Guide to the Human Genome
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Search of human proteins with 239748080

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
         (103 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753580 PREDICTED: hypothetical protein [Homo sapiens]           206   2e-54
gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]           206   2e-54
gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo ...   206   2e-54
gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]            37   0.004
gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo ...    37   0.004
gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo ...    37   0.004
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            36   0.007
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            35   0.013
gi|7657575 sirtuin 1 isoform a [Homo sapiens]                          34   0.022
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    33   0.037
gi|146219841 PNMA-like 2 [Homo sapiens]                                33   0.037
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s...    33   0.048
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s...    33   0.048
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       33   0.063
gi|38505159 transcription factor-like 5 protein [Homo sapiens]         32   0.082
gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens]         32   0.11 
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 
gi|239751269 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ...    32   0.14 
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]             32   0.14 
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      31   0.18 
gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]            31   0.18 
gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo ...    31   0.18 
gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo ...    31   0.18 
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    31   0.24 
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             31   0.24 
gi|58219030 hypothetical protein LOC399726 [Homo sapiens]              31   0.24 
gi|4758216 dishevelled 2 [Homo sapiens]                                30   0.31 
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]            30   0.31 
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]            30   0.31 

>gi|239753580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  206 bits (525), Expect = 2e-54
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
           MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60

Query: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
           PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103


>gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  206 bits (525), Expect = 2e-54
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
           MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60

Query: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
           PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103


>gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo
           sapiens]
          Length = 103

 Score =  206 bits (525), Expect = 2e-54
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
           MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1   MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60

Query: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
           PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61  PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103


>gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 270

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 14  GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
           G R+  +G  +P         R+   R R R  AG  ++G    PG P   EG    LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159

Query: 74  VLPVLVVACRGATVARRYLVAQG 96
           +LP+L+++  GAT  RR L  +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180


>gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo
           sapiens]
          Length = 270

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 14  GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
           G R+  +G  +P         R+   R R R  AG  ++G    PG P   EG    LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159

Query: 74  VLPVLVVACRGATVARRYLVAQG 96
           +LP+L+++  GAT  RR L  +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180


>gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo
           sapiens]
          Length = 270

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 14  GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
           G R+  +G  +P         R+   R R R  AG  ++G    PG P   EG    LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159

Query: 74  VLPVLVVACRGATVARRYLVAQG 96
           +LP+L+++  GAT  RR L  +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 35.8 bits (81), Expect = 0.007
 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 1/89 (1%)

Query: 4   LTGSKAYGEAGGRSRSAG-GTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPA 62
           L GS+  G      R A  G  P + R    C    G  RRRAP+  G R   A    P 
Sbjct: 79  LPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPP 138

Query: 63  GAEGEVESLPKVLPVLVVACRGATVARRY 91
                   LP+ +   V    G ++ RR+
Sbjct: 139 RQRSLARCLPRSVGSCVRPSVGPSLPRRH 167


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 8/61 (13%)

Query: 6   GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAE 65
           G KA    GG+SRS GG  P   RRG   R+++      A AG  SRG + +  + A A 
Sbjct: 431 GPKAAKSRGGKSRSGGGKKP--RRRGQKARQKA------AEAGAESRGDKKQGRQKASAA 482

Query: 66  G 66
           G
Sbjct: 483 G 483



 Score = 34.3 bits (77), Expect = 0.022
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 6   GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAE 65
           G+K+ G  G +SR +GG    S ++    +   G   +R   G    G ++R GE A   
Sbjct: 728 GAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG----GAKSRSGEKAVTA 783

Query: 66  G 66
           G
Sbjct: 784 G 784



 Score = 28.9 bits (63), Expect = 0.91
 Identities = 17/45 (37%), Positives = 21/45 (46%)

Query: 9   AYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRG 53
           A G  G   +S GG +P   R G   R R  +A + A AGT   G
Sbjct: 300 AKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGG 344



 Score = 26.9 bits (58), Expect = 3.5
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 15  GRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKV 74
           G+  + GG       RG G ++   + +  A AG   RG  A  GE   A+G     PK 
Sbjct: 252 GQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGA-ATAGEKPAAKGRGGRGPKS 310

Query: 75  L 75
           L
Sbjct: 311 L 311



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 14  GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEG 66
           G +SR  GG  P   RR        G++R     G G + +R R G+ A   G
Sbjct: 234 GAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLR-RQGQNAALAG 285



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 15/69 (21%)

Query: 13  AGGRSRSAGGTDPA----SARRGW-------GCRERSGRARRRAPAGTGSRGVRARP--- 58
           AGG+     G   A     AR+ W       G   R G  ++ A AGT S G R R    
Sbjct: 66  AGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRR 125

Query: 59  -GEPAGAEG 66
            G+ A A G
Sbjct: 126 RGQKAAATG 134



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 25  PASARRGWGCRERSGRARRRAPAGTGSRGVRARPG 59
           PA+  RG G    S + RRR P    SRG ++R G
Sbjct: 415 PAAKPRGGG----SKKPRRRGPKAAKSRGGKSRSG 445


>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
          Length = 747

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 15  GRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKV 74
           G S SA G D  +A         +G   R+ P   G  G+   PGEP GA  E E     
Sbjct: 12  GGSPSAAGADREAAS------SPAGEPLRKRPRRDGP-GLERSPGEPGGAAPERE----- 59

Query: 75  LPVLVVACRGATVARRYLVAQGAASVSRG 103
           +P     C GA  A  +  A+  A+ + G
Sbjct: 60  VPAAARGCPGAAAAALWREAEAEAAAAGG 88


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 11  GEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVES 70
           G   G   +A    P +A +  G    +G A   APA  G  GV  +PG  A A      
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGS---AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPG 341

Query: 71  LPKVLPVLVVACRGATVARRYLVAQGAASVS 101
           +    P  VV  + A  A + L A G AS +
Sbjct: 342 VKAESPKRVV--QAAPPAAQTLAASGPASTA 370


>gi|146219841 PNMA-like 2 [Homo sapiens]
          Length = 635

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 4   LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPG 59
           +T  K  G  G     A G+       G G   R+G A+ +AP G+  +RG +AR G
Sbjct: 571 VTPEKKAGSRGSAQDDAAGSRKKKGSAGAGAHARAGEAKGQAPTGSKAARGKKARRG 627


>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
           sapiens]
          Length = 655

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 6   GSKAYGEAG-GRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGSRGVRARPGEP 61
           G ++ G +G G +RS  G D     RG    G   R GR   R   G G RG   +PG P
Sbjct: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGP 338

Query: 62  AGAEGEVESLPKVLP 76
                +++  P V P
Sbjct: 339 MDEGPDLDLGPPVDP 353


>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
           sapiens]
          Length = 661

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 6   GSKAYGEAG-GRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGSRGVRARPGEP 61
           G ++ G +G G +RS  G D     RG    G   R GR   R   G G RG   +PG P
Sbjct: 285 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGP 344

Query: 62  AGAEGEVESLPKVLP 76
                +++  P V P
Sbjct: 345 MDEGPDLDLGPPVDP 359


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 4   LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGEP 61
           L G K    A G    AG T P  A    G R   G   R  P G  G RG    PG+P
Sbjct: 307 LEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365



 Score = 27.3 bits (59), Expect = 2.6
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 6   GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAG-TGSRGVRARPGEPAGA 64
           GS     A G   + G   P  +    G    +G      P G TG +G+R +PG+P   
Sbjct: 414 GSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVP 473

Query: 65  EGEVESLPKVLP 76
             + E+ PK  P
Sbjct: 474 GFKGEAGPKGEP 485


>gi|38505159 transcription factor-like 5 protein [Homo sapiens]
          Length = 500

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 12  EAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESL 71
           EAG   +++GG D A AR     +E +G A   A    G+   RA+P      E    S+
Sbjct: 136 EAGAAEKTSGGGDGARARADGAAKEGAG-AAAAAAGPDGAPEARAKPAVRVRLEDRFNSI 194

Query: 72  PKVLP 76
           P   P
Sbjct: 195 PAEPP 199


>gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens]
          Length = 160

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 9/96 (9%)

Query: 13  AGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVR--ARPGEP-----AGAE 65
           A G  R       A ARR    R R G  R     G G+R  R  AR   P      GAE
Sbjct: 36  APGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRGAE 95

Query: 66  GEVESLPKVLPVLVVACRGATVARRYLVAQGAASVS 101
           G  E LP   P     C  A +A R  +A+   S S
Sbjct: 96  GGAELLP--FPRDRGPCTLAQMAMRSALARVVDSTS 129


>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 261

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 26 ASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVLPVLVVACRGA 85
          A +RR W    R+ R+R+ A  G GSR   ARPG  AG  GEV       P    A R A
Sbjct: 9  AHSRRKWRGSWRT-RSRQEARPGGGSR---ARPGPGAGPGGEVLGRSSSTPASSKASRTA 64

Query: 86 TVAR 89
           + +
Sbjct: 65 QMRK 68


>gi|239751269 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 130

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 5  TGSKAYGEAGGRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGS---RGVRARP 58
          +GS   G     + ++G   PAS RRGW    C     + R R P  T S         P
Sbjct: 4  SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63

Query: 59 GEPAGAEGEVESLP--KVLPVLVVACRG 84
          G   G EG+ ++     VLP+L+   RG
Sbjct: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRG 91


>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
          sapiens]
          Length = 261

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 26 ASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVLPVLVVACRGA 85
          A +RR W    R+ R+R+ A  G GSR   ARPG  AG  GEV       P    A R A
Sbjct: 9  AHSRRKWRGSWRT-RSRQEARPGGGSR---ARPGPGAGPGGEVLGRSSSTPASSKASRTA 64

Query: 86 TVAR 89
           + +
Sbjct: 65 QMRK 68


>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 212

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 22/97 (22%)

Query: 2   QDLTGSKAYGEAGGRSRSAGGTDPASARRG------W----GCRERSGRARRRAPAGTGS 51
           Q ++  +  G AG RSR   G    +A         W     C   + R RR  P G  S
Sbjct: 60  QPISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGARS 119

Query: 52  RGV----------RARPGEPAGAEGEVESLPKVLPVL 78
           R V          R+RP    GA G   S+P +LP L
Sbjct: 120 RPVAASPAASSRARSRPESSPGAPGS--SVPALLPSL 154


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 6   GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGE--PA 62
           G++    A G +   G T PA      G     G A  + P G+ G +GVR  PG   PA
Sbjct: 320 GARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379

Query: 63  GAEG 66
           GA G
Sbjct: 380 GAAG 383



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 4   LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGEPA 62
           L G K +    G   + G   PA  +   G    +G   +  P G  G RG    PG PA
Sbjct: 261 LPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPG-PA 319

Query: 63  GAEG 66
           GA G
Sbjct: 320 GARG 323


>gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 207

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
          G  GG +R  GG  P      A+A R    RE  G++  + PA   TG  G  +R G   
Sbjct: 8  GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPRTGEVGAGSRWGRGL 62

Query: 63 GAEGEVESLPKVLPVLVVACRG 84
          G  G+ + LP+V P   ++  G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84


>gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo
          sapiens]
          Length = 207

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
          G  GG +R  GG  P      A+A R    RE  G++  + PA   TG  G  +R G   
Sbjct: 8  GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62

Query: 63 GAEGEVESLPKVLPVLVVACRG 84
          G  G+ + LP+V P   ++  G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84


>gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo
          sapiens]
          Length = 207

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
          G  GG +R  GG  P      A+A R    RE  G++  + PA   TG  G  +R G   
Sbjct: 8  GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62

Query: 63 GAEGEVESLPKVLPVLVVACRG 84
          G  G+ + LP+V P   ++  G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 4   LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAG 63
           LT  +      GR R AG T   + RR    R R G +RR  PA +  R     P     
Sbjct: 808 LTAGRRVRRESGRRR-AGATSQGAIRRA-ASRARKGESRRPLPANSAGRPALPSPAAARS 865

Query: 64  AEG 66
           A G
Sbjct: 866 ARG 868


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 11  GEAGGRSRSAGGTDPA-SARRGWGCRERSGRARRRAPAGTGSRG-VRARPGEPAGAEGEV 68
           G   G  RS+G   P+ S   GWG  +R+G + +R+ A  G  G   + P +P+     V
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 14  GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGA 64
           G   R+AGG   A  RR    R R  R+   AP   G R  R RP  P G+
Sbjct: 374 GRGGRAAGG---AGRRRRRRRRRRRSRSSASAPRRRGRR--RPRPAPPRGS 419


>gi|58219030 hypothetical protein LOC399726 [Homo sapiens]
          Length = 136

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 16 RSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVL 75
          +SR   G   A  RRGW C        R  P  +G RG  A    PA   G  E+  +  
Sbjct: 2  QSREPSGWRTAERRRGWRC--------RGVPTPSGDRGPGA--ARPAARGGAGETTGQQR 51

Query: 76 PVLVVACRGATVARRYL 92
          P+ V     A    R L
Sbjct: 52 PLQVPGASAAAARTRLL 68


>gi|4758216 dishevelled 2 [Homo sapiens]
          Length = 736

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query: 7   SKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGA 64
           S  YG     S+ + G+  + + R  G   R+GR   RAP      G  + P    G+
Sbjct: 573 SYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGS 630


>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 23/85 (27%)

Query: 15  GRSRSAGGTDPASARRGWGCRER---------SGRARRRAPAGTG-SRGVRARPGEPAGA 64
           G  RSA  + P S+RR  G R R         SG  R R  A T  SR  R R    + A
Sbjct: 33  GTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAA 92

Query: 65  E-------------GEVESLPKVLP 76
           +              E+ESLP +LP
Sbjct: 93  DTRFSRLLFWAPGTQELESLPPLLP 117


>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 10/59 (16%)

Query: 18 RSAGGTDPASARRGWGCRERSGRARRRAP----------AGTGSRGVRARPGEPAGAEG 66
          R A G  P   R GW  R R      R P           GT +R +RA PG   G  G
Sbjct: 9  RLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSG 67


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,335,643
Number of Sequences: 37866
Number of extensions: 227263
Number of successful extensions: 1832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 469
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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