Search of human proteins with 108389176

Search of human proteins with 108389176

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|108389176 tRNA splicing endonuclease 54 homolog [Homo
sapiens]
         (526 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|108389176 tRNA splicing endonuclease 54 homolog [Homo sapiens]    1070   0.0  
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    44   5e-04
gi|239754474 PREDICTED: similar to mucin [Homo sapiens]                39   0.009
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]           39   0.015
gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchan...    38   0.020
gi|61102725 la related protein isoform 2 [Homo sapiens]                37   0.034
gi|239835767 developmental pluripotency associated 2 [Homo sapiens]    37   0.044
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]            36   0.099
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]            36   0.099
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]            36   0.099
gi|50428940 mediator complex subunit 25 [Homo sapiens]                 36   0.099
gi|239752992 PREDICTED: hypothetical protein XP_002345322 [Homo ...    35   0.13 
gi|239747550 PREDICTED: hypothetical protein XP_002347647 [Homo ...    35   0.13 
gi|239741424 PREDICTED: hypothetical protein XP_002342197 [Homo ...    35   0.13 
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo...    35   0.13 
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    35   0.17 
gi|150170670 piccolo isoform 2 [Homo sapiens]                          35   0.17 
gi|150378539 piccolo isoform 1 [Homo sapiens]                          35   0.17 
gi|50345997 E1A binding protein p300 [Homo sapiens]                    35   0.22 
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]          35   0.22 
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]         34   0.29 
gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Ho...    34   0.29 
gi|214831495 hypothetical protein LOC285679 [Homo sapiens]             34   0.29 
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        34   0.29 
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H...    34   0.38 
gi|113419362 PREDICTED: hypothetical protein [Homo sapiens]            34   0.38 
gi|113418886 PREDICTED: hypothetical protein [Homo sapiens]            34   0.38 
gi|113419893 PREDICTED: hypothetical protein [Homo sapiens]            34   0.38 
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]        34   0.38 
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]        34   0.38 

>gi|108389176 tRNA splicing endonuclease 54 homolog [Homo sapiens]
          Length = 526

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 526/526 (100%), Positives = 526/526 (100%)

Query: 1   MEPEPEPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCRE 60
           MEPEPEPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCRE
Sbjct: 1   MEPEPEPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRRCRE 60

Query: 61  ELWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL 120
           ELWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL
Sbjct: 61  ELWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL 120

Query: 121 LECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPY 180
           LECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPY
Sbjct: 121 LECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPY 180

Query: 181 ERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQC 240
           ERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQC
Sbjct: 181 ERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQC 240

Query: 241 PEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQ 300
           PEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQ
Sbjct: 241 PEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQ 300

Query: 301 ISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAA 360
           ISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAA
Sbjct: 301 ISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAA 360

Query: 361 QFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLLSPGQASSPAVV 420
           QFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLLSPGQASSPAVV
Sbjct: 361 QFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQRRAPHLWGQPVTPLLSPGQASSPAVV 420

Query: 421 LQHISVLQTTHLPDGGARLLEKSGGLEIIFDVYQADAVATFRKNNPGKPYARMCISGFDE 480
           LQHISVLQTTHLPDGGARLLEKSGGLEIIFDVYQADAVATFRKNNPGKPYARMCISGFDE
Sbjct: 421 LQHISVLQTTHLPDGGARLLEKSGGLEIIFDVYQADAVATFRKNNPGKPYARMCISGFDE 480

Query: 481 PVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPQDVGH 526
           PVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPQDVGH
Sbjct: 481 PVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPQDVGH 526


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 19/198 (9%)

Query: 197 DGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGG 256
           + K   S++ P   ++  +   N  + +S A +SP P   PS  P    +E  P + P  
Sbjct: 513 EAKESPSAAGPEDKSQSKRRASN--EKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTD 570

Query: 257 PFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLR 316
              L     P+P P       +  + R E     A KRR   EQ        + +   L+
Sbjct: 571 AAVLTSPPAPAP-PVTPSKPMAGTTDREEATRLLAEKRRQAREQ-----REREEQERRLQ 624

Query: 317 APAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAAQFQEDVNADPEVQRCS 376
           A   + +      RE +A +      +R+ +  RRE +   E AQ +++     E +R  
Sbjct: 625 AERDKRMREEQLAREAEARA------EREAEARRREEQEAREKAQAEQE-----EQERLQ 673

Query: 377 SWREYKELLQRRQVQRSQ 394
             +E  E   R + +R +
Sbjct: 674 KQKEEAEARSREEAERQR 691



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 31/183 (16%)

Query: 222 QPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQL-------LGSLGPSPGPAREG 274
           +P      SPPP    +  P+  P     MK      QL        G +GP P P +E 
Sbjct: 26  RPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPPQE- 84

Query: 275 VGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDA 334
                ES  +E       K R        P  A   R +    P+P  +PA      +D+
Sbjct: 85  -----ESPSSE------AKSRGPTPPAMGPRDARPPRRS--SQPSPTAVPA------SDS 125

Query: 335 ESWCQKLNQ--RKEKLSRREREHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQR 392
               Q++ +   + KL++  RE  A+    ++ V  + E ++  + RE K+L +RR+   
Sbjct: 126 PPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKE-EKAKALRE-KQLQERRRRLE 183

Query: 393 SQR 395
            QR
Sbjct: 184 EQR 186



 Score = 32.7 bits (73), Expect = 0.84
 Identities = 56/246 (22%), Positives = 85/246 (34%), Gaps = 50/246 (20%)

Query: 199 KRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPF 258
           K K+         K A A + SL+ +    +SP      S   E  P+  +    P   +
Sbjct: 415 KEKKDKERENEKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSW 474

Query: 259 QLLGSLGPSPGPAR---------EGVGCSWESGR------AENGVTGAG-------KRRW 296
               S  PSPGP            G   S   GR      A+   + AG       KRR 
Sbjct: 475 HRPASPCPSPGPGHTLPPKPPSPRGTTAS-PKGRVRRKEEAKESPSAAGPEDKSQSKRRA 533

Query: 297 NFEQIS------------FPNMASDSRH-------------TLLRAPAPELLPANVAGRE 331
           + E+ S             P  A   +              T   APAP + P+      
Sbjct: 534 SNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGT 593

Query: 332 TDAESWCQKL-NQRKEKLSRREREHHAEAAQFQEDVN-ADPEVQRCSSWREYKELLQRRQ 389
           TD E   + L  +R++   +RERE      Q + D    + ++ R +  R  +E   RR+
Sbjct: 594 TDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEARAEREAEARRR 653

Query: 390 VQRSQR 395
            ++  R
Sbjct: 654 EEQEAR 659


>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
          Length = 417

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 196 GDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGP- 254
           G G+R+ S SSP +  ++A+  +        AA++P P S+  +  + KPQ+  P + P 
Sbjct: 223 GTGQRRGSRSSPSADQQRAQDREEE------AAAAPAPTSRGHRTEKRKPQQ--PQRRPA 274

Query: 255 GGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKR 294
           GG  Q  GS G SP   ++G     E   A    T +G R
Sbjct: 275 GGTGQRRGS-GYSPSADQQGAQDREEEAAAAPAPTSSGHR 313



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 10/100 (10%)

Query: 196 GDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGP- 254
           G G+R+ S SSP +  ++A+  +        AA++P P S+  +  + K Q+  P + P 
Sbjct: 117 GTGQRRGSRSSPSADQQRAQDREEE------AAAAPVPTSRGHRTEKRKRQQ--PQRRPA 168

Query: 255 GGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKR 294
           GG  Q  GS G SP   ++G     E   A    T  G R
Sbjct: 169 GGTGQRRGS-GSSPSADQQGAQDREEEAAAAPAPTSRGHR 207



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 196 GDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPG 255
           G G+R+ S SSP +  + A+  +        AA++P P S+  +  + KPQ+    +  G
Sbjct: 170 GTGQRRGSGSSPSADQQGAQDREEE------AAAAPAPTSRGHRTEKRKPQQPQ-CRPAG 222

Query: 256 GPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKR 294
           G  Q  GS   SP   ++      E   A    T  G R
Sbjct: 223 GTGQRRGSRS-SPSADQQRAQDREEEAAAAPAPTSRGHR 260


>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
          Length = 1006

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 201 KRSSSSPRSINKKAKALDNSLQPKSLAAS------SPPPCSQPSQCPEEKPQESSPMKGP 254
           +R  S+PR I +    ++   + + + AS      + P    P       P    P   P
Sbjct: 3   RRKQSNPRQIKRSLGDMEAREEVQLVGASHMEQKATAPEAPSPPSADVNSPPPLPPPTSP 62

Query: 255 GGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRR 295
           GGP +L G   P P P  E  G  W        V   G+RR
Sbjct: 63  GGPKELEGQ-EPEPRPTEEEPGSPWSGPDELEPVVQDGQRR 102


>gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchange
           factor 4 [Homo sapiens]
          Length = 368

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 23/110 (20%)

Query: 227 AASSPPPCSQPS---------------QCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPA 271
           AA++PPP +QPS               QCP E   ++S   G         S G SPG  
Sbjct: 196 AAAAPPPPAQPSPSLWLELGPACVRAQQCPSESSGQTSGDLGTSSS----SSAGLSPGSD 251

Query: 272 RE--GVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLRAPA 319
            +  GV C    G    G+ GA  R W+ E +       D+      AP+
Sbjct: 252 SDSSGVVCGGRGGNG--GMRGAVSRSWSLESLRSATAGKDAAIPAPHAPS 299


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score = 37.4 bits (85), Expect = 0.034
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 190 VQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESS 249
           +Q  E G   RK+   +P    +         +P   A    PPC++P +    + +  S
Sbjct: 16  LQAEEHGGLVRKKPPPAPEGKGEPGPNDVRGGEPDGSARRPRPPCAKPHKEGTGQQERES 75

Query: 250 PMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKR 294
           P      P QL G+ GP+     EG G     G A  G  GAG+R
Sbjct: 76  PR-----PLQLPGAEGPAISDGEEGGGEPGAGGGAA-GAAGAGRR 114


>gi|239835767 developmental pluripotency associated 2 [Homo sapiens]
          Length = 298

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 299 EQISFPNMASDSRHTLLRAPAPELLPA-NVAGRETDAESWCQKLN-----QRKEKLSRRE 352
           EQ + P  A   R  +   P P +LP  N   R+T    WCQ+L      ++ E   R  
Sbjct: 68  EQFTAPQKA---RCKIPALPLPTILPPINKVCRDT-LRDWCQQLGLSTNGKKIEVYLRLH 123

Query: 353 REHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRS 393
           R  + E  Q   +++ +  +QRCS  R+ K + +R ++QRS
Sbjct: 124 RHAYPEQRQDMPEMSQETRLQRCS--RKRKAVTKRARLQRS 162


>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 625

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 57/224 (25%), Positives = 82/224 (36%), Gaps = 42/224 (18%)

Query: 202 RSSSSPRSINKKAKALDNSLQPKSLAASS------------PPPCSQPSQCPEEKPQESS 249
           R+     S++  ++  + +L  +S A+SS            PP  S  + CP      SS
Sbjct: 240 RTGRKSHSLDSLSRRREGALSSESGASSSSYSGESLRELRWPPRASARNSCPAGSA--SS 297

Query: 250 PMKGPGGPFQL-----------LGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNF 298
               PG P  L           LG L  SP  A+  V       RAE G+ G  +R    
Sbjct: 298 TTNAPGRPSALTLVPITGRSFSLGDLSHSPQTAQH-VERIVRQVRAERGLRGVPERD--- 353

Query: 299 EQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAE 358
            +I+   +A      LL           +  R      W  +    K++  R ERE    
Sbjct: 354 RKIAALMLARHQEELLL-----------LEQRAAAHGQWELQRVHAKQRREREEREKQRA 402

Query: 359 AAQFQEDVNADPEVQRCSSWREYKELLQRRQVQ--RSQRRAPHL 400
             Q +    A  E +R    RE +E  +RRQ Q  RS+ R   L
Sbjct: 403 LEQGRRAWAAQVEERRGRRGREEREAARRRQRQYERSEERRREL 446


>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 627

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 57/224 (25%), Positives = 82/224 (36%), Gaps = 42/224 (18%)

Query: 202 RSSSSPRSINKKAKALDNSLQPKSLAASS------------PPPCSQPSQCPEEKPQESS 249
           R+     S++  ++  + +L  +S A+SS            PP  S  + CP      SS
Sbjct: 242 RTGRKSHSLDSLSRRREGALSSESGASSSSYSGESLRELRWPPRASARNSCPAGSA--SS 299

Query: 250 PMKGPGGPFQL-----------LGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNF 298
               PG P  L           LG L  SP  A+  V       RAE G+ G  +R    
Sbjct: 300 TTNAPGRPSALTLVPITGRSFSLGDLSHSPQTAQH-VERIVRQVRAERGLRGVPERD--- 355

Query: 299 EQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAE 358
            +I+   +A      LL           +  R      W  +    K++  R ERE    
Sbjct: 356 RKIAALMLARHQEELLL-----------LEQRAAAHGQWELQRVHAKQRREREEREKQRA 404

Query: 359 AAQFQEDVNADPEVQRCSSWREYKELLQRRQVQ--RSQRRAPHL 400
             Q +    A  E +R    RE +E  +RRQ Q  RS+ R   L
Sbjct: 405 LEQGRRAWAAQVEERRGRRGREEREAARRRQRQYERSEERRREL 448


>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 627

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 57/224 (25%), Positives = 82/224 (36%), Gaps = 42/224 (18%)

Query: 202 RSSSSPRSINKKAKALDNSLQPKSLAASS------------PPPCSQPSQCPEEKPQESS 249
           R+     S++  ++  + +L  +S A+SS            PP  S  + CP      SS
Sbjct: 242 RTGRKSHSLDSLSRRREGALSSESGASSSSYSGESLRELRWPPRASARNSCPAGSA--SS 299

Query: 250 PMKGPGGPFQL-----------LGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNF 298
               PG P  L           LG L  SP  A+  V       RAE G+ G  +R    
Sbjct: 300 TTNAPGRPSALTLVPITGRSFSLGDLSHSPQTAQH-VERIVRQVRAERGLRGVPERD--- 355

Query: 299 EQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAE 358
            +I+   +A      LL           +  R      W  +    K++  R ERE    
Sbjct: 356 RKIAALMLARHQEELLL-----------LEQRAAAHGQWELQRVHAKQRREREEREKQRA 404

Query: 359 AAQFQEDVNADPEVQRCSSWREYKELLQRRQVQ--RSQRRAPHL 400
             Q +    A  E +R    RE +E  +RRQ Q  RS+ R   L
Sbjct: 405 LEQGRRAWAAQVEERRGRRGREEREAARRRQRQYERSEERRREL 448


>gi|50428940 mediator complex subunit 25 [Homo sapiens]
          Length = 747

 Score = 35.8 bits (81), Expect = 0.099
 Identities = 37/127 (29%), Positives = 47/127 (37%), Gaps = 12/127 (9%)

Query: 221 LQPKSLAASSPPPCSQPSQCPEEKPQES-SPMKGPGGPFQLLGSLGP----SPGPAREGV 275
           L P    A  PPP SQPS      P    +P   PG P  + G++ P     P PA+ G 
Sbjct: 328 LPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAP-SMAGTVAPGGVSGPSPAQLGA 386

Query: 276 GCSWESGRAENGVTG-AGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDA 334
                     N +   +G   W  +    P  AS   +T L    P  +  N  G     
Sbjct: 387 PALGGQQSVSNKLLAWSGVLEWQEK----PKPASVDANTKLTRSLPCQVYVN-HGENLKT 441

Query: 335 ESWCQKL 341
           E W QKL
Sbjct: 442 EQWPQKL 448


>gi|239752992 PREDICTED: hypothetical protein XP_002345322 [Homo
           sapiens]
          Length = 277

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 15/114 (13%)

Query: 178 SPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAAS--SPPPCS 235
           SP     + +  +    +G           R IN K+     SL+P   AAS  S P CS
Sbjct: 146 SPSRTSFHGETQIPGAPEGRKPPSCPGKDQRDINYKSSGTPRSLEPDEGAASWASSPVCS 205

Query: 236 -----QPSQCP-----EEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSW 279
                +PS  P         Q+S P+     PFQ        PGP  +G   SW
Sbjct: 206 PVQGKRPSPSPGAISFSSVHQQSQPVTATVAPFQYRLQTDQKPGPLSQG---SW 256


>gi|239747550 PREDICTED: hypothetical protein XP_002347647 [Homo
           sapiens]
          Length = 277

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 15/114 (13%)

Query: 178 SPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAAS--SPPPCS 235
           SP     + +  +    +G           R IN K+     SL+P   AAS  S P CS
Sbjct: 146 SPSRTSFHGETQIPGAPEGRKPPSCPGKDQRDINYKSSGTPRSLEPDEGAASWASSPVCS 205

Query: 236 -----QPSQCP-----EEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSW 279
                +PS  P         Q+S P+     PFQ        PGP  +G   SW
Sbjct: 206 PVQGKRPSPSPGAISFSSVHQQSQPVTATVAPFQYRLQTDQKPGPLSQG---SW 256


>gi|239741424 PREDICTED: hypothetical protein XP_002342197 [Homo
           sapiens]
          Length = 277

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 15/114 (13%)

Query: 178 SPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAAS--SPPPCS 235
           SP     + +  +    +G           R IN K+     SL+P   AAS  S P CS
Sbjct: 146 SPSRTSFHGETQIPGAPEGRKPPSCPGKDQRDINYKSSGTPRSLEPDEGAASWASSPVCS 205

Query: 236 -----QPSQCP-----EEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSW 279
                +PS  P         Q+S P+     PFQ        PGP  +G   SW
Sbjct: 206 PVQGKRPSPSPGAISFSSVHQQSQPVTATVAPFQYRLQTDQKPGPLSQG---SW 256


>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
            sapiens]
          Length = 1905

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 58/232 (25%), Positives = 80/232 (34%), Gaps = 29/232 (12%)

Query: 105  SEQGRQRLHPEEALYL-----------LECGSIHLFHQDLPLSIQEAYQLLLTDHTVTFL 153
            SEQ + +L PE  L+            L+     L  +  PLS+ ++   L     +++L
Sbjct: 1214 SEQPQAQLQPEAQLHAPAQPQPQLQLQLQSHKGFLEQEGSPLSLGQSQHDLSQSAFLSWL 1273

Query: 154  QYQVFSHLKRLGYVVRRFQPSSVLSPYERQLNLD-ASVQHLEDGDGKRKRSSSSPRSI-- 210
              Q  SH   L         SSVL+P      LD A  Q  E+ +     SS  P+++  
Sbjct: 1274 S-QTQSHSSLLS--------SSVLTPDSSPGKLDPAPSQPPEEPEPDEAESSPDPQALWF 1324

Query: 211  NKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGP 270
            N  A+   N+      A S   P   P Q    KP        P  P Q   +      P
Sbjct: 1325 NISAQMPCNAAPTPPPAVSEDQPTPSPQQLASSKPMNRPSAANPCSPVQFSSTPLAGLAP 1384

Query: 271  AREGVGCSWESGRAENGVTGAG--KRRWNFEQISFPNMASDSRHTLLRAPAP 320
             R     + + G      TG G  KRR       F  M       L   P P
Sbjct: 1385 KRR----AGDPGEMPQSPTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVP 1432


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 204 SSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQLLGS 263
           ++ PR +   A A   +  P   +A  P P   P+  P   P  S+   G GGP    G 
Sbjct: 13  AAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGST---GTGGPGVGSGG 69

Query: 264 LGPSPGPAREGVGCSWESGRAENGVTG 290
            G    PAR G+     + + +  V G
Sbjct: 70  AGSGGDPARPGLSQQQRASQRKAQVRG 96


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 57/230 (24%), Positives = 85/230 (36%), Gaps = 19/230 (8%)

Query: 152  FLQYQVFSHLKRLGYVVRRFQPSSVLSPYE-----RQLNLDASVQHLEDGDGKRKRSSSS 206
            F+   + + L  LG  +R         PY      R  +  +SV  L D   KR  SSSS
Sbjct: 4255 FMGSSLGTGLGTLGNTIRSALQDEADKPYSSGSRSRPSSRPSSVYGL-DLSIKRDSSSSS 4313

Query: 207  PRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKP------QESSPMKGPGGPFQL 260
             R   ++A+ALD S    S +A + P     SQ     P      +E SP+   G P  +
Sbjct: 4314 LRLKAQEAEALDVSFSHASSSARTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGM 4373

Query: 261  ----LGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLR 316
                 G L P     R+  G S      +  +    + R     I+F  +  D +H +  
Sbjct: 4374 ARAAAGPLPPISADTRDQFGSSHSLPEVQQHMREESRTRGYDRDIAF--IMDDFQHAMSD 4431

Query: 317  APAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAAQFQEDV 366
            + A  L        +   ES  +  +    KL  R   H    +Q QE +
Sbjct: 4432 SEAYHLRREETDWFDKPRESRLENGHGLDRKLPER-LVHSRPLSQHQEQI 4480



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 201 KRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQ------PSQCPEEKPQESSPMKGP 254
           +R +S P++  K+A  +       SL + S PP  Q      P+Q P  +  +  P K P
Sbjct: 275 QRDASRPQT--KQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPP 332

Query: 255 GGPFQLLGSLGPSPGPAREGV 275
             P  L   L   PG  +  V
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPV 353


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 57/230 (24%), Positives = 85/230 (36%), Gaps = 19/230 (8%)

Query: 152  FLQYQVFSHLKRLGYVVRRFQPSSVLSPYE-----RQLNLDASVQHLEDGDGKRKRSSSS 206
            F+   + + L  LG  +R         PY      R  +  +SV  L D   KR  SSSS
Sbjct: 4255 FMGSSLGTGLGTLGNTIRSALQDEADKPYSSGSRSRPSSRPSSVYGL-DLSIKRDSSSSS 4313

Query: 207  PRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKP------QESSPMKGPGGPFQL 260
             R   ++A+ALD S    S +A + P     SQ     P      +E SP+   G P  +
Sbjct: 4314 LRLKAQEAEALDVSFSHASSSARTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGM 4373

Query: 261  ----LGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHTLLR 316
                 G L P     R+  G S      +  +    + R     I+F  +  D +H +  
Sbjct: 4374 ARAAAGPLPPISADTRDQFGSSHSLPEVQQHMREESRTRGYDRDIAF--IMDDFQHAMSD 4431

Query: 317  APAPELLPANVAGRETDAESWCQKLNQRKEKLSRREREHHAEAAQFQEDV 366
            + A  L        +   ES  +  +    KL  R   H    +Q QE +
Sbjct: 4432 SEAYHLRREETDWFDKPRESRLENGHGLDRKLPER-LVHSRPLSQHQEQI 4480



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)

Query: 201 KRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQ------PSQCPEEKPQESSPMKGP 254
           +R +S P++  K+A  +       SL + S PP  Q      P+Q P  +  +  P K P
Sbjct: 275 QRDASRPQT--KQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPP 332

Query: 255 GGPFQLLGSLGPSPGPAREGV 275
             P  L   L   PG  +  V
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPV 353


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 10/149 (6%)

Query: 183 QLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSL--QPKSLAASSPPPCSQPSQC 240
           +L    S  +L  G G   +  +S    +     L NS+   P + A  + P     +  
Sbjct: 83  ELLRSGSSPNLNMGVGGPGQVMASQAQQSSPGLGLINSMVKSPMTQAGLTSPNMGMGTSG 142

Query: 241 PEEKPQES-----SPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRR 295
           P + P +S     SP+  P        + G +PG    G G      +  NG  GAG+ R
Sbjct: 143 PNQGPTQSTGMMNSPVNQPAMGMNTGMNAGMNPGMLAAGNGQGIMPNQVMNGSIGAGRGR 202

Query: 296 WNFEQISFPNMASDSRHTLLRAPAPELLP 324
            N +   +PN    S   LL  P  +  P
Sbjct: 203 QNMQ---YPNPGMGSAGNLLTEPLQQGSP 228


>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
          Length = 796

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 35/126 (27%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 223 PKSLAASSPPPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSWESG 282
           P S A   PPP   P       P   +P   PGGP  L G+  P           S  S 
Sbjct: 265 PASAAVLPPPP---PHALGSRGPPTPAPPGAPGGPACLGGT--PGVSATSSSASSSTSSS 319

Query: 283 RAENGVTGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDAESWCQKLN 342
            AE GV   GKR  +   +S  +   + +     A A   L  ++  R   AE W  K  
Sbjct: 320 VAEVGVGAGGKRPGS---VSSTDQERELKEKQRNAEALAELSESLRNR---AEEWASKPK 373

Query: 343 QRKEKL 348
             ++ L
Sbjct: 374 MVRDTL 379


>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
          Length = 1962

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 204 SSSPRSINKKAK-ALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKGP 254
           +S+  S N  AK A  N+ QP+       P   QP Q P+ +PQ+  P + P
Sbjct: 75  TSTATSTNNNAKRATANNQQPQQQQQQQQPQQQQPQQQPQPQPQQQQPQQQP 126



 Score = 29.3 bits (64), Expect = 9.2
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 12/112 (10%)

Query: 178  SPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQP 237
            S Y   L+  A      + D K   S  S  + +   +     L PK++ A S PP    
Sbjct: 1679 SNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLT 1738

Query: 238  SQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPAREGVGCSW---ESGRAEN 286
             Q P     ++SP++  GG        G S   AR   G SW    SGR  N
Sbjct: 1739 GQKPPLSTWDNSPLRIGGG-------WGNS--DARYTPGSSWGESSSGRITN 1781


>gi|45827809 mitogen-activated protein kinase kinase kinase 6 [Homo
           sapiens]
          Length = 1288

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 166 YVVRRFQPSSVLSPYERQLNLDASVQHLEDGDGKRKRSSSSPRSINKKAKALDNSLQP-- 223
           +++R F+P   L    + L  D  +Q      GKR RS SSPR   + + A   S  P  
Sbjct: 882 FLLRTFEPDPRLRASAQTLLGDPFLQ-----PGKRSRSPSSPRHAPRPSDAPSASPTPSA 936

Query: 224 KSLAASSPPPCSQ-PSQCPEEKPQ 246
            S   S   PC Q PSQ P   P+
Sbjct: 937 NSTTQSQTFPCPQAPSQHPPSPPK 960


>gi|214831495 hypothetical protein LOC285679 [Homo sapiens]
          Length = 277

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 26/180 (14%)

Query: 141 YQLLLTD----HTVTFLQYQVFSHLKRLG---YVVRRFQPSSVLSPYERQLNLDASVQHL 193
           Y++LL +       TFL  +    L R G   ++ R+ +P  V  P        A  ++ 
Sbjct: 95  YRILLKELENLEIYTFLSKKCLKKLSREGSSHHLPRQVRPGPVYKP--------APARNH 146

Query: 194 EDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQES-SPMK 252
               G+ K S +S   ++ +A     +  P S+  +S      PS     KP+E   P+K
Sbjct: 147 RPRGGRGKASPTSFH-VSPRAPLAPLASMPSSVPKTSVESLGSPSSLSSSKPREPLCPLK 205

Query: 253 GPGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRH 312
            P        +L P+P  + E +G +  +GR   G          F Q    N A   RH
Sbjct: 206 HPSHQ-PPASTLSPNPTSSTESLGETPHAGRWRQGS--------RFPQPGCANAAGRIRH 256


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 197 DGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEE------KPQESSP 250
           DG RK  S   R ++    A   S   + ++ +  PP  QP   P E       P    P
Sbjct: 507 DGLRKIQSMGVRVMDTNWVARRGSSAGRKVSCA--PPSMQPPAPPAELAAPLPSPLPEQP 564

Query: 251 MKGPGGPFQLLGSLGPSPGPAREGVGCSWE--SGRAENGVTGAGK 293
           +  P  P      LG  PGP R     S E   G A+ G  G+ +
Sbjct: 565 LDSPAAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQ 609


>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
           sapiens]
          Length = 1512

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 25/164 (15%)

Query: 194 EDGDGKRKRSSSSPRSINKKAKALDNSLQPKSLAASSPPPCSQPSQCPEEKPQESSPMKG 253
           E G G R+R+    R + K      + L  + L  ++ PP S  S  PE  P +++   G
Sbjct: 46  EAGSGGRERADWRRRQLRKVRSVELDQLPEQPLFLAASPPASSTSPSPE--PADAA---G 100

Query: 254 PGGPFQLLGSLGPSPGPAREGVGCSWESGRAENGVTGAGKRRWNFEQISFPNMASDSRHT 313
            G  FQ +    P    +R G   +      ++G              S P  A      
Sbjct: 101 SGTGFQPVAVPPPHGAASRGGAHLTESVAAPDSGA-------------SSPAAAEPGEK- 146

Query: 314 LLRAPAPELLPANV-AGRETDAESWCQ---KLNQRKEKLSRRER 353
             RAPA E  PA   AGRE + +   +   K++ R E+   RE+
Sbjct: 147 --RAPAAEPSPAAAPAGREMENKETLKGLHKMDDRPEERMIREK 188


>gi|113419362 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 230 SPPPCS-QPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPA 271
           +PPPC  +P     + P+E  P  GPG P     +L   PG A
Sbjct: 4   APPPCGPRPGPRSHKLPRECFPASGPGSPVLCAAALSGGPGRA 46


>gi|113418886 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 230 SPPPCS-QPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPA 271
           +PPPC  +P     + P+E  P  GPG P     +L   PG A
Sbjct: 4   APPPCGPRPGPRSHKLPRECFPASGPGSPVLCAAALSGGPGRA 46


>gi|113419893 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 230 SPPPCS-QPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGPA 271
           +PPPC  +P     + P+E  P  GPG P     +L   PG A
Sbjct: 4   APPPCGPRPGPRSHKLPRECFPASGPGSPVLCAAALSGGPGRA 46


>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
          Length = 1337

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 17/186 (9%)

Query: 232 PPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGP---AREGVGCSWESGRAENGV 288
           PP   P  CP   P   +P      PF +     P P P     + V   +  G + +  
Sbjct: 118 PPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNF 177

Query: 289 TGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDA----------ESWC 338
                  +     SF   A++S     R   P  LP   + R +                
Sbjct: 178 PPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHS 237

Query: 339 QKLNQRKEKLSRRER----EHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQ 394
               +R   L RRER    +   + ++++ D +      R  S+   +E  + R   R  
Sbjct: 238 HGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDN 297

Query: 395 RRAPHL 400
           RR+P L
Sbjct: 298 RRSPSL 303


>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
          Length = 1374

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 17/186 (9%)

Query: 232 PPCSQPSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGP---AREGVGCSWESGRAENGV 288
           PP   P  CP   P   +P      PF +     P P P     + V   +  G + +  
Sbjct: 118 PPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNF 177

Query: 289 TGAGKRRWNFEQISFPNMASDSRHTLLRAPAPELLPANVAGRETDA----------ESWC 338
                  +     SF   A++S     R   P  LP   + R +                
Sbjct: 178 PPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHS 237

Query: 339 QKLNQRKEKLSRRER----EHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRSQ 394
               +R   L RRER    +   + ++++ D +      R  S+   +E  + R   R  
Sbjct: 238 HGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDN 297

Query: 395 RRAPHL 400
           RR+P L
Sbjct: 298 RRSPSL 303


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,476,247
Number of Sequences: 37866
Number of extensions: 1355509
Number of successful extensions: 7852
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 7416
Number of HSP's gapped (non-prelim): 652
length of query: 526
length of database: 18,247,518
effective HSP length: 107
effective length of query: 419
effective length of database: 14,195,856
effective search space: 5948063664
effective search space used: 5948063664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.