Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239749077

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
         (334 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ...   668   0.0  
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]           659   0.0  
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ...   657   0.0  
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]           657   0.0  
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             60   4e-09
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            55   9e-08
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            55   9e-08
gi|239754474 PREDICTED: similar to mucin [Homo sapiens]                52   6e-07
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            50   2e-06
gi|116734706 interferon regulatory factor 2 binding protein 2 is...    49   8e-06
gi|116734704 interferon regulatory factor 2 binding protein 2 is...    49   8e-06
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    48   1e-05
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    48   1e-05
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            48   1e-05
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            48   1e-05
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]           47   2e-05
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]           47   2e-05
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]           47   2e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       47   3e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       47   3e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      46   4e-05
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ...    46   4e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             46   5e-05
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    45   9e-05
gi|239752280 PREDICTED: similar to family with sequence similari...    45   9e-05
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    45   9e-05
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    45   9e-05
gi|210032463 family with sequence similarity 48, member B2 [Homo...    45   9e-05
gi|110681708 zinc finger protein 579 [Homo sapiens]                    45   1e-04
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04

>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
           sapiens]
          Length = 334

 Score =  668 bits (1724), Expect = 0.0
 Identities = 334/334 (100%), Positives = 334/334 (100%)

Query: 1   MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
           MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1   MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60

Query: 61  PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
           PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61  PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120

Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
           RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180

Query: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
           GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240

Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
           PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300

Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
           QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334


>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 334

 Score =  659 bits (1701), Expect = 0.0
 Identities = 331/334 (99%), Positives = 331/334 (99%)

Query: 1   MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
           MWVLTMFKNKTTCL GSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1   MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60

Query: 61  PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
           PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61  PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120

Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
           RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGG RPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180

Query: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
           GRSEPSTRACAVSG QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240

Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
           PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300

Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
           QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334


>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
           sapiens]
          Length = 329

 Score =  657 bits (1695), Expect = 0.0
 Identities = 329/329 (100%), Positives = 329/329 (100%)

Query: 6   MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
           MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1   MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60

Query: 66  GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
           GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61  GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120

Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 185
           EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180

Query: 186 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
           STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240

Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
           GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300

Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
           LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329


>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 329

 Score =  657 bits (1695), Expect = 0.0
 Identities = 329/329 (100%), Positives = 329/329 (100%)

Query: 6   MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
           MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1   MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60

Query: 66  GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
           GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61  GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120

Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 185
           EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180

Query: 186 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
           STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240

Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
           GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300

Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
           LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 41/268 (15%)

Query: 17  SDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERG 76
           +D A  +   S++DG  R + +EA P  P   ++EKG     P P     R      ERG
Sbjct: 416 TDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPE----REAETEPERG 471

Query: 77  ADHQ-----ERPAGAPA-----------HRPV-----PAAAAILRAA----VHRVLRVLR 111
           A  +       P+ APA           HRP      PAA+  L AA    V      L 
Sbjct: 472 AGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLD 531

Query: 112 AAAAVRDAERGLRREGP----RRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
           A AA  +  +  R E P     R AP RK     RG A L  A        R    RP  
Sbjct: 532 AEAAAPERPKAERAEAPPAGAERAAPERK---AERGGAELRGAKKFSVSSCRARP-RPGV 587

Query: 168 LVPVPLATPLLLEGRSEPSTRA-CAVSGGQAALLGAHVRPAPDRAARCAPR--AKKAGAN 224
             P+  A+  L   RS P  R+  A+   Q      H +P P + A   P+    +A + 
Sbjct: 588 SRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASP 647

Query: 225 AGARGQGRGAAAGP-ERPPHVQGRRPAP 251
           AG R   + AAA P  R P    + PAP
Sbjct: 648 AGPRKSPQEAAAAPGTREPCPAAQEPAP 675


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 89/288 (30%), Positives = 107/288 (37%), Gaps = 39/288 (13%)

Query: 31  GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
           G  RG GR  A  A  EG   +G   +R R      R   G   +G     +P+    G 
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755

Query: 87  PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
               P   AA + +  VH  + V L AAAAV  + RG  R+G  R A    +      A 
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813

Query: 146 GLVSAGHLGREP--PRGGGLRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGG 195
            ++  GH        RGGG    A    PLA  ++          GR     RA A +G 
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869

Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
           Q A  G   R          A  + A C  +   A A A A  QG  AA G    P  QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929

Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
                 RP  RG    RRA   AV  AGG   AR    R   G  A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)

Query: 66  GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
           GR E  R  R G  HQ    +R  G   HRP+P                           
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735

Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
            G R +G    A P  Q+ GR      V A  + + P  G        VPV L     + 
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787

Query: 181 GRSE-----PSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
           GR           + A  G Q A  GA +            +  +AG   GARG G  AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835

Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
            GP     VQ  R     A R  VGAR         AG     R  R     G       
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895

Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
            C QQ                 RH  P   +AAA  A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 45/170 (26%), Positives = 61/170 (35%), Gaps = 15/170 (8%)

Query: 54   KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
            +  R   P  +    +  R  +G  H+    GAP+HR  P A    R +  R    L   
Sbjct: 898  RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955

Query: 114  AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVP 170
            A    A  G RR G +     A  + +L G +    +V+A     +  RG   R  AL  
Sbjct: 956  AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015

Query: 171  VPLATPLLLEGRSEPSTRACAVSGGQAALLGAH--VRPAPDRAARCAPRA 218
             P    LL         R   +  G   +L  H  VR  P  A  C  RA
Sbjct: 1016 RPELEELL--------ERLHGLQDGLVDVLRHHRVVRLHPQLAGACDGRA 1057



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 54/181 (29%), Positives = 66/181 (36%), Gaps = 29/181 (16%)

Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLL 178
           A+  LR    R H     ++RG RG AG   AG L   P RG  L+   L   P      
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAP------ 487

Query: 179 LEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGP 238
             G +         + G   L+GA        AA  AP    AG        GRGA    
Sbjct: 488 -HGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAGNAPERLPAGVQGCGEEVGRGARGDR 544

Query: 239 ERPPHVQ----GRRPA---PRGAVGAR------RALLGAVGKAGGLTRA---RE--TRRR 280
               HV+    G++ A     G +G          L GA+G   GL  A   RE   RRR
Sbjct: 545 VAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRR 604

Query: 281 G 281
           G
Sbjct: 605 G 605


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 89/288 (30%), Positives = 107/288 (37%), Gaps = 39/288 (13%)

Query: 31  GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
           G  RG GR  A  A  EG   +G   +R R      R   G   +G     +P+    G 
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755

Query: 87  PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
               P   AA + +  VH  + V L AAAAV  + RG  R+G  R A    +      A 
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813

Query: 146 GLVSAGHLGREP--PRGGGLRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGG 195
            ++  GH        RGGG    A    PLA  ++          GR     RA A +G 
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869

Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
           Q A  G   R          A  + A C  +   A A A A  QG  AA G    P  QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929

Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
                 RP  RG    RRA   AV  AGG   AR    R   G  A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)

Query: 66  GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
           GR E  R  R G  HQ    +R  G   HRP+P                           
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735

Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
            G R +G    A P  Q+ GR      V A  + + P  G        VPV L     + 
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787

Query: 181 GRSE-----PSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
           GR           + A  G Q A  GA +            +  +AG   GARG G  AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835

Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
            GP     VQ  R     A R  VGAR         AG     R  R     G       
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895

Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
            C QQ                 RH  P   +AAA  A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 45/170 (26%), Positives = 61/170 (35%), Gaps = 15/170 (8%)

Query: 54   KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
            +  R   P  +    +  R  +G  H+    GAP+HR  P A    R +  R    L   
Sbjct: 898  RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955

Query: 114  AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVP 170
            A    A  G RR G +     A  + +L G +    +V+A     +  RG   R  AL  
Sbjct: 956  AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015

Query: 171  VPLATPLLLEGRSEPSTRACAVSGGQAALLGAH--VRPAPDRAARCAPRA 218
             P    LL         R   +  G   +L  H  VR  P  A  C  RA
Sbjct: 1016 RPELEELL--------ERLHGLQDGLVDVLRHHRVVRLHPQLAGACDGRA 1057



 Score = 29.3 bits (64), Expect = 5.2
 Identities = 54/181 (29%), Positives = 66/181 (36%), Gaps = 29/181 (16%)

Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLL 178
           A+  LR    R H     ++RG RG AG   AG L   P RG  L+   L   P      
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAP------ 487

Query: 179 LEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGP 238
             G +         + G   L+GA        AA  AP    AG        GRGA    
Sbjct: 488 -HGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAGNAPERLPAGVQGCGEEVGRGARGDR 544

Query: 239 ERPPHVQ----GRRPA---PRGAVGAR------RALLGAVGKAGGLTRA---RE--TRRR 280
               HV+    G++ A     G +G          L GA+G   GL  A   RE   RRR
Sbjct: 545 VAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRR 604

Query: 281 G 281
           G
Sbjct: 605 G 605


>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
          Length = 417

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 69/249 (27%), Positives = 97/249 (38%), Gaps = 22/249 (8%)

Query: 15  RGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVE 74
           RGS ++    +  +QD +       AA    A+  +E+   +  P PT S  RTE+    
Sbjct: 51  RGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEA--AAAPVPTSSGHRTEK---R 105

Query: 75  RGADHQERPAGAPAHRPVPAAAAILRAAVHRVL-RVLRAAAAVRDAERGLRREGPRRHAP 133
           +    Q +PAG    R    ++    A   R   R   AAAA     RG R E  +R  P
Sbjct: 106 KRLQLQCQPAGGTGQRRGSRSSP--SADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQP 163

Query: 134 PRKQLRG---RRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRAC 190
            R+   G   RRG+    SA   G +          A  P P +     E R +P    C
Sbjct: 164 QRRPAGGTGQRRGSGSSPSADQQGAQDRE----EEAAAAPAPTSRGHRTEKR-KPQQPQC 218

Query: 191 AVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPA 250
             +GG     G+   P+ D+  R   R ++A A      +G       +R P    RRPA
Sbjct: 219 RPAGGTGQRRGSRSSPSADQ-QRAQDREEEAAAAPAPTSRGHRT---EKRKPQQPQRRPA 274

Query: 251 PRGAVGARR 259
             G  G RR
Sbjct: 275 --GGTGQRR 281


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 74/272 (27%), Positives = 106/272 (38%), Gaps = 38/272 (13%)

Query: 27  SSQDGDRRGLGREAAP--GAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA 84
           S  D D++G  REA    G    G ++K    RRP+P     ++ RG  ++    ++R  
Sbjct: 197 SRGDEDKKGRQREAKSRFGKTRGGRRKK---HRRPKPAAGGAKSRRGGGKK--PQKQRRR 251

Query: 85  GAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGA 144
           G  A     +     R    + LR     AA+  A+R   R        P  + RG RG 
Sbjct: 252 GQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKR---RGAATAGEKPAAKGRGGRGP 308

Query: 145 AGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVS-----GGQ--A 197
             L      G+ P  G G + P               R + +T+A A       GGQ  A
Sbjct: 309 KSLG-----GQNPRWGRGGKKP-------------RRRGQKATKAAAAGTKRGGGGQQKA 350

Query: 198 ALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGA 257
           A++G   R    R  +  PR +KA A AGA+ +G G   G          R  PR     
Sbjct: 351 AVVGVKSRKKQRRRGK-KPRRQKASA-AGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPR 408

Query: 258 RRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
           RRA      K  G   +++ RRRG +   + G
Sbjct: 409 RRAQKAPAAKPRG-GGSKKPRRRGPKAAKSRG 439



 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 74/285 (25%), Positives = 104/285 (36%), Gaps = 42/285 (14%)

Query: 38  REAAPGAPAEGEKEKGKNSRRPRPTCSRGR---TERGRVERGADHQERPAGAPAHRPVPA 94
           R     A + G K +    ++PR    + R    E G   RG   Q R   + A      
Sbjct: 429 RRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRG 488

Query: 95  AAAILRAAVHRVLRVLRAAAAVRDAE----RGLRREGPRRHAPPRKQLRGRRG------- 143
                 +  +   R  +A AA   A     +   R+ PRR  P     + R G       
Sbjct: 489 GGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQR 548

Query: 144 ----AAGLVSAGHLGREPPRGGG-LRPPALVPVPLATPLLLEGRSEPS--------TRAC 190
               AAG  S G  G +  RGGG  +P        A      G  +P         T++ 
Sbjct: 549 QKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSR 608

Query: 191 AVSGGQ------AALLGAHVRPAP-DRAARCAPRAKKAGANAGARGQGRGAAAGPERPPH 243
           +  GG+      AA  GA  R  P  R  + A  A+KA A  GA  +G G      + P 
Sbjct: 609 SGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGSGG-----KQPR 662

Query: 244 VQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAA 288
            Q  +PA  G+  +  A +G   +A    R R  + RG+ G  AA
Sbjct: 663 WQ--KPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAA 705



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 36/247 (14%)

Query: 20  AGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADH 79
           AGVT +  S DG ++   R+ A G  A+  K+  +  ++      +     G   RG+  
Sbjct: 602 AGVT-KSRSGDGGKKAW-RQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGS-- 656

Query: 80  QERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLR 139
                G       PAAA    +A         AAA  ++AE    R+ PRR     +   
Sbjct: 657 ----GGKQPRWQKPAAAGSESSA---------AAAVGQEAEA---RKKPRRRRAKSRGDG 700

Query: 140 GRRGAAGLVSAGHLGREP----PRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGG 195
           G+  A G+      G++P     RGGG            +      +S  S  A + SG 
Sbjct: 701 GQNAAVGINPWQRRGKKPRLGKSRGGG---------GAKSRGSGGAKSRGSGGAKSRSGK 751

Query: 196 QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGR-RPAPRGA 254
           +AA   +H      R  R      ++G  A   G  + AAAG ++PP V+ R     + A
Sbjct: 752 KAAASKSHGGGGAKRR-RGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAA 810

Query: 255 VGARRAL 261
            G ++ L
Sbjct: 811 AGGKKPL 817



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 48/196 (24%)

Query: 107 LRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP 166
           LR  + A A ++A +  ++      A  R     +  AAG  S G  GR+P R G     
Sbjct: 73  LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRG----- 127

Query: 167 ALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAG 226
                         G  +P  RA      ++A  G+  R A          A+KA A AG
Sbjct: 128 --------QKAAATGSKKPRWRA-----QKSAAAGSKNRGA---------GAQKAAAAAG 165

Query: 227 ARGQG-----RGAAAGPERPPHVQGRRPAPRGA--------VGARRALLGAVGKAGGLTR 273
            + QG     + AAAG +      G++P  RGA         G +R      GK  G  R
Sbjct: 166 VKSQGGEKPQKAAAAGAKSR---SGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRR 222

Query: 274 ARETRRRGEEGVPAAG 289
            +  R +     PAAG
Sbjct: 223 KKHRRPK-----PAAG 233



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 51/193 (26%), Positives = 68/193 (35%), Gaps = 35/193 (18%)

Query: 149 SAGHLGREPPRGGGL-RPPALVPVPLATPLL---------LEGRSEPSTRACAVSGGQAA 198
           +AG  G   P G  L R P  +    A P L         L    +   R  A +GG+ A
Sbjct: 12  AAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKA 71

Query: 199 LLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG---AAAGPERPPHVQGRRPAPRGAV 255
            L         + AR     +KA    GA  +G G   AAA   +    +GR+P  RG  
Sbjct: 72  RLRGQKGAVAGKEAR--QHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK 129

Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVSVLVRH 315
            A      A G      RA+++   G +   A        Q+ A    V+          
Sbjct: 130 AA------ATGSKKPRWRAQKSAAAGSKNRGAGA------QKAAAAAGVK--------SQ 169

Query: 316 DGPLPLSAAALGA 328
            G  P  AAA GA
Sbjct: 170 GGEKPQKAAAAGA 182


>gi|116734706 interferon regulatory factor 2 binding protein 2
           isoform B [Homo sapiens]
          Length = 571

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)

Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGLRPPALVPV------PLATPLLL 179
           P    PP   +    G + L     L R+ P  R G   PP LVP+      PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205

Query: 180 EGRSEPS------TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
            GR+  S      T A ++   Q   LGAH RPA               ++A    + R 
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253

Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
           AAA  ++PP    R PA   +  A  A L A G       A ++R  GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296


>gi|116734704 interferon regulatory factor 2 binding protein 2
           isoform A [Homo sapiens]
          Length = 587

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)

Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGLRPPALVPV------PLATPLLL 179
           P    PP   +    G + L     L R+ P  R G   PP LVP+      PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205

Query: 180 EGRSEPS------TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
            GR+  S      T A ++   Q   LGAH RPA               ++A    + R 
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253

Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
           AAA  ++PP    R PA   +  A  A L A G       A ++R  GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)

Query: 62  TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
           TC   R+ + R+ERG              P  AA   +  A H   R   AA        
Sbjct: 43  TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83

Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
             R   PR  +PP     GR G+    SA      PPR      G  LRP A  P P   
Sbjct: 84  --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128

Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
                              G ++   +    AP  AAR AP RA   G+  G+RGQG   
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169

Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
              R + AG + PP    R R AP R A   RR  L    + G  T AR     G  G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229

Query: 287 ---AAGTP 291
              AA +P
Sbjct: 230 GTAAASSP 237


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)

Query: 62  TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
           TC   R+ + R+ERG              P  AA   +  A H   R   AA        
Sbjct: 43  TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83

Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
             R   PR  +PP     GR G+    SA      PPR      G  LRP A  P P   
Sbjct: 84  --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128

Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
                              G ++   +    AP  AAR AP RA   G+  G+RGQG   
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169

Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
              R + AG + PP    R R AP R A   RR  L    + G  T AR     G  G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229

Query: 287 ---AAGTP 291
              AA +P
Sbjct: 230 GTAAASSP 237


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)

Query: 62  TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
           TC   R+ + R+ERG              P  AA   +  A H   R   AA        
Sbjct: 43  TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83

Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
             R   PR  +PP     GR G+    SA      PPR      G  LRP A  P P   
Sbjct: 84  --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128

Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
                              G ++   +    AP  AAR AP RA   G+  G+RGQG   
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169

Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
              R + AG + PP    R R AP R A   RR  L    + G  T AR     G  G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229

Query: 287 ---AAGTP 291
              AA +P
Sbjct: 230 GTAAASSP 237


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 82/304 (26%), Positives = 107/304 (35%), Gaps = 67/304 (22%)

Query: 21  GVTCRVSSQDGDRRGLGR------EAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVE 74
           GV   + +  G RR LGR      EA+PG      + +G   R P P   R  +  G+  
Sbjct: 71  GVGAALLALPGSRR-LGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK-- 127

Query: 75  RGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAV----RDAERGLRREGPRR 130
                  RPA A    P P   ++ R     V   +R +       R   R  R    RR
Sbjct: 128 -------RPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRR 179

Query: 131 HAPPRKQLRGRRGAAGLVSAGHLGREPPR----GGGLRPPALVPVPLATPLLLEGRSEPS 186
             P    L+ R G+A           PPR      G R P+L P P              
Sbjct: 180 PLPKPPPLQPRLGSA----------SPPRLAAPLAGSRAPSLSPFP-------------- 215

Query: 187 TRACAVSGGQAALLGAHVRPAPDRAAR----CAPRAKKAGANAGARGQGRGAAAGPERPP 242
            R C     ++     H  P P   +R       R ++ G     RG+ +G A G   PP
Sbjct: 216 -RRCRRRAERSP--AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALG--SPP 270

Query: 243 HVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPR------CLQQ 296
              G  PA  G  G RRA      + GG   +     +G EGV    TPR      CL+ 
Sbjct: 271 IPAG--PAAPGRAGERRAARQWRKRGGGPGVSPREGAQG-EGVRGGVTPRARGSSTCLRP 327

Query: 297 EGAT 300
             AT
Sbjct: 328 SPAT 331



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 38/128 (29%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 166 PALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
           P + P P       EG   P    C+ +    A     + PAP R    A   + A   A
Sbjct: 19  PEVAPQP-------EGTDAPGPAVCSPT----ARAPPPILPAPQRPPTRAREWEGAAWAA 67

Query: 226 GARGQGRGAAAGP-----ERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRR 280
           GA G G    A P      R P +  R  +P  A GA RA  G+ G+  G  R R     
Sbjct: 68  GATGVGAALLALPGSRRLGRVP-LTFREASPGPAPGAPRA-RGSCGREPGPRRRRAPSSA 125

Query: 281 GEEGVPAA 288
           G+    AA
Sbjct: 126 GKRPAAAA 133


>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)

Query: 8   KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
           K KT C R  D      R S Q G++     +A   AP    +E+G++S    PT   R 
Sbjct: 33  KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84

Query: 67  RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
           +T RGR  +GA   E  AG  A    P P  A+  +  +                 R L 
Sbjct: 85  KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143

Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
            +R      A + +   G   +GP    PPR    G R   G  +A  L        GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199

Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
            PA  +P P         R  P    C  +   AA                 L     RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251

Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
              P+R  R A R +     +G RG   +G  A A P+  P       +   A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306

Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
             + G+ G          L   RE R+R      AAG  RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346


>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)

Query: 8   KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
           K KT C R  D      R S Q G++     +A   AP    +E+G++S    PT   R 
Sbjct: 33  KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84

Query: 67  RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
           +T RGR  +GA   E  AG  A    P P  A+  +  +                 R L 
Sbjct: 85  KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143

Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
            +R      A + +   G   +GP    PPR    G R   G  +A  L        GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199

Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
            PA  +P P         R  P    C  +   AA                 L     RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251

Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
              P+R  R A R +     +G RG   +G  A A P+  P       +   A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306

Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
             + G+ G          L   RE R+R      AAG  RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346


>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
          Length = 346

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)

Query: 8   KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
           K KT C R  D      R S Q G++     +A   AP    +E+G++S    PT   R 
Sbjct: 33  KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84

Query: 67  RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
           +T RGR  +GA   E  AG  A    P P  A+  +  +                 R L 
Sbjct: 85  KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143

Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
            +R      A + +   G   +GP    PPR    G R   G  +A  L        GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199

Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
            PA  +P P         R  P    C  +   AA                 L     RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251

Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
              P+R  R A R +     +G RG   +G  A A P+  P       +   A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306

Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
             + G+ G          L   RE R+R      AAG  RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 72/305 (23%), Positives = 100/305 (32%), Gaps = 85/305 (27%)

Query: 38  REAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAA 97
           R+A+PG        +G + + P P         G +  G    ++PAG PA +  P    
Sbjct: 424 RDASPG--------RGSHGQTPSP---------GALPLGRQTSQQPAGPPAQQRPPPQGG 466

Query: 98  ILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREP 157
             +                          GP+R  PP +Q                 R P
Sbjct: 467 PPQPG-----------------------PGPQRQGPPLQQ-----------------RPP 486

Query: 158 PRG----GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRP------A 207
           P+G     GL PPA  P+P   P       +P+++A   + GQ    G   RP      A
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ----GRQSRPVAGGPGA 542

Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
           P  A    P +      AG     R  +     PP   G  P  +   G  +   G  G 
Sbjct: 543 PPAAR--PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG- 599

Query: 268 AGGLTRARETRRRGEEG-VPAAGTPRCLQ--QEGATQVAVRLPLVSVLVRHDGPLPLSAA 324
                    TR+  + G VP  G P   Q    G        P ++     D P P +AA
Sbjct: 600 --------PTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAA 651

Query: 325 ALGAP 329
           A G P
Sbjct: 652 AGGPP 656


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 72/305 (23%), Positives = 100/305 (32%), Gaps = 85/305 (27%)

Query: 38  REAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAA 97
           R+A+PG        +G + + P P         G +  G    ++PAG PA +  P    
Sbjct: 424 RDASPG--------RGSHGQTPSP---------GALPLGRQTSQQPAGPPAQQRPPPQGG 466

Query: 98  ILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREP 157
             +                          GP+R  PP +Q                 R P
Sbjct: 467 PPQPG-----------------------PGPQRQGPPLQQ-----------------RPP 486

Query: 158 PRG----GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRP------A 207
           P+G     GL PPA  P+P   P       +P+++A   + GQ    G   RP      A
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ----GRQSRPVAGGPGA 542

Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
           P  A    P +      AG     R  +     PP   G  P  +   G  +   G  G 
Sbjct: 543 PPAAR--PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG- 599

Query: 268 AGGLTRARETRRRGEEG-VPAAGTPRCLQ--QEGATQVAVRLPLVSVLVRHDGPLPLSAA 324
                    TR+  + G VP  G P   Q    G        P ++     D P P +AA
Sbjct: 600 --------PTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAA 651

Query: 325 ALGAP 329
           A G P
Sbjct: 652 AGGPP 656


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 84/288 (29%), Positives = 96/288 (33%), Gaps = 48/288 (16%)

Query: 34  RGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRV-ERGADHQERPAGAPAHRPV 92
           +GL   A P   A    E+G       P  S  R ERG   ERG      PAG       
Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 702

Query: 93  PAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS-AG 151
           P                          + G       + AP  + + G RGAAGL    G
Sbjct: 703 PGNDGA-------------------KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 743

Query: 152 HLGREPPRGG----------GLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLG 201
             G   P+G           GL  P   P P   P   +G S PS  A     G     G
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP-GDKGESGPSGPAGPT--GARGAPG 800

Query: 202 AHVRPAPDRAARCA--------PRAKKAGANAGARGQ-GRGAAAGPERPPHVQGRRPAPR 252
               P P   A  A        P AK    +AGA+G  G    AGP  PP   G   AP 
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAP- 859

Query: 253 GAVGARRAL--LGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEG 298
           GA GAR +    GA G  G   R       G  G P  G P    +EG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPP--GPPGPAGKEG 905



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 53/166 (31%), Positives = 64/166 (38%), Gaps = 13/166 (7%)

Query: 132 APPRKQLRGRRGAAGLVSA----GHLGREPPRGGGLRP-PALVPVPLATPLLLEGRSEPS 186
           AP  K   G +G  G V      G  G E  RG    P P  +P P         R  P 
Sbjct: 438 APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497

Query: 187 TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG-QGRGAAAGPER---PP 242
               A   G A   G+     P  +   A R  +AG   GA+G  G   + GP+    PP
Sbjct: 498 ADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL-PGAKGLTGSPGSPGPDGKTGPP 556

Query: 243 HVQGR--RPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
              G+  RP P G  GAR    G +G  G    A E  + GE GVP
Sbjct: 557 GPAGQDGRPGPPGPPGAR-GQAGVMGFPGPKGAAGEPGKAGERGVP 601



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 87/322 (27%), Positives = 108/322 (33%), Gaps = 63/322 (19%)

Query: 31  GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRT-ERG----RVERGADHQERPAG 85
           G+   +G +  PG PA  E ++G     P PT   G   ERG    R   GAD    P G
Sbjct: 449 GEPGPVGVQGPPG-PAGEEGKRGARGE-PGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506

Query: 86  APAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
               R  P  A    +             A R  E GL         P  K L G  G+ 
Sbjct: 507 PAGERGSPGPAGPKGSP----------GEAGRPGEAGL---------PGAKGLTGSPGSP 547

Query: 146 GLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVR 205
           G    G  G   P G   RP    P P            P  +  A   G+A   G    
Sbjct: 548 G--PDGKTGPPGPAGQDGRPGP--PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV--- 600

Query: 206 PAPDRAARCAPRAKKAGAN--------AGARGQGRGAAA-------GPERPPHVQGRRPA 250
           P P  A   A +  +AGA         AG RG+   A +       GP  PP   G+ P 
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK-PG 659

Query: 251 PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVS 310
            +G  G     LGA G +G          RG +G P    PR          A       
Sbjct: 660 EQGVPGD----LGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGA------- 708

Query: 311 VLVRHDGPLPLSAAALGAPGLR 332
              + D   P +  + GAPGL+
Sbjct: 709 ---KGDAGAPGAPGSQGAPGLQ 727



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 69/284 (24%), Positives = 89/284 (31%), Gaps = 38/284 (13%)

Query: 37  GREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAA 96
           G +  PG P E         R P     +   +    + G   +  P G    R +P  A
Sbjct: 200 GFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259

Query: 97  AILRAAVHRVLRVLRAA--------------------AAVRDAERGLRREGPRRHAPPRK 136
            +     HR    L  A                    A  +   RGL  E  R  AP   
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319

Query: 137 QLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQ 196
             RG  GA G  +AG  G   P G    PP         P  +  + E   +    S G 
Sbjct: 320 GARGNDGATG--AAGPPGPTGPAG----PPGF-------PGAVGAKGEAGPQGPRGSEGP 366

Query: 197 AALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR-PAPRGAV 255
             + G    P P   A  A  A   GA+     +G   A G    P   G R P+     
Sbjct: 367 QGVRG---EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 423

Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEG-VPAAGTPRCLQQEG 298
           G      G  G+ G      +T  +GE G V   G P    +EG
Sbjct: 424 GGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEG 467



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 72/266 (27%), Positives = 86/266 (32%), Gaps = 65/266 (24%)

Query: 37   GREAAPGAPAEGEKEKGKNSR-------RPRPTCSRGRTERGRVERGADHQERPAGAPAH 89
            G    PG P    KE GK  R       RP      G       E+G+   + PAGAP  
Sbjct: 890  GNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG-EKGSPGADGPAGAPG- 947

Query: 90   RPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS 149
             P P   A  R  V                  GL  +            RG RG  GL  
Sbjct: 948  TPGPQGIAGQRGVV------------------GLPGQ------------RGERGFPGLPG 977

Query: 150  -AGHLGREPPRG-GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPA 207
             +G  G++ P G  G R P   P P+  P L     E          G+    GA   P 
Sbjct: 978  PSGEPGKQGPSGASGERGP---PGPMGPPGLAGPPGE---------SGREGAPGAEGSPG 1025

Query: 208  PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR----PA----PRGAVGARR 259
             D +        + G        G   A GP  P    G R    PA    P G VGAR 
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGAR- 1084

Query: 260  ALLGAVGKAGGLTRARETRRRGEEGV 285
               G  G  G      ET  +G+ G+
Sbjct: 1085 ---GPAGPQGPRGDKGETGEQGDRGI 1107



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 58/203 (28%), Positives = 65/203 (32%), Gaps = 35/203 (17%)

Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLA----TPLLLEG 181
           EGP+    PR    G RG AG      +  +P   G   PP     P       P L  G
Sbjct: 111 EGPKGDTGPR----GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYG 166

Query: 182 RSEPSTRACAVSG-----GQAALLGAHVRPAPD--RAARCAPRAKKAGANAGARGQ---- 230
             E ST   +V G     G   L G    P P   +     P    A    G RG     
Sbjct: 167 YDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226

Query: 231 ---------GRGAAAGPERPPHVQGRR--PAPRGAVGAR-----RALLGAVGKAGGLTRA 274
                    G+    G   PP  QG R  P   G  G +       L GA G AG     
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPK 286

Query: 275 RETRRRGEEGVPAAGTPRCLQQE 297
            E    GE G P    PR L  E
Sbjct: 287 GEPGSPGENGAPGQMGPRGLPGE 309



 Score = 32.3 bits (72), Expect = 0.61
 Identities = 59/192 (30%), Positives = 61/192 (31%), Gaps = 37/192 (19%)

Query: 118 DAERGLRREGPRRHAPPRKQLRGRRGAAGLVSA-GHLGREPPRGG-GLRPPALVPVPLAT 175
           D E G       R  P  +  RG  G AGL    GH G     G  G   PA    P   
Sbjct: 232 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPA---GPKGE 288

Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQ-GRGA 234
           P        P         G   L G   RP              A   AGARG  G   
Sbjct: 289 P------GSPGENGAPGQMGPRGLPGERGRPG-------------APGPAGARGNDGATG 329

Query: 235 AAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPA------- 287
           AAGP  P    G    P GAVGA+    G  G  G          RGE G P        
Sbjct: 330 AAGPPGPTGPAGPPGFP-GAVGAK----GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGP 384

Query: 288 AGTPRCLQQEGA 299
           AG P    Q GA
Sbjct: 385 AGNPGADGQPGA 396


>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
           sapiens]
          Length = 306

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 66/267 (24%), Positives = 99/267 (37%), Gaps = 41/267 (15%)

Query: 24  CRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRR-PRPTCSRGRTERGRVERGADHQER 82
           C+ +   G RRG G  ++P A  +G +++ + +   P PT    RTE+ + ++    Q R
Sbjct: 41  CQPAGGTGQRRGSG--SSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP---QRR 95

Query: 83  PAGAPAHR--PVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRG 140
           PAG    R     +++A  + A  R      A A      R  +R+  +    P      
Sbjct: 96  PAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQ 155

Query: 141 RRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALL 200
           RRG+    SA     +             PVP ++    E R     + C  +GG     
Sbjct: 156 RRGSGCSPSADQQRAQDRE----EEATAAPVPTSSGHRTEKRKRLQLQ-CQPAGGTGQRR 210

Query: 201 GAHVRPAPD--------RAARCAPRAKKAGAN-------------AGARGQGRGAAAGPE 239
           G+   P+          R +R +P A +  A              AG  GQ RG AA P 
Sbjct: 211 GSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPV 270

Query: 240 RPPHVQGRR------PAPRG-AVGARR 259
                 G+R      PAP     G RR
Sbjct: 271 PTTGGTGQRRGTAAAPAPTSTGTGQRR 297



 Score = 38.9 bits (89), Expect = 0.007
 Identities = 51/203 (25%), Positives = 68/203 (33%), Gaps = 38/203 (18%)

Query: 112 AAAAVRDAERGLRREGPRRHAPPRKQLRG---RRGAAGLVSAGHLGREPPRGGGLRPPAL 168
           AAAA     RG R E  +   P R+   G   RRG+    SA   G +          A 
Sbjct: 71  AAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDRE----EEAAA 126

Query: 169 VPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRA--------ARCAPRAKK 220
            P P ++    E R +P    C  + G     G+   P+ D+         A  AP    
Sbjct: 127 APAPTSSGHRTEKR-KPQQPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPTS 185

Query: 221 AGAN-------------AGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
           +G               AG  GQ RG+ + P R          P G  G RR    +   
Sbjct: 186 SGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSR---------QPAGGTGQRRGSRSSPSA 236

Query: 268 AGGLTRARETRRRGEEGVPAAGT 290
                + RE      +  PA GT
Sbjct: 237 DQQRAQDREEEAAQPQRRPAGGT 259


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 73/268 (27%), Positives = 96/268 (35%), Gaps = 51/268 (19%)

Query: 26  VSSQDGDRRGLGREAAPGAPAEGEK---EKGKNSRRPRPTCSRG----RTERGRVERGAD 78
           +SS   D R   R  +P    EG K   ++   SR P P+   G    +   G  +R   
Sbjct: 265 LSSHYSDSRSPSR-LSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGA 323

Query: 79  HQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQL 138
           H  RP  A +    P++ +         +R   AAAA     RG  +E P   + P  Q 
Sbjct: 324 HGGRPGSAHSPPDKPSSPSPR-------VRDKAAAAAPTPPARG--KESPSPRSAPSSQG 374

Query: 139 RGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAA 198
           RG R A G   AG   R   R    R  A  P          GR  P             
Sbjct: 375 RGGRAAGG---AGRRRRRRRRRRRSRSSASAP-------RRRGRRRP------------- 411

Query: 199 LLGAHVRPAPDR-AARCAPRAKKAGANAGARG-QGRGAAAGPERPPHVQGRRP---APRG 253
                 RPAP R ++R   RA+ +  +   RG  G G   G ER     G+R     PR 
Sbjct: 412 ------RPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRA 465

Query: 254 AVGARRALLGAVGKAGGLTRARETRRRG 281
              +     GA G+ GG      +R  G
Sbjct: 466 RPASTSPSPGAHGRRGGPEGKSSSRSPG 493



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 23/107 (21%)

Query: 193 SGGQAALLGAHV-RPA-----PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
           +GG     GAH  RP      PD+ +  +PR +            + AAA P  PP    
Sbjct: 314 NGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRD-----------KAAAAAPT-PPARGK 361

Query: 247 RRPAPRGAVGARRALLGAVGK-AGGLTRARETRRRGEEGVPAAGTPR 292
             P+PR A  ++    G  G+ AGG  R R  RRR      +A  PR
Sbjct: 362 ESPSPRSAPSSQ----GRGGRAAGGAGRRRRRRRRRRRSRSSASAPR 404


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)

Query: 53  GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
           G  SR  R     GR+ R R  RG     RP   P H     A  +              
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215

Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
               R A  G    GP RH      LRG   AA   +A  LG  PP    L  P  +L  
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268

Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
            PL  P      S  + R C V+  Q++   +H      R     PRA    A A  R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328

Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
              G A  P  P  ++ G  P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351


>gi|239752280 PREDICTED: similar to family with sequence similarity
           48, member B2 [Homo sapiens]
          Length = 779

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 58/209 (27%), Positives = 78/209 (37%), Gaps = 38/209 (18%)

Query: 53  GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
           GK  + P P  ++  +  G++  G     + AG+P  RP PAAA  + AA          
Sbjct: 417 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 475

Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
               AAAAV  A  G      ++ + P  +   RR AAG                 RP  
Sbjct: 476 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 518

Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--GQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
            V +    P +         +A  V G    A +LG   +P        AP    A A A
Sbjct: 519 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 568

Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
           G  G G  ++ GP    RP  VQ   PAP
Sbjct: 569 GISGSGLQSSGGPLPDARPGAVQASSPAP 597



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)

Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRA 189
           +H PPR QL     ++G +S+G+    PP+  G   P   P P A P +           
Sbjct: 421 KHPPPRTQLPS---SSGKISSGN--SFPPQQAG--SPLKRPFPAAAPAV----------- 462

Query: 190 CAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
                       A   PAP  A   AP    A   A A G     +  P  P      RR
Sbjct: 463 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 510

Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
           PA   P   V    A+    G  G      E   RG + +  +  P  +Q  G+   A  
Sbjct: 511 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 568

Query: 306 LPLVSVLVRHDGPLP 320
               S L    GPLP
Sbjct: 569 GISGSGLQSSGGPLP 583


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)

Query: 53  GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
           G  SR  R     GR+ R R  RG     RP   P H     A  +              
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215

Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
               R A  G    GP RH      LRG   AA   +A  LG  PP    L  P  +L  
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268

Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
            PL  P      S  + R C V+  Q++   +H      R     PRA    A A  R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328

Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
              G A  P  P  ++ G  P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)

Query: 53  GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
           G  SR  R     GR+ R R  RG     RP   P H     A  +              
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215

Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
               R A  G    GP RH      LRG   AA   +A  LG  PP    L  P  +L  
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268

Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
            PL  P      S  + R C V+  Q++   +H      R     PRA    A A  R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328

Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
              G A  P  P  ++ G  P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351


>gi|210032463 family with sequence similarity 48, member B2 [Homo
           sapiens]
          Length = 817

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 58/209 (27%), Positives = 78/209 (37%), Gaps = 38/209 (18%)

Query: 53  GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
           GK  + P P  ++  +  G++  G     + AG+P  RP PAAA  + AA          
Sbjct: 455 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 513

Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
               AAAAV  A  G      ++ + P  +   RR AAG                 RP  
Sbjct: 514 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 556

Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--GQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
            V +    P +         +A  V G    A +LG   +P        AP    A A A
Sbjct: 557 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 606

Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
           G  G G  ++ GP    RP  VQ   PAP
Sbjct: 607 GISGSGLQSSGGPLPDARPGAVQASSPAP 635



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)

Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRA 189
           +H PPR QL     ++G +S+G+    PP+  G   P   P P A P +           
Sbjct: 459 KHPPPRTQLPS---SSGKISSGN--SFPPQQAG--SPLKRPFPAAAPAV----------- 500

Query: 190 CAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
                       A   PAP  A   AP    A   A A G     +  P  P      RR
Sbjct: 501 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 548

Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
           PA   P   V    A+    G  G      E   RG + +  +  P  +Q  G+   A  
Sbjct: 549 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 606

Query: 306 LPLVSVLVRHDGPLP 320
               S L    GPLP
Sbjct: 607 GISGSGLQSSGGPLP 621


>gi|110681708 zinc finger protein 579 [Homo sapiens]
          Length = 562

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 51/174 (29%), Positives = 68/174 (39%), Gaps = 25/174 (14%)

Query: 21  GVTCRVSSQDGDRRGLGREAAPGAPAEGEK-----EKGKNSRR-------------PRP- 61
           G  C  +S+ G+ +  G +AAP  P  GE      E GK  RR              RP 
Sbjct: 354 GAECGGASEGGEGQN-GGDAAPARPPAGEPRFWCPECGKGFRRRAHLRQHGVTHSGARPF 412

Query: 62  TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAA--VHRVLRVLRAAAAVRDA 119
            C R + E  R+   A H +  AG PA  P P        A  + R  R  RA      A
Sbjct: 413 QCVRCQREFKRLADLARHAQVHAGGPAPHPCPRCPRRFSRAYSLLRHQRCHRAELERAAA 472

Query: 120 ERGLRREGPRRHAPPRKQLRGRRGAAGL-VSAGHLGREPPRGGGLRPPALVPVP 172
            + L+ + P    PP   L+  +   GL +   ++  EPP  G   PP   P P
Sbjct: 473 LQALQAQAPTSPPPPPPPLKAEQEEEGLPLPLANIKEEPPSPG--TPPQSPPAP 524



 Score = 29.6 bits (65), Expect = 3.9
 Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 16/90 (17%)

Query: 170 PVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG 229
           P+ L  PL   G+ +        SG + +  G    P     A C       GA+ G  G
Sbjct: 322 PLSLLAPLPAAGKKDDKA-----SGARNSAKG----PEGGEGAECG------GASEGGEG 366

Query: 230 QGRGAAAGPERPPHVQGRRPAPRGAVGARR 259
           Q  G AA P RPP  + R   P    G RR
Sbjct: 367 QNGGDAA-PARPPAGEPRFWCPECGKGFRR 395


>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 68/248 (27%), Positives = 89/248 (35%), Gaps = 25/248 (10%)

Query: 57  RRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAV 116
           R+ RP   R  T   RV   A H          +P+ A +      +  V    R    +
Sbjct: 4   RKVRPEAGRAPTGL-RVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGLGL 62

Query: 117 RDAERGLRREGPRRHAPPRKQL-RGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLAT 175
             A R      P   AP R +L  GRR      SAGH+ R       + PPA  PVP  T
Sbjct: 63  PIAGRPKAGPSPSPAAPTRPRLLHGRR------SAGHVAR-----ADVSPPA-GPVPAPT 110

Query: 176 PLLLEGRSEPSTRACAVSGG----QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQG 231
           P        P   A  ++ G     AALL   +  A  +  R  P    +      R   
Sbjct: 111 PPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASR 170

Query: 232 RGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGG-----LTRARET--RRRGEEG 284
           +  +    RPPH    RP PR   G  R    A G+  G       R +++  RRR   G
Sbjct: 171 KLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPG 230

Query: 285 VPAAGTPR 292
            PA  + R
Sbjct: 231 PPALRSGR 238


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,962,602
Number of Sequences: 37866
Number of extensions: 967885
Number of successful extensions: 7647
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 813
Number of HSP's that attempted gapping in prelim test: 6287
Number of HSP's gapped (non-prelim): 1904
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press