Guide to the Human Genome
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Search of human proteins with 239748761

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748761 PREDICTED: hypothetical protein XP_002346789 [Homo
sapiens]
         (513 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748761 PREDICTED: hypothetical protein XP_002346789 [Homo ...  1019   0.0  
gi|239742806 PREDICTED: hypothetical protein XP_002342653 [Homo ...  1019   0.0  
gi|239754229 PREDICTED: hypothetical protein [Homo sapiens]          1016   0.0  
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            49   8e-06
gi|210031154 zinc finger protein 541 [Homo sapiens]                    46   7e-05
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          46   9e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  45   2e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    44   3e-04
gi|122692281 hypothetical protein LOC645369 [Homo sapiens]             42   0.002
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    41   0.002
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ...    41   0.003
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ...    41   0.003
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]            41   0.003
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             41   0.003
gi|89276766 trophinin isoform 5 [Homo sapiens]                         40   0.005
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        40   0.005
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    39   0.009
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         39   0.009
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]            39   0.011
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    39   0.011
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          39   0.015
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         39   0.015
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]                      38   0.019
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    38   0.019
gi|153792074 proline rich 12 [Homo sapiens]                            37   0.033
gi|27436925 synoviolin 1 isoform a [Homo sapiens]                      37   0.043
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]            37   0.043
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]            37   0.043
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]         37   0.043
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             37   0.043

>gi|239748761 PREDICTED: hypothetical protein XP_002346789 [Homo
           sapiens]
          Length = 513

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 513/513 (100%), Positives = 513/513 (100%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|239742806 PREDICTED: hypothetical protein XP_002342653 [Homo
           sapiens]
          Length = 513

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 513/513 (100%), Positives = 513/513 (100%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|239754229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 513

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 511/513 (99%), Positives = 511/513 (99%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSA FSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESR TPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 67/235 (28%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 39  LSSSLFSEDLFSAALSPSEG----PSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGA 94
           + S+ ++    S A +PS+     PS S AS S+ +  A  + S TS   S   SS SGA
Sbjct: 126 IPSAFWASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGA 185

Query: 95  GWGPSSAVLAPSPF--SSLGSW--RPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAP 150
                S   +PS F  S   SW   P  F W    P +       S ++ C   +A  A 
Sbjct: 186 STPSDSGWASPSVFWVSPSTSWASSPSDFGW-ASTPSD---SGWASSSASCISPSASGAS 241

Query: 151 ASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCT 210
            S     +  S S V+ S SR      SS +  AS   S    +S   W+ P    +  +
Sbjct: 242 TSSDSGWASPSASWVSTSTSR---ASTSSDSGWASSSASWDSITSDSGWVCPSASWASSS 298

Query: 211 GEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGV 265
               SA + S  +SP+  R+S     G +         P D   G +S H  SGV
Sbjct: 299 ASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPSD--SGWTS-HSASGV 350



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 102/407 (25%), Positives = 152/407 (37%), Gaps = 57/407 (14%)

Query: 50  SAALSPSEGPSVSS-ASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPF 108
           S++ S +  PS S  AS SA  +  P +DS  ++  + G S+ S +GW   SA  A  P 
Sbjct: 22  SSSASGASTPSNSGWASPSASGASIP-SDSGWASPSASGASTPSNSGWASFSASWASIPS 80

Query: 109 SSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCE--AAPPAPASPSPSASLKSMSLVA 166
            S   W   +  W      +    P  S AS  S    A+P    +  PSA   S S   
Sbjct: 81  DS--GWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASG 138

Query: 167 KSR---------SRLWLLDASSS---APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAV 214
            S          S  W   +S S   +PSAS    S  C+SS +  +  P  S     +V
Sbjct: 139 ASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGASTPSDSGWASPSV 198

Query: 215 SAVACST--GASPATWRSSVAPSD----------------GCSLSREEDQDDPGDVKKGK 256
             V+ ST   +SP+ +  +  PSD                G S S +     P       
Sbjct: 199 FWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVST 258

Query: 257 SSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRSTPPLL 316
           S+   ++    G A     W  +      +G     +  AS  +  A++P +S S+ P +
Sbjct: 259 STSRASTSSDSGWASSSASWDSI---TSDSGWVCPSASWASSSASWASAPSDSGSSSPSV 315

Query: 317 ARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDS-FGLVVAAGVAVVAALGTE 375
           +R                A   SV   AS   +GA    DS +    A+GV+  +  G  
Sbjct: 316 SR----------------ASTLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSGWA 359

Query: 376 PPKLSEAVVLLPV-LAGPGSATLVFSRVGAEDTDEMIWAMEASGGSS 421
            P  S A        A P ++    S  GA    +  WA  ++ G+S
Sbjct: 360 SPSASGASTSSDSGWASPSASWASPSASGASTPSDSGWASPSASGAS 406



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 15/209 (7%)

Query: 34  SVFGFLSSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSG 93
           S FG+ S+   S+  ++++ +    PS S AS S+ +  A  + S  S   S   S+ S 
Sbjct: 212 SDFGWASTP--SDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTSTSRA-STSSD 268

Query: 94  AGWGPSSAVLAPSPFSS-----LGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPP 148
           +GW  SSA        S       SW   +  W      +    P VS+AS  S      
Sbjct: 269 SGWASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWAS 328

Query: 149 APASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSR 208
             AS + + S    +  + S      +  +S +  ASP  S    SS   W SP    + 
Sbjct: 329 FSASGASAPSDSGWTSHSASG-----VSTTSDSGWASPSASGASTSSDSGWASPSASWAS 383

Query: 209 CTGEAVSAVACSTGASPATWRSSV--APS 235
            +    S  + S  ASP+   +S+  APS
Sbjct: 384 PSASGASTPSDSGWASPSASGASMPSAPS 412



 Score = 36.6 bits (83), Expect = 0.056
 Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 21/185 (11%)

Query: 85  SGGFSSCSGAGWGPSSAVLAPSPF-------SSLGSWRPCAFRWRLRVPRNLKLFPQVSQ 137
           + G S+ SG+GW  SSA  A +P        S+ G+  P    W                
Sbjct: 9   ASGVSTPSGSGWASSSASGASTPSNSGWASPSASGASIPSDSGWASPSASGASTPSNSGW 68

Query: 138 ASFCSCEAAPPAP---ASPSPS-ASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPC 193
           ASF +  A+ P+    ASPS S AS  S S  A   +    + + S   S S   +S+P 
Sbjct: 69  ASFSASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIP- 127

Query: 194 SSSGSWLSPRPCSSRC---TGEAVSAVACSTGASPATWRSSVA----PSDGCSLSREEDQ 246
             S  W SP    +     +G A  + + ++ +S + W S  A    PS  C+ S     
Sbjct: 128 --SAFWASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGA 185

Query: 247 DDPGD 251
             P D
Sbjct: 186 STPSD 190


>gi|210031154 zinc finger protein 541 [Homo sapiens]
          Length = 1365

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 54/204 (26%), Positives = 75/204 (36%), Gaps = 32/204 (15%)

Query: 54  SPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGS 113
           +PS GP+       AGAS + G ++      S G SSC+ A  GP +   AP+   +   
Sbjct: 287 TPSPGPA------PAGASDSEGRNTACPCPASSGSSSCTPA--GPHA---APAALDTELP 335

Query: 114 WRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLW 173
             PC       +P+        +  +  + E   P P  P P  +L    L A+S +  W
Sbjct: 336 EEPC-------LPQKEPATDVFTAPNSRAAENGAPDPPEPEPDTAL----LQARSTAECW 384

Query: 174 LLDASSSAPSASPVL-------SSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPA 226
                 S P+  P+        SS P S S  WL   P   +  G  V  V     A P+
Sbjct: 385 --PEGGSVPACLPLFRGQTVPASSQPSSHSFQWLRNLPGCPKSKGNNVFVVH-KPSAVPS 441

Query: 227 TWRSSVAPSDGCSLSREEDQDDPG 250
              S   P        EE    PG
Sbjct: 442 REGSESGPGPSSGSPSEESPPGPG 465


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 26/220 (11%)

Query: 17  LQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGA 76
           + TF LL A  A     +VF F SSSL S     +A    E PS SS S S+ A+P PG 
Sbjct: 467 IATFSLLPAGGAP----TVFSFGSSSLKS-----SATVTGEPPSYSSGSDSSKAAPGPGP 517

Query: 77  DSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVS 136
            + +       F   S A   P+ A    +P ++  S+    F+  L         P VS
Sbjct: 518 STFS-------FVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTP----VPSVS 566

Query: 137 QASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSS 196
             +     + PP+ ++   + S K  +    +      + +S SAP  SP  S+   ++S
Sbjct: 567 APNIAMKPSFPPSTSAVKVNLSEKFTAAATSTP-----VSSSQSAPPMSPFSSASKPAAS 621

Query: 197 GSWLSPRPCSSRCTGEAV-SAVACSTGASPATWRSSVAPS 235
           G    P P S+  +   + S+V  S     A   SS  PS
Sbjct: 622 GPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPS 661



 Score = 36.6 bits (83), Expect = 0.056
 Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 25/216 (11%)

Query: 23   LSALLATLLGESVFGFL-------SSSLFSEDLFSAALSPSEGPSVSSASF---SAGASP 72
            +SA  A+LL E     L       S S+  E + +     + G + SS S    SA A+P
Sbjct: 1510 VSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATP 1569

Query: 73   APGA--DSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLK 130
            A     D+ T A       S  G     ++A+ +  P +   S  P A      V     
Sbjct: 1570 ATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPG-- 1627

Query: 131  LFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSS 190
              P    A+F +  +     A P  ++S  + + +  +         +++APSA+PV   
Sbjct: 1628 --PSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNN---------TATAPSATPVFGQ 1676

Query: 191  VPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPA 226
            V  S++ S    +  S+  T  A   V+ S  +SPA
Sbjct: 1677 VAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPA 1712



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 98/413 (23%), Positives = 151/413 (36%), Gaps = 88/413 (21%)

Query: 36   FGFLSSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPG----ADSTTSAGVSGGFSSC 91
            FG ++ +  S    +   +PS   S    +FS+G    P      +S+  +G++   ++ 
Sbjct: 1225 FGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTT 1284

Query: 92   SGAGWGPSSAVLAPS--PFSSLGSWRPCAFRWRLRVPRNL---KLFPQ----VSQASFCS 142
             G     SS  +APS    S+  S        +L  P +     LFP      +  SF  
Sbjct: 1285 PGEPAASSSRPVAPSGTALSTTSS--------KLETPPSKLGELLFPSSLAGETLGSFSG 1336

Query: 143  CEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPS-----ASPVLSSVPCSSSG 197
                  A  S  P+    S SL +   ++      +S  PS     A PVL        G
Sbjct: 1337 LRVG-QADDSTKPTNKASSTSLTSTQPTK------TSGVPSGFNFTAPPVL--------G 1381

Query: 198  SWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKS 257
                P P +S  T  +V+  A ++ +S A + S    S G S          G +  G +
Sbjct: 1382 KHTEP-PVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSS----------GVISFGGT 1430

Query: 258  SLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRSTPPL-L 316
            SL      F   +   N  +P   PP       L +   S  ++   S L S +TP L +
Sbjct: 1431 SLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPT---SFPTLSFGSLLSSATTPSLPM 1487

Query: 317  ARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGLVVAAGVAVV------A 370
            + GR                  S  EA S  L    G  +     V+A  A +      A
Sbjct: 1488 SAGR------------------STEEATSSALPEKPGDSE-----VSASAASLLEEQQSA 1524

Query: 371  ALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGSSSV 423
             L   PP+ S++V   PVLA P  +    S   A  T  +  + EA+  ++ V
Sbjct: 1525 QLPQAPPQTSDSVKKEPVLAQPAVSN---SGTAASSTSLVALSAEATPATTGV 1574



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 34   SVFGFLSSSLFSEDLFSAALSPSEGPSV----------SSASFSAGASPAPGADSTTSAG 83
            SVFG  SS+  S        SP+ G  +           S  F  G S   G  + T+  
Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTA 1829

Query: 84   VSGGFSSCSGAGWGPSS 100
             + GFS C  +G+G S+
Sbjct: 1830 ATSGFSFCQASGFGSSN 1846



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 43/143 (30%), Positives = 56/143 (39%), Gaps = 13/143 (9%)

Query: 97  GPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPAS---P 153
           G  S +  P   S  G  +P       + P +    P  SQA      +A  APAS    
Sbjct: 409 GVKSLIKTPERLSLEGERQP-------KSPGSTPTTPTSSQAPQKLDASAAAAPASLPPS 461

Query: 154 SPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLS-PRPCSSRCTGE 212
           SP+A + + SL+    +       SSS  S++ V    P  SSGS  S   P     T  
Sbjct: 462 SPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFS 521

Query: 213 AVSAVACSTGASPATWRSSVAPS 235
            V     S   +PA   S VAPS
Sbjct: 522 FVPPSKASLAPTPAA--SPVAPS 542


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 69/236 (29%), Positives = 100/236 (42%), Gaps = 38/236 (16%)

Query: 45   SEDLFSAALSPSEGPSVSSASFSAGASPA-PGADSTTSAGVSGGFSSCSGAGWGPSSAVL 103
            S    S+++  S+G S SS S ++  S   PG+   T  G+S G SS      G  S+++
Sbjct: 1123 SSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLM 1182

Query: 104  APS---PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLK 160
             PS   P  S    RP     +L  P                     P P +P PS+  K
Sbjct: 1183 NPSLSKPNISPSHSRPPGGSDKLASPMK-------------------PVPGTP-PSSKAK 1222

Query: 161  SMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPR--PCSSRCTGEAVSAVA 218
            S        S +      S   S+S + SS    SSGS LS +  P S+ CT  A S+  
Sbjct: 1223 SPISSGSGGSHM------SGTSSSSGMKSSSGLGSSGS-LSQKTPPSSNSCT--ASSSSF 1273

Query: 219  CSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLN 274
             S+G+S ++ ++    S G S SR +       + K K  + +TSG  PG   PL+
Sbjct: 1274 SSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGV-VTSG--PGGEDPLD 1326


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 75/289 (25%), Positives = 105/289 (36%), Gaps = 48/289 (16%)

Query: 55  PSEGP--SVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPS--PFSS 110
           P+EGP  SVSSAS  +   P+P A    SAG  GG          P+S  L+ S  P SS
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG--GGLQR-------PASRSLSSSATPLSS 251

Query: 111 LGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSA--SLKSMSLVAKS 168
                                 P  S  S      AP  P+ P P    +L+   +    
Sbjct: 252 ----------------------PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 289

Query: 169 RSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATW 228
           +     L   SS+P A+P  S+   S +   L   P SS  T +  + +  +  +  A  
Sbjct: 290 KDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPP 349

Query: 229 RSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGL 288
                PS   +               G  +L  T    P  + PL+P L  PPP     L
Sbjct: 350 SLQTLPSPPAT------PPSQATTSLGSPTLQATHSFLP--SPPLSP-LATPPPQAPPAL 400

Query: 289 NLLVSVVASIFSMLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGP 337
            L    + +  S  A+ PL   +TP   A   L + L +  F   P+ P
Sbjct: 401 AL--PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 447



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 81/315 (25%), Positives = 110/315 (34%), Gaps = 64/315 (20%)

Query: 37  GFLSSSLFSEDLFSAALSPSEGPSVSSASFSAG-----ASPAPGADSTTSAGVSGGFSSC 91
           G LSSS  +    SAAL     P++ +   S+      A+P P A  + SA         
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA--------- 347

Query: 92  SGAGWGPSSAVLAPSP--------FSSLGSWRPCAFRWRLRVPRNLKLF---PQVSQASF 140
                 P S    PSP         +SLGS    A    L  P    L    PQ   A  
Sbjct: 348 ------PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 401

Query: 141 CSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVL------SSVPCS 194
                APP+P +  P + L + S  A +   + LL A  S P + PV       +S P S
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 461

Query: 195 SSGSWLSPRPCSSRCTGEAV-----SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDP 249
            S +  S  P S       V     ++   S  A+P         +    L++   Q  P
Sbjct: 462 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP 521

Query: 250 GDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLES 309
                   +L      FPG A P +P   LP  P                  LA  P ++
Sbjct: 522 ALATPPLQALPSPPASFPGQA-PFSPSASLPMSP------------------LATPPPQA 562

Query: 310 RSTPPLLARGRLLIP 324
              PP+LA   L +P
Sbjct: 563 ---PPVLAAPLLQVP 574



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 70  ASPAPGA-DSTTSAGVSGGFSSCSGAGWGPSS 100
           A+PAPGA D   S G SGG  + +GAG G SS
Sbjct: 715 ATPAPGALDPGPSPGTSGG-KAAAGAGAGASS 745


>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
          Length = 621

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 56/222 (25%), Positives = 87/222 (39%), Gaps = 9/222 (4%)

Query: 42  SLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
           SL ++DL +AA + +   + SS+S  A A P     +   + V          G G S  
Sbjct: 212 SLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGD 271

Query: 102 VLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKS 161
               +   + GSW P         PR     P ++ +  C  E  PP+ A    S   + 
Sbjct: 272 AFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPRE--PPSLAEAVYSV-YRE 328

Query: 162 MSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACST 221
            S VA SR       A+++A +AS   S  PCS   SW   +  +S     ++SA A   
Sbjct: 329 RSGVAGSRRAA----AATAAAAASSCSSPAPCSPPESW-GRQSTASSFVDSSLSAFAL-L 382

Query: 222 GASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITS 263
                  R   A    CS  R   +    ++ +G+  L +T+
Sbjct: 383 PLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTN 424


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 63/228 (27%), Positives = 89/228 (39%), Gaps = 47/228 (20%)

Query: 16  TLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSP-SEGPSVSSASFSAGASPAP 74
           T Q+ FLLS+     L        S +     L+ AA  P   GP  SS+S S+ +SP+P
Sbjct: 10  TRQSAFLLSSPPLAALH-------SMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSP 62

Query: 75  GADSTTSAGV----SGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLK 130
              +    G+    +GG SS               SP   L +  P      L  P    
Sbjct: 63  PLGTHNPGGLKPPATGGLSSLG-------------SPPQQLSAATPHGINDILSRPS--- 106

Query: 131 LFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP--VL 188
             P  S A+  S        ASPS S+S  S S  A S S      A+++A ++SP  +L
Sbjct: 107 -MPVASGAALPS--------ASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLL 157

Query: 189 SSVPCSSS--------GSWLSPRPCSSRCTGEAVSAVACSTGASPATW 228
           + +P  SS        G + SP   +    G     +A   G +P  W
Sbjct: 158 AGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFW 205


>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
           sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
           sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 15/140 (10%)

Query: 59   PSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCA 118
            P ++S S    ASP     ++ S   S   S+ + A    S+   AP+P   L S     
Sbjct: 1792 PVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILAS----- 1846

Query: 119  FRWRLRVPRNLKLFPQVS----QASFCSCEAAPPAPASPSPSASLKSMSLVAKS--RSRL 172
                +  P ++ +    S     ++  S  A  PAPA+ SP+A + +   +  S   + +
Sbjct: 1847 ----VSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASV 1902

Query: 173  WLLDASSSAPSASPVLSSVP 192
             L  AS+SAP+ +P   S P
Sbjct: 1903 PLAPASASAPAPAPTPVSAP 1922



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 37/183 (20%)

Query: 57   EGPSVSSASFSAGASPAPGAD--STTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSW 114
            +   +  A  SA   P   A    +TSA V    S+       P  A L P P S+    
Sbjct: 1733 QATGIQQAQSSASVPPLASAPLPPSTSASVPASTSA-------PLPATLTPVPASTSAP- 1784

Query: 115  RPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASP----SPSASLKSMSLVAKSRS 170
                      VP +  L P ++  S        P PASP    S SAS+ +    + S +
Sbjct: 1785 ----------VPAST-LAPVLASTS-------APVPASPLAPVSASASVSASVPASTSAA 1826

Query: 171  RLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRS 230
             +    A +SAP+ +P+L+SV   +S + L     +S       SA+A ++  +PA   S
Sbjct: 1827 AITSSSAPASAPAPTPILASVSTPASVTIL-----ASASIPILASALASTSAPTPAPAAS 1881

Query: 231  SVA 233
            S A
Sbjct: 1882 SPA 1884


>gi|89276766 trophinin isoform 5 [Homo sapiens]
          Length = 1431

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 49  FSAALSPS-EGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSP 107
           FS  +S S  GP  +SA+FS GAS   G   +T+AG SG  S+ +  G  P+++ +  S 
Sbjct: 823 FSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSA 882

Query: 108 FSS 110
            S+
Sbjct: 883 LST 885



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 48/181 (26%), Positives = 70/181 (38%), Gaps = 16/181 (8%)

Query: 62  SSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV-LAPSPFSSLGSWRPCAFR 120
           ++ +FS GAS   G     S   +G  SS  G   GP     +APS  +S  +    +F 
Sbjct: 719 TNVNFSRGASTRAGFSDGASISFNGAPSSSGGFSGGPGITFGVAPSTSASFSNTASISFG 778

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
             L    +       S A+  S   A     S S  AS+    +   S S    + +S S
Sbjct: 779 GTLSTSSSF------SSAASISFGCAHSTSTSFSSEASISFGGMPCTSASFSGGVSSSFS 832

Query: 181 AP-SASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPAT---WRSSVAPSD 236
            P S S   S    S  G  LS     S      V + + S G++P T   + S+++ S 
Sbjct: 833 GPLSTSATFSGGASSGFGGTLSTTAGFS-----GVLSTSTSFGSAPTTSTVFSSALSTST 887

Query: 237 G 237
           G
Sbjct: 888 G 888



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)

Query: 55   PSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSW 114
            PS G    S   ++G S  P    +T AG  GG ++ +G G GPS++    S  +SLG+ 
Sbjct: 1371 PSTGVGFCSGPSTSGFSGGP----STGAGFGGGPNTGAGFGGGPSTSAGFGSGAASLGA- 1425

Query: 115  RPCAFRW 121
              C F +
Sbjct: 1426 --CGFSY 1430



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 42  SLFSEDLFSAALSPSEGPSVS-SASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSS 100
           +L +   FS+A S S G + S S SFS+ AS + G    TSA  SGG SS S +G   +S
Sbjct: 780 TLSTSSSFSSAASISFGCAHSTSTSFSSEASISFGGMPCTSASFSGGVSS-SFSGPLSTS 838

Query: 101 AVLAPSPFSSLG 112
           A  +    S  G
Sbjct: 839 ATFSGGASSGFG 850



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 9/85 (10%)

Query: 16  TLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEG-PSVSSASFSAGASPAP 74
           TL T    S +L+T    + FG   S+  +  +FS+ALS S G   + S S   G SP+ 
Sbjct: 852 TLSTTAGFSGVLST---STSFG---SAPTTSTVFSSALSTSTGFGGILSTSVCFGGSPSS 905

Query: 75  GAD--STTSAGVSGGFSSCSGAGWG 97
                 T S  +  G S C+  G+G
Sbjct: 906 SGSFGGTLSTSICFGGSPCTSTGFG 930



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 49   FSAALSPS---EGPSVSSASFSAG--ASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV- 102
            F  A+S S    G   +SA FS     +P  G   +TSAG  G  S+ +  G  PS+++ 
Sbjct: 1069 FGCAVSTSASFSGAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIG 1128

Query: 103  --LAPSPFSSLG 112
               APS   S G
Sbjct: 1129 FGAAPSTSVSFG 1140



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 25/78 (32%)

Query: 49   FSAALSPS--EGPSVS---------------------SASFSAGASPAPGADS--TTSAG 83
            FS A SPS  +GPS S                     SA F  G   + G     +TS+G
Sbjct: 1179 FSGATSPSFCDGPSTSTGFSFGNGLSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSSG 1238

Query: 84   VSGGFSSCSGAGWGPSSA 101
              GG  + +G G GP ++
Sbjct: 1239 FDGGLGTSAGFGGGPGTS 1256



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 49   FSAALSPS---EGPSVSSASFSAG--ASPAPGADSTTSAGVSGGFSSCSGAGWG 97
            FS  LS S   +G   +SA F  G   S   G    TSAG SGG  + +G G G
Sbjct: 1229 FSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGG 1282



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 49   FSAALSPSEGPS---VSSASFSAGASPAPGADST--TSAGVSGGFSSCSGAGWGPSSA 101
            FS  L  S G     V+S  F  G        ST  TSAG SGG S+  G G  P+++
Sbjct: 1269 FSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNAS 1326


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 73/282 (25%), Positives = 97/282 (34%), Gaps = 40/282 (14%)

Query: 42   SLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
            S FS+   S  L     P   S S S+GA     A +T+SAG   G  S    G  P S 
Sbjct: 2453 SAFSDQ--SRCLIAQTTPVAGSQSLSSGAV----ATTTSSAGDHNGMLSVPAPGV-PHSD 2505

Query: 102  VLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKS 161
            V  P   +S G+ +P A            L P   + S  S  ++  + +S S S+S  S
Sbjct: 2506 VGEPP--ASTGAQQPSALA---------ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554

Query: 162  MSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEA-------V 214
             S  + S S     + SS        L  VP        SP P       E         
Sbjct: 2555 SSGSSSSDS-----EGSSLPVQPEVALKRVP--------SPTPAPKEAVREGRPPEPTPA 2601

Query: 215  SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLN 274
                 S+ +S ++  SS + S   S S               SS    S   PG      
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK 2661

Query: 275  PWLPLPPPPGRNGLNLLVSVVASI--FSMLANSPLESRSTPP 314
            P  P  PPPG          + S+     L+ SP+E R   P
Sbjct: 2662 PASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 80/299 (26%), Positives = 108/299 (36%), Gaps = 60/299 (20%)

Query: 55  PSEGP--SVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPS--PFSS 110
           P+EGP  SVSSAS  +   P+P A    SAG  GG          P+S  L+ S  P SS
Sbjct: 192 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG--GGLQR-------PASRSLSSSATPLSS 242

Query: 111 LGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSA--SLKSMSLVAKS 168
                                 P  S  S      AP  P+ P P    +L+   +    
Sbjct: 243 ----------------------PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 280

Query: 169 RSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATW 228
           +     L   SS+P A+P  S+ P  S+   L   P          S    S G+     
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSP---PATPPSQATTSLGSPTLQA 337

Query: 229 RSSVAPSDGCS-LSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPW-LPLPPPPGRN 286
             S  PS   S L+    Q  P       +   + +   P  + PL+P   P P  P   
Sbjct: 338 THSFLPSPPLSPLATPPPQAPP-----ALALPPLQAPPSPPASPPLSPLATPSPQAPNAL 392

Query: 287 GLNLLVS--------VVASIFSMLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGP 337
            ++LL +         V + FS  A+ P+   +TPP  A   L  P   PL   VP  P
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP---PL--QVPPSP 446



 Score = 36.2 bits (82), Expect = 0.073
 Identities = 76/299 (25%), Positives = 106/299 (35%), Gaps = 62/299 (20%)

Query: 37  GFLSSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGW 96
           G LSSS  +    SA  SPS  PS+ +        P+P A   + A  S G  +      
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTL-------PSPPATPPSQATTSLGSPTLQA--- 337

Query: 97  GPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPS 156
             + + L   P S L +  P A       P  L L P            APP+P +  P 
Sbjct: 338 --THSFLPSPPLSPLATPPPQA-------PPALALPPL----------QAPPSPPASPPL 378

Query: 157 ASLKSMSLVAKSRSRLWLLDASSSAPSASPVL------SSVPCSSSGSWLSPRPCSSRCT 210
           + L + S  A +   + LL A  S P + PV       +S P S S +  S  P S    
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438

Query: 211 GEAV-----SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGV 265
              V     ++   S  A+P         +    L++   Q  P        +L      
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498

Query: 266 FPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRSTPPLLARGRLLIP 324
           FPG A P +P   LP  P                  LA  P ++   PP+LA   L +P
Sbjct: 499 FPGQA-PFSPSASLPMSP------------------LATPPPQA---PPVLAAPLLQVP 535



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 41/151 (27%), Positives = 51/151 (33%), Gaps = 24/151 (15%)

Query: 247 DDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPP---------------GRNGLNLL 291
           D+  D  K  ++    +   PGL  P  P  P PPPP               GR  L   
Sbjct: 2   DNKRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAER 61

Query: 292 VSVV--ASIFSMLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLA 349
              +  A+I      +     S PP   RG    P       +   GP S    ASG   
Sbjct: 62  AGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPA-----KNTSPGPVSSPGRASG--T 114

Query: 350 GAGGSLDSFGLVVAAGVAVVAALGTEPPKLS 380
              G L   GL ++A   V     TE PK S
Sbjct: 115 TRPGPLGQKGLRISAEETVARGKATEAPKRS 145



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 70  ASPAPGA-DSTTSAGVSGGFSSCSGAGWGPSS 100
           A+PAPGA D   S G SGG  + +GAG G SS
Sbjct: 676 ATPAPGALDPGPSPGTSGG-KAAAGAGAGASS 706


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 50/164 (30%), Positives = 64/164 (39%), Gaps = 21/164 (12%)

Query: 139  SFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGS 198
            S  S  AA PA +S S S+S  S S  + S S      +SSS+ S+S   SS   SSS S
Sbjct: 2603 SAASSRAASPASSSSSSSSSSSSSSSSSSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSS 2660

Query: 199  WLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSS 258
              S    SS  T +  S+ +    A+P       AP+ G S              K + S
Sbjct: 2661 SSSSSSSSSSSTTDEDSSCSSDDEAAP-------APTAGPSAQAALPTKATKQAGKARPS 2713

Query: 259  LHITSGVFPG---LAVPLNPWLPLPP---------PPGRNGLNL 290
             H      P     A P  P  PL P         P  R G++L
Sbjct: 2714 AHSPGKKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPKKREGVHL 2757



 Score = 35.8 bits (81), Expect = 0.096
 Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 31/169 (18%)

Query: 56   SEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWR 115
            SE  S SS+  S+ +S +  + S T     G  +   G G G  +   A S  +S     
Sbjct: 2557 SESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAAS----- 2611

Query: 116  PCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLL 175
                             P  S +S  S  ++  + +S S S+S  S S  + S S     
Sbjct: 2612 -----------------PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----- 2649

Query: 176  DASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGAS 224
              SSS+ S+S   SS   SSS S  S     S C+ +  +A A + G S
Sbjct: 2650 --SSSSSSSSSSSSSSSSSSSSS--STTDEDSSCSSDDEAAPAPTAGPS 2694



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 21/122 (17%)

Query: 40   SSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPS 99
            SSS  S    S++ S S   S SS+S S+ +S +  + S++S+  +   SSCS       
Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAP 2687

Query: 100  SAVLAPSPFSSL--------GSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPA 151
            +    PS  ++L        G  RP A     + P      PQ         +A PP P 
Sbjct: 2688 APTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPA-----PQP--------QAPPPQPT 2734

Query: 152  SP 153
             P
Sbjct: 2735 QP 2736



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 41/142 (28%), Positives = 49/142 (34%), Gaps = 17/142 (11%)

Query: 142  SCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLS 201
            S  A  P    P PS+  K+   V K R    L         A P       S    W  
Sbjct: 1942 SLAAPTPGARGPDPSSPDKAKLAVEKGRKARKLRGPKEPGFEAGP-----EASDDDLWTR 1996

Query: 202  PRPCSSRC-TGEAVSAVACSTGASPATWRSSVAPSDGCS----LSREEDQDDPGDVKKGK 256
             R  S R    +A +A       +PAT  S  A     S      R +D+ DP   KKGK
Sbjct: 1997 RR--SERIFLHDASAAAPAPVSTAPATKTSRCAKGGPLSPRKDAGRAKDRKDPRKKKKGK 2054

Query: 257  SSLHITSGVFPGLAVPLNPWLP 278
                  +G   GL  P  P LP
Sbjct: 2055 E-----AGPGAGLPPPRAPALP 2071



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 39/161 (24%), Positives = 56/161 (34%), Gaps = 11/161 (6%)

Query: 37   GFLSSSLFSEDLFSAALSPSEGPSVS-----------SASFSAGASPAPGADSTTSAGVS 85
            G  SSS  S    S      EG               SA+ S  ASPA  + S++S+  S
Sbjct: 2566 GSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSS 2625

Query: 86   GGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEA 145
               SS S +    SS+  + S  SS  S    +         +         +     EA
Sbjct: 2626 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEA 2685

Query: 146  APPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
            AP   A PS  A+L + +     ++R          P+  P
Sbjct: 2686 APAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQP 2726



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 57   EGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV----LAPSPFSSLG 112
            EG    +A      + A G     SA   G  ++    G  P+  V    LA  P S+ G
Sbjct: 2313 EGKDGGTAGSEEPGAKARGRGRKPSAKAKGDRAATLEEG-NPTDEVPSTPLALEPSSTPG 2371

Query: 113  SWR--PCAFRWRLRVPRNLKLFPQVSQA--SFCSCEAAPPAPASPSPSASLKSMSLVAKS 168
            S +  P     R + P+     PQ S A  +F SC A  P    P+P+ SL    L+   
Sbjct: 2372 SKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPLITMP 2431

Query: 169  RSR 171
             +R
Sbjct: 2432 ATR 2434


>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 48/197 (24%), Positives = 64/197 (32%), Gaps = 66/197 (33%)

Query: 119 FRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDAS 178
           F     +P+N+ ++   S+            PA PS  A+  S +   ++ SR      S
Sbjct: 24  FMCMFSLPQNMAIWGSASR------------PALPSVGAAPTSSARAVQAASR------S 65

Query: 179 SSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVS------AVACSTGASP------- 225
           S+ P +   L   P +    W  PRPCS+R    AVS      + ACS    P       
Sbjct: 66  SAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPE 125

Query: 226 -------------------ATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVF 266
                                 R   AP   C+ SR E    P                 
Sbjct: 126 RGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPA---------------- 169

Query: 267 PGLAVPLNPWLPLPPPP 283
           P  A PL P  P  PPP
Sbjct: 170 PTGAAPLAPPAPHAPPP 186


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 36/166 (21%)

Query: 99  SSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCS----------CEAAPP 148
           S+ V+ PS  +   +WRP A    +R P      P  + A+ C           C A+PP
Sbjct: 81  SAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP--PAAAPAAVCPAAADPSAASLCAASPP 138

Query: 149 A------------PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSS 196
           A            PA+  P+A+L ++   A         D S+++  A+  L++VP ++S
Sbjct: 139 AAVPAAVPAAVRPPAAGPPAAALAAVYPAA--------ADPSAASLCAASPLAAVPAAAS 190

Query: 197 GSWLSPRPCSSRCTGEA-VSAVACSTGASPATWRSSVAPSDGCSLS 241
            + ++P   ++ C G A  SA +    + PA   ++ +P+    L+
Sbjct: 191 PAAVAP---AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLA 233


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 47/174 (27%), Positives = 63/174 (36%), Gaps = 31/174 (17%)

Query: 72  PAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKL 131
           P P + S  +AG +G   S +G             P S  G+  P   R      R   L
Sbjct: 29  PPPPSPSAAAAGAAGARGSETG------------DPGSPRGAEEPGKKRHERLFHRQDAL 76

Query: 132 FPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLD---------ASSSAP 182
           +   S A     E  PPA  SP+P++  + +S     R  LW +          +    P
Sbjct: 77  WISTSSAGTGGAE--PPA-LSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKP 133

Query: 183 SASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATW--RSSVAP 234
             +P  S  P  SS SW  P P      G A   +  S+   P T   R  VAP
Sbjct: 134 GGAPTSSRRPLLSSPSWGGPEP-----EGRAGGGIPGSSSPHPGTGSRRLKVAP 182



 Score = 30.4 bits (67), Expect = 4.0
 Identities = 63/231 (27%), Positives = 84/231 (36%), Gaps = 50/231 (21%)

Query: 56  SEG-PSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV---LAPS----- 106
           SEG P V  +  SAG   +  A +T +A   GG ++ +  G G  +     L+P      
Sbjct: 215 SEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSK 274

Query: 107 --PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQA-SFCSCEAAPPAPASP----SPSASL 159
               S L    P         P  L L P  S A +  +  A PP PA P     P+  L
Sbjct: 275 TLDNSDLHPGPPAG------SPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGL 328

Query: 160 KSMSLVAKSRSR--------LWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTG 211
           K      ++ +R          +   S+  P  S  L   P  SSGS        SR   
Sbjct: 329 KRGREGGRASTRDRKMLKFISGIFTKSTGGPPGSGPLPGPPSLSSGS-------GSR--- 378

Query: 212 EAVSAVACSTGASPATWRSSVAPSDGCSLSR---EEDQDDPGDVKKGKSSL 259
                +     ASP     +V  S   +LSR   E      GD + GKSSL
Sbjct: 379 ---ELLGAELRASP----KAVINSQEWTLSRSIPELRLGVLGDARSGKSSL 422


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 41/234 (17%)

Query: 52   ALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSL 111
            AL+P+ G S  S + S G     G   T +  ++            P+S+ L P+P  +L
Sbjct: 1686 ALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLT------------PASS-LVPTPAQTL 1732

Query: 112  GSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPP-APASPSPSASLKSMSLVAKSRS 170
                            +L   P +      S   APP APASP   A   +++L   S S
Sbjct: 1733 ----------------SLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSS 1776

Query: 171  RLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRC-TGEAVSAVACSTGASPATWR 229
               L  AS    + SP        ++   L+  P S++    +A S V  ++GA+P    
Sbjct: 1777 ASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAP---- 1832

Query: 230  SSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPP 283
              +  +    L   +D+ D   ++ G  S   T+  F G      P    PPPP
Sbjct: 1833 --LPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQP----PPPP 1880



 Score = 33.9 bits (76), Expect = 0.36
 Identities = 98/427 (22%), Positives = 149/427 (34%), Gaps = 48/427 (11%)

Query: 50   SAALSPS-EGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPF 108
            SA L+ S  GP++ ++     A   P A    S   SG   S S    G ++A   PS  
Sbjct: 1460 SAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATA---PSLS 1516

Query: 109  SSLGSWRPCAFR-WRLRVPR-NLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVA 166
            SS     P         VP  N  + P  S     +   A P P++P+P+ +  S+   A
Sbjct: 1517 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPA 1576

Query: 167  KSRSR--------LWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVA 218
             S S+        +     +  APS +P L+ +P  +     +P   SS+ T   V A +
Sbjct: 1577 SSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQ-TPVPVMAPS 1635

Query: 219  CSTGASPATWRSSVAPSDGCSLSREEDQ---DDPGDVKKGKSSLHITSGVFPGLAVPLNP 275
             + G S A+     AP+   + S  +       P  +    S+   T  + P LA  L  
Sbjct: 1636 STPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQ--TLALAPALAPTLGG 1693

Query: 276  WLPLPP-------PPGRNGLNLLVSVVASIFSMLANSPLESRSTPPLLARGRLLIPLFRP 328
              P          P G      L    AS         L     PPL     L +    P
Sbjct: 1694 SSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPP 1753

Query: 329  LFFDVPAGPC-------SVGEAASGLLAGAG--------GSLDSFGLVVAAGVAVVAALG 373
            L    P GP        +   +++ LLA A           + + G   A  +A+  A  
Sbjct: 1754 LAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPAST 1813

Query: 374  TEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGSSSVTGGFGKSSGG 433
              P   + ++V+    A P   T+V     ++D  + +          S    FG     
Sbjct: 1814 QSPASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFG----- 1868

Query: 434  LGRRPCR 440
             G RP R
Sbjct: 1869 -GPRPRR 1874



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 71/261 (27%), Positives = 100/261 (38%), Gaps = 56/261 (21%)

Query: 176  DASSSAPSASPVLSS----VPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSS 231
            + S+SAP A+P+  S    VP S  G   SP P  +            S  ASP +   S
Sbjct: 1384 EVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPN-----------SSPLASPVSSTVS 1432

Query: 232  VAPSDGCSLSREEDQDDPGD----------VKKGKSSLHITSGVFPGLAVPLNPWLPLPP 281
            V  S    +S       P            +    S   + + V P LA P+ P  P PP
Sbjct: 1433 VPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLA-PVVPAAPGPP 1491

Query: 282  PPGRNGLNLLVSVVASIFSM-LANSP-LESRSTP--PLL-----------------ARGR 320
                +G     S  AS  ++ LA +P L S  TP  PLL                 A   
Sbjct: 1492 SLAPSG----ASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSP 1547

Query: 321  LLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGLVVAAGVAVVAALGTEPPKLS 380
            +L+P    L    P+ P +   A + LLA A  +  +    +A   A   A+    P  +
Sbjct: 1548 VLVPA-SALASPFPSAP-NPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSP--A 1603

Query: 381  EAVVLLPVLA-GPGSATLVFS 400
              +  LPVLA  PG+A ++ S
Sbjct: 1604 PPLAPLPVLAPSPGAAPVLAS 1624


>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
          Length = 904

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 56/239 (23%), Positives = 86/239 (35%), Gaps = 30/239 (12%)

Query: 34  SVFGFLSSSLFSEDLFSAALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSG 93
           S  G+ S++  +    S    P   P    A+   G +P   A  TT +  S   ++   
Sbjct: 344 SPMGWSSAAPCTAAAASHPAVPPSAPDPRPATPQGGGAPRVAAPQTTLSSSSTSAATVDP 403

Query: 94  AGWGPSSA-----------VLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCS 142
             W PS++             A  P +SL    P       +     +    + QA    
Sbjct: 404 PAWTPSASRTQQARNKFFQTSAVPPGTSLSGRGPTPSLVLSKDSSKEQARNFLKQALSAL 463

Query: 143 CEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVP--CSSSGSWL 200
            EA  PAP  PSP+      + V  S+ +    +A  ++P A P+ SS P          
Sbjct: 464 EEAGAPAPGRPSPAT-----AAVPSSQPK---TEAPQASPLAKPLQSSSPRVLGLPSRME 515

Query: 201 SPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDP-GDVKKGKSS 258
            P P S+  T +A         A P   R ++A S G        +  P   + KGKS+
Sbjct: 516 PPAPLSTSSTSQA--------SALPPAGRRNLAESSGVGRVGAGSRPKPEAPMAKGKST 566



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 42/238 (17%)

Query: 51  AALSPSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSS 110
           +A  P+ G S + AS  A  +P P A S TS  V             PS + LAP+P  +
Sbjct: 285 SAWEPAAGNSPARASVPA--APNPAATSATSVHVRSPAR--------PSESRLAPTP--T 332

Query: 111 LGSWRP-----CAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLV 165
            G  RP         W    P           A+  S  A PP+   P P A+ +     
Sbjct: 333 EGKVRPRVTNSSPMGWSSAAP---------CTAAAASHPAVPPSAPDPRP-ATPQGGGAP 382

Query: 166 AKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASP 225
             +  +  L  +S+SA +  P           +W    P +SR T +A +    ++   P
Sbjct: 383 RVAAPQTTLSSSSTSAATVDP----------PAW---TPSASR-TQQARNKFFQTSAVPP 428

Query: 226 ATWRSSVAPSDGCSLSREEDQDDPGD-VKKGKSSLHITSGVFPGLAVPLNPWLPLPPP 282
            T  S   P+    LS++  ++   + +K+  S+L       PG   P    +P   P
Sbjct: 429 GTSLSGRGPTPSLVLSKDSSKEQARNFLKQALSALEEAGAPAPGRPSPATAAVPSSQP 486


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 126  PRNLKLFPQVS--QASFCSCE------AAPPAPASPSPSASLKSMSLVAKSRSRLWLLDA 177
            P+N  + PQ +  Q S   CE      AA   P +P+P          A  + R+    +
Sbjct: 2080 PKN-GVLPQATGDQKSGGKCETDRRMVAARTEPLTPNP----------ASKKPRVHKRGS 2128

Query: 178  SSSAPSASPVLSSVPCSSSGSWLSPRPCS-SRCTGEAVSAVACSTGASPATWRSSVAPSD 236
             SS+ S S    S   S S S  S   CS SR    + S+ +CS+ +S ++  +S + S 
Sbjct: 2129 ESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSS 2188

Query: 237  GCSLSREEDQDDPGDVKKGKSSLHI 261
              S S E D D+  + +K +S+ H+
Sbjct: 2189 SSSSSEESDSDEE-EAQKRESTTHM 2212


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 84/321 (26%), Positives = 114/321 (35%), Gaps = 50/321 (15%)

Query: 153 PSPSASLKSMSLVAKSRSRLWLLDASSSAPS------ASPVLSSVPCSSS-GSWLSPRPC 205
           P PSAS    SL+++ RS  W     +  P+      A P  S+ P SS+  ++  P   
Sbjct: 102 PGPSAS----SLLSQFRSPSWQTAMHTPGPTELFISGALPGSSTFPSSSALSAYQHPASF 157

Query: 206 SSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDV---KKGKSSLHIT 262
            SR      S        SP      ++P D   L   +    P  +   +     +   
Sbjct: 158 GSRPFPVPSSLSLQDPPFSPPA-NGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGP 216

Query: 263 SGVFPGLAVPLNPWLPLPPPPGRN---GLNLLVSVVASIFSMLANSPL------ESRSTP 313
           +G+ P    P  P  P PPPP R+     NLL S  A+  +   +SP        +   P
Sbjct: 217 AGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPP 276

Query: 314 P---LLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGLVVAAGVAVVA 370
           P    L R   +I  ++      P  P     A    L+  GGS  S G    A +A   
Sbjct: 277 PPERALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLS-CGGSYPSMGH--RANLACSP 333

Query: 371 ALGTEP-PKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGSSSVT----- 424
             G EP P   E     P  AGP  AT   S  G     E      A GG          
Sbjct: 334 LGGGEPSPGAGE-----PSKAGPSGATAGAS--GRATGPEAAGGGGAGGGGGGYRPIIQS 386

Query: 425 -------GGFGKSSGGLGRRP 438
                  GG+G ++GG  R P
Sbjct: 387 PGYKTGKGGYGAAAGGATRPP 407



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 55  PSEGPSVSSA-SFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
           PS G   + A S   G  P+PGA   + AG SG  +  SG   GP +A
Sbjct: 321 PSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAA 368


>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
          Length = 616

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 49/221 (22%), Positives = 73/221 (33%), Gaps = 43/221 (19%)

Query: 55  PSEGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAG--------WGPSSAVLAPS 106
           PS G +V+  S SA  S   GA +TT+AG S   +S + +G         GP+     P 
Sbjct: 398 PSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPAPGFPFPP 457

Query: 107 PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVA 166
           P+  +    P AF                           PP P  P+  A L    L A
Sbjct: 458 PWMGMPLPPPFAF---------------------------PPMPVPPAGFAGLTPEELRA 490

Query: 167 KSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLS-------PRPCSS-RCTGEAVSAVA 218
                   L+A   +      L          +L+       PRP +S   T E  + V 
Sbjct: 491 LEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNSTEETATTVV 550

Query: 219 CSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSL 259
            +  ++      +  P+ G S    E +  P     G   +
Sbjct: 551 AAASSTSIPSSEATTPTPGASPPAPEMERPPAPESVGTEEM 591


>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 22/183 (12%)

Query: 57  EGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRP 116
           +    SS S+S  +S      S  S+G S    SC  +G   + +  +    S+  SW+ 
Sbjct: 193 QSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQS 252

Query: 117 CAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLD 176
                                +S CSC+++  +  S S  +S  S +   +S        
Sbjct: 253 SR------------------TSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGT----S 290

Query: 177 ASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSD 236
           ++S +  +S   S+  C  S +  +   C S  T    S  +  T ++     SS   S 
Sbjct: 291 STSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCICWSSGTSST 350

Query: 237 GCS 239
            CS
Sbjct: 351 SCS 353



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 17/202 (8%)

Query: 40  SSSLFSEDLFSAALSPSEGPSVSSAS--FSAGASPAPGADSTTSAGVSGGFSSCSGAGWG 97
           S S  S +  S     S G S +S S  FS  +S      S TS+       SC  +   
Sbjct: 74  SCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCCCQSSRTSSTSC----SCQSSRTS 129

Query: 98  PSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSA 157
            +S     S  SS  S +        R       +     +S CSC+++  +  S +  +
Sbjct: 130 STSCSCQSSRTSSTCSCQTS------RTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQS 183

Query: 158 SLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAV 217
           S  S +   +S        ++S +  +S   S+  C SSG+  +   C S  T    S  
Sbjct: 184 SRTSSTCSCQSSGT----SSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQ 239

Query: 218 ACSTGASPATWRSSVAPSDGCS 239
           +  T ++  +W+SS   S  CS
Sbjct: 240 SSGTSSTSCSWQSS-RTSSTCS 260



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 136 SQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSS 195
           + +S CSC+++  +      S+   S      S +     +  SS  S     S+  C S
Sbjct: 13  ASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTS-----STCSCQS 67

Query: 196 SGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLS 241
           SG+  +   C S  T    S  +  T ++  +W+ S   S  C  S
Sbjct: 68  SGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCCCQS 113



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 138 ASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSG 197
           +S CSC+++  +  S S  +S  S +   +S        ++S +  +S   S+  C SSG
Sbjct: 210 SSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGT----SSTSCSWQSSRTSSTCSCQSSG 265

Query: 198 SWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSD-GCSLSR 242
           +  +   C S  T    S  +  T ++  + +SS   S   C  SR
Sbjct: 266 TSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSR 311


>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 22/183 (12%)

Query: 57  EGPSVSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRP 116
           +    SS S+S  +S      S  S+G S    SC  +G   + +  +    S+  SW+ 
Sbjct: 193 QSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQS 252

Query: 117 CAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLD 176
                                +S CSC+++  +  S S  +S  S +   +S        
Sbjct: 253 SR------------------TSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGT----S 290

Query: 177 ASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSD 236
           ++S +  +S   S+  C  S +  +   C S  T    S  +  T ++     SS   S 
Sbjct: 291 STSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCICWSSGTSST 350

Query: 237 GCS 239
            CS
Sbjct: 351 SCS 353



 Score = 36.6 bits (83), Expect = 0.056
 Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 17/206 (8%)

Query: 40  SSSLFSEDLFSAALSPSEGPSVSSAS--FSAGASPAPGADSTTSAGVSGGFSSCSGAGWG 97
           S S  S +  S     S G S +S S  FS  +S      S TS+       SC  +   
Sbjct: 74  SCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSRTSSTSC----SCQSSRTS 129

Query: 98  PSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSA 157
            +S     S  SS  S +        R       +     +S CSC+++  +  S +  +
Sbjct: 130 STSCSCQSSRTSSTCSCQTS------RTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQS 183

Query: 158 SLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAV 217
           S  S +   +S        ++S +  +S   S+  C SSG+  +   C S  T    S  
Sbjct: 184 SRTSSTCSCQSSGT----SSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQ 239

Query: 218 ACSTGASPATWRSSVAPSD-GCSLSR 242
           +  T ++  +W+SS   S   C  SR
Sbjct: 240 SSGTSSTSCSWQSSRTSSTCSCQSSR 265



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 136 SQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSS 195
           + +S CSC+++  +      S+   S      S +      ++S    +S + S+  C S
Sbjct: 13  ASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGT-----SSTSCNWQSSRISSTCSCQS 67

Query: 196 SGSWLSPRPCSSRCTGEAVSAVACSTGASPATWR-SSVAPSDGCSLSR 242
           SG+  +   C S  T    S  +  T ++  +W+ S  + +  C  SR
Sbjct: 68  SGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSR 115



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 138 ASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSG 197
           +S CSC+++  +  S S  +S  S +   +S         SS++ S     +S  CS   
Sbjct: 210 SSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSG------TSSTSCSWQSSRTSSTCSCQS 263

Query: 198 SWLSPRPCSSRCTGEAVSAVACSTGASPAT---WRSSVAPSDGCSLSR 242
           S  S   CS + +G + +    S+G S  +     S  + +  C  SR
Sbjct: 264 SRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSR 311


>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
          Length = 370

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 27/146 (18%)

Query: 147 PPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCS 206
           PP  AS  P+A     S +AKS S+  LL A+++A             +SG   +PR   
Sbjct: 47  PPGHASAGPAAM---SSHIAKSESKTSLLKAAAAA-------------ASGGSRAPRHGP 90

Query: 207 SRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVF 266
           +R  G     +    G+ PAT +SS  PS    L R   +++     +G   +   +   
Sbjct: 91  ARDPGLPSRRL---PGSCPATPQSSGDPSSRRPLCRPAPREEGA---RGSQRVLPQAHCR 144

Query: 267 PGLAVPL-----NPWLPLPPPPGRNG 287
           P  A+P      +P  PLPP  GR+G
Sbjct: 145 PREALPAAASRPSPSSPLPPARGRDG 170


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 11/119 (9%)

Query: 177 ASSSAPSASPVLSSVPC--SSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAP 234
           A ++A +A+ V  + P    ++GS   P   +++   +AV+A   +  A+ A    S AP
Sbjct: 430 AVAAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAAAAAAGSGAP 489

Query: 235 S--DGCSLSREE----DQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNG 287
              DG   ++E     ++  P  + +G        G    L  PL P  P PPPP R G
Sbjct: 490 EPLDGAEPAKESGLGAEERCPSALSRGPLD---EDGTDEALPPPLAPLPPPPPPPARKG 545


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,070,087
Number of Sequences: 37866
Number of extensions: 1262323
Number of successful extensions: 9730
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 8538
Number of HSP's gapped (non-prelim): 1234
length of query: 513
length of database: 18,247,518
effective HSP length: 107
effective length of query: 406
effective length of database: 14,195,856
effective search space: 5763517536
effective search space used: 5763517536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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