLAPSSTSPLHATFCAWQSTRPNPTRIYLSTRRLHRIMVPPGTAGRNGPMP 520
P A QS RP TR L R ++ A P P
Sbjct: 217 ---PPG---------AMQSLRPEQTRGLLEPERTKTLLPRESRAWEKPPHP 255
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.2 bits (69), Expect = 2.5
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Query: 406 RKKEPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPR--GKHLNPGC-WLYWRSTEENPK 462
R +EP +P H QP + C P SP+ G HL+P L+ E P
Sbjct: 755 RPEEPHLSPQAEEPHLSPQPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPH 814
Query: 463 LLPT-APACLAP----SSTSPLHATFCAWQSTRPNPTRIYLS 499
L P CL+P S SP C P P +LS
Sbjct: 815 LSPVPEEPCLSPQPEESHLSPQSEEPC----LSPRPEESHLS 852
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 31.2 bits (69), Expect = 2.5
Identities = 32/133 (24%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 409 EPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAP 468
+PD P A + A+ +Q P S G NP W+ R E P +P
Sbjct: 598 DPDPAIPAPTA---TPSARGAVIRQNSDPTSEGPGPSPNPPAWV--RPDNEAPPKVPQRT 652
Query: 469 ACLAPSSTSPLHATFCAWQSTRPNPT-----RIYLSTRRLHRIMVPPGTAGRNGPMPGER 523
+ +A + + Q+ R P +IYL R PPG + PG
Sbjct: 653 SSIATALNTSGAGGSRPAQAVRARPRSNSAWQIYLQRRAERGTPKPPGPPAQ---PPGPP 709
Query: 524 NTKRTAARAEDDP 536
N DP
Sbjct: 710 NASSNPDLRRSDP 722
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 31.2 bits (69), Expect = 2.5
Identities = 32/133 (24%), Positives = 45/133 (33%), Gaps = 13/133 (9%)
Query: 409 EPDKTPPGSIAHNQSQPAQACTAQQRGSPASSPRGKHLNPGCWLYWRSTEENPKLLPTAP 468
+PD P A + A+ +Q P S G NP W+ R E P +P
Sbjct: 618 DPDPAIPAPTA---TPSARGAVIRQNSDPTSEGPGPSPNPPAWV--RPDNEAPPKVPQRT 672
Query: 469 ACLAPSSTSPLHATFCAWQSTRPNPT-----RIYLSTRRLHRIMVPPGTAGRNGPMPGER 523
+ +A + + Q+ R P +IYL R PPG + PG
Sbjct: 673 SSIATALNTSGAGGSRPAQAVRARPRSNSAWQIYLQRRAERGTPKPPGPPAQ---PPGPP 729
Query: 524 NTKRTAARAEDDP 536
N DP
Sbjct: 730 NASSNPDLRRSDP 742
>gi|41281911 Ymer protein long isoform [Homo sapiens]
Length = 482
Score = 30.8 bits (68), Expect = 3.3
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 412 KTPPGSIAHNQSQPAQACTAQQRGSPASSPRGK---HLNPGCWLYWRSTEENPK--LLPT 466
K P N +P Q C++++ S +SS +G+ H+N RST+E P+ LLPT
Sbjct: 181 KEKPEHPLENLEEPEQHCSSKRSLSSSSSGKGRDNPHINNEQHERKRSTQERPRRPLLPT 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,830,554
Number of Sequences: 37866
Number of extensions: 1259391
Number of successful extensions: 3611
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 3556
Number of HSP's gapped (non-prelim): 98
length of query: 537
length of database: 18,247,518
effective HSP length: 107
effective length of query: 430
effective length of database: 14,195,856
effective search space: 6104218080
effective search space used: 6104218080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.