Guide to the Human Genome
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Name: LOC100289231 Sequence: fasta or formatted (101aa) NCBI GI: 239748695
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {101aa} PREDICTED: hypothetical protein XP_002342622
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.8         16           5
 C cysteine            6.9          7           1
 D aspartate           0.0          0           0
 E glutamate           1.0          1           1
 F phenylalanine       0.0          0           0
 G glycine             7.9          8           2
 H histidine           1.0          1           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             6.9          7           2
 M methionine          2.0          2           1
 N asparagine          0.0          0           0
 P proline            22.8         23           4
 Q glutamine           2.0          2           1
 R arginine           18.8         19           3
 S serine              7.9          8           1
 T threonine           1.0          1           1
 V valine              5.0          5           1
 W tryptophan          1.0          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100289231          1.000   PREDICTED: hypothetical protein XP_002342622 
LOC388906             0.108   PREDICTED: hypothetical protein 
LOC388906             0.108   PREDICTED: hypothetical protein 
LOC388906             0.108   PREDICTED: hypothetical protein 
LOC100292934          0.087   PREDICTED: hypothetical protein 
LOC100290359          0.087   PREDICTED: hypothetical protein XP_002346414 
LOC100287202          0.087   PREDICTED: hypothetical protein XP_002342114 
JUND                  0.077   jun D proto-oncogene 
WASL                  0.077   Wiskott-Aldrich syndrome gene-like protein 
LOC100293702          0.072   PREDICTED: hypothetical protein 
LOC100287504          0.072   PREDICTED: hypothetical protein 
LOC100287504          0.072   PREDICTED: hypothetical protein XP_002343166 
FLJ22184              0.062   PREDICTED: hypothetical protein FLJ22184 
LOC729570             0.062   PREDICTED: hypothetical protein 
LOC643355             0.062   PREDICTED: hypothetical protein 
LOC100289316          0.062   PREDICTED: hypothetical protein 
LOC729570             0.062   PREDICTED: hypothetical protein 
LOC100289316          0.062   PREDICTED: hypothetical protein XP_002343619 
LOC729570             0.062   PREDICTED: hypothetical protein 
TAF4                  0.062   TBP-associated factor 4 
SRRM1                 0.062   serine/arginine repetitive matrix 1 
LOC100131455          0.062   PREDICTED: hypothetical protein 
LOC100131455          0.062   PREDICTED: hypothetical protein 
LOC100131455          0.062   PREDICTED: hypothetical protein 
WIPF1                 0.062   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.062   WAS/WASL interacting protein family, member 1 
KISS1R                0.062   G protein-coupled receptor 54 
LOC729991-MEF2B       0.056   myocyte enhancer factor 2B isoform b 
LOC100291220          0.056   PREDICTED: hypothetical protein XP_002347633 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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