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Search of human proteins with 239749075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749075 PREDICTED: hypothetical protein [Homo sapiens]
(186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754514 PREDICTED: hypothetical protein [Homo sapiens] 399 e-112
gi|239749075 PREDICTED: hypothetical protein [Homo sapiens] 399 e-112
gi|239743101 PREDICTED: hypothetical protein [Homo sapiens] 399 e-112
gi|239508755 PREDICTED: hypothetical protein [Homo sapiens] 399 e-112
gi|116284392 mucin 2 precursor [Homo sapiens] 34 0.083
gi|150378481 hypothetical protein LOC653567 [Homo sapiens] 33 0.11
gi|239744008 PREDICTED: hypothetical protein XP_002343016 isofor... 33 0.11
gi|239744006 PREDICTED: hypothetical protein XP_002343015 isofor... 33 0.11
gi|33286436 gametogenetin [Homo sapiens] 31 0.70
gi|229093316 phospholipase B domain containing 2 isoform 1 precu... 30 0.92
gi|229091322 phospholipase B domain containing 2 isoform 2 precu... 30 0.92
gi|98986457 host cell factor 1 [Homo sapiens] 30 0.92
gi|21389623 prominin 2 [Homo sapiens] 30 0.92
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 30 1.2
gi|4557733 latent transforming growth factor beta binding protei... 30 1.6
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 29 2.0
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 29 2.0
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 29 2.0
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 29 2.0
gi|30578416 ring finger protein 113B [Homo sapiens] 29 2.7
gi|239743256 PREDICTED: hypothetical protein XP_002342781 [Homo ... 28 3.5
gi|239508931 PREDICTED: hypothetical protein [Homo sapiens] 28 3.5
gi|34740327 zinc finger protein 804A [Homo sapiens] 28 4.6
gi|167736355 mucin 4 isoform a [Homo sapiens] 28 4.6
gi|17941285 solute carrier family 5 (sodium/glucose cotransporte... 28 4.6
gi|149408117 hypothetical protein LOC124783 [Homo sapiens] 28 4.6
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 28 5.9
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 28 5.9
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 28 5.9
gi|51972258 ets variant 3-like [Homo sapiens] 28 5.9
>gi|239754514 PREDICTED: hypothetical protein [Homo sapiens]
Length = 260
Score = 399 bits (1026), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS
Sbjct: 75 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 134
Query: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA
Sbjct: 135 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 194
Query: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ
Sbjct: 195 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 254
Query: 181 VYLPVV 186
VYLPVV
Sbjct: 255 VYLPVV 260
>gi|239749075 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 399 bits (1026), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS
Sbjct: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
Query: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA
Sbjct: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
Query: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ
Sbjct: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
Query: 181 VYLPVV 186
VYLPVV
Sbjct: 181 VYLPVV 186
>gi|239743101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 399 bits (1026), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS
Sbjct: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
Query: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA
Sbjct: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
Query: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ
Sbjct: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
Query: 181 VYLPVV 186
VYLPVV
Sbjct: 181 VYLPVV 186
>gi|239508755 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 399 bits (1026), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS
Sbjct: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVS 60
Query: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA
Sbjct: 61 REVYCPGIGDVCIKEGFGVQKQEDVLWRCCWQKQLALTKQTKSSYRSRGNRVKADALAQA 120
Query: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ
Sbjct: 121 WAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQ 180
Query: 181 VYLPVV 186
VYLPVV
Sbjct: 181 VYLPVV 186
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 33.9 bits (76), Expect = 0.083
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 7/122 (5%)
Query: 55 STVKVSREVYCP-GIGDVCIKEG------FGVQKQEDVLWRCCWQKQLALTKQTKSSYRS 107
S ++ ++V C +G +C E FG+ + CCW +T + +
Sbjct: 1347 SLEQLGQKVQCDVSVGFICKNEDQFGNGPFGLCYDYKIRVNCCWPMDKCITTPSPPTTTP 1406
Query: 108 RGNRVKADALAQAWAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVP 167
L +T T PT+ +T++ P PTT S P T P P
Sbjct: 1407 SPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPP 1466
Query: 168 LT 169
T
Sbjct: 1467 TT 1468
Score = 32.3 bits (72), Expect = 0.24
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 128 STWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
+T T PT+ S +T++ PS TT S PP T P P T
Sbjct: 1694 TTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTT 1735
Score = 27.3 bits (59), Expect = 7.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 135 PTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLL 171
PT+ T++ P TT+++LPP T + P+ T L
Sbjct: 1725 PTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPL 1761
>gi|150378481 hypothetical protein LOC653567 [Homo sapiens]
Length = 351
Score = 33.5 bits (75), Expect = 0.11
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 119 QAWAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDI 178
+ W +L M LT+LP VT ++ + LP + P PV L LL I+ DI
Sbjct: 84 KGWRPVLMMCVVLTTLPCLTFSIAVTEVQKSINGSADVLPDMLPDLPVSLVLLSLIMVDI 143
>gi|239744008 PREDICTED: hypothetical protein XP_002343016 isoform 2
[Homo sapiens]
Length = 274
Score = 33.5 bits (75), Expect = 0.11
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 119 QAWAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDI 178
+ W +L M LT+LP VT ++ + LP + P PV L LL I+ DI
Sbjct: 84 KGWRPVLMMCVVLTTLPCLTFSIAVTEVQKSINGSADVLPDMLPDLPVSLVLLSLIMVDI 143
>gi|239744006 PREDICTED: hypothetical protein XP_002343015 isoform 1
[Homo sapiens]
Length = 351
Score = 33.5 bits (75), Expect = 0.11
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 119 QAWAALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDI 178
+ W +L M LT+LP VT ++ + LP + P PV L LL I+ DI
Sbjct: 84 KGWRPVLMMCVVLTTLPCLTFSIAVTEVQKSINGSADVLPDMLPDLPVSLVLLSLIMVDI 143
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 30.8 bits (68), Expect = 0.70
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 123 ALLHMSTWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVP 167
ALL T++ PT+G RP P L LPPL P P P
Sbjct: 409 ALLAPPTFIFPAPTNG------EPMRPGPPGLQELPPLPPPTPPP 447
>gi|229093316 phospholipase B domain containing 2 isoform 1
precursor [Homo sapiens]
Length = 589
Score = 30.4 bits (67), Expect = 0.92
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSP--GLNHLGLPKCWDYSPSTVK 58
M L+ + S+ +A W PP + W+ SP GL H+G P W ++P VK
Sbjct: 538 MSLARILSLLAASGPTWDQVPPFQ----------WSTSPFSGLLHMGQPDLWKFAP--VK 585
Query: 59 VS 60
VS
Sbjct: 586 VS 587
>gi|229091322 phospholipase B domain containing 2 isoform 2
precursor [Homo sapiens]
Length = 557
Score = 30.4 bits (67), Expect = 0.92
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 1 MWLSSMCSMRSARVGKWSPQPPNRQRWSFAICPGWTRSP--GLNHLGLPKCWDYSPSTVK 58
M L+ + S+ +A W PP + W+ SP GL H+G P W ++P VK
Sbjct: 506 MSLARILSLLAASGPTWDQVPPFQ----------WSTSPFSGLLHMGQPDLWKFAP--VK 553
Query: 59 VS 60
VS
Sbjct: 554 VS 555
>gi|98986457 host cell factor 1 [Homo sapiens]
Length = 2035
Score = 30.4 bits (67), Expect = 0.92
Identities = 17/79 (21%), Positives = 33/79 (41%)
Query: 89 CCWQKQLALTKQTKSSYRSRGNRVKADALAQAWAALLHMSTWLTSLPTSGLCSHVTSSRR 148
CC T++ R + R ++L +W A+ ++L L + + ++
Sbjct: 352 CCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATS 411
Query: 149 PSPTTLSSLPPLTPAFPVP 167
P+P + S+P P P P
Sbjct: 412 PTPNPVPSVPANPPKSPAP 430
>gi|21389623 prominin 2 [Homo sapiens]
Length = 834
Score = 30.4 bits (67), Expect = 0.92
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 105 YRSRGNRVKAD--ALAQAWAALLHMSTWLTSLPTSGL-CSHVTSSRRPSPTTLSSLPPLT 161
+R G RVK + ALA AAL+ T L G+ C+ VT+ R T + P
Sbjct: 133 HRRCGGRVKTEHKALACERAALMVFLLLTTLLLLIGVVCAFVTNQR-----THEQMGPSI 187
Query: 162 PAFPVPLTLLWFILPDIEQ 180
A P L LW ++ D+ Q
Sbjct: 188 EAMPETLLSLWGLVSDVPQ 206
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 30.0 bits (66), Expect = 1.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 128 STWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
+T TS PTS S +S +PTT ++ P T PVP T
Sbjct: 1972 TTSTTSAPTSSTTSSPQTSTTSAPTTSTTSGPGTTPSPVPTT 2013
Score = 27.7 bits (60), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 128 STWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
+T +TS PT+ S TSS +PTT ++ P + P T
Sbjct: 1948 TTSITSAPTTSTTSAPTSSTTSAPTTSTTSAPTSSTTSSPQT 1989
Score = 27.3 bits (59), Expect = 7.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 128 STWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
+T TS PTS S T+S +PT+ ++ P T P T
Sbjct: 1956 TTSTTSAPTSSTTSAPTTSTTSAPTSSTTSSPQTSTTSAPTT 1997
>gi|4557733 latent transforming growth factor beta binding protein 2
[Homo sapiens]
Length = 1821
Score = 29.6 bits (65), Expect = 1.6
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 11/79 (13%)
Query: 13 RVGKWSPQPPN-----RQRWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVSREVYCPG 67
R G P PP R CPGWT + NH P C + SR C
Sbjct: 150 RSGAAPPTPPRGRLTGRNVCGGQCCPGWTTANSTNHCIKPVCEPPCQNRGSCSRPQLC-- 207
Query: 68 IGDVCIKEGFGVQKQEDVL 86
VC + GF + E+V+
Sbjct: 208 ---VC-RSGFRGARCEEVI 222
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+++ P+PTT P TP P P T
Sbjct: 406 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 446
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ +P+PTT L P TP P P T
Sbjct: 501 TTPEKPAPTTPEELAPTTPEEPTPTT 526
Score = 28.9 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+ ++P+PTT P TP P P T
Sbjct: 289 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 329
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 135 PTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
PT+ T+S +P+PTT P TP P P T
Sbjct: 670 PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTT 704
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 132 TSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T PTS C +P+PTT P TP P P T
Sbjct: 604 TKEPTSTTCD------KPAPTTPKGTAPTTPKEPAPTT 635
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 257 TTPKEPAPTTTKEPAPTTPKEPAPTT 282
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 351 TAPKKPAPTTPKEPAPTTPKEPAPTT 376
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 367 TTPKEPAPTTTKEPSPTTPKEPAPTT 392
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 437 TTPKKPAPTTPKEPAPTTPKEPAPTT 462
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 453 TTPKEPAPTTTKKPAPTTPKEPAPTT 478
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+++ P+PTT P TP P P T
Sbjct: 447 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 487
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ +P+PTT L P TP P P T
Sbjct: 542 TTPEKPAPTTPEELAPTTPEEPTPTT 567
Score = 28.9 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+ ++P+PTT P TP P P T
Sbjct: 330 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 370
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 135 PTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
PT+ T+S +P+PTT P TP P P T
Sbjct: 711 PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTT 745
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 132 TSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T PTS C +P+PTT P TP P P T
Sbjct: 645 TKEPTSTTCD------KPAPTTPKGTAPTTPKEPAPTT 676
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 298 TTPKEPAPTTTKEPAPTTPKEPAPTT 323
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 392 TAPKKPAPTTPKEPAPTTPKEPAPTT 417
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 408 TTPKEPAPTTTKEPSPTTPKEPAPTT 433
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 478 TTPKKPAPTTPKEPAPTTPKEPAPTT 503
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 494 TTPKEPAPTTTKKPAPTTPKEPAPTT 519
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+++ P+PTT P TP P P T
Sbjct: 499 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 539
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ +P+PTT L P TP P P T
Sbjct: 594 TTPEKPAPTTPEELAPTTPEEPTPTT 619
Score = 28.9 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+ ++P+PTT P TP P P T
Sbjct: 382 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 422
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 135 PTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
PT+ T+S +P+PTT P TP P P T
Sbjct: 763 PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTT 797
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 132 TSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T PTS C +P+PTT P TP P P T
Sbjct: 697 TKEPTSTTCD------KPAPTTPKGTAPTTPKEPAPTT 728
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 350 TTPKEPAPTTTKEPAPTTPKEPAPTT 375
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 444 TAPKKPAPTTPKEPAPTTPKEPAPTT 469
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 460 TTPKEPAPTTTKEPSPTTPKEPAPTT 485
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 530 TTPKKPAPTTPKEPAPTTPKEPAPTT 555
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 546 TTPKEPAPTTTKKPAPTTPKEPAPTT 571
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+++ P+PTT P TP P P T
Sbjct: 540 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 580
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ +P+PTT L P TP P P T
Sbjct: 635 TTPEKPAPTTPEELAPTTPEEPTPTT 660
Score = 28.9 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T S PT+ T+ ++P+PTT P TP P P T
Sbjct: 423 TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 135 PTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
PT+ T+S +P+PTT P TP P P T
Sbjct: 804 PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTT 838
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 132 TSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T PTS C +P+PTT P TP P P T
Sbjct: 738 TKEPTSTTCD------KPAPTTPKGTAPTTPKEPAPTT 769
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 391 TTPKEPAPTTTKEPAPTTPKEPAPTT 416
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 485 TAPKKPAPTTPKEPAPTTPKEPAPTT 510
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 501 TTPKEPAPTTTKEPSPTTPKEPAPTT 526
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ ++P+PTT P TP P P T
Sbjct: 571 TTPKKPAPTTPKEPAPTTPKEPAPTT 596
Score = 27.3 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 144 TSSRRPSPTTLSSLPPLTPAFPVPLT 169
T+ + P+PTT P TP P P T
Sbjct: 587 TTPKEPAPTTTKKPAPTTPKEPAPTT 612
>gi|30578416 ring finger protein 113B [Homo sapiens]
Length = 322
Score = 28.9 bits (63), Expect = 2.7
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 34 GWTRSPGLNHLGLPKCWDYSPSTVKVSREVYCPGIGDVC 72
G R+PG HL WDY P K +E G GD C
Sbjct: 175 GPIRAPG--HLRATVRWDYQPDICKDYKETGFCGFGDSC 211
>gi|239743256 PREDICTED: hypothetical protein XP_002342781 [Homo
sapiens]
Length = 142
Score = 28.5 bits (62), Expect = 3.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Query: 122 AALLHMSTW--LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLL 171
A H TW LT G H+ PS T+ L +TPA P+PL L
Sbjct: 13 ALCTHSPTWPLLTGHQAQGALPHI-----PSSTSRDLLLAVTPAHPLPLRTL 59
>gi|239508931 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 28.5 bits (62), Expect = 3.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Query: 122 AALLHMSTW--LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLL 171
A H TW LT G H+ PS T+ L +TPA P+PL L
Sbjct: 13 ALCTHSPTWPLLTGHQAQGALPHI-----PSSTSRDLLLAVTPAHPLPLRTL 59
>gi|34740327 zinc finger protein 804A [Homo sapiens]
Length = 1209
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 26 RWSFAICPGWTRSPGLNHLGLPKCWDYSPSTVKVSREVYCPGIGDVCIKEGFGVQKQEDV 85
+W + T P +++ P C+D+ + V + + P + D+C + QKQED+
Sbjct: 438 QWPSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDLKDLCSQ-----QKQEDI 492
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 132 TSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLT 169
T LP +GL S T P P T +S A P+P+T
Sbjct: 3743 TPLPVTGLSSASTGDTTPLPVTDTSSASTRHATPLPVT 3780
>gi|17941285 solute carrier family 5 (sodium/glucose cotransporter),
member 11 [Homo sapiens]
Length = 675
Score = 28.1 bits (61), Expect = 4.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 129 TWLTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTL 170
+W T P+ + SH+T R P P PA P+ LTL
Sbjct: 540 SWFTEPPSKEMVSHLTWFTRHDPVVQKEQAP--PAAPLSLTL 579
>gi|149408117 hypothetical protein LOC124783 [Homo sapiens]
Length = 384
Score = 28.1 bits (61), Expect = 4.6
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 18/52 (34%)
Query: 133 SLPTSGLCSH-------------VTSSRRPSPTTLSSLPPLTPAFPVPLTLL 171
++PT+ LCS TSS+ PSP S LPP P+ LT L
Sbjct: 195 AIPTNALCSEEQLQIPDAHSAPPTTSSQAPSPLLSSDLPP-----PIDLTEL 241
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 27.7 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 134 LPTSGLCSHVTSSRRPS-PTTLSSLPPLTPAFPVP 167
LP GL + S+ + P+T+SS PP TP P P
Sbjct: 291 LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAP 325
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 27.7 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 134 LPTSGLCSHVTSSRRPS-PTTLSSLPPLTPAFPVP 167
LP GL + S+ + P+T+SS PP TP P P
Sbjct: 291 LPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAP 325
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 27.7 bits (60), Expect = 5.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 145 SSRRPSPTTLSSLPPLTPAFP 165
SS+ PSPTTL PLTP P
Sbjct: 190 SSQLPSPTTLPRAAPLTPYRP 210
>gi|51972258 ets variant 3-like [Homo sapiens]
Length = 361
Score = 27.7 bits (60), Expect = 5.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 138 GLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLL 171
GLC H+ S + P S PPL P P T L
Sbjct: 214 GLCCHLGSVQGELPGVASFTPPLPPPLPSNWTCL 247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,766,904
Number of Sequences: 37866
Number of extensions: 429452
Number of successful extensions: 1895
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 333
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.