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Search of human proteins with 239749077
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 668 0.0
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 659 0.0
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 657 0.0
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 657 0.0
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 60 4e-09
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 55 9e-08
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 55 9e-08
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 52 6e-07
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 49 8e-06
gi|116734704 interferon regulatory factor 2 binding protein 2 is... 49 8e-06
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 48 1e-05
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 48 1e-05
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 48 1e-05
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 47 2e-05
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 47 2e-05
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 47 2e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 47 3e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 3e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 46 4e-05
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 46 4e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 46 5e-05
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 45 9e-05
gi|239752280 PREDICTED: similar to family with sequence similari... 45 9e-05
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 45 9e-05
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 45 9e-05
gi|210032463 family with sequence similarity 48, member B2 [Homo... 45 9e-05
gi|110681708 zinc finger protein 579 [Homo sapiens] 45 1e-04
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 668 bits (1724), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1 MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
Query: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
Query: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 659 bits (1701), Expect = 0.0
Identities = 331/334 (99%), Positives = 331/334 (99%)
Query: 1 MWVLTMFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
MWVLTMFKNKTTCL GSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR
Sbjct: 1 MWVLTMFKNKTTCLCGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPR 60
Query: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE
Sbjct: 61 PTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGG RPPALVPVPLATPLLLE
Sbjct: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLLLE 180
Query: 181 GRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
GRSEPSTRACAVSG QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER
Sbjct: 181 GRSEPSTRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPER 240
Query: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT
Sbjct: 241 PPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGAT 300
Query: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 QVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 657 bits (1695), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 6 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60
Query: 66 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 185
EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180
Query: 186 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240
Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300
Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 657 bits (1695), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 6 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 65
MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR
Sbjct: 1 MFKNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSR 60
Query: 66 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 125
GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR
Sbjct: 61 GRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRR 120
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 185
EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP
Sbjct: 121 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEP 180
Query: 186 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 245
STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ
Sbjct: 181 STRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQ 240
Query: 246 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR
Sbjct: 241 GRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 300
Query: 306 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
LPLVSVLVRHDGPLPLSAAALGAPGLRTA
Sbjct: 301 LPLVSVLVRHDGPLPLSAAALGAPGLRTA 329
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 59.7 bits (143), Expect = 4e-09
Identities = 81/268 (30%), Positives = 105/268 (39%), Gaps = 41/268 (15%)
Query: 17 SDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERG 76
+D A + S++DG R + +EA P P ++EKG P P R ERG
Sbjct: 416 TDPAATSEAPSARDGPERSVPKEAEPTPPVLPDEEKGPPGPAPEPE----REAETEPERG 471
Query: 77 ADHQ-----ERPAGAPA-----------HRPV-----PAAAAILRAA----VHRVLRVLR 111
A + P+ APA HRP PAA+ L AA V L
Sbjct: 472 AGTEPERIGTEPSTAPAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLD 531
Query: 112 AAAAVRDAERGLRREGP----RRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
A AA + + R E P R AP RK RG A L A R RP
Sbjct: 532 AEAAAPERPKAERAEAPPAGAERAAPERK---AERGGAELRGAKKFSVSSCRARP-RPGV 587
Query: 168 LVPVPLATPLLLEGRSEPSTRA-CAVSGGQAALLGAHVRPAPDRAARCAPR--AKKAGAN 224
P+ A+ L RS P R+ A+ Q H +P P + A P+ +A +
Sbjct: 588 SRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASP 647
Query: 225 AGARGQGRGAAAGP-ERPPHVQGRRPAP 251
AG R + AAA P R P + PAP
Sbjct: 648 AGPRKSPQEAAAAPGTREPCPAAQEPAP 675
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 55.1 bits (131), Expect = 9e-08
Identities = 89/288 (30%), Positives = 107/288 (37%), Gaps = 39/288 (13%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
G RG GR A A EG +G +R R R G +G +P+ G
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755
Query: 87 PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
P AA + + VH + V L AAAAV + RG R+G R A + A
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813
Query: 146 GLVSAGHLGREP--PRGGGLRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGG 195
++ GH RGGG A PLA ++ GR RA A +G
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
Q A G R A + A C + A A A A QG AA G P QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RP RG RRA AV AGG AR R G A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974
Score = 42.7 bits (99), Expect = 5e-04
Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)
Query: 66 GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
GR E R R G HQ +R G HRP+P
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
G R +G A P Q+ GR V A + + P G VPV L +
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787
Query: 181 GRSE-----PSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
GR + A G Q A GA + + +AG GARG G AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835
Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
GP VQ R A R VGAR AG R R G
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895
Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
C QQ RH P +AAA A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918
Score = 30.8 bits (68), Expect = 1.8
Identities = 45/170 (26%), Positives = 61/170 (35%), Gaps = 15/170 (8%)
Query: 54 KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
+ R P + + R +G H+ GAP+HR P A R + R L
Sbjct: 898 RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955
Query: 114 AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVP 170
A A G RR G + A + +L G + +V+A + RG R AL
Sbjct: 956 AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015
Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAH--VRPAPDRAARCAPRA 218
P LL R + G +L H VR P A C RA
Sbjct: 1016 RPELEELL--------ERLHGLQDGLVDVLRHHRVVRLHPQLAGACDGRA 1057
Score = 29.3 bits (64), Expect = 5.2
Identities = 54/181 (29%), Positives = 66/181 (36%), Gaps = 29/181 (16%)
Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLL 178
A+ LR R H ++RG RG AG AG L P RG L+ L P
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAP------ 487
Query: 179 LEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGP 238
G + + G L+GA AA AP AG GRGA
Sbjct: 488 -HGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAGNAPERLPAGVQGCGEEVGRGARGDR 544
Query: 239 ERPPHVQ----GRRPA---PRGAVGAR------RALLGAVGKAGGLTRA---RE--TRRR 280
HV+ G++ A G +G L GA+G GL A RE RRR
Sbjct: 545 VAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRR 604
Query: 281 G 281
G
Sbjct: 605 G 605
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 55.1 bits (131), Expect = 9e-08
Identities = 89/288 (30%), Positives = 107/288 (37%), Gaps = 39/288 (13%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA----GA 86
G RG GR A A EG +G +R R R G +G +P+ G
Sbjct: 697 GRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLGH-RPLPGWRGQGVGPLAQPSVQVLGR 755
Query: 87 PAHRPVPAAAAILRAAVHRVLRV-LRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
P AA + + VH + V L AAAAV + RG R+G R A + A
Sbjct: 756 VPRDPAVGAATVAQGPVHGHVPVELTAAAAV--SGRGRLRDGLGRVASVAAEGAQVAWAG 813
Query: 146 GLVSAGHLGREP--PRGGGLRPPALVPVPLATPLLLE--------GRSEPSTRACAVSGG 195
++ GH RGGG A PLA ++ GR RA A +G
Sbjct: 814 AVLVQGHEAGVAGGARGGG----AAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGR 869
Query: 196 QAALLGAHVR---------PAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
Q A G R A + A C + A A A A QG AA G P QG
Sbjct: 870 QGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQG 929
Query: 247 -----RRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RP RG RRA AV AGG AR R G A G
Sbjct: 930 APSHRHRPGARGRRSRRRA---AVALAGGAHPARAALGRRRGGGQAVG 974
Score = 42.7 bits (99), Expect = 5e-04
Identities = 76/283 (26%), Positives = 89/283 (31%), Gaps = 81/283 (28%)
Query: 66 GRTERGRVER-GADHQ----ERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAE 120
GR E R R G HQ +R G HRP+P
Sbjct: 703 GRAEAARAAREGGPHQGVFIQRGRGGLGHRPLP--------------------------- 735
Query: 121 RGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLE 180
G R +G A P Q+ GR V A + + P G VPV L +
Sbjct: 736 -GWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGH-------VPVELTAAAAVS 787
Query: 181 GRSE-----PSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAA 235
GR + A G Q A GA + + +AG GARG G AA
Sbjct: 788 GRGRLRDGLGRVASVAAEGAQVAWAGAVL-----------VQGHEAGVAGGARGGG-AAA 835
Query: 236 AGPERPPHVQGRRP----APRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTP 291
GP VQ R A R VGAR AG R R G
Sbjct: 836 GGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRA 895
Query: 292 RCLQQEGATQVAVRLPLVSVLVRHDGPLPLSAAALGAPGLRTA 334
C QQ RH P +AAA A G+R A
Sbjct: 896 PCRQQ-----------------RHLAP---AAAAAAAQGVRAA 918
Score = 30.8 bits (68), Expect = 1.8
Identities = 45/170 (26%), Positives = 61/170 (35%), Gaps = 15/170 (8%)
Query: 54 KNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAA 113
+ R P + + R +G H+ GAP+HR P A R + R L
Sbjct: 898 RQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARG--RRSRRRAAVALAGG 955
Query: 114 AAVRDAERGLRREGPR---RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVP 170
A A G RR G + A + +L G + +V+A + RG R AL
Sbjct: 956 AHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVVVAARAGDADGVRGRRPRRLALTA 1015
Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAH--VRPAPDRAARCAPRA 218
P LL R + G +L H VR P A C RA
Sbjct: 1016 RPELEELL--------ERLHGLQDGLVDVLRHHRVVRLHPQLAGACDGRA 1057
Score = 29.3 bits (64), Expect = 5.2
Identities = 54/181 (29%), Positives = 66/181 (36%), Gaps = 29/181 (16%)
Query: 119 AERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLL 178
A+ LR R H ++RG RG AG AG L P RG L+ L P
Sbjct: 436 AQEALRAAAARPHGRRHYRVRGLRG-AGPEGAGRLA-GPWRGLRLQTLLLQDAP------ 487
Query: 179 LEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGP 238
G + + G L+GA AA AP AG GRGA
Sbjct: 488 -HGGAHEHVLVAVPATGVGGLVGA--GQGAVAAAGNAPERLPAGVQGCGEEVGRGARGDR 544
Query: 239 ERPPHVQ----GRRPA---PRGAVGAR------RALLGAVGKAGGLTRA---RE--TRRR 280
HV+ G++ A G +G L GA+G GL A RE RRR
Sbjct: 545 VAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRR 604
Query: 281 G 281
G
Sbjct: 605 G 605
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 52.4 bits (124), Expect = 6e-07
Identities = 69/249 (27%), Positives = 97/249 (38%), Gaps = 22/249 (8%)
Query: 15 RGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVE 74
RGS ++ + +QD + AA A+ +E+ + P PT S RTE+
Sbjct: 51 RGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEA--AAAPVPTSSGHRTEK---R 105
Query: 75 RGADHQERPAGAPAHRPVPAAAAILRAAVHRVL-RVLRAAAAVRDAERGLRREGPRRHAP 133
+ Q +PAG R ++ A R R AAAA RG R E +R P
Sbjct: 106 KRLQLQCQPAGGTGQRRGSRSSP--SADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQP 163
Query: 134 PRKQLRG---RRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRAC 190
R+ G RRG+ SA G + A P P + E R +P C
Sbjct: 164 QRRPAGGTGQRRGSGSSPSADQQGAQDRE----EEAAAAPAPTSRGHRTEKR-KPQQPQC 218
Query: 191 AVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPA 250
+GG G+ P+ D+ R R ++A A +G +R P RRPA
Sbjct: 219 RPAGGTGQRRGSRSSPSADQ-QRAQDREEEAAAAPAPTSRGHRT---EKRKPQQPQRRPA 274
Query: 251 PRGAVGARR 259
G G RR
Sbjct: 275 --GGTGQRR 281
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 50.4 bits (119), Expect = 2e-06
Identities = 74/272 (27%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 27 SSQDGDRRGLGREAAP--GAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPA 84
S D D++G REA G G ++K RRP+P ++ RG ++ ++R
Sbjct: 197 SRGDEDKKGRQREAKSRFGKTRGGRRKK---HRRPKPAAGGAKSRRGGGKK--PQKQRRR 251
Query: 85 GAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGA 144
G A + R + LR AA+ A+R R P + RG RG
Sbjct: 252 GQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKR---RGAATAGEKPAAKGRGGRGP 308
Query: 145 AGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVS-----GGQ--A 197
L G+ P G G + P R + +T+A A GGQ A
Sbjct: 309 KSLG-----GQNPRWGRGGKKP-------------RRRGQKATKAAAAGTKRGGGGQQKA 350
Query: 198 ALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGA 257
A++G R R + PR +KA A AGA+ +G G G R PR
Sbjct: 351 AVVGVKSRKKQRRRGK-KPRRQKASA-AGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPR 408
Query: 258 RRALLGAVGKAGGLTRARETRRRGEEGVPAAG 289
RRA K G +++ RRRG + + G
Sbjct: 409 RRAQKAPAAKPRG-GGSKKPRRRGPKAAKSRG 439
Score = 45.1 bits (105), Expect = 9e-05
Identities = 74/285 (25%), Positives = 104/285 (36%), Gaps = 42/285 (14%)
Query: 38 REAAPGAPAEGEKEKGKNSRRPRPTCSRGR---TERGRVERGADHQERPAGAPAHRPVPA 94
R A + G K + ++PR + R E G RG Q R + A
Sbjct: 429 RRGPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRG 488
Query: 95 AAAILRAAVHRVLRVLRAAAAVRDAE----RGLRREGPRRHAPPRKQLRGRRG------- 143
+ + R +A AA A + R+ PRR P + R G
Sbjct: 489 GGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGGSKSRQR 548
Query: 144 ----AAGLVSAGHLGREPPRGGG-LRPPALVPVPLATPLLLEGRSEPS--------TRAC 190
AAG S G G + RGGG +P A G +P T++
Sbjct: 549 QKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSR 608
Query: 191 AVSGGQ------AALLGAHVRPAP-DRAARCAPRAKKAGANAGARGQGRGAAAGPERPPH 243
+ GG+ AA GA R P R + A A+KA A GA +G G + P
Sbjct: 609 SGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGSGG-----KQPR 662
Query: 244 VQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAA 288
Q +PA G+ + A +G +A R R + RG+ G AA
Sbjct: 663 WQ--KPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAA 705
Score = 37.7 bits (86), Expect = 0.014
Identities = 63/247 (25%), Positives = 97/247 (39%), Gaps = 36/247 (14%)
Query: 20 AGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADH 79
AGVT + S DG ++ R+ A G A+ K+ + ++ + G RG+
Sbjct: 602 AGVT-KSRSGDGGKKAW-RQKAAGTGAKSRKKPWRRGQKDAAAAEKAWAT-GATSRGS-- 656
Query: 80 QERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLR 139
G PAAA +A AAA ++AE R+ PRR +
Sbjct: 657 ----GGKQPRWQKPAAAGSESSA---------AAAVGQEAEA---RKKPRRRRAKSRGDG 700
Query: 140 GRRGAAGLVSAGHLGREP----PRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGG 195
G+ A G+ G++P RGGG + +S S A + SG
Sbjct: 701 GQNAAVGINPWQRRGKKPRLGKSRGGG---------GAKSRGSGGAKSRGSGGAKSRSGK 751
Query: 196 QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGR-RPAPRGA 254
+AA +H R R ++G A G + AAAG ++PP V+ R + A
Sbjct: 752 KAAASKSHGGGGAKRR-RGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAA 810
Query: 255 VGARRAL 261
G ++ L
Sbjct: 811 AGGKKPL 817
Score = 34.3 bits (77), Expect = 0.16
Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 48/196 (24%)
Query: 107 LRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP 166
LR + A A ++A + ++ A R + AAG S G GR+P R G
Sbjct: 73 LRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRG----- 127
Query: 167 ALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAG 226
G +P RA ++A G+ R A A+KA A AG
Sbjct: 128 --------QKAAATGSKKPRWRA-----QKSAAAGSKNRGA---------GAQKAAAAAG 165
Query: 227 ARGQG-----RGAAAGPERPPHVQGRRPAPRGA--------VGARRALLGAVGKAGGLTR 273
+ QG + AAAG + G++P RGA G +R GK G R
Sbjct: 166 VKSQGGEKPQKAAAAGAKSR---SGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRR 222
Query: 274 ARETRRRGEEGVPAAG 289
+ R + PAAG
Sbjct: 223 KKHRRPK-----PAAG 233
Score = 31.6 bits (70), Expect = 1.0
Identities = 51/193 (26%), Positives = 68/193 (35%), Gaps = 35/193 (18%)
Query: 149 SAGHLGREPPRGGGL-RPPALVPVPLATPLL---------LEGRSEPSTRACAVSGGQAA 198
+AG G P G L R P + A P L L + R A +GG+ A
Sbjct: 12 AAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKA 71
Query: 199 LLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG---AAAGPERPPHVQGRRPAPRGAV 255
L + AR +KA GA +G G AAA + +GR+P RG
Sbjct: 72 RLRGQKGAVAGKEAR--QHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK 129
Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVSVLVRH 315
A A G RA+++ G + A Q+ A V+
Sbjct: 130 AA------ATGSKKPRWRAQKSAAAGSKNRGAGA------QKAAAAAGVK--------SQ 169
Query: 316 DGPLPLSAAALGA 328
G P AAA GA
Sbjct: 170 GGEKPQKAAAAGA 182
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 48.5 bits (114), Expect = 8e-06
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGLRPPALVPV------PLATPLLL 179
P PP + G + L L R+ P R G PP LVP+ PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205
Query: 180 EGRSEPS------TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
GR+ S T A ++ Q LGAH RPA ++A + R
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253
Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
AAA ++PP R PA + A A L A G A ++R GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296
>gi|116734704 interferon regulatory factor 2 binding protein 2
isoform A [Homo sapiens]
Length = 587
Score = 48.5 bits (114), Expect = 8e-06
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 33/170 (19%)
Query: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPP--RGGGLRPPALVPV------PLATPLLL 179
P PP + G + L L R+ P R G PP LVP+ PL T L L
Sbjct: 146 PTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLMNGSATPLPTALGL 205
Query: 180 EGRSEPS------TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRG 233
GR+ S T A ++ Q LGAH RPA ++A + R
Sbjct: 206 GGRAAASLAAVSGTAAASLGSAQPTDLGAHKRPA------------SVSSSAAVEHEQRE 253
Query: 234 AAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEE 283
AAA ++PP R PA + A A L A G A ++R GE+
Sbjct: 254 AAAKEKQPPPPAHRGPADSLSTAAGAAELSAEG-------AGKSRGSGEQ 296
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 48.1 bits (113), Expect = 1e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G LRP A P P
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128
Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
G ++ + AP AAR AP RA G+ G+RGQG
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 48.1 bits (113), Expect = 1e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G LRP A P P
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128
Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
G ++ + AP AAR AP RA G+ G+RGQG
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 48.1 bits (113), Expect = 1e-05
Identities = 75/248 (30%), Positives = 90/248 (36%), Gaps = 71/248 (28%)
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAER 121
TC R+ + R+ERG P AA + A H R AA
Sbjct: 43 TCRLTRSRKSRLERG-----------TFSPESAAGTEVSGAPHPDSRTRPAA-------- 83
Query: 122 GLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPR------GGGLRPPALVPVPLAT 175
R PR +PP GR G+ SA PPR G LRP A P P
Sbjct: 84 --RPPHPRTRSPP-----GRSGSGTTFSA-----VPPRPSQHQSGSRLRPAAPGPRP--- 128
Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAP-RAKKAGANAGARGQG--- 231
G ++ + AP AAR AP RA G+ G+RGQG
Sbjct: 129 -------------------GCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQ 169
Query: 232 ---RGAAAGPERPPHVQGR-RPAP-RGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
R + AG + PP R R AP R A RR L + G T AR G G P
Sbjct: 170 VGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP 229
Query: 287 ---AAGTP 291
AA +P
Sbjct: 230 GTAAASSP 237
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 47.8 bits (112), Expect = 1e-05
Identities = 82/304 (26%), Positives = 107/304 (35%), Gaps = 67/304 (22%)
Query: 21 GVTCRVSSQDGDRRGLGR------EAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVE 74
GV + + G RR LGR EA+PG + +G R P P R + G+
Sbjct: 71 GVGAALLALPGSRR-LGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGK-- 127
Query: 75 RGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAV----RDAERGLRREGPRR 130
RPA A P P ++ R V +R + R R R RR
Sbjct: 128 -------RPAAAARAAP-PRQRSLARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRR 179
Query: 131 HAPPRKQLRGRRGAAGLVSAGHLGREPPR----GGGLRPPALVPVPLATPLLLEGRSEPS 186
P L+ R G+A PPR G R P+L P P
Sbjct: 180 PLPKPPPLQPRLGSA----------SPPRLAAPLAGSRAPSLSPFP-------------- 215
Query: 187 TRACAVSGGQAALLGAHVRPAPDRAAR----CAPRAKKAGANAGARGQGRGAAAGPERPP 242
R C ++ H P P +R R ++ G RG+ +G A G PP
Sbjct: 216 -RRCRRRAERSP--AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALG--SPP 270
Query: 243 HVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPR------CLQQ 296
G PA G G RRA + GG + +G EGV TPR CL+
Sbjct: 271 IPAG--PAAPGRAGERRAARQWRKRGGGPGVSPREGAQG-EGVRGGVTPRARGSSTCLRP 327
Query: 297 EGAT 300
AT
Sbjct: 328 SPAT 331
Score = 30.0 bits (66), Expect = 3.0
Identities = 38/128 (29%), Positives = 48/128 (37%), Gaps = 18/128 (14%)
Query: 166 PALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
P + P P EG P C+ + A + PAP R A + A A
Sbjct: 19 PEVAPQP-------EGTDAPGPAVCSPT----ARAPPPILPAPQRPPTRAREWEGAAWAA 67
Query: 226 GARGQGRGAAAGP-----ERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRR 280
GA G G A P R P + R +P A GA RA G+ G+ G R R
Sbjct: 68 GATGVGAALLALPGSRRLGRVP-LTFREASPGPAPGAPRA-RGSCGREPGPRRRRAPSSA 125
Query: 281 GEEGVPAA 288
G+ AA
Sbjct: 126 GKRPAAAA 133
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 47.0 bits (110), Expect = 2e-05
Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)
Query: 8 KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
K KT C R D R S Q G++ +A AP +E+G++S PT R
Sbjct: 33 KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84
Query: 67 RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
+T RGR +GA E AG A P P A+ + + R L
Sbjct: 85 KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143
Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
+R A + + G +GP PPR G R G +A L GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199
Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
PA +P P R P C + AA L RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251
Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
P+R R A R + +G RG +G A A P+ P + A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306
Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
+ G+ G L RE R+R AAG RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 47.0 bits (110), Expect = 2e-05
Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)
Query: 8 KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
K KT C R D R S Q G++ +A AP +E+G++S PT R
Sbjct: 33 KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84
Query: 67 RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
+T RGR +GA E AG A P P A+ + + R L
Sbjct: 85 KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143
Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
+R A + + G +GP PPR G R G +A L GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199
Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
PA +P P R P C + AA L RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251
Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
P+R R A R + +G RG +G A A P+ P + A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306
Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
+ G+ G L RE R+R AAG RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 47.0 bits (110), Expect = 2e-05
Identities = 94/341 (27%), Positives = 122/341 (35%), Gaps = 82/341 (24%)
Query: 8 KNKTTCLRGSDTAGVTCRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTC-SRG 66
K KT C R D R S Q G++ +A AP +E+G++S PT R
Sbjct: 33 KGKTICTRFGDK-----RSSGQAGNKSERELQARTPAPP---RERGESSSPRGPTLRGRA 84
Query: 67 RTERGRVERGADHQERPAG--APAHRPVPAAAAILRAAV----------------HRVLR 108
+T RGR +GA E AG A P P A+ + + R L
Sbjct: 85 KTTRGR-SQGAGATETSAGNSAATAAPHPTPASYPQGTISPPQLPAPRPKRFGGKQRPLW 143
Query: 109 VLRA----AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLR 164
+R A + + G +GP PPR G R G +A L GLR
Sbjct: 144 RIRGWETTVARLPEPRVGKLGKGP----PPRPAPPGTRCCPGARAAQLLREAAAAAQGLR 199
Query: 165 PPAL-VPVPLATPLLLEGRSEPSTRACAVSGGQAA-----------------LLGAHVRP 206
PA +P P R P C + AA L RP
Sbjct: 200 APAARLPEPT--------RRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTRP 251
Query: 207 A--PDRAARCAPRAKKAGANAGARG---QGRGAAAGPERPPHVQGRRPAPRGAVGARRAL 261
P+R R A R + +G RG +G A A P+ P + A GARRAL
Sbjct: 252 RKHPERTRRPAQRLE-----SGCRGHCSRGAPALAPPKLSPPFPCLAQSASRAAGARRAL 306
Query: 262 LGAVGKAG---------GLTRARETRRRGEEGVPAAGTPRC 293
+ G+ G L RE R+R AAG RC
Sbjct: 307 SASRGRRGLLGSGSLALPLPGCREPRQRLHGSDGAAGA-RC 346
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.6 bits (109), Expect = 3e-05
Identities = 72/305 (23%), Positives = 100/305 (32%), Gaps = 85/305 (27%)
Query: 38 REAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAA 97
R+A+PG +G + + P P G + G ++PAG PA + P
Sbjct: 424 RDASPG--------RGSHGQTPSP---------GALPLGRQTSQQPAGPPAQQRPPPQGG 466
Query: 98 ILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREP 157
+ GP+R PP +Q R P
Sbjct: 467 PPQPG-----------------------PGPQRQGPPLQQ-----------------RPP 486
Query: 158 PRG----GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRP------A 207
P+G GL PPA P+P P +P+++A + GQ G RP A
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ----GRQSRPVAGGPGA 542
Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
P A P + AG R + PP G P + G + G G
Sbjct: 543 PPAAR--PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG- 599
Query: 268 AGGLTRARETRRRGEEG-VPAAGTPRCLQ--QEGATQVAVRLPLVSVLVRHDGPLPLSAA 324
TR+ + G VP G P Q G P ++ D P P +AA
Sbjct: 600 --------PTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAA 651
Query: 325 ALGAP 329
A G P
Sbjct: 652 AGGPP 656
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 3e-05
Identities = 72/305 (23%), Positives = 100/305 (32%), Gaps = 85/305 (27%)
Query: 38 REAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAA 97
R+A+PG +G + + P P G + G ++PAG PA + P
Sbjct: 424 RDASPG--------RGSHGQTPSP---------GALPLGRQTSQQPAGPPAQQRPPPQGG 466
Query: 98 ILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREP 157
+ GP+R PP +Q R P
Sbjct: 467 PPQPG-----------------------PGPQRQGPPLQQ-----------------RPP 486
Query: 158 PRG----GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRP------A 207
P+G GL PPA P+P P +P+++A + GQ G RP A
Sbjct: 487 PQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQ----GRQSRPVAGGPGA 542
Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
P A P + AG R + PP G P + G + G G
Sbjct: 543 PPAAR--PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAG- 599
Query: 268 AGGLTRARETRRRGEEG-VPAAGTPRCLQ--QEGATQVAVRLPLVSVLVRHDGPLPLSAA 324
TR+ + G VP G P Q G P ++ D P P +AA
Sbjct: 600 --------PTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAA 651
Query: 325 ALGAP 329
A G P
Sbjct: 652 AGGPP 656
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 46.2 bits (108), Expect = 4e-05
Identities = 84/288 (29%), Positives = 96/288 (33%), Gaps = 48/288 (16%)
Query: 34 RGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRV-ERGADHQERPAGAPAHRPV 92
+GL A P A E+G P S R ERG ERG PAG
Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 702
Query: 93 PAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS-AG 151
P + G + AP + + G RGAAGL G
Sbjct: 703 PGNDGA-------------------KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 743
Query: 152 HLGREPPRGG----------GLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLG 201
G P+G GL P P P P +G S PS A G G
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP-GDKGESGPSGPAGPT--GARGAPG 800
Query: 202 AHVRPAPDRAARCA--------PRAKKAGANAGARGQ-GRGAAAGPERPPHVQGRRPAPR 252
P P A A P AK +AGA+G G AGP PP G AP
Sbjct: 801 DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAP- 859
Query: 253 GAVGARRAL--LGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEG 298
GA GAR + GA G G R G G P G P +EG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPP--GPPGPAGKEG 905
Score = 40.4 bits (93), Expect = 0.002
Identities = 53/166 (31%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Query: 132 APPRKQLRGRRGAAGLVSA----GHLGREPPRGGGLRP-PALVPVPLATPLLLEGRSEPS 186
AP K G +G G V G G E RG P P +P P R P
Sbjct: 438 APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Query: 187 TRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG-QGRGAAAGPER---PP 242
A G A G+ P + A R +AG GA+G G + GP+ PP
Sbjct: 498 ADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGL-PGAKGLTGSPGSPGPDGKTGPP 556
Query: 243 HVQGR--RPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
G+ RP P G GAR G +G G A E + GE GVP
Sbjct: 557 GPAGQDGRPGPPGPPGAR-GQAGVMGFPGPKGAAGEPGKAGERGVP 601
Score = 40.4 bits (93), Expect = 0.002
Identities = 87/322 (27%), Positives = 108/322 (33%), Gaps = 63/322 (19%)
Query: 31 GDRRGLGREAAPGAPAEGEKEKGKNSRRPRPTCSRGRT-ERG----RVERGADHQERPAG 85
G+ +G + PG PA E ++G P PT G ERG R GAD P G
Sbjct: 449 GEPGPVGVQGPPG-PAGEEGKRGARGE-PGPTGLPGPPGERGGPGSRGFPGADGVAGPKG 506
Query: 86 APAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAA 145
R P A + A R E GL P K L G G+
Sbjct: 507 PAGERGSPGPAGPKGSP----------GEAGRPGEAGL---------PGAKGLTGSPGSP 547
Query: 146 GLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVR 205
G G G P G RP P P P + A G+A G
Sbjct: 548 G--PDGKTGPPGPAGQDGRPGP--PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGV--- 600
Query: 206 PAPDRAARCAPRAKKAGAN--------AGARGQGRGAAA-------GPERPPHVQGRRPA 250
P P A A + +AGA AG RG+ A + GP PP G+ P
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK-PG 659
Query: 251 PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVRLPLVS 310
+G G LGA G +G RG +G P PR A
Sbjct: 660 EQGVPGD----LGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGA------- 708
Query: 311 VLVRHDGPLPLSAAALGAPGLR 332
+ D P + + GAPGL+
Sbjct: 709 ---KGDAGAPGAPGSQGAPGLQ 727
Score = 38.9 bits (89), Expect = 0.007
Identities = 69/284 (24%), Positives = 89/284 (31%), Gaps = 38/284 (13%)
Query: 37 GREAAPGAPAEGEKEKGKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAA 96
G + PG P E R P + + + G + P G R +P A
Sbjct: 200 GFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259
Query: 97 AILRAAVHRVLRVLRAA--------------------AAVRDAERGLRREGPRRHAPPRK 136
+ HR L A A + RGL E R AP
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPA 319
Query: 137 QLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQ 196
RG GA G +AG G P G PP P + + E + S G
Sbjct: 320 GARGNDGATG--AAGPPGPTGPAG----PPGF-------PGAVGAKGEAGPQGPRGSEGP 366
Query: 197 AALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR-PAPRGAV 255
+ G P P A A A GA+ +G A G P G R P+
Sbjct: 367 QGVRG---EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGP 423
Query: 256 GARRALLGAVGKAGGLTRARETRRRGEEG-VPAAGTPRCLQQEG 298
G G G+ G +T +GE G V G P +EG
Sbjct: 424 GGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEG 467
Score = 38.5 bits (88), Expect = 0.008
Identities = 72/266 (27%), Positives = 86/266 (32%), Gaps = 65/266 (24%)
Query: 37 GREAAPGAPAEGEKEKGKNSR-------RPRPTCSRGRTERGRVERGADHQERPAGAPAH 89
G PG P KE GK R RP G E+G+ + PAGAP
Sbjct: 890 GNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG-EKGSPGADGPAGAPG- 947
Query: 90 RPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVS 149
P P A R V GL + RG RG GL
Sbjct: 948 TPGPQGIAGQRGVV------------------GLPGQ------------RGERGFPGLPG 977
Query: 150 -AGHLGREPPRG-GGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPA 207
+G G++ P G G R P P P+ P L E G+ GA P
Sbjct: 978 PSGEPGKQGPSGASGERGP---PGPMGPPGLAGPPGE---------SGREGAPGAEGSPG 1025
Query: 208 PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR----PA----PRGAVGARR 259
D + + G G A GP P G R PA P G VGAR
Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGAR- 1084
Query: 260 ALLGAVGKAGGLTRARETRRRGEEGV 285
G G G ET +G+ G+
Sbjct: 1085 ---GPAGPQGPRGDKGETGEQGDRGI 1107
Score = 37.7 bits (86), Expect = 0.014
Identities = 58/203 (28%), Positives = 65/203 (32%), Gaps = 35/203 (17%)
Query: 126 EGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLA----TPLLLEG 181
EGP+ PR G RG AG + +P G PP P P L G
Sbjct: 111 EGPKGDTGPR----GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYG 166
Query: 182 RSEPSTRACAVSG-----GQAALLGAHVRPAPD--RAARCAPRAKKAGANAGARGQ---- 230
E ST +V G G L G P P + P A G RG
Sbjct: 167 YDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPP 226
Query: 231 ---------GRGAAAGPERPPHVQGRR--PAPRGAVGAR-----RALLGAVGKAGGLTRA 274
G+ G PP QG R P G G + L GA G AG
Sbjct: 227 GKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPK 286
Query: 275 RETRRRGEEGVPAAGTPRCLQQE 297
E GE G P PR L E
Sbjct: 287 GEPGSPGENGAPGQMGPRGLPGE 309
Score = 32.3 bits (72), Expect = 0.61
Identities = 59/192 (30%), Positives = 61/192 (31%), Gaps = 37/192 (19%)
Query: 118 DAERGLRREGPRRHAPPRKQLRGRRGAAGLVSA-GHLGREPPRGG-GLRPPALVPVPLAT 175
D E G R P + RG G AGL GH G G G PA P
Sbjct: 232 DGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPA---GPKGE 288
Query: 176 PLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQ-GRGA 234
P P G L G RP A AGARG G
Sbjct: 289 P------GSPGENGAPGQMGPRGLPGERGRPG-------------APGPAGARGNDGATG 329
Query: 235 AAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPA------- 287
AAGP P G P GAVGA+ G G G RGE G P
Sbjct: 330 AAGPPGPTGPAGPPGFP-GAVGAK----GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGP 384
Query: 288 AGTPRCLQQEGA 299
AG P Q GA
Sbjct: 385 AGNPGADGQPGA 396
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 46.2 bits (108), Expect = 4e-05
Identities = 66/267 (24%), Positives = 99/267 (37%), Gaps = 41/267 (15%)
Query: 24 CRVSSQDGDRRGLGREAAPGAPAEGEKEKGKNSRR-PRPTCSRGRTERGRVERGADHQER 82
C+ + G RRG G ++P A +G +++ + + P PT RTE+ + ++ Q R
Sbjct: 41 CQPAGGTGQRRGSG--SSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQP---QRR 95
Query: 83 PAGAPAHR--PVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQLRG 140
PAG R +++A + A R A A R +R+ + P
Sbjct: 96 PAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTGQ 155
Query: 141 RRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAALL 200
RRG+ SA + PVP ++ E R + C +GG
Sbjct: 156 RRGSGCSPSADQQRAQDRE----EEATAAPVPTSSGHRTEKRKRLQLQ-CQPAGGTGQRR 210
Query: 201 GAHVRPAPD--------RAARCAPRAKKAGAN-------------AGARGQGRGAAAGPE 239
G+ P+ R +R +P A + A AG GQ RG AA P
Sbjct: 211 GSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQRRGTAAAPV 270
Query: 240 RPPHVQGRR------PAPRG-AVGARR 259
G+R PAP G RR
Sbjct: 271 PTTGGTGQRRGTAAAPAPTSTGTGQRR 297
Score = 38.9 bits (89), Expect = 0.007
Identities = 51/203 (25%), Positives = 68/203 (33%), Gaps = 38/203 (18%)
Query: 112 AAAAVRDAERGLRREGPRRHAPPRKQLRG---RRGAAGLVSAGHLGREPPRGGGLRPPAL 168
AAAA RG R E + P R+ G RRG+ SA G + A
Sbjct: 71 AAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDRE----EEAAA 126
Query: 169 VPVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRA--------ARCAPRAKK 220
P P ++ E R +P C + G G+ P+ D+ A AP
Sbjct: 127 APAPTSSGHRTEKR-KPQQPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPTS 185
Query: 221 AGAN-------------AGARGQGRGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGK 267
+G AG GQ RG+ + P R P G G RR +
Sbjct: 186 SGHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSR---------QPAGGTGQRRGSRSSPSA 236
Query: 268 AGGLTRARETRRRGEEGVPAAGT 290
+ RE + PA GT
Sbjct: 237 DQQRAQDREEEAAQPQRRPAGGT 259
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 45.8 bits (107), Expect = 5e-05
Identities = 73/268 (27%), Positives = 96/268 (35%), Gaps = 51/268 (19%)
Query: 26 VSSQDGDRRGLGREAAPGAPAEGEK---EKGKNSRRPRPTCSRG----RTERGRVERGAD 78
+SS D R R +P EG K ++ SR P P+ G + G +R
Sbjct: 265 LSSHYSDSRSPSR-LSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGA 323
Query: 79 HQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAVRDAERGLRREGPRRHAPPRKQL 138
H RP A + P++ + +R AAAA RG +E P + P Q
Sbjct: 324 HGGRPGSAHSPPDKPSSPSPR-------VRDKAAAAAPTPPARG--KESPSPRSAPSSQG 374
Query: 139 RGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRACAVSGGQAA 198
RG R A G AG R R R A P GR P
Sbjct: 375 RGGRAAGG---AGRRRRRRRRRRRSRSSASAP-------RRRGRRRP------------- 411
Query: 199 LLGAHVRPAPDR-AARCAPRAKKAGANAGARG-QGRGAAAGPERPPHVQGRRP---APRG 253
RPAP R ++R RA+ + + RG G G G ER G+R PR
Sbjct: 412 ------RPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRA 465
Query: 254 AVGARRALLGAVGKAGGLTRARETRRRG 281
+ GA G+ GG +R G
Sbjct: 466 RPASTSPSPGAHGRRGGPEGKSSSRSPG 493
Score = 33.9 bits (76), Expect = 0.21
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 23/107 (21%)
Query: 193 SGGQAALLGAHV-RPA-----PDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQG 246
+GG GAH RP PD+ + +PR + + AAA P PP
Sbjct: 314 NGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRD-----------KAAAAAPT-PPARGK 361
Query: 247 RRPAPRGAVGARRALLGAVGK-AGGLTRARETRRRGEEGVPAAGTPR 292
P+PR A ++ G G+ AGG R R RRR +A PR
Sbjct: 362 ESPSPRSAPSSQ----GRGGRAAGGAGRRRRRRRRRRRSRSSASAPR 404
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 45.1 bits (105), Expect = 9e-05
Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
R A G GP RH LRG AA +A LG PP L P +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268
Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
PL P S + R C V+ Q++ +H R PRA A A R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328
Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
G A P P ++ G P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351
>gi|239752280 PREDICTED: similar to family with sequence similarity
48, member B2 [Homo sapiens]
Length = 779
Score = 45.1 bits (105), Expect = 9e-05
Identities = 58/209 (27%), Positives = 78/209 (37%), Gaps = 38/209 (18%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
GK + P P ++ + G++ G + AG+P RP PAAA + AA
Sbjct: 417 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 475
Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
AAAAV A G ++ + P + RR AAG RP
Sbjct: 476 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 518
Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--GQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
V + P + +A V G A +LG +P AP A A A
Sbjct: 519 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 568
Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
G G G ++ GP RP VQ PAP
Sbjct: 569 GISGSGLQSSGGPLPDARPGAVQASSPAP 597
Score = 30.0 bits (66), Expect = 3.0
Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)
Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRA 189
+H PPR QL ++G +S+G+ PP+ G P P P A P +
Sbjct: 421 KHPPPRTQLPS---SSGKISSGN--SFPPQQAG--SPLKRPFPAAAPAV----------- 462
Query: 190 CAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
A PAP A AP A A A G + P P RR
Sbjct: 463 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 510
Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
PA P V A+ G G E RG + + + P +Q G+ A
Sbjct: 511 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 568
Query: 306 LPLVSVLVRHDGPLP 320
S L GPLP
Sbjct: 569 GISGSGLQSSGGPLP 583
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 45.1 bits (105), Expect = 9e-05
Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
R A G GP RH LRG AA +A LG PP L P +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268
Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
PL P S + R C V+ Q++ +H R PRA A A R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328
Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
G A P P ++ G P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 45.1 bits (105), Expect = 9e-05
Identities = 59/203 (29%), Positives = 70/203 (34%), Gaps = 23/203 (11%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRA 112
G SR R GR+ R R RG RP P H A +
Sbjct: 168 GPESRAARQGLG-GRSARARTRRGPHRTRRPEPGPHHTGARQAGPL-----------PGT 215
Query: 113 AAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPP--ALVP 170
R A G GP RH LRG AA +A LG PP L P +L
Sbjct: 216 RGRTRAAGTGSAARGPARH------LRGGSVAAA-AAARCLGLSPPGRSRLFSPRSSLAR 268
Query: 171 VPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGAR-G 229
PL P S + R C V+ Q++ +H R PRA A A R G
Sbjct: 269 PPLRFPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPG 328
Query: 230 QGRGAAAGPERPPHVQ-GRRPAP 251
G A P P ++ G P P
Sbjct: 329 LDPGPAPYPLTPAALRPGTSPHP 351
>gi|210032463 family with sequence similarity 48, member B2 [Homo
sapiens]
Length = 817
Score = 45.1 bits (105), Expect = 9e-05
Identities = 58/209 (27%), Positives = 78/209 (37%), Gaps = 38/209 (18%)
Query: 53 GKNSRRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHR-----VL 107
GK + P P ++ + G++ G + AG+P RP PAAA + AA
Sbjct: 455 GKGEKHPPPR-TQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPAA 513
Query: 108 RVLRAAAAVRDAERGLRREGPRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPA 167
AAAAV A G ++ + P + RR AAG RP
Sbjct: 514 APALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRRPAAG-----------------RPTR 556
Query: 168 LVPVPLATPLLLEGRSEPSTRACAVSG--GQAALLGAHVRPAPDRAARCAPRAKKAGANA 225
V + P + +A V G A +LG +P AP A A A
Sbjct: 557 FVKI---APAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKPVQ------AP-GSGAPAPA 606
Query: 226 GARGQGRGAAAGP---ERPPHVQGRRPAP 251
G G G ++ GP RP VQ PAP
Sbjct: 607 GISGSGLQSSGGPLPDARPGAVQASSPAP 635
Score = 30.0 bits (66), Expect = 3.0
Identities = 52/195 (26%), Positives = 67/195 (34%), Gaps = 36/195 (18%)
Query: 130 RHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPSTRA 189
+H PPR QL ++G +S+G+ PP+ G P P P A P +
Sbjct: 459 KHPPPRTQLPS---SSGKISSGN--SFPPQQAG--SPLKRPFPAAAPAV----------- 500
Query: 190 CAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERP-PHVQGRR 248
A PAP A AP A A A G + P P RR
Sbjct: 501 ------------AAAAPAPAPAPAAAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASRRR 548
Query: 249 PA---PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVPAAGTPRCLQQEGATQVAVR 305
PA P V A+ G G E RG + + + P +Q G+ A
Sbjct: 549 PAAGRPTRFVKIAPAIQVRTGSTGLKATNVEGPVRGAQVLGCSFKP--VQAPGSGAPAPA 606
Query: 306 LPLVSVLVRHDGPLP 320
S L GPLP
Sbjct: 607 GISGSGLQSSGGPLP 621
>gi|110681708 zinc finger protein 579 [Homo sapiens]
Length = 562
Score = 44.7 bits (104), Expect = 1e-04
Identities = 51/174 (29%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 21 GVTCRVSSQDGDRRGLGREAAPGAPAEGEK-----EKGKNSRR-------------PRP- 61
G C +S+ G+ + G +AAP P GE E GK RR RP
Sbjct: 354 GAECGGASEGGEGQN-GGDAAPARPPAGEPRFWCPECGKGFRRRAHLRQHGVTHSGARPF 412
Query: 62 TCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAA--VHRVLRVLRAAAAVRDA 119
C R + E R+ A H + AG PA P P A + R R RA A
Sbjct: 413 QCVRCQREFKRLADLARHAQVHAGGPAPHPCPRCPRRFSRAYSLLRHQRCHRAELERAAA 472
Query: 120 ERGLRREGPRRHAPPRKQLRGRRGAAGL-VSAGHLGREPPRGGGLRPPALVPVP 172
+ L+ + P PP L+ + GL + ++ EPP G PP P P
Sbjct: 473 LQALQAQAPTSPPPPPPPLKAEQEEEGLPLPLANIKEEPPSPG--TPPQSPPAP 524
Score = 29.6 bits (65), Expect = 3.9
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 16/90 (17%)
Query: 170 PVPLATPLLLEGRSEPSTRACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG 229
P+ L PL G+ + SG + + G P A C GA+ G G
Sbjct: 322 PLSLLAPLPAAGKKDDKA-----SGARNSAKG----PEGGEGAECG------GASEGGEG 366
Query: 230 QGRGAAAGPERPPHVQGRRPAPRGAVGARR 259
Q G AA P RPP + R P G RR
Sbjct: 367 QNGGDAA-PARPPAGEPRFWCPECGKGFRR 395
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 44.3 bits (103), Expect = 2e-04
Identities = 68/248 (27%), Positives = 89/248 (35%), Gaps = 25/248 (10%)
Query: 57 RRPRPTCSRGRTERGRVERGADHQERPAGAPAHRPVPAAAAILRAAVHRVLRVLRAAAAV 116
R+ RP R T RV A H +P+ A + + V R +
Sbjct: 4 RKVRPEAGRAPTGL-RVPHRAPHILAQLQPNETQPLGAHSTPYGGTLEAVSAFHRLGLGL 62
Query: 117 RDAERGLRREGPRRHAPPRKQL-RGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLAT 175
A R P AP R +L GRR SAGH+ R + PPA PVP T
Sbjct: 63 PIAGRPKAGPSPSPAAPTRPRLLHGRR------SAGHVAR-----ADVSPPA-GPVPAPT 110
Query: 176 PLLLEGRSEPSTRACAVSGG----QAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQG 231
P P A ++ G AALL + A + R P + R
Sbjct: 111 PPRARNAETPWNAASLLNRGCCWGAAALLIGRLLGANQKRQRMPPLPPSSPKARMERASR 170
Query: 232 RGAAAGPERPPHVQGRRPAPRGAVGARRALLGAVGKAGG-----LTRARET--RRRGEEG 284
+ + RPPH RP PR G R A G+ G R +++ RRR G
Sbjct: 171 KLPSRVNSRPPHPAPTRPTPRVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPG 230
Query: 285 VPAAGTPR 292
PA + R
Sbjct: 231 PPALRSGR 238
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,962,602
Number of Sequences: 37866
Number of extensions: 967885
Number of successful extensions: 7647
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 813
Number of HSP's that attempted gapping in prelim test: 6287
Number of HSP's gapped (non-prelim): 1904
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.