Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BCL2L15 Sequence: fasta or formatted (163aa) NCBI GI: 58219054
Description:

pro-apoptotic Bcl-2 protein

Referenced in:

Stomach, Small Intestine, and Colon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         15           1
 C cysteine            3.1          5           2
 D aspartate           4.3          7           1
 E glutamate           9.2         15           2
 F phenylalanine       3.7          6           1
 G glycine             7.4         12           2
 H histidine           0.6          1           1
 I isoleucine          6.7         11           2
 K lysine              3.1          5           1
 L leucine             9.2         15           2
 M methionine          3.7          6           1
 N asparagine          4.3          7           1
 P proline             2.5          4           1
 Q glutamine           6.7         11           1
 R arginine            3.1          5           1
 S serine              8.0         13           2
 T threonine           5.5          9           1
 V valine              7.4         12           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pro-apoptotic Bcl-2 protein 
IFNA4                 0.020   interferon, alpha 4 
IFNA10                0.020   interferon, alpha 10 
IFNA17                0.017   interferon, alpha 17 
IFNA7                 0.013   interferon, alpha 7 
CROCC                 0.010   ciliary rootlet coiled-coil 
LOC100294236          0.010   PREDICTED: similar to diffuse panbronchiolitis crit...
NCAPD2                0.010   non-SMC condensin I complex, subunit D2 
EAF2                  0.007   ELL associated factor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press