Guide to the Human Genome
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Name: FAM90A8 Sequence: fasta or formatted (464aa) NCBI GI: 51466907
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         49           3
 C cysteine            2.2         10           1
 D aspartate           3.4         16           1
 E glutamate           5.6         26           2
 F phenylalanine       1.7          8           1
 G glycine             7.1         33           2
 H histidine           3.0         14           2
 I isoleucine          1.1          5           1
 K lysine              6.5         30           2
 L leucine             8.4         39           2
 M methionine          1.7          8           2
 N asparagine          1.9          9           1
 P proline            13.6         63           3
 Q glutamine           5.6         26           2
 R arginine            7.8         36           2
 S serine             10.6         49           5
 T threonine           3.9         18           2
 V valine              4.3         20           2
 W tryptophan          0.9          4           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FAM90A9               0.988   PREDICTED: hypothetical protein 
FAM90A13              0.982   PREDICTED: hypothetical protein 
FAM90A19              0.982   PREDICTED: hypothetical protein 
FAM90A18              0.982   PREDICTED: hypothetical protein LOC441326 
FAM90A15              0.978   PREDICTED: hypothetical protein LOC389630 
FAM90A10              0.977   PREDICTED: hypothetical protein LOC441328 
FAM90A14              0.975   PREDICTED: hypothetical protein 
FAM90A12              0.974   PREDICTED: hypothetical protein 
FAM90A5               0.973   PREDICTED: hypothetical protein 
FAM90A3               0.973   PREDICTED: hypothetical protein 
FAM90A7               0.972   hypothetical protein LOC441317 
FAM90A20              0.937   PREDICTED: hypothetical protein 
FAM90A20              0.933   PREDICTED: hypothetical protein 
LOC100287045          0.927   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.927   PREDICTED: hypothetical protein XP_002342468 isofor...
FAM90A1               0.909   hypothetical protein LOC55138 
LOC646508             0.218   PREDICTED: hypothetical LOC646508 
LOC646508             0.218   PREDICTED: hypothetical LOC646508 
LOC646508             0.162   PREDICTED: hypothetical LOC646508 
FLJ22184              0.028   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
ATN1                  0.027   atrophin-1 
ATN1                  0.027   atrophin-1 
MLL2                  0.025   myeloid/lymphoid or mixed-lineage leukemia 2 
PCLO                  0.024   piccolo isoform 2 
PCLO                  0.024   piccolo isoform 1 
NACA                  0.024   nascent polypeptide-associated complex alpha subuni...
PRB1                  0.024   proline-rich protein BstNI subfamily 1 isoform 1 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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