Search of human proteins with 10835103

Search of human proteins with 10835103

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|10835103 interferon, alpha 4 [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10835103 interferon, alpha 4 [Homo sapiens]                        376   e-105
gi|10880985 interferon, alpha 17 [Homo sapiens]                       358   2e-99
gi|4504589 interferon, alpha 10 [Homo sapiens]                        358   2e-99
gi|71143135 interferon, alpha 7 [Homo sapiens]                        348   1e-96
gi|169791013 interferon, alpha 21 [Homo sapiens]                      343   4e-95
gi|4504593 interferon, alpha 16 [Homo sapiens]                        335   1e-92
gi|4504597 interferon, alpha 5 [Homo sapiens]                         324   3e-89
gi|170763491 interferon, alpha 14 [Homo sapiens]                      321   3e-88
gi|11128015 interferon, alpha 6 [Homo sapiens]                        307   4e-84
gi|194394174 interferon, alpha 13 precursor [Homo sapiens]            305   1e-83
gi|11067751 interferon, alpha 2 [Homo sapiens]                        305   2e-83
gi|13128950 interferon, alpha 1 [Homo sapiens]                        304   3e-83
gi|42476083 interferon, alpha 8 [Homo sapiens]                        300   4e-82
gi|4504605 interferon, omega 1 [Homo sapiens]                         213   1e-55
gi|28882045 interferon, epsilon [Homo sapiens]                        106   1e-23
gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]               99   2e-21
gi|112789564 interferon kappa precursor [Homo sapiens]                 77   1e-14
gi|58219054 pro-apoptotic Bcl-2 protein [Homo sapiens]                 31   0.73 
gi|5032281 dystrophin Dp427c isoform [Homo sapiens]                    28   3.6  
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]                   28   3.6  
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]                 28   3.6  
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]                   28   3.6  
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]                   28   3.6  
gi|5032285 dystrophin Dp427l isoform [Homo sapiens]                    28   3.6  
gi|5032283 dystrophin Dp427m isoform [Homo sapiens]                    28   3.6  
gi|34577120 mitochondrial translational release factor 1 [Homo s...    28   3.6  
gi|38455385 lysosomal-associated membrane protein 3 [Homo sapiens]     28   4.7  
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]     28   6.1  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    28   6.1  

>gi|10835103 interferon, alpha 4 [Homo sapiens]
          Length = 189

 Score =  376 bits (965), Expect = e-105
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG
Sbjct: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE
Sbjct: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN
Sbjct: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180

Query: 181 LQKRLRRKD 189
           LQKRLRRKD
Sbjct: 181 LQKRLRRKD 189


>gi|10880985 interferon, alpha 17 [Homo sapiens]
          Length = 189

 Score =  358 bits (919), Expect = 2e-99
 Identities = 181/189 (95%), Positives = 185/189 (97%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRIS FSCLKDRHDFG
Sbjct: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISPFSCLKDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
            P+EEFDG+QFQK QAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLN+LE
Sbjct: 61  LPQEEFDGNQFQKTQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNNLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVG+EETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN
Sbjct: 121 ACVIQEVGMEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180

Query: 181 LQKRLRRKD 189
           LQK LRRKD
Sbjct: 181 LQKILRRKD 189


>gi|4504589 interferon, alpha 10 [Homo sapiens]
          Length = 189

 Score =  358 bits (918), Expect = 2e-99
 Identities = 181/189 (95%), Positives = 184/189 (97%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILL QMGRIS FSCLKDRHDF 
Sbjct: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLGQMGRISPFSCLKDRHDFR 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
            P+EEFDG+QFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE
Sbjct: 61  IPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYL E+KYSPCAWEVVRAEIMRSLSFSTN
Sbjct: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLIERKYSPCAWEVVRAEIMRSLSFSTN 180

Query: 181 LQKRLRRKD 189
           LQKRLRRKD
Sbjct: 181 LQKRLRRKD 189


>gi|71143135 interferon, alpha 7 [Homo sapiens]
          Length = 189

 Score =  348 bits (894), Expect = 1e-96
 Identities = 177/189 (93%), Positives = 179/189 (94%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MA SFSLLM VLVLSYKSICSLGCDLPQTHSL NRRALILLAQMGRIS FSCLKDRH+F 
Sbjct: 1   MARSFSLLMVVLVLSYKSICSLGCDLPQTHSLRNRRALILLAQMGRISPFSCLKDRHEFR 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FPEEEFDGHQFQK QAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE
Sbjct: 61  FPEEEFDGHQFQKTQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVGVEETPLMNED ILAVRKYFQRITLYL EKKYSPCAWEVVRAEIMRS SFSTN
Sbjct: 121 ACVIQEVGVEETPLMNEDFILAVRKYFQRITLYLMEKKYSPCAWEVVRAEIMRSFSFSTN 180

Query: 181 LQKRLRRKD 189
           L+K LRRKD
Sbjct: 181 LKKGLRRKD 189


>gi|169791013 interferon, alpha 21 [Homo sapiens]
          Length = 189

 Score =  343 bits (881), Expect = 4e-95
 Identities = 174/189 (92%), Positives = 180/189 (95%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRIS FSCLKDRHDFG
Sbjct: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISPFSCLKDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKAQAISVLHEMIQQTFNLFST+DSSA WEQSLLEKFSTEL QQLNDLE
Sbjct: 61  FPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTKDSSATWEQSLLEKFSTELNQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVGVEETPLMN DSILAV+KYFQRITLYLTEKKYSPCAWEVVRAEIMRS S S  
Sbjct: 121 ACVIQEVGVEETPLMNVDSILAVKKYFQRITLYLTEKKYSPCAWEVVRAEIMRSFSLSKI 180

Query: 181 LQKRLRRKD 189
            Q+RLRRK+
Sbjct: 181 FQERLRRKE 189


>gi|4504593 interferon, alpha 16 [Homo sapiens]
          Length = 189

 Score =  335 bits (859), Expect = 1e-92
 Identities = 168/189 (88%), Positives = 177/189 (93%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDR+DFG
Sbjct: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRYDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+E FDG+QFQKAQAIS  HEMIQQTFNLFST+DSSAAW+++LL+KF  EL+QQLNDLE
Sbjct: 61  FPQEVFDGNQFQKAQAISAFHEMIQQTFNLFSTKDSSAAWDETLLDKFYIELFQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACV QEVGVEE  LMNEDSILAVRKYFQRITLYL  KKYSPCAWEVVRAEIMRS SFSTN
Sbjct: 121 ACVTQEVGVEEIALMNEDSILAVRKYFQRITLYLMGKKYSPCAWEVVRAEIMRSFSFSTN 180

Query: 181 LQKRLRRKD 189
           LQK LRRKD
Sbjct: 181 LQKGLRRKD 189


>gi|4504597 interferon, alpha 5 [Homo sapiens]
          Length = 189

 Score =  324 bits (830), Expect = 3e-89
 Identities = 158/189 (83%), Positives = 176/189 (93%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL F LLMA++VL+ KSICSLGCDLPQTHSL NRR L+++AQMGRIS FSCLKDRHDFG
Sbjct: 1   MALPFVLLMALVVLNCKSICSLGCDLPQTHSLSNRRTLMIMAQMGRISPFSCLKDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKAQAISVLHEMIQQTFNLFST+DSSA W+++LL+KF TELYQQLNDLE
Sbjct: 61  FPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTKDSSATWDETLLDKFYTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           AC++QEVGVE+TPLMN DSIL VRKYFQRITLYLTEKKYSPCAWEVVRAEIMRS S S N
Sbjct: 121 ACMMQEVGVEDTPLMNVDSILTVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSFSLSAN 180

Query: 181 LQKRLRRKD 189
           LQ+RLRRK+
Sbjct: 181 LQERLRRKE 189


>gi|170763491 interferon, alpha 14 [Homo sapiens]
          Length = 189

 Score =  321 bits (822), Expect = 3e-88
 Identities = 159/189 (84%), Positives = 177/189 (93%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL F+L+MA++VLS KS CSLGC+L QTHSL NRR L+L+AQM RIS FSCLKDRHDF 
Sbjct: 1   MALPFALMMALVVLSCKSSCSLGCNLSQTHSLNNRRTLMLMAQMRRISPFSCLKDRHDFE 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKAQAISVLHEM+QQTFNLFST++SSAAW+++LLEKF  EL+QQ+NDLE
Sbjct: 61  FPQEEFDGNQFQKAQAISVLHEMMQQTFNLFSTKNSSAAWDETLLEKFYIELFQQMNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQEVGVEETPLMNEDSILAV+KYFQRITLYL EKKYSPCAWEVVRAEIMRSLSFSTN
Sbjct: 121 ACVIQEVGVEETPLMNEDSILAVKKYFQRITLYLMEKKYSPCAWEVVRAEIMRSLSFSTN 180

Query: 181 LQKRLRRKD 189
           LQKRLRRKD
Sbjct: 181 LQKRLRRKD 189


>gi|11128015 interferon, alpha 6 [Homo sapiens]
          Length = 189

 Score =  307 bits (786), Expect = 4e-84
 Identities = 154/189 (81%), Positives = 171/189 (90%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL F+LLMA++VLS KS CSL CDLPQTHSLG+RR ++LLAQM RIS FSCLKDRHDF 
Sbjct: 1   MALPFALLMALVVLSCKSSCSLDCDLPQTHSLGHRRTMMLLAQMRRISLFSCLKDRHDFR 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKA+AISVLHE+IQQTFNLFST+DSS AW++ LL+K  TELYQQLNDLE
Sbjct: 61  FPQEEFDGNQFQKAEAISVLHEVIQQTFNLFSTKDSSVAWDERLLDKLYTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACV+QEV V  TPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRS S S N
Sbjct: 121 ACVMQEVWVGGTPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSFSSSRN 180

Query: 181 LQKRLRRKD 189
           LQ+RLRRK+
Sbjct: 181 LQERLRRKE 189


>gi|194394174 interferon, alpha 13 precursor [Homo sapiens]
          Length = 190

 Score =  305 bits (782), Expect = 1e-83
 Identities = 152/189 (80%), Positives = 170/189 (89%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MA  F+LLMA++VLS KS CSLGCDLP+THSL NRR L+LLAQM RIS  SCL DRHDFG
Sbjct: 2   MASPFALLMALVVLSCKSSCSLGCDLPETHSLDNRRTLMLLAQMSRISPSSCLMDRHDFG 61

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKA AISVLHE+IQQ FNLF+T+DSSAAW++ LL+KF TELYQQLNDLE
Sbjct: 62  FPQEEFDGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDEDLLDKFCTELYQQLNDLE 121

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACV+QE  V ETPLMN DSILAV+KYF+RITLYLTEKKYSPCAWEVVRAEIMRSLS STN
Sbjct: 122 ACVMQEERVGETPLMNADSILAVKKYFRRITLYLTEKKYSPCAWEVVRAEIMRSLSLSTN 181

Query: 181 LQKRLRRKD 189
           LQ+RLRRK+
Sbjct: 182 LQERLRRKE 190


>gi|11067751 interferon, alpha 2 [Homo sapiens]
          Length = 188

 Score =  305 bits (780), Expect = 2e-83
 Identities = 154/189 (81%), Positives = 171/189 (90%), Gaps = 1/189 (0%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL+F+LL+A+LVLS KS CS+GCDLPQTHSLG+RR L+LLAQM RIS FSCLKDRHDFG
Sbjct: 1   MALTFALLVALLVLSCKSSCSVGCDLPQTHSLGSRRTLMLLAQMRRISLFSCLKDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEF G+QFQKA+ I VLHEMIQQ FNLFST+DSSAAW+++LL+KF TELYQQLNDLE
Sbjct: 61  FPQEEF-GNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLE 119

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACVIQ VGV ETPLM EDSILAVRKYFQRITLYL EKKYSPCAWEVVRAEIMRS S STN
Sbjct: 120 ACVIQGVGVTETPLMKEDSILAVRKYFQRITLYLKEKKYSPCAWEVVRAEIMRSFSLSTN 179

Query: 181 LQKRLRRKD 189
           LQ+ LR K+
Sbjct: 180 LQESLRSKE 188


>gi|13128950 interferon, alpha 1 [Homo sapiens]
          Length = 189

 Score =  304 bits (778), Expect = 3e-83
 Identities = 151/189 (79%), Positives = 169/189 (89%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MA  F+LLM ++VLS KS CSLGCDLP+THSL NRR L+LLAQM RIS  SCL DRHDFG
Sbjct: 1   MASPFALLMVLVVLSCKSSCSLGCDLPETHSLDNRRTLMLLAQMSRISPSSCLMDRHDFG 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFDG+QFQKA AISVLHE+IQQ FNLF+T+DSSAAW++ LL+KF TELYQQLNDLE
Sbjct: 61  FPQEEFDGNQFQKAPAISVLHELIQQIFNLFTTKDSSAAWDEDLLDKFCTELYQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           ACV+QE  V ETPLMN DSILAV+KYF+RITLYLTEKKYSPCAWEVVRAEIMRSLS STN
Sbjct: 121 ACVMQEERVGETPLMNADSILAVKKYFRRITLYLTEKKYSPCAWEVVRAEIMRSLSLSTN 180

Query: 181 LQKRLRRKD 189
           LQ+RLRRK+
Sbjct: 181 LQERLRRKE 189


>gi|42476083 interferon, alpha 8 [Homo sapiens]
          Length = 189

 Score =  300 bits (769), Expect = 4e-82
 Identities = 154/189 (81%), Positives = 170/189 (89%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL+F LL+A++VLSYKS  SLGCDLPQTHSLGNRRALILLAQM RIS FSCLKDRHDF 
Sbjct: 1   MALTFYLLVALVVLSYKSFSSLGCDLPQTHSLGNRRALILLAQMRRISPFSCLKDRHDFE 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+EEFD  QFQKAQAISVLHEMIQQTFNLFST+DSSAA +++LL++F  EL QQLNDLE
Sbjct: 61  FPQEEFDDKQFQKAQAISVLHEMIQQTFNLFSTKDSSAALDETLLDEFYIELDQQLNDLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
           +CV+QEVGV E+PLM EDSILAVRKYFQRITLYLTEKKYS CAWEVVRAEIMRS S S N
Sbjct: 121 SCVMQEVGVIESPLMYEDSILAVRKYFQRITLYLTEKKYSSCAWEVVRAEIMRSFSLSIN 180

Query: 181 LQKRLRRKD 189
           LQKRL+ K+
Sbjct: 181 LQKRLKSKE 189


>gi|4504605 interferon, omega 1 [Homo sapiens]
          Length = 195

 Score =  213 bits (541), Expect = 1e-55
 Identities = 110/189 (58%), Positives = 133/189 (70%)

Query: 1   MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLAQMGRISHFSCLKDRHDFG 60
           MAL F LL A+++ SY  + SLGCDLPQ H L +R  L+LL QM RIS F CLKDR DF 
Sbjct: 1   MALLFPLLAALVMTSYSPVGSLGCDLPQNHGLLSRNTLVLLHQMRRISPFLCLKDRRDFR 60

Query: 61  FPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLE 120
           FP+E   G Q QKA  +SVLHEM+QQ F+LF TE SSAAW  +LL++  T L+QQL  LE
Sbjct: 61  FPQEMVKGSQLQKAHVMSVLHEMLQQIFSLFHTERSSAAWNMTLLDQLHTGLHQQLQHLE 120

Query: 121 ACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAWEVVRAEIMRSLSFSTN 180
            C++Q VG  E+        L +R+YFQ I +YL EKKYS CAWEVVR EIM+SL  STN
Sbjct: 121 TCLLQVVGEGESAGAISSPALTLRRYFQGIRVYLKEKKYSDCAWEVVRMEIMKSLFLSTN 180

Query: 181 LQKRLRRKD 189
           +Q+RLR KD
Sbjct: 181 MQERLRSKD 189


>gi|28882045 interferon, epsilon [Homo sapiens]
          Length = 208

 Score =  106 bits (265), Expect = 1e-23
 Identities = 58/155 (37%), Positives = 90/155 (58%)

Query: 34  NRRALILLAQMGRISHFSCLKDRHDFGFPEEEFDGHQFQKAQAISVLHEMIQQTFNLFST 93
           N+ +L LL ++  +S   CL  R +F  P++     Q+QK   +++LHEM+QQ F+LF  
Sbjct: 35  NQESLKLLNKLQTLSIQQCLPHRKNFLLPQKSLSPQQYQKGHTLAILHEMLQQIFSLFRA 94

Query: 94  EDSSAAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEETPLMNEDSILAVRKYFQRITLY 153
             S   WE++  EKF  +L+QQL  LEA +  E       L +++  L V+ YF+RI  Y
Sbjct: 95  NISLDGWEENHTEKFLIQLHQQLEYLEALMGLEAEKLSGTLGSDNLRLQVKMYFRRIHDY 154

Query: 154 LTEKKYSPCAWEVVRAEIMRSLSFSTNLQKRLRRK 188
           L  + YS CAW +V+ EI R L F  +L ++L ++
Sbjct: 155 LENQDYSTCAWAIVQVEISRCLFFVFSLTEKLSKQ 189


>gi|4504603 interferon, beta 1, fibroblast [Homo sapiens]
          Length = 187

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 2/142 (1%)

Query: 45  GRISHFSCLKDRHDFGFPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSL 104
           GR+ +  CLKDR +F  PEE     QFQK  A   ++EM+Q  F +F  + SS  W +++
Sbjct: 47  GRLEY--CLKDRMNFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQDSSSTGWNETI 104

Query: 105 LEKFSTELYQQLNDLEACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLTEKKYSPCAW 164
           +E     +Y Q+N L+  + +++  E+       S L +++Y+ RI  YL  K+YS CAW
Sbjct: 105 VENLLANVYHQINHLKTVLEEKLEKEDFTRGKLMSSLHLKRYYGRILHYLKAKEYSHCAW 164

Query: 165 EVVRAEIMRSLSFSTNLQKRLR 186
            +VR EI+R+  F   L   LR
Sbjct: 165 TIVRVEILRNFYFINRLTGYLR 186


>gi|112789564 interferon kappa precursor [Homo sapiens]
          Length = 207

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 63/203 (31%), Positives = 89/203 (43%), Gaps = 24/203 (11%)

Query: 3   LSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRA----LILLAQMGRISHFSCLKDRHD 58
           L   +LM + +       SL C+L   H    RR     L  L+ M       CL++   
Sbjct: 12  LWLEILMGIFIAG---TLSLDCNLLNVHL---RRVTWQNLRHLSSMSNSFPVECLRENIA 65

Query: 59  FGFPEEEFDGHQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLND 118
           F  P+E     Q  K       +EM  Q FN+FS + +   W++  L++    L QQ   
Sbjct: 66  FELPQEFLQYTQPMKRDIKKAFYEMSLQAFNIFS-QHTFKYWKERHLKQIQIGLDQQAEY 124

Query: 119 LEACVIQEVGV-EETPLMNED------------SILAVRKYFQRITLYLTEKKYSPCAWE 165
           L  C+ ++    E+   M E+            S L +R+YF RI  +L EKKYS CAWE
Sbjct: 125 LNQCLEEDKNENEDMKEMKENEMKPSEARVPQLSSLELRRYFHRIDNFLKEKKYSDCAWE 184

Query: 166 VVRAEIMRSLSFSTNLQKRLRRK 188
           +VR EI R L +        RRK
Sbjct: 185 IVRVEIRRCLYYFYKFTALFRRK 207


>gi|58219054 pro-apoptotic Bcl-2 protein [Homo sapiens]
          Length = 163

 Score = 30.8 bits (68), Expect = 0.73
 Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 73  KAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEET 132
           K Q  ++L + ++     +  +DSS A+E++ L   S +L + +  +   V+ +V +  T
Sbjct: 81  KGQTGAILQDTVESLSKTWCAQDSSLAYERAFL-AVSVKLLEYMAHIAPEVVGQVAIPMT 139

Query: 133 PLMNEDSILAVRKYFQ 148
            ++N +   A+R++ Q
Sbjct: 140 GMINGNQ--AIREFIQ 153


>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
          Length = 3677

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105  LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
            LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 1775 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 1822


>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
          Length = 2341

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105 LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
           LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 439 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 486


>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
          Length = 2344

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105 LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
           LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 442 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 489


>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
          Length = 3562

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105  LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
            LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 1660 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 1707


>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
          Length = 3681

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105  LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
            LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 1779 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 1826


>gi|5032285 dystrophin Dp427l isoform [Homo sapiens]
          Length = 3562

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105  LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
            LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 1660 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 1707


>gi|5032283 dystrophin Dp427m isoform [Homo sapiens]
          Length = 3685

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 105  LEKFSTELYQQLNDLEACVIQEVGVEETPL---MNEDSILAVRKYFQR 149
            LE+F++++ + L  LEA + Q V ++E      MNED+   V++  QR
Sbjct: 1783 LEQFNSDIQKLLEPLEAEIQQGVNLKEEDFNKDMNEDNEGTVKELLQR 1830


>gi|34577120 mitochondrial translational release factor 1 [Homo
           sapiens]
          Length = 445

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 79  VLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEE 131
           +LH + +     +  +D+   W+   L+K+   L ++   LE C +Q + V E
Sbjct: 49  ILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQC-LQHIPVNE 100


>gi|38455385 lysosomal-associated membrane protein 3 [Homo sapiens]
          Length = 416

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 110 TELYQQLNDLEACVIQEVGVEETPLMNEDSILAVRKYF 147
           T +YQ LN    C+  E+G+ +  + +++S+ + R+YF
Sbjct: 225 TGIYQVLNGSRLCIKAEMGI-QLIVQDKESVFSPRRYF 261


>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]
          Length = 561

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 76  AISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTEL 112
           A+S+LHE+   +      ED S A +Q + EK S  L
Sbjct: 62  AVSILHELCVDSLPTLDDEDLSVATKQCVPEKVSEPL 98


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 80   LHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQE 126
            L E  QQT +    E+       ++L K  T+L QQ++DLE  + QE
Sbjct: 1002 LQETHQQTLDDLQAEEDKV----NILTKAKTKLEQQVDDLEGSLEQE 1044


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,422,461
Number of Sequences: 37866
Number of extensions: 253735
Number of successful extensions: 552
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 31
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.