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Search of human proteins with 239749521
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749521 PREDICTED: hypothetical protein XP_002347072 [Homo
sapiens]
(184 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749521 PREDICTED: hypothetical protein XP_002347072 [Homo ... 381 e-106
gi|239743660 PREDICTED: hypothetical protein XP_002342926 [Homo ... 270 4e-73
gi|239754965 PREDICTED: hypothetical protein [Homo sapiens] 261 2e-70
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 32 0.31
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens] 32 0.40
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 31 0.53
gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi... 30 1.2
gi|153792230 hypothetical protein LOC57670 [Homo sapiens] 30 1.2
gi|153792074 proline rich 12 [Homo sapiens] 30 1.5
gi|91823271 xanthine dehydrogenase [Homo sapiens] 29 2.0
gi|4505055 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is... 29 2.0
gi|47458820 signal transducer and activator of transcription 3 i... 29 2.6
gi|21618338 signal transducer and activator of transcription 3 i... 29 2.6
gi|21618340 signal transducer and activator of transcription 3 i... 29 2.6
gi|87578394 microtubule-associated protein 2 isoform 5 [Homo sap... 29 2.6
gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sap... 29 2.6
gi|87578392 microtubule-associated protein 2 isoform 2 [Homo sap... 29 2.6
gi|87578255 microtubule-associated protein 2 isoform 4 [Homo sap... 29 2.6
gi|112734867 retinitis pigmentosa GTPase regulator interacting p... 29 2.6
gi|6912330 deafness locus associated putative guanine nucleotide... 29 2.6
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 28 3.4
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 28 3.4
gi|51466913 PREDICTED: hypothetical protein [Homo sapiens] 28 3.4
gi|51466907 PREDICTED: hypothetical protein [Homo sapiens] 28 3.4
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 28 3.4
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 28 3.4
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens] 28 3.4
gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens] 28 3.4
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 28 4.5
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 28 4.5
>gi|239749521 PREDICTED: hypothetical protein XP_002347072 [Homo
sapiens]
Length = 184
Score = 381 bits (979), Expect = e-106
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP
Sbjct: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
Query: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS
Sbjct: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
Query: 121 VSMTGSDPVTKQSAKDSPPLPLELGKEKEKPKLHLAEPGLSLSSESRDAPRGRGGYKIST 180
VSMTGSDPVTKQSAKDSPPLPLELGKEKEKPKLHLAEPGLSLSSESRDAPRGRGGYKIST
Sbjct: 121 VSMTGSDPVTKQSAKDSPPLPLELGKEKEKPKLHLAEPGLSLSSESRDAPRGRGGYKIST 180
Query: 181 EMSS 184
EMSS
Sbjct: 181 EMSS 184
>gi|239743660 PREDICTED: hypothetical protein XP_002342926 [Homo
sapiens]
Length = 329
Score = 270 bits (691), Expect = 4e-73
Identities = 129/137 (94%), Positives = 131/137 (95%)
Query: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP
Sbjct: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
Query: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS
Sbjct: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
Query: 121 VSMTGSDPVTKQSAKDS 137
VSMTGS P ++ K S
Sbjct: 121 VSMTGSIPPGGRNGKKS 137
>gi|239754965 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 261 bits (667), Expect = 2e-70
Identities = 127/144 (88%), Positives = 130/144 (90%), Gaps = 5/144 (3%)
Query: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP
Sbjct: 1 MNTDTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADP 60
Query: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS
Sbjct: 61 PVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNS 120
Query: 121 -----VSMTGSDPVTKQSAKDSPP 139
+ +G + SAK SPP
Sbjct: 121 APDTVAATSGVCGELRDSAKRSPP 144
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 32.0 bits (71), Expect = 0.31
Identities = 23/62 (37%), Positives = 28/62 (45%)
Query: 38 PGEAGQDPSLKPSQGGTALLADPPVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSLL 97
PG + + G + L P + RPPQLL+ L G L L SL L SLL
Sbjct: 703 PGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASLLGDLSSLTSSPGALPSLL 762
Query: 98 QP 99
QP
Sbjct: 763 QP 764
>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
Length = 841
Score = 31.6 bits (70), Expect = 0.40
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 17 IRVRDASTSQGTQ--GLPENHQLPGEAGQDPSLKPSQGGTALLADPPVSDFRPPQLL 71
IR R S S+ Q G P N P E ++ + P+ T + +PP + +PP LL
Sbjct: 20 IRPRPPSRSRAAQSPGPPHNGSSPQELPRNSNDAPTPMCTPIFWEPPAASLKPPALL 76
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 31.2 bits (69), Expect = 0.53
Identities = 43/155 (27%), Positives = 56/155 (36%), Gaps = 10/155 (6%)
Query: 8 EGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADPPVSDFRP 67
E S V +S R R S +G + LP P L+ S+ TA+ D P F
Sbjct: 355 EASEVAQSN-RGRGRSRPRGGTSQSDISTLP-TVPSSPDLEVSE--TAMEVDTPAEQFLQ 410
Query: 68 PQLLTCLGGPWCLCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNSVSMTGSD 127
P + + S E P LL D E ++S G + S + S
Sbjct: 411 PSTSSTMSAQ---AHSTSSPTESPHSTPLLSSPDS---EQRQSVEASGHHTHHQSDSPSS 464
Query: 128 PVTKQSAKDSPPLPLELGKEKEKPKLHLAEPGLSL 162
V KQ S + EK PK EP LSL
Sbjct: 465 VVNKQLGSMSLDEQQDNNNEKLSPKPGTGEPVLSL 499
>gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo
sapiens]
Length = 464
Score = 30.0 bits (66), Expect = 1.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 18 RVRDASTSQGTQGLPENHQLPGEAGQ-DPSLKPSQGGTALLADPPVSDFRPPQLLTCL 74
++ +++ G G PEN Q P A + PS P Q G A P D++PP CL
Sbjct: 314 QIPESAIQGGELGAPENLQPPPAATELGPSTSP-QMGRRTPAQVPSVDWQPPHSTPCL 370
>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
Length = 1884
Score = 30.0 bits (66), Expect = 1.2
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 21/154 (13%)
Query: 31 LPENHQLPGEAGQDPSLKPSQGGTALLADPPVSDFRPPQLLTCLGGPWCLCPLCSLQVED 90
LP + E + +L T +L+ PVS FRP + C C++
Sbjct: 333 LPSDSSKTSELHSNSALPGPVDNTHILS--PVSSFRP----------YTWCAACTVPSPQ 380
Query: 91 PWLFSLLQPRDQLRLENQESCCVCGREDNSVSMTGSDPVTKQSAKDSPPLPLELGKEKEK 150
L + L +D + E+ C+ E++S+S+ S ++ P +
Sbjct: 381 QVLATSLMEKDVGSGDGAETLCMTVLEESSISLMSSVVADFSEFEEDPQV---------F 431
Query: 151 PKLHLAEPGLSLSSESRDAPRGRGGYKISTEMSS 184
L + P + LSS S + G +MSS
Sbjct: 432 NTLFPSRPIVPLSSRSMEISETSVGISAEVDMSS 465
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 29.6 bits (65), Expect = 1.5
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 106 ENQESCCVCGREDNSVSMTGSDPVTKQ------SAKDSPPLPLELGKEKEKPKLHLAEPG 159
+ QE+ VCG D +G + + ++ A+D P L L L +E P + +
Sbjct: 1550 KKQETAAVCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKA 1609
Query: 160 L--SLSSESRDAPR 171
L + E +D R
Sbjct: 1610 LLQKFTPEIKDGQR 1623
>gi|91823271 xanthine dehydrogenase [Homo sapiens]
Length = 1333
Score = 29.3 bits (64), Expect = 2.0
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 107 NQESCCVCGREDNSVSMTGS----DPVTKQSAKDSPPLPLELGKEKEKPKLHLAEPG--- 159
N +CC+ ++D+SVS++ S + T P P EL + K+ P+ L G
Sbjct: 175 NNPNCCMNQKKDHSVSLSPSLFKPEEFTPLDPTQEPIFPPELLRLKDTPRKQLRFEGERV 234
Query: 160 -----------LSLSSESRDAPRGRGGYKISTEM 182
L L ++ DA G +I EM
Sbjct: 235 TWIQASTLKELLDLKAQHPDAKLVVGNTEIGIEM 268
>gi|4505055 Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
isoform A [Homo sapiens]
Length = 512
Score = 29.3 bits (64), Expect = 2.0
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 4 DTQGEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQGGTALLADPPVS 63
D + + R E I VRD ++++ + +PE+ LPG+ Q + P + G ++A P
Sbjct: 18 DLKTQPVRNTERTIYVRDPTSNKQQRPVPESQLLPGQRFQ--TKDPEEQGDIVVALYPYD 75
Query: 64 DFRPPQL 70
P L
Sbjct: 76 GIHPDDL 82
>gi|47458820 signal transducer and activator of transcription 3
isoform 3 [Homo sapiens]
Length = 722
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 57 LADPPVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSL----LQPRDQLR 104
L D ++D++ Q + C+GGP +C L + W+ SL LQ R Q++
Sbjct: 235 LTDEELADWKRRQQIACIGGPPNIC----LDRLENWITSLAESQLQTRQQIK 282
>gi|21618338 signal transducer and activator of transcription 3
isoform 2 [Homo sapiens]
Length = 769
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 57 LADPPVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSL----LQPRDQLR 104
L D ++D++ Q + C+GGP +C L + W+ SL LQ R Q++
Sbjct: 235 LTDEELADWKRRQQIACIGGPPNIC----LDRLENWITSLAESQLQTRQQIK 282
>gi|21618340 signal transducer and activator of transcription 3
isoform 1 [Homo sapiens]
Length = 770
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 57 LADPPVSDFRPPQLLTCLGGPWCLCPLCSLQVEDPWLFSL----LQPRDQLR 104
L D ++D++ Q + C+GGP +C L + W+ SL LQ R Q++
Sbjct: 235 LTDEELADWKRRQQIACIGGPPNIC----LDRLENWITSLAESQLQTRQQIK 282
>gi|87578394 microtubule-associated protein 2 isoform 5 [Homo
sapiens]
Length = 559
Score = 28.9 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 22 ASTSQGTQGLPENHQLPGEAGQDPS--LKPSQGGTALLADPPVSDFRPPQL 70
+S + GT G P + P G S L PS+ A++ PP S P QL
Sbjct: 311 SSRTPGTPGTPSYPRTPHTPGTPKSAILVPSEKKVAIIRTPPKSPATPKQL 361
>gi|87578396 microtubule-associated protein 2 isoform 1 [Homo sapiens]
Length = 1827
Score = 28.9 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 22 ASTSQGTQGLPENHQLPGEAGQDPS--LKPSQGGTALLADPPVSDFRPPQL 70
+S + GT G P + P G S L PS+ A++ PP S P QL
Sbjct: 1610 SSRTPGTPGTPSYPRTPHTPGTPKSAILVPSEKKVAIIRTPPKSPATPKQL 1660
>gi|87578392 microtubule-associated protein 2 isoform 2 [Homo
sapiens]
Length = 471
Score = 28.9 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 22 ASTSQGTQGLPENHQLPGEAGQDPS--LKPSQGGTALLADPPVSDFRPPQL 70
+S + GT G P + P G S L PS+ A++ PP S P QL
Sbjct: 254 SSRTPGTPGTPSYPRTPHTPGTPKSAILVPSEKKVAIIRTPPKSPATPKQL 304
>gi|87578255 microtubule-associated protein 2 isoform 4 [Homo
sapiens]
Length = 502
Score = 28.9 bits (63), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 22 ASTSQGTQGLPENHQLPGEAGQDPS--LKPSQGGTALLADPPVSDFRPPQL 70
+S + GT G P + P G S L PS+ A++ PP S P QL
Sbjct: 254 SSRTPGTPGTPSYPRTPHTPGTPKSAILVPSEKKVAIIRTPPKSPATPKQL 304
>gi|112734867 retinitis pigmentosa GTPase regulator interacting
protein 1 [Homo sapiens]
Length = 1286
Score = 28.9 bits (63), Expect = 2.6
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 82 PLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNSVSMTGSD----PVTKQSAKDS 137
P S+QV+ W F + P L+ E Q G++ S S+ Q S
Sbjct: 915 PNGSIQVQLDWKFPYIPPESFLKPEAQTK----GKDTKDSSKISSEEEKASFPSQDQMAS 970
Query: 138 PPLPLELGKEKEKPK 152
P +P+E G+ + K K
Sbjct: 971 PEVPIEAGQYRSKRK 985
>gi|6912330 deafness locus associated putative guanine nucleotide
exchange factor [Homo sapiens]
Length = 458
Score = 28.9 bits (63), Expect = 2.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 80 LCPLCSLQVEDPWLFSLLQPRDQLRLENQESCCVCGREDNSVSMTGSDPV 129
LCP +L P F+ +P LEN ++ CV D+S S+T + V
Sbjct: 188 LCPGQTL----PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEV 233
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 28.5 bits (62), Expect = 3.4
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 27 GTQGLPENHQ-LPGEAGQDPSLKPSQGGTALLADPP 61
G+ G+P LPGEAG P P GG + PP
Sbjct: 687 GSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPP 722
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 28.5 bits (62), Expect = 3.4
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 27 GTQGLPENHQ-LPGEAGQDPSLKPSQGGTALLADPP 61
G+ G+P LPGEAG P P GG + PP
Sbjct: 696 GSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPP 731
>gi|51466913 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 28.5 bits (62), Expect = 3.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 18 RVRDASTSQGTQGLPENHQLPGEAGQ-DPSLKPSQGGTALLADPPVSDFRPPQLLTCL 74
++ +++ G G PEN Q P A + PS P Q G A P D +PP CL
Sbjct: 314 QIPESAIQGGELGAPENLQPPPAATELGPSTSP-QMGRRTPAQVPSVDRQPPHSTPCL 370
>gi|51466907 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 28.5 bits (62), Expect = 3.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 18 RVRDASTSQGTQGLPENHQLPGEAGQ-DPSLKPSQGGTALLADPPVSDFRPPQLLTCL 74
++ +++ G G PEN Q P A + PS P Q G A P D +PP CL
Sbjct: 314 QIPESAIQGGELGAPENLQPPPAATELGPSTSP-QMGRRTPAQVPSIDRQPPHSTPCL 370
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 28.5 bits (62), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 45 PSLKPSQGGTALLADPPVSDFRPP-QLLTCLGGPW 78
PSL S+ G++ DPP+ D +PP L + PW
Sbjct: 1098 PSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPW 1132
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 28.5 bits (62), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 45 PSLKPSQGGTALLADPPVSDFRPP-QLLTCLGGPW 78
PSL S+ G++ DPP+ D +PP L + PW
Sbjct: 1098 PSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPW 1132
>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
Length = 303
Score = 28.5 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 115 GREDNSVSMTGSDPVTKQSAKDSPPLPLELGKEKEKPKL 153
GR ++GS P+ + ++PP L KEK K KL
Sbjct: 23 GRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEKL 61
>gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens]
Length = 642
Score = 28.5 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 7 GEGSRVKESEIRVRDASTSQGTQGLPENHQLPGEAGQDPSLKPSQ 51
GE + VKE+ + A S T P H+ E D L+P++
Sbjct: 136 GESTWVKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNK 180
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 28.1 bits (61), Expect = 4.5
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 14 ESEIRVRDASTSQGTQ---GLPENHQLPGEAGQDPSLKPSQGGTALLADPPVSDFRPPQL 70
++E R R + S+ + GL + LP DP P G PP S PP+
Sbjct: 49 KAEPRPRSSRLSRRSSVDLGLLSSWSLPASPAPDPPDPPDSAGPGPARSPPPSSKEPPEG 108
Query: 71 LTCLGGP 77
G P
Sbjct: 109 TWTEGAP 115
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 28.1 bits (61), Expect = 4.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 135 KDSPPLPLELGKEKEKPKLHLAEPGLSLSSESRDAPRGR 173
K PPLP E +P A P + ESR+ PRGR
Sbjct: 195 KSQPPLPQETAAPAPQPG-PTAPPARPPAYESREGPRGR 232
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,925,522
Number of Sequences: 37866
Number of extensions: 483464
Number of successful extensions: 1479
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1445
Number of HSP's gapped (non-prelim): 80
length of query: 184
length of database: 18,247,518
effective HSP length: 96
effective length of query: 88
effective length of database: 14,612,382
effective search space: 1285889616
effective search space used: 1285889616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.