Guide to the Human Genome
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Name: C10orf119 Sequence: fasta or formatted (642aa) NCBI GI: 13376243
Description:

chromosome 10 open reading frame 119

Referenced in:

Replication Proteins
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         32           2
 C cysteine            2.3         15           1
 D aspartate           5.5         35           4
 E glutamate           6.9         44           2
 F phenylalanine       3.9         25           2
 G glycine             4.2         27           2
 H histidine           3.0         19           1
 I isoleucine          3.9         25           2
 K lysine              4.8         31           2
 L leucine            12.8         82           2
 M methionine          2.0         13           1
 N asparagine          5.8         37           2
 P proline             6.4         41           2
 Q glutamine           5.5         35           3
 R arginine            4.7         30           2
 S serine              7.3         47           2
 T threonine           5.1         33           2
 V valine              6.7         43           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.1         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 10 open reading frame 119 
NKX1-1                0.005   PREDICTED: NK1 homeobox 1 
USP20                 0.005   ubiquitin specific protease 20 
USP20                 0.005   ubiquitin specific protease 20 
USP20                 0.005   ubiquitin specific protease 20 
HNF4A                 0.005   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.005   hepatocyte nuclear factor 4 alpha isoform b 
HNF4A                 0.005   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.005   hepatocyte nuclear factor 4 alpha isoform d 
RUSC1                 0.005   RUN and SH3 domain containing 1 isoform c 
RUSC1                 0.005   RUN and SH3 domain containing 1 isoform a 
RUSC1                 0.005   RUN and SH3 domain containing 1 isoform d 
COASY                 0.005   coenzyme A synthase isoform c 
COASY                 0.005   coenzyme A synthase isoform a 
COASY                 0.005   coenzyme A synthase isoform a 
COASY                 0.005   coenzyme A synthase isoform a 
PDP1                  0.004   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.004   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.004   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.004   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.004   pyruvate dehyrogenase phosphatase catalytic subunit...
TERF2                 0.004   telomeric repeat binding factor 2 
SEMA3C                0.004   semaphorin 3C 
FMN1                  0.004   formin 1 
LCOR                  0.004   ligand dependent nuclear receptor corepressor 
IL21R                 0.004   interleukin 21 receptor precursor 
GATA6                 0.004   GATA binding protein 6 
IL21R                 0.004   interleukin 21 receptor precursor 
IL21R                 0.004   interleukin 21 receptor precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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