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Search of human proteins with 239748921
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748921 PREDICTED: hypothetical protein XP_002346857 [Homo
sapiens]
(186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748921 PREDICTED: hypothetical protein XP_002346857 [Homo ... 402 e-112
gi|239742943 PREDICTED: hypothetical protein XP_002342700 [Homo ... 402 e-112
gi|239754373 PREDICTED: hypothetical protein XP_002345967 [Homo ... 241 3e-64
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 45 5e-05
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 45 5e-05
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 45 5e-05
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 45 5e-05
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 44 6e-05
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 44 6e-05
gi|91208420 bassoon protein [Homo sapiens] 42 3e-04
gi|50511941 EMI domain containing 1 [Homo sapiens] 41 7e-04
gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo ... 40 0.002
gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo ... 40 0.002
gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo ... 40 0.002
gi|41281612 zinc finger protein 828 [Homo sapiens] 40 0.002
gi|18079216 CASK interacting protein 1 [Homo sapiens] 39 0.002
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 39 0.002
gi|194272172 double homeobox, 4 [Homo sapiens] 39 0.002
gi|194272217 double homeobox, 4-like [Homo sapiens] 39 0.002
gi|194272216 double homeobox, 4-like [Homo sapiens] 39 0.002
gi|194272215 double homeobox, 4-like [Homo sapiens] 39 0.002
gi|194272192 double homeobox, 4-like [Homo sapiens] 39 0.002
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ... 39 0.003
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 39 0.003
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.003
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 38 0.004
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 38 0.004
gi|7706501 WW domain binding protein 11 [Homo sapiens] 38 0.004
gi|33286436 gametogenetin [Homo sapiens] 38 0.004
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 37 0.008
>gi|239748921 PREDICTED: hypothetical protein XP_002346857 [Homo
sapiens]
Length = 186
Score = 402 bits (1032), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP 60
MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP
Sbjct: 1 MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP 60
Query: 61 PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP
Sbjct: 61 PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
Query: 121 LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI 180
LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI
Sbjct: 121 LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI 180
Query: 181 WFKDFC 186
WFKDFC
Sbjct: 181 WFKDFC 186
>gi|239742943 PREDICTED: hypothetical protein XP_002342700 [Homo
sapiens]
Length = 186
Score = 402 bits (1032), Expect = e-112
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP 60
MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP
Sbjct: 1 MEGDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP 60
Query: 61 PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP
Sbjct: 61 PRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
Query: 121 LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI 180
LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI
Sbjct: 121 LPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYRLLTMLIRKTFI 180
Query: 181 WFKDFC 186
WFKDFC
Sbjct: 181 WFKDFC 186
>gi|239754373 PREDICTED: hypothetical protein XP_002345967 [Homo
sapiens]
Length = 145
Score = 241 bits (614), Expect = 3e-64
Identities = 116/137 (84%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Query: 51 RGTSPGCSRPPRAADSPGALPLCGT-RVPADGRWGRSARVSETGWEPAPPPFPKRGSRHR 109
RG P D + G+ RVPADGRWGRSARVSETGWEPAPPPFPKRGSRHR
Sbjct: 9 RGAEPPMGPRTSTGDPSARVTKNGSQRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHR 68
Query: 110 NSQTPEPAGLPLPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYR 169
NSQTPEPAGLPLPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYR
Sbjct: 69 NSQTPEPAGLPLPLHPIRASAGNWEVCQTKLFRLLAIYVLGGGFVGRAPADLVLSCYGYR 128
Query: 170 LLTMLIRKTFIWFKDFC 186
LLTMLIRKTFIWFKDFC
Sbjct: 129 LLTMLIRKTFIWFKDFC 145
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 44.7 bits (104), Expect = 5e-05
Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 14 ASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAAR---------GTSPGCSRPPRA- 63
A+P RL +Q P L A GP P P PGP A + PG R A
Sbjct: 628 AAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTCAL 687
Query: 64 ADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPK---RGSRHRNSQTP 114
S G+LP R+P D + ET E APPP P+ RG+ R S P
Sbjct: 688 GGSLGSLPASPFRIPEDDEY-------ETTQECAPPPPPRPRARGASRRTSAGP 734
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 44.7 bits (104), Expect = 5e-05
Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 14 ASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAAR---------GTSPGCSRPPRA- 63
A+P RL +Q P L A GP P P PGP A + PG R A
Sbjct: 636 AAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTCAL 695
Query: 64 ADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPK---RGSRHRNSQTP 114
S G+LP R+P D + ET E APPP P+ RG+ R S P
Sbjct: 696 GGSLGSLPASPFRIPEDDEY-------ETTQECAPPPPPRPRARGASRRTSAGP 742
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 44.7 bits (104), Expect = 5e-05
Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 14 ASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAAR---------GTSPGCSRPPRA- 63
A+P RL +Q P L A GP P P PGP A + PG R A
Sbjct: 642 AAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTCAL 701
Query: 64 ADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPK---RGSRHRNSQTP 114
S G+LP R+P D + ET E APPP P+ RG+ R S P
Sbjct: 702 GGSLGSLPASPFRIPEDDEY-------ETTQECAPPPPPRPRARGASRRTSAGP 748
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 44.7 bits (104), Expect = 5e-05
Identities = 40/114 (35%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 14 ASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAAR---------GTSPGCSRPPRA- 63
A+P RL +Q P L A GP P P PGP A + PG R A
Sbjct: 634 AAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPGADMQRSYDSYYYPAAGPGPRRGTCAL 693
Query: 64 ADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPK---RGSRHRNSQTP 114
S G+LP R+P D + ET E APPP P+ RG+ R S P
Sbjct: 694 GGSLGSLPASPFRIPEDDEY-------ETTQECAPPPPPRPRARGASRRTSAGP 740
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 44.3 bits (103), Expect = 6e-05
Identities = 40/124 (32%), Positives = 46/124 (37%), Gaps = 15/124 (12%)
Query: 3 GDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPR 62
G P + PG + + P PG GP G P GPR G PPR
Sbjct: 621 GPGPIANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLL------GPPPPPR 674
Query: 63 AA----DSPG----ALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTP 114
D PG P+ G P G + R R G EP PPP P RG+R S
Sbjct: 675 GGDPFWDGPGDPMRGGPMRGGPGPGPGPYHR-GRGGRGGNEPPPPPPPFRGARGGRSGGG 733
Query: 115 EPAG 118
P G
Sbjct: 734 PPNG 737
Score = 31.2 bits (69), Expect = 0.54
Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPL 72
R PG G P GR G P P P P ARG G P G +
Sbjct: 693 RGGPGPG----PGPYHRGRGGRGG-NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG 747
Query: 73 CGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTP 114
G P +G G + +G P P GS HR + P
Sbjct: 748 GGGHRPHEGPGGGMG--NSSGHRPHEGPGGGMGSGHRPHEGP 787
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 44.3 bits (103), Expect = 6e-05
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 6 PAIRHYRRASPGEGRLVDQAPDLPGRAAHGPW-------GAPTPEPGPRAAARGTSPGCS 58
PA+R+++ P P GR GP G P G A TSP
Sbjct: 1080 PALRYFQ-LPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASP 1138
Query: 59 RPPRAADSPGA-----LPLCGTRVPADGRWGRSARVSETGWEPAPPPFPK-RGSRHRNSQ 112
+PP A +P +P + P+ GRS++ S T EP P P G +S
Sbjct: 1139 QPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSP 1198
Query: 113 TPEPAGLPLPLHP 125
+P PA P+P P
Sbjct: 1199 SPAPAMSPVPPSP 1211
Score = 32.3 bits (72), Expect = 0.24
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 9 RHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARG 52
RH P G D +PD PGR G G + PG A+ RG
Sbjct: 13 RHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRG 56
Score = 31.2 bits (69), Expect = 0.54
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 37 WGAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGRWGRSARVSETGWEP 96
WGA P+P R G A P A R+P G + + G EP
Sbjct: 1408 WGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAP-GVGPLLLQLGTEP 1466
Query: 97 APPPFPKRGSRHRNSQTPEPAGLPL 121
P P P R++ EP LPL
Sbjct: 1467 -PAPHPGVSKPWRSAAPEEPERLPL 1490
Score = 28.1 bits (61), Expect = 4.6
Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 40 PTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPP 99
P P P G SP + P A + TR G + AP
Sbjct: 1945 PKPPLPPLPTGTGVSPTAAAAPGATSPSASSSSTSTR----HLQGVEFEMRPPLLRRAPS 2000
Query: 100 PFPKRGSRHRNSQTPEPAGLPL----PLHP 125
P S H+ S P P+ LP+ PL+P
Sbjct: 2001 PSLLPASEHKVSPAPRPSSLPILPSGPLYP 2030
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 42.0 bits (97), Expect = 3e-04
Identities = 34/94 (36%), Positives = 35/94 (37%), Gaps = 16/94 (17%)
Query: 28 LPGRAAHGPW--GAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGRWGR 85
L G A GP G P PGP G PG +PP A G LP G R
Sbjct: 7 LEGGAGDGPLPPGGAGPGPGP-----GPGPGAGKPPSAPAGGGQLPAAGA--------AR 53
Query: 86 SARVSET-GWEPAPPPFPKRGSRHRNSQTPEPAG 118
S V G P P P P GS R EP G
Sbjct: 54 STAVPPVPGPGPGPGPGPGPGSTSRRLDPKEPLG 87
Score = 33.5 bits (75), Expect = 0.11
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 18 EGRLVDQA-PDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGT- 75
+ RL Q+ P G A A P+PGP A T P + PPRA + G+ GT
Sbjct: 3796 QARLQQQSQPTTRGSAPAASQPAGKPQPGPSTA---TGPQPAGPPRAEQTNGSK---GTA 3849
Query: 76 RVPADGRWGRSARVSETGWEPAPPPFP---KRGSRHRNSQTP-EPAGLP 120
+ P GR ++ +PAP P P K G+ R TP PAG P
Sbjct: 3850 KAPQQGRAPQA--------QPAPGPGPAGVKAGA--RPGGTPGAPAGQP 3888
Score = 29.6 bits (65), Expect = 1.6
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 12/97 (12%)
Query: 11 YRRASPGEGRLVDQAPDLPG-------RAAHGPW-GAPTPEPGPRAAARGTSPGCSRPP- 61
YR +P + P G AA P G P+ P AAR + P
Sbjct: 2259 YRYPAPSRFPIASSVPPAEGPVYLGKPAAAKAPGAGGPSRPEMPVGAAREEPLPTTTPAA 2318
Query: 62 --RAADSPGALPLCGTRVPADGR-WGRSARVSETGWE 95
AA +P PL G + PAD G S +S G+E
Sbjct: 2319 IKEAAGAPAPAPLAGQKPPADAAPGGGSGALSRPGFE 2355
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 40.8 bits (94), Expect = 7e-04
Identities = 41/127 (32%), Positives = 46/127 (36%), Gaps = 39/127 (30%)
Query: 3 GDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSP-GCSRPP 61
G PPA + SPG+G L DQ G WG P P GP+ A P G PP
Sbjct: 181 GPPPA-----QGSPGDGGLQDQV---------GAWGLPGP-TGPKGDAGSRGPMGMRGPP 225
Query: 62 RAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPL 121
PG + GR G E G P PP P P P G P
Sbjct: 226 GPQGPPG----------SPGRAGAVGTPGERG--PPGPPGP-----------PGPPGPPA 262
Query: 122 PLHPIRA 128
P+ P A
Sbjct: 263 PVGPPHA 269
>gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo
sapiens]
Length = 238
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 24/118 (20%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTP--------EPGPRAAARGTSPGCSRPPRAADS 66
S G GR+V A G W P P P PRAA G G S PP
Sbjct: 78 SLGAGRVVRLA---------GIWRDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGR 128
Query: 67 PGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLPLH 124
GA G ADG S VS + P P P + G R P P+ +P+ H
Sbjct: 129 AGAWRSPGEAGAADG----SPHVSTS---PTPAPGRRGGREARLRPMPTPSWIPVSSH 179
Score = 29.3 bits (64), Expect = 2.0
Identities = 29/109 (26%), Positives = 38/109 (34%), Gaps = 11/109 (10%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGT---SPGCSRPPRAADSPGALP 71
SPGE D +P + +PTP PG R P S P ++ A
Sbjct: 134 SPGEAGAADGSPHVST--------SPTPAPGRRGGREARLRPMPTPSWIPVSSHKKAARS 185
Query: 72 LCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
R P+ + G+ TG E F +G R P AG P
Sbjct: 186 EPAERRPSLLQGGQRGPAHSTGMETQKEAFDGQGGRSPLPLPPSTAGPP 234
>gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo
sapiens]
Length = 238
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 24/118 (20%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTP--------EPGPRAAARGTSPGCSRPPRAADS 66
S G GR+V A G W P P P PRAA G G S PP
Sbjct: 78 SLGAGRVVRLA---------GIWRDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGR 128
Query: 67 PGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLPLH 124
GA G ADG S VS + P P P + G R P P+ +P+ H
Sbjct: 129 AGAWRSPGEAGAADG----SPHVSTS---PTPAPGRRGGREARLRPMPTPSWIPVSSH 179
Score = 29.3 bits (64), Expect = 2.0
Identities = 29/109 (26%), Positives = 38/109 (34%), Gaps = 11/109 (10%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGT---SPGCSRPPRAADSPGALP 71
SPGE D +P + +PTP PG R P S P ++ A
Sbjct: 134 SPGEAGAADGSPHVST--------SPTPAPGRRGGREARLRPMPTPSWIPVSSHKKAARS 185
Query: 72 LCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
R P+ + G+ TG E F +G R P AG P
Sbjct: 186 EPAERRPSLLQGGQRGPAHSTGMETQKEAFDGQGGRSPLPLPPSTAGPP 234
>gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo
sapiens]
Length = 238
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/118 (32%), Positives = 44/118 (37%), Gaps = 24/118 (20%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTP--------EPGPRAAARGTSPGCSRPPRAADS 66
S G GR+V A G W P P P PRAA G G S PP
Sbjct: 78 SLGAGRVVRLA---------GIWRDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGR 128
Query: 67 PGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLPLH 124
GA G ADG S VS + P P P + G R P P+ +P+ H
Sbjct: 129 AGAWRSPGEAGAADG----SPHVSTS---PTPAPGRRGGREARLRPMPTPSWIPVSSH 179
Score = 29.3 bits (64), Expect = 2.0
Identities = 29/109 (26%), Positives = 38/109 (34%), Gaps = 11/109 (10%)
Query: 15 SPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGT---SPGCSRPPRAADSPGALP 71
SPGE D +P + +PTP PG R P S P ++ A
Sbjct: 134 SPGEAGAADGSPHVST--------SPTPAPGRRGGREARLRPMPTPSWIPVSSHKKAARS 185
Query: 72 LCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
R P+ + G+ TG E F +G R P AG P
Sbjct: 186 EPAERRPSLLQGGQRGPAHSTGMETQKEAFDGQGGRSPLPLPPSTAGPP 234
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 17/122 (13%)
Query: 25 APDLPGRAAHG-PWG-APTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGR 82
+P+ P AA PWG +P P R +AR TSP +P SP P PA
Sbjct: 244 SPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKP-----SPSESPEPWKPFPAVSP 298
Query: 83 WGR--SARVSETGWEPAPPPFPKRGSRHRNSQT-------PEPAGLPLPLHPI-RASAGN 132
R + VS W+P PP P+ + ++ + P P+ P P PI S G
Sbjct: 299 EPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGP 358
Query: 133 WE 134
W+
Sbjct: 359 WK 360
Score = 29.6 bits (65), Expect = 1.6
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 32 AAHGPWG----APTPEPGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGRWGRSA 87
A+ GPW AP+ PGP SPG +P + S + + W +S
Sbjct: 329 ASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSAS----WKSSSVSPSSW-KSP 383
Query: 88 RVSETGWEPAPPPF----PKRGSRHRNSQTPEPAGLPLPLHP----IRASAGNWEV 135
S W+ PP P H + P L P P IR+ AG+ E+
Sbjct: 384 PASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPEL 439
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/127 (29%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 3 GDPPAIRHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAAR---GTSPGCSR 59
G PP + P + V LP +A GP AP+P P AA GT P
Sbjct: 1265 GTPPPVSPKPPPPPTAPKPVKAVAGLPSGSA-GPSPAPSPARQPPAALAKPPGTPPSLGA 1323
Query: 60 PPRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGL 119
P SPGA L VPA +A + PAPP G R A L
Sbjct: 1324 SPAKPPSPGAPAL---HVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACL 1380
Query: 120 PLPLHPI 126
L +
Sbjct: 1381 AAALQAV 1387
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 39.3 bits (90), Expect = 0.002
Identities = 44/164 (26%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 13 RASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPG----PRAAARGTSPGCSRPPRAADSPG 68
+A+P EG V Q G A+ AP P G P+A PG SR R G
Sbjct: 283 QAAPAEG--VSQPAPARGDFAYA---APAPPDGALSHPQAPRWPPHPGKSREDRDPQRDG 337
Query: 69 ALPLCGTRVPADGR---------------------WGRSARVSETGWEP----APPPFPK 103
C P + WGR +V+ WEP APPP P
Sbjct: 338 LPGPCAVAQPGPAQAGPQGQGVLAPPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPPPQPA 397
Query: 104 RGSRHRNSQTPEPAGLPLPLHPIRASAGNWEV--CQTKLFRLLA 145
+++ + G+P P ++ A W C L LLA
Sbjct: 398 PPDASASARQGQMQGIPAPSQALQEPA-PWSALPCGLLLDELLA 440
>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
Length = 244
Score = 38.9 bits (89), Expect = 0.003
Identities = 35/101 (34%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 25 APDLPGRAAHGPWGAPTPEPGPR--AAARGTSPGCSRPPR----AADSPGALPLCGTRVP 78
+PD P + P G PT PR AA P RPP + LPLCGT +
Sbjct: 94 SPDRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGLG 153
Query: 79 ADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGL 119
+ R R AR S G AP FP+ + Q P GL
Sbjct: 154 LETR--RPAR-SCLGETAAPFRFPRCECKPPTPQRLHPCGL 191
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/132 (30%), Positives = 48/132 (36%), Gaps = 30/132 (22%)
Query: 12 RRASPGEGRLVDQAPDLPGRAAHGP------WGAPTPEPGPR-------AAARGTSPGCS 58
RR P R + P P R P WG+P P P P A A G +PG +
Sbjct: 83 RRPHPA-ARCLPLRPHRPTRRHRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVA 141
Query: 59 RPPRAADS--------PGALPLCGTRVPAD--------GRWGRSARVSETGWEPAPPPFP 102
R R S PG+ GT P D GR R+ R +ET A PP
Sbjct: 142 RAQRPGGSGGRSHPGGPGSPRGGGTVGPGDRGPAAADGGRPQRTVRAAETRGAAAAPPLT 201
Query: 103 KRGSRHRNSQTP 114
G + TP
Sbjct: 202 LEGPVQSHHGTP 213
Score = 30.8 bits (68), Expect = 0.70
Identities = 37/127 (29%), Positives = 47/127 (37%), Gaps = 12/127 (9%)
Query: 14 ASPGEGRLVDQAPDLPGRAAH-----GPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPG 68
A+PG R Q P G +H P G T PG R A R RAA++ G
Sbjct: 136 AAPGVARA--QRPGGSGGRSHPGGPGSPRGGGTVGPGDRGPAAADGGRPQRTVRAAETRG 193
Query: 69 --ALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLPLHPI 126
A P P G A T +P + G+ R + G PLP
Sbjct: 194 AAAAPPLTLEGPVQSHHGTPAL---TQGPQSPRDGAQLGACTRPVDVRDSGGRPLPPPDT 250
Query: 127 RASAGNW 133
ASAG++
Sbjct: 251 LASAGDF 257
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.5 bits (88), Expect = 0.003
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 16/106 (15%)
Query: 25 APDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPL--CGTRVPA--- 79
AP P P G+P P P+ A ++P + PP SP A PL PA
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGA---STPPAATPPSPKGSPAATPLPKGAPTTPAATL 1064
Query: 80 DGRWGRSARVSETGWEPAP---PPFPKRGSRHRNSQTPEPAGLPLP 122
G A S G P PP PK G TP P G P+P
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGG-----PATPSPKGAPMP 1105
Score = 37.4 bits (85), Expect = 0.008
Identities = 43/154 (27%), Positives = 59/154 (38%), Gaps = 35/154 (22%)
Query: 5 PPAIRHYRRASPGEGR----LVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRP 60
PP+++ P +G +V G A P GAPTP + +G SPG + P
Sbjct: 1271 PPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKG-SPG-TPP 1328
Query: 61 PRAADSPGAL--------PLCGTRVPA-----------DGRWGRSARVSETGWEPAPPPF 101
P+ A +P A+ P P+ +G +A S G PP
Sbjct: 1329 PKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Query: 102 PKRGSRHRNSQTPEPAGLP-----LPLHPIRASA 130
PKRG P P G P +PL P +A A
Sbjct: 1389 PKRG-----PAIPSPKGDPTSPAVIPLSPKKAPA 1417
Score = 33.1 bits (74), Expect = 0.14
Identities = 30/97 (30%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 30 GRAAHGPWGAPTP----EPGPRAAARGTSP-GCSRPPRAA-DSPGALPLCGTRVPADGRW 83
G A P GAPTP P P+ SP G PP SP P T P
Sbjct: 976 GPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSP-AATPFPKGAST 1034
Query: 84 GRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLP 120
+A PA P PK + P P G P
Sbjct: 1035 PPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 38.1 bits (87), Expect = 0.004
Identities = 41/133 (30%), Positives = 46/133 (34%), Gaps = 38/133 (28%)
Query: 24 QAPDLPGRAAHGP---------WGAPTPEPGPRAAAR-GTSPGCSRP------PRAADSP 67
Q P P GP W AP P P P A R G SP RP P A D P
Sbjct: 319 QQPTAPSSEWPGPQRSPGTGPRWTAPLPRPAPLPAKRPGDSPASKRPRPGGVSPEARDPP 378
Query: 68 -GALPLCGTRVPAD--------------GRW---GRSARVSETGWEPAPPPFPKRGSRHR 109
G PLC + + GR GR + G P P P P+ G R
Sbjct: 379 KGENPLCSSEAAGETGPTQVRGPDALGGGRLQGKGREGKAPGEGVSPRPAP-PRLGKPPR 437
Query: 110 NSQTPEPAGLPLP 122
+ P GL P
Sbjct: 438 SR---PPQGLAQP 447
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 38.1 bits (87), Expect = 0.004
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 13/113 (11%)
Query: 9 RHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPG 68
RH RA PG + P P R+ P AP P PG RA + + G P AA P
Sbjct: 21 RHSSRA-PGT-----RTPATPARSPRPPLCAPRPAPG-RAQSPVPAAGAVPSPPAAAHP- 72
Query: 69 ALPLCGTRVPADGRWGRSARVSETGWEPAPP--PFPKRG---SRHRNSQTPEP 116
A P PA GR GR+ E PP P RG R R + P P
Sbjct: 73 ARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPP 125
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/104 (34%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 24 QAPDLPGRAAHGPWGAP--TPEPGPRAAARGTSPGCS---RPPRAADSPGALPLCGTRVP 78
QAP +PG GP AP P P G PG RPP G LP P
Sbjct: 403 QAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGP 462
Query: 79 ADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLP 122
GR G P PPP RG R P P G+P P
Sbjct: 463 PPGRPPGPPPGPPPGLPPGPPP---RGPPPR-LPPPAPPGIPPP 502
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 38.1 bits (87), Expect = 0.004
Identities = 37/117 (31%), Positives = 43/117 (36%), Gaps = 15/117 (12%)
Query: 9 RHYRRASPGEGRLVDQAPDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPG 68
RH+R G G AP A GPWG+P P P +A PG RP A +P
Sbjct: 362 RHFRFNGAGGGI---GAPRRRAAALSGPWGSPPPPPEQIHSA----PGPRRPAPALLAP- 413
Query: 69 ALPLCGTRVPADGRWGRSARVSETGWEPAPPPFPKRGSRHRNSQTPEPAGLPLPLHP 125
P P +G R P PPP P Q P PLP+ P
Sbjct: 414 --PTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPP-----PTLQPPALQPTPLPVAP 463
Score = 28.5 bits (62), Expect = 3.5
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 53 TSPGCSRPPRAADSPGALPLCGTRV-PADGRWGRSARVSETGWEPAPPPFPKRGSRHRNS 111
T PG P SP LPL R P +A VS APPP P S
Sbjct: 56 TPPGLMVPREPQASPSTLPLTLERPSPVMPPPEEAAAVS------APPPAPAGTLLPGPS 109
Query: 112 QTPEPAGLPLP 122
+ +PAG P+P
Sbjct: 110 KWQKPAGTPVP 120
Score = 27.7 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 25 APDLPGRAAHGPWGAPTPEPGPRAAARGTSPGCSRPPRAADSPGALPL 72
AP LP A AP+P P P A PP +A +P A P+
Sbjct: 481 APALPPALAADQAPAPSPAPAPTVAE-------PSPPVSAPAPAAAPI 521
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 37.4 bits (85), Expect = 0.008
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 40 PTPEPGP----RAAARGTSPGCSRPPRAADSPGALPLCGTRVPAD--GRWGRSARVSETG 93
P PEP P AAA+ + P + PR+A +PGA PL P + G G +T
Sbjct: 86 PEPEPAPFGPPGAAAQPSKPTSTVLPRSASAPGAPPLVRVPRPVEPPGDLGLPTEPQDTP 145
Query: 94 WEPAPPPFPKRGSRHRNSQTP 114
PA P G R + P
Sbjct: 146 GGPASEPAQPPGERSADPPLP 166
Score = 33.9 bits (76), Expect = 0.083
Identities = 42/149 (28%), Positives = 50/149 (33%), Gaps = 38/149 (25%)
Query: 3 GDPPAIRHYRRASP-GEGRLVDQAPDLPGRAAHGPWGAPTPE------------------ 43
G PP +R R P G+ L + D PG A P P
Sbjct: 118 GAPPLVRVPRPVEPPGDLGLPTEPQDTPGGPASEPAQPPGERSADPPLPALELAQATERP 177
Query: 44 -----PGPRAAARGTSPGCSRPPRAADSPGALPLCGTRVPADGRWGRSARVSETGWEPAP 98
P PRA + SP CS PP A PGA A G + + PAP
Sbjct: 178 SADAAPPPRAPSEAASP-CSDPPDAEPGPGA---------AKGPPQQKPCMLPVRCVPAP 227
Query: 99 PPFPKR----GSRHRNSQTPEPAGLPLPL 123
R G R + S+ P P PL L
Sbjct: 228 ATLRLRAEEPGLRRQLSEEPSPRSSPLLL 256
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.141 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,832,473
Number of Sequences: 37866
Number of extensions: 745047
Number of successful extensions: 6223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 737
Number of HSP's that attempted gapping in prelim test: 4898
Number of HSP's gapped (non-prelim): 1871
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.