Guide to the Human Genome
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Name: CSAD Sequence: fasta or formatted (520aa) NCBI GI: 194294551
Description:

cysteine sulfinic acid decarboxylase

Referenced in:

Amino Acid Catabolism
GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         42           2
 C cysteine            2.5         13           1
 D aspartate           5.2         27           1
 E glutamate           6.9         36           3
 F phenylalanine       4.0         21           2
 G glycine             7.3         38           2
 H histidine           2.1         11           1
 I isoleucine          3.1         16           2
 K lysine              4.8         25           2
 L leucine            13.3         69           3
 M methionine          2.5         13           2
 N asparagine          1.9         10           1
 P proline             4.4         23           2
 Q glutamine           5.2         27           2
 R arginine            6.3         33           2
 S serine              6.9         36           2
 T threonine           3.3         17           2
 V valine              8.1         42           3
 W tryptophan          1.5          8           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteine sulfinic acid decarboxylase 
GADL1                 0.598   glutamate decarboxylase-like 1 
GAD2                  0.495   glutamate decarboxylase 2 
GAD2                  0.495   glutamate decarboxylase 2 
GAD1                  0.494   glutamate decarboxylase 1 isoform GAD67 
DDC                   0.091   dopa decarboxylase (aromatic L-amino acid decarboxy...
DDC                   0.091   dopa decarboxylase (aromatic L-amino acid decarboxyla...
HDC                   0.083   histidine decarboxylase 
GAD1                  0.048   glutamate decarboxylase 1 isoform GAD25 
PDXDC1                0.028   pyridoxal-dependent decarboxylase domain containing...
SGPL1                 0.009   sphingosine-1-phosphate lyase 1 
LOC100291802          0.007   PREDICTED: hypothetical protein XP_002346199 
LOC100291215          0.007   PREDICTED: hypothetical protein XP_002347079 
LOC100287684          0.007   PREDICTED: hypothetical protein XP_002342945 
AARS2                 0.006   alanyl-tRNA synthetase 2, mitochondrial 
INO80D                0.005   INO80 complex subunit D 
HERC2                 0.005   hect domain and RLD 2 
AGXT                  0.005   alanine-glyoxylate aminotransferase 
CAPS                  0.005   calcyphosine isoform a 
ITSN2                 0.005   intersectin 2 isoform 3 
ITSN2                 0.005   intersectin 2 isoform 1 
ITSN2                 0.005   intersectin 2 isoform 2 
NFS1                  0.004   NFS1 nitrogen fixation 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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