Search of human proteins with 239748807

Search of human proteins with 239748807

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748807 PREDICTED: hypothetical protein XP_002346806 [Homo
sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754273 PREDICTED: hypothetical protein XP_002345938 [Homo ...   232   4e-62
gi|239748807 PREDICTED: hypothetical protein XP_002346806 [Homo ...   232   4e-62
gi|239742846 PREDICTED: hypothetical protein XP_002342676 [Homo ...   232   4e-62
gi|239740902 PREDICTED: hypothetical protein XP_002344080 [Homo ...   232   4e-62
gi|239740832 PREDICTED: hypothetical protein XP_002344045 [Homo ...   232   4e-62
gi|239740782 PREDICTED: hypothetical protein [Homo sapiens]           232   4e-62
gi|239740729 PREDICTED: hypothetical protein [Homo sapiens]           232   4e-62
gi|239740679 PREDICTED: hypothetical protein [Homo sapiens]           232   4e-62
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]     38   0.002
gi|40807452 peroxisome proliferator-activated receptor gamma, co...    33   0.038
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 33   0.065
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ...    32   0.084
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    32   0.084
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                32   0.11 
gi|7662346 ADNP homeobox 2 [Homo sapiens]                              32   0.11 
gi|67782307 manganese superoxide dismutase isoform A precursor [...    32   0.14 
gi|67782305 manganese superoxide dismutase isoform A precursor [...    32   0.14 
gi|118402590 myosin XV [Homo sapiens]                                  32   0.14 
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ...    32   0.14 
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ...    32   0.14 
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ...    32   0.14 
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su...    31   0.19 
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     31   0.19 
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     31   0.19 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    31   0.19 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    31   0.19 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    31   0.19 
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi...    31   0.19 
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi...    31   0.19 
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     31   0.19 

>gi|239754273 PREDICTED: hypothetical protein XP_002345938 [Homo
           sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239748807 PREDICTED: hypothetical protein XP_002346806 [Homo
           sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239742846 PREDICTED: hypothetical protein XP_002342676 [Homo
           sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239740902 PREDICTED: hypothetical protein XP_002344080 [Homo
           sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239740832 PREDICTED: hypothetical protein XP_002344045 [Homo
           sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239740782 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239740729 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|239740679 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  232 bits (592), Expect = 4e-62
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60
           MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ
Sbjct: 1   MAIQGLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQ 60

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP
Sbjct: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107


>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
          Length = 1669

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 12/82 (14%)

Query: 33  VRVPADLLDPQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGV 92
           +R+  D  DP  P Q  +  + G+PG  G   GL  P P+  PG +    E  PP   GV
Sbjct: 537 LRLKGDKGDPGFPGQPGMTGRAGSPGRDG-HPGL--PGPKGSPGSVGLKGERGPP--GGV 591

Query: 93  LFPG-------PGPGWLGFSVP 107
            FPG       PGP   G + P
Sbjct: 592 GFPGSRGDTGPPGPPGYGPAGP 613


>gi|40807452 peroxisome proliferator-activated receptor gamma,
            coactivator-related 1 [Homo sapiens]
          Length = 1664

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 32   AVRVPADLLDPQVPPQSPLFLQRGAPGHQGCSHGL--WVPSPRAGPGHITKSPEAAPPRS 89
            A  VP     P  PP +P+     +P    C++G   W P P+  P   T  P   PP S
Sbjct: 952  AYAVPPTCSVPWAPPPAPV-----SPYSSTCTYGPLGWGPGPQHAPFWSTVPPPPLPPAS 1006

Query: 90   SGVLFPGP 97
             G   P P
Sbjct: 1007 IGRAVPQP 1014


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 32.7 bits (73), Expect = 0.065
 Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 36  PADLLDPQVPPQSPLFLQR-GAPGHQGCSHGLWVPSPRAG------PGHITKSPEAAPPR 88
           P   L P  PP +P FL+  G PG +G    L  P P  G      PG     P   PPR
Sbjct: 426 PPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPR 485

Query: 89  SSGVLFPGPGP 99
                 P P P
Sbjct: 486 GPPPRLPPPAP 496


>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
           sapiens]
          Length = 177

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 5   GLRKGCHCSHHTAQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQGCSH 64
           G   G H S   A  PGL++A ++   A R  + L     P    + +   +P       
Sbjct: 63  GAPSGAHSSCRRAVRPGLSVAGKA--SAPRPASHLYSKLRPRLVSVTVSTSSPS------ 114

Query: 65  GLWVPSPR--AGPGHITKSPEAAPPRSSGVLFPGPGP 99
             W PSP   +  G    +  +  P S G   PGPGP
Sbjct: 115 -AWKPSPANCSSSGKDEAAASSTTPPSMGPAAPGPGP 150


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 23  NLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRA--GPGHITK 80
           +LA   +      P + LDP +   +P +  RG P           P PRA   P     
Sbjct: 745 SLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPP----PPPRAPADPAASPD 800

Query: 81  SPEAAPPRSSGVLFPGPGPGWLGF 104
            P A     SG+  PGP PG  G+
Sbjct: 801 PPSAVASPGSGLSSPGPKPGDSGY 824


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 7/49 (14%)

Query: 55  GAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPG----PGP 99
           GAPG +G S    VP PR  PG +       PP   GV  PG    PGP
Sbjct: 246 GAPGDKGESGPPGVPGPRGEPGAVGPK---GPPGVDGVGVPGAAGLPGP 291



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 42  PQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGW 101
           P+ PP  P F  +   G  G  HG   P P AGP   ++  +A PP   G + P   PG 
Sbjct: 87  PRGPPGPPGFPGKPGMGKPGL-HGQ--PGP-AGPPGFSRMGKAGPPGLPGKVGPPGQPGL 142

Query: 102 LG 103
            G
Sbjct: 143 RG 144



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 55  GAPGHQGCSHGLWVPSPRAGPGHITKSPEAAP--PRSSGVLFPGPGPGWLG 103
           G PG QG S     P  R  PG I  +    P  P   G   P   PG LG
Sbjct: 287 GLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLG 337


>gi|7662346 ADNP homeobox 2 [Homo sapiens]
          Length = 1131

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 34/112 (30%), Positives = 43/112 (38%), Gaps = 17/112 (15%)

Query: 7   RKGCHCSHHTAQLPGLNLASESLQEAVRVPAD-----LLDPQVPPQ----SPLFLQRGAP 57
           R G     H A  P  +LA+ +   A   PA      L  PQ  P      P+ + +GAP
Sbjct: 257 RTGLLKQTHIAPKPAAHLAAPANGSAPSAPAQPPCFHLALPQNSPSPAAGQPVTVAQGAP 316

Query: 58  GHQGCSHGLWVPSPRAGPGHIT--KSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
           G       L    P AG  H+T   SP      S  +  P P P +L   VP
Sbjct: 317 G------SLTHSPPAAGQSHMTLVSSPLPVGQNSLTLQPPAPQPVFLSHGVP 362


>gi|67782307 manganese superoxide dismutase isoform A precursor
           [Homo sapiens]
          Length = 222

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 11  HCSHHTAQLPGLNLASESLQEAVR---VPADL-LDPQVP------PQSPLFLQRGAPGHQ 60
           H  HH A +  LN+  E  QEA+    V A + L P +           +F    +P   
Sbjct: 51  HSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGG 110

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFS 105
           G   G  + + +   G   K  E     S GV   G G GWLGF+
Sbjct: 111 GEPKGELLEAIKRDFGSFDKFKEKLTAASVGV--QGSGWGWLGFN 153


>gi|67782305 manganese superoxide dismutase isoform A precursor
           [Homo sapiens]
          Length = 222

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 11  HCSHHTAQLPGLNLASESLQEAVR---VPADL-LDPQVP------PQSPLFLQRGAPGHQ 60
           H  HH A +  LN+  E  QEA+    V A + L P +           +F    +P   
Sbjct: 51  HSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGG 110

Query: 61  GCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFS 105
           G   G  + + +   G   K  E     S GV   G G GWLGF+
Sbjct: 111 GEPKGELLEAIKRDFGSFDKFKEKLTAASVGV--QGSGWGWLGFN 153


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 23/88 (26%)

Query: 39  LLDPQVPPQSPLFLQRGAPGHQGCSHGLWVPS-----------PRAGPGHITKSPEAA-- 85
           LL P VPP+ P      AP       GL  P+           P A P H+  +P+A+  
Sbjct: 660 LLSPPVPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWW 719

Query: 86  ----PPRSSG------VLFPGPGPGWLG 103
               PP  S       + FPGP P + G
Sbjct: 720 AFVEPPAVSPEVPPDLLAFPGPRPSFRG 747


>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
            sapiens]
          Length = 1650

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 55   GAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
            G PG QG      +P P+  PG   +  E   P +SG + PG  PG  G + P
Sbjct: 1334 GPPGEQGEKGDRGLPGPQGSPG---QKGEMGIPGASGPIGPGGPPGLPGPAGP 1383



 Score = 31.2 bits (69), Expect = 0.19
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 29  LQEAVRVPADLLDPQVPPQ--SPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAP 86
           L+EA   P  L   +  P    P  L  G PG +G +  +  P  +  PG +    E  P
Sbjct: 285 LEEAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGP 344

Query: 87  PRSSGVLFPG----PGPGWLGFSVP 107
           P  +G+  PG    PGP      +P
Sbjct: 345 PGRAGL--PGSDGAPGPPGTSLMLP 367


>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
            sapiens]
          Length = 1629

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 55   GAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
            G PG QG      +P P+  PG   +  E   P +SG + PG  PG  G + P
Sbjct: 1313 GPPGEQGEKGDRGLPGPQGSPG---QKGEMGIPGASGPIGPGGPPGLPGPAGP 1362



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 49  PLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPG----PGPGWLGF 104
           P  L  G PG +G +  +  P  +  PG +    E  PP  +G+  PG    PGP     
Sbjct: 286 PGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGL--PGSDGAPGPPGTSL 343

Query: 105 SVP 107
            +P
Sbjct: 344 MLP 346


>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
            sapiens]
          Length = 1736

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 55   GAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPGPGWLGFSVP 107
            G PG QG      +P P+  PG   +  E   P +SG + PG  PG  G + P
Sbjct: 1420 GPPGEQGEKGDRGLPGPQGSPG---QKGEMGIPGASGPIGPGGPPGLPGPAGP 1469



 Score = 28.5 bits (62), Expect = 1.2
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 49  PLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPG----PGPGWLGF 104
           P  L  G PG +G +  +  P  +  PG +    E  PP  +G+  PG    PGP     
Sbjct: 393 PGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGL--PGSDGAPGPPGTSL 450

Query: 105 SVP 107
            +P
Sbjct: 451 MLP 453


>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
           substrate [Homo sapiens]
          Length = 777

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/86 (26%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 17  AQLPGLNLASESLQEAVRVPADLLDPQVPPQSPLFLQRGAPGHQGCSHGLWV--PSPRAG 74
           AQ+P   L    LQ        L  P  P   P              HG+++  P+P AG
Sbjct: 558 AQMPAFPLPYAQLQAMPAAGGVLYQPSGPASFPSTFSPAGSVEGSPMHGVYMSQPAPAAG 617

Query: 75  PGHITKSPEAAPPRSSGVLFPGPGPG 100
           P     S  A P   S  ++P    G
Sbjct: 618 PYPSMPSTAADPSMVSAYMYPAGATG 643


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 41  DPQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAP-PRSSGVLFPGPG- 98
           D  +PP  PL    G P       G  +P P   PG     P   P P S+G+  P P  
Sbjct: 639 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL 698

Query: 99  PGWLGFSVP 107
           PG  G   P
Sbjct: 699 PGEAGMPPP 707



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 44  VPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPG-PGWL 102
           + P  PL      P       G+ +PSP + PG     P    P S+ +  P P  PG  
Sbjct: 630 ISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSA 689

Query: 103 GFSVP 107
           G   P
Sbjct: 690 GIPPP 694


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 41  DPQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAP-PRSSGVLFPGPG- 98
           D  +PP  PL    G P       G  +P P   PG     P   P P S+G+  P P  
Sbjct: 648 DATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL 707

Query: 99  PGWLGFSVP 107
           PG  G   P
Sbjct: 708 PGEAGMPPP 716



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 44  VPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPEAAPPRSSGVLFPGPG-PGWL 102
           + P  PL      P       G+ +PSP + PG     P    P S+ +  P P  PG  
Sbjct: 639 ISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSA 698

Query: 103 GFSVP 107
           G   P
Sbjct: 699 GIPPP 703


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 18/67 (26%)

Query: 46  PQSPLFLQRGAPGHQGCSHGLWVPSPRA-GPG--------HITKSPEAAPPRSSGVLFPG 96
           P  PL   RGAPG         +P P A GPG        + T+ PE+A P + G L PG
Sbjct: 675 PAPPLAF-RGAPGAP-------LPWPPATGPGSADGLCTIYETEGPESATP-APGALDPG 725

Query: 97  PGPGWLG 103
           P PG  G
Sbjct: 726 PSPGTSG 732


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
          Length = 1124

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 18/67 (26%)

Query: 46   PQSPLFLQRGAPGHQGCSHGLWVPSPRA-GPG--------HITKSPEAAPPRSSGVLFPG 96
            P  PL   RGAPG         +P P A GPG        + T+ PE+A P + G L PG
Sbjct: 944  PAPPLAF-RGAPGAP-------LPWPPATGPGSADGLCTIYETEGPESATP-APGALDPG 994

Query: 97   PGPGWLG 103
            P PG  G
Sbjct: 995  PSPGTSG 1001


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 18/67 (26%)

Query: 46  PQSPLFLQRGAPGHQGCSHGLWVPSPRA-GPG--------HITKSPEAAPPRSSGVLFPG 96
           P  PL   RGAPG         +P P A GPG        + T+ PE+A P + G L PG
Sbjct: 636 PAPPLAF-RGAPGAP-------LPWPPATGPGSADGLCTIYETEGPESATP-APGALDPG 686

Query: 97  PGPGWLG 103
           P PG  G
Sbjct: 687 PSPGTSG 693


>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo
           sapiens]
          Length = 1082

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 19/86 (22%)

Query: 6   LRKGCHCSHHTAQLPGLNLASESLQE----AVRVPADLLDPQVPPQSPLFLQRGAPGHQG 61
           L  G    HH  Q PGL+ A  SL +    A   P D + P   PQ P     G      
Sbjct: 704 LSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPS--PQDPSLEASG------ 755

Query: 62  CSHGLWVPSPRAGPGHITKSPEAAPP 87
                  PSP+     I+++P+ + P
Sbjct: 756 -------PSPKPAGVDISEAPQTSSP 774


>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo
           sapiens]
          Length = 1082

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 19/86 (22%)

Query: 6   LRKGCHCSHHTAQLPGLNLASESLQE----AVRVPADLLDPQVPPQSPLFLQRGAPGHQG 61
           L  G    HH  Q PGL+ A  SL +    A   P D + P   PQ P     G      
Sbjct: 704 LSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPS--PQDPSLEASG------ 755

Query: 62  CSHGLWVPSPRAGPGHITKSPEAAPP 87
                  PSP+     I+++P+ + P
Sbjct: 756 -------PSPKPAGVDISEAPQTSSP 774


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 26  SESLQEAVRV--PADLLDPQVPPQSPLFLQRGAPGHQGCSHGLWVPSPRAGPGHITKSPE 83
           S S + A RV  P     P  PP++P    RGAP     +     P+P   P  +  +  
Sbjct: 90  SISYRNAARVQPPRRGATPPAPPRAP----RGAPAAAAAAAPPPTPAPPPPPAPVAAAAP 145

Query: 84  AAPPRSSGVLF---PGPGPGWLG 103
           A  PR++       P PGP   G
Sbjct: 146 ARAPRAAAAAATAPPSPGPAQPG 168


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.138    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,474,693
Number of Sequences: 37866
Number of extensions: 394376
Number of successful extensions: 2322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 1973
Number of HSP's gapped (non-prelim): 567
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.