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Search of human proteins with 239748080
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753580 PREDICTED: hypothetical protein [Homo sapiens] 206 2e-54
gi|239748080 PREDICTED: hypothetical protein [Homo sapiens] 206 2e-54
gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo ... 206 2e-54
gi|239757699 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo ... 37 0.004
gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo ... 37 0.004
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 36 0.007
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 34 0.022
gi|110832843 TBP-associated factor 4 [Homo sapiens] 33 0.037
gi|146219841 PNMA-like 2 [Homo sapiens] 33 0.037
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 33 0.048
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 33 0.048
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 33 0.063
gi|38505159 transcription factor-like 5 protein [Homo sapiens] 32 0.082
gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens] 32 0.11
gi|239751736 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|239751269 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo ... 32 0.14
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 31 0.18
gi|239754145 PREDICTED: hypothetical protein [Homo sapiens] 31 0.18
gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo ... 31 0.18
gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo ... 31 0.18
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 31 0.24
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 31 0.24
gi|58219030 hypothetical protein LOC399726 [Homo sapiens] 31 0.24
gi|4758216 dishevelled 2 [Homo sapiens] 30 0.31
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens] 30 0.31
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 30 0.31
>gi|239753580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 206 bits (525), Expect = 2e-54
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
Query: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
>gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 206 bits (525), Expect = 2e-54
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
Query: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
>gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo
sapiens]
Length = 103
Score = 206 bits (525), Expect = 2e-54
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE
Sbjct: 1 MQDLTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGE 60
Query: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG
Sbjct: 61 PAGAEGEVESLPKVLPVLVVACRGATVARRYLVAQGAASVSRG 103
>gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]
Length = 270
Score = 36.6 bits (83), Expect = 0.004
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 14 GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
G R+ +G +P R+ R R R AG ++G PG P EG LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159
Query: 74 VLPVLVVACRGATVARRYLVAQG 96
+LP+L+++ GAT RR L +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180
>gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo
sapiens]
Length = 270
Score = 36.6 bits (83), Expect = 0.004
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 14 GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
G R+ +G +P R+ R R R AG ++G PG P EG LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159
Query: 74 VLPVLVVACRGATVARRYLVAQG 96
+LP+L+++ GAT RR L +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180
>gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo
sapiens]
Length = 270
Score = 36.6 bits (83), Expect = 0.004
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 14 GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPK 73
G R+ +G +P R+ R R R AG ++G PG P EG LP+
Sbjct: 107 GARASRSGPQEPPPPGSTVSRRKAGNRPRLRGTAGGKAQG----PGNP---EGPSSLLPR 159
Query: 74 VLPVLVVACRGATVARRYLVAQG 96
+LP+L+++ GAT RR L +G
Sbjct: 160 LLPLLLLS--GATRDRRRLWGEG 180
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 35.8 bits (81), Expect = 0.007
Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 4 LTGSKAYGEAGGRSRSAG-GTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPA 62
L GS+ G R A G P + R C G RRRAP+ G R A P
Sbjct: 79 LPGSRRLGRVPLTFREASPGPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPP 138
Query: 63 GAEGEVESLPKVLPVLVVACRGATVARRY 91
LP+ + V G ++ RR+
Sbjct: 139 RQRSLARCLPRSVGSCVRPSVGPSLPRRH 167
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 6 GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAE 65
G KA GG+SRS GG P RRG R+++ A AG SRG + + + A A
Sbjct: 431 GPKAAKSRGGKSRSGGGKKP--RRRGQKARQKA------AEAGAESRGDKKQGRQKASAA 482
Query: 66 G 66
G
Sbjct: 483 G 483
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 6 GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAE 65
G+K+ G G +SR +GG S ++ + G +R G G ++R GE A
Sbjct: 728 GAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG----GAKSRSGEKAVTA 783
Query: 66 G 66
G
Sbjct: 784 G 784
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 9 AYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRG 53
A G G +S GG +P R G R R +A + A AGT G
Sbjct: 300 AKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGG 344
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 15 GRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKV 74
G+ + GG RG G ++ + + A AG RG A GE A+G PK
Sbjct: 252 GQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGA-ATAGEKPAAKGRGGRGPKS 310
Query: 75 L 75
L
Sbjct: 311 L 311
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 14 GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEG 66
G +SR GG P RR G++R G G + +R R G+ A G
Sbjct: 234 GAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLR-RQGQNAALAG 285
Score = 26.2 bits (56), Expect = 5.9
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 15/69 (21%)
Query: 13 AGGRSRSAGGTDPA----SARRGW-------GCRERSGRARRRAPAGTGSRGVRARP--- 58
AGG+ G A AR+ W G R G ++ A AGT S G R R
Sbjct: 66 AGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRR 125
Query: 59 -GEPAGAEG 66
G+ A A G
Sbjct: 126 RGQKAAATG 134
Score = 26.2 bits (56), Expect = 5.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 25 PASARRGWGCRERSGRARRRAPAGTGSRGVRARPG 59
PA+ RG G S + RRR P SRG ++R G
Sbjct: 415 PAAKPRGGG----SKKPRRRGPKAAKSRGGKSRSG 445
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 15 GRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKV 74
G S SA G D +A +G R+ P G G+ PGEP GA E E
Sbjct: 12 GGSPSAAGADREAAS------SPAGEPLRKRPRRDGP-GLERSPGEPGGAAPERE----- 59
Query: 75 LPVLVVACRGATVARRYLVAQGAASVSRG 103
+P C GA A + A+ A+ + G
Sbjct: 60 VPAAARGCPGAAAAALWREAEAEAAAAGG 88
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 33.5 bits (75), Expect = 0.037
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 11 GEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVES 70
G G +A P +A + G +G A APA G GV +PG A A
Sbjct: 285 GHPAGPPTAAPAVPPPAAAQNGGS---AGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPG 341
Query: 71 LPKVLPVLVVACRGATVARRYLVAQGAASVS 101
+ P VV + A A + L A G AS +
Sbjct: 342 VKAESPKRVV--QAAPPAAQTLAASGPASTA 370
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 4 LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPG 59
+T K G G A G+ G G R+G A+ +AP G+ +RG +AR G
Sbjct: 571 VTPEKKAGSRGSAQDDAAGSRKKKGSAGAGAHARAGEAKGQAPTGSKAARGKKARRG 627
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 33.1 bits (74), Expect = 0.048
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 6 GSKAYGEAG-GRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGSRGVRARPGEP 61
G ++ G +G G +RS G D RG G R GR R G G RG +PG P
Sbjct: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGP 338
Query: 62 AGAEGEVESLPKVLP 76
+++ P V P
Sbjct: 339 MDEGPDLDLGPPVDP 353
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 33.1 bits (74), Expect = 0.048
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 6 GSKAYGEAG-GRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGSRGVRARPGEP 61
G ++ G +G G +RS G D RG G R GR R G G RG +PG P
Sbjct: 285 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGP 344
Query: 62 AGAEGEVESLPKVLP 76
+++ P V P
Sbjct: 345 MDEGPDLDLGPPVDP 359
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 32.7 bits (73), Expect = 0.063
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 4 LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGEP 61
L G K A G AG T P A G R G R P G G RG PG+P
Sbjct: 307 LEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKP 365
Score = 27.3 bits (59), Expect = 2.6
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 6 GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAG-TGSRGVRARPGEPAGA 64
GS A G + G P + G +G P G TG +G+R +PG+P
Sbjct: 414 GSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVP 473
Query: 65 EGEVESLPKVLP 76
+ E+ PK P
Sbjct: 474 GFKGEAGPKGEP 485
>gi|38505159 transcription factor-like 5 protein [Homo sapiens]
Length = 500
Score = 32.3 bits (72), Expect = 0.082
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 12 EAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESL 71
EAG +++GG D A AR +E +G A A G+ RA+P E S+
Sbjct: 136 EAGAAEKTSGGGDGARARADGAAKEGAG-AAAAAAGPDGAPEARAKPAVRVRLEDRFNSI 194
Query: 72 PKVLP 76
P P
Sbjct: 195 PAEPP 199
>gi|148747397 deleted in lymphocytic leukemia, 7 [Homo sapiens]
Length = 160
Score = 32.0 bits (71), Expect = 0.11
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 13 AGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVR--ARPGEP-----AGAE 65
A G R A ARR R R G R G G+R R AR P GAE
Sbjct: 36 APGNPRDPDHVSTAPARRSGPPRARPGPGREERGGGVGTRSRRTAARANSPEEEVVRGAE 95
Query: 66 GEVESLPKVLPVLVVACRGATVARRYLVAQGAASVS 101
G E LP P C A +A R +A+ S S
Sbjct: 96 GGAELLP--FPRDRGPCTLAQMAMRSALARVVDSTS 129
>gi|239751736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 26 ASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVLPVLVVACRGA 85
A +RR W R+ R+R+ A G GSR ARPG AG GEV P A R A
Sbjct: 9 AHSRRKWRGSWRT-RSRQEARPGGGSR---ARPGPGAGPGGEVLGRSSSTPASSKASRTA 64
Query: 86 TVAR 89
+ +
Sbjct: 65 QMRK 68
>gi|239751269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 130
Score = 31.6 bits (70), Expect = 0.14
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 5 TGSKAYGEAGGRSRSAGGTDPASARRGW---GCRERSGRARRRAPAGTGS---RGVRARP 58
+GS G + ++G PAS RRGW C + R R P T S P
Sbjct: 4 SGSLGSGFQTQGTPASGAPLPASPRRGWKKGKCLACGNQIRERNPHRTQSLVCPWPHVSP 63
Query: 59 GEPAGAEGEVESLP--KVLPVLVVACRG 84
G G EG+ ++ VLP+L+ RG
Sbjct: 64 GRKEGVEGKDDAPAGMAVLPLLLFLLRG 91
>gi|239746237 PREDICTED: hypothetical protein XP_002343710 [Homo
sapiens]
Length = 261
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 26 ASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVLPVLVVACRGA 85
A +RR W R+ R+R+ A G GSR ARPG AG GEV P A R A
Sbjct: 9 AHSRRKWRGSWRT-RSRQEARPGGGSR---ARPGPGAGPGGEVLGRSSSTPASSKASRTA 64
Query: 86 TVAR 89
+ +
Sbjct: 65 QMRK 68
>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 31.6 bits (70), Expect = 0.14
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 22/97 (22%)
Query: 2 QDLTGSKAYGEAGGRSRSAGGTDPASARRG------W----GCRERSGRARRRAPAGTGS 51
Q ++ + G AG RSR G +A W C + R RR P G S
Sbjct: 60 QPISAPEGRGGAGSRSRYCHGDGKLAAAAAGTVGPRWLPAGQCLSEAERPRRPEPGGARS 119
Query: 52 RGV----------RARPGEPAGAEGEVESLPKVLPVL 78
R V R+RP GA G S+P +LP L
Sbjct: 120 RPVAASPAASSRARSRPESSPGAPGS--SVPALLPSL 154
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 31.2 bits (69), Expect = 0.18
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 6 GSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGE--PA 62
G++ A G + G T PA G G A + P G+ G +GVR PG PA
Sbjct: 320 GARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379
Query: 63 GAEG 66
GA G
Sbjct: 380 GAAG 383
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 4 LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGT-GSRGVRARPGEPA 62
L G K + G + G PA + G +G + P G G RG PG PA
Sbjct: 261 LPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPG-PA 319
Query: 63 GAEG 66
GA G
Sbjct: 320 GARG 323
>gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 207
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPRTGEVGAGSRWGRGL 62
Query: 63 GAEGEVESLPKVLPVLVVACRG 84
G G+ + LP+V P ++ G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84
>gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo
sapiens]
Length = 207
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
Query: 63 GAEGEVESLPKVLPVLVVACRG 84
G G+ + LP+V P ++ G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84
>gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo
sapiens]
Length = 207
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
Query: 63 GAEGEVESLPKVLPVLVVACRG 84
G G+ + LP+V P ++ G
Sbjct: 63 GGAGKAQPLPEVDPAAALSPAG 84
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 4 LTGSKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAG 63
LT + GR R AG T + RR R R G +RR PA + R P
Sbjct: 808 LTAGRRVRRESGRRR-AGATSQGAIRRA-ASRARKGESRRPLPANSAGRPALPSPAAARS 865
Query: 64 AEG 66
A G
Sbjct: 866 ARG 868
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 11 GEAGGRSRSAGGTDPA-SARRGWGCRERSGRARRRAPAGTGSRG-VRARPGEPAGAEGEV 68
G G RS+G P+ S GWG +R+G + +R+ A G G + P +P+ V
Sbjct: 286 GRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRV 345
Score = 26.6 bits (57), Expect = 4.5
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 14 GGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGA 64
G R+AGG A RR R R R+ AP G R R RP P G+
Sbjct: 374 GRGGRAAGG---AGRRRRRRRRRRRSRSSASAPRRRGRR--RPRPAPPRGS 419
>gi|58219030 hypothetical protein LOC399726 [Homo sapiens]
Length = 136
Score = 30.8 bits (68), Expect = 0.24
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 10/77 (12%)
Query: 16 RSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGAEGEVESLPKVL 75
+SR G A RRGW C R P +G RG A PA G E+ +
Sbjct: 2 QSREPSGWRTAERRRGWRC--------RGVPTPSGDRGPGA--ARPAARGGAGETTGQQR 51
Query: 76 PVLVVACRGATVARRYL 92
P+ V A R L
Sbjct: 52 PLQVPGASAAAARTRLL 68
>gi|4758216 dishevelled 2 [Homo sapiens]
Length = 736
Score = 30.4 bits (67), Expect = 0.31
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 7 SKAYGEAGGRSRSAGGTDPASARRGWGCRERSGRARRRAPAGTGSRGVRARPGEPAGA 64
S YG S+ + G+ + + R G R+GR RAP G + P G+
Sbjct: 573 SYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGS 630
>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 30.4 bits (67), Expect = 0.31
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 23/85 (27%)
Query: 15 GRSRSAGGTDPASARRGWGCRER---------SGRARRRAPAGTG-SRGVRARPGEPAGA 64
G RSA + P S+RR G R R SG R R A T SR R R + A
Sbjct: 33 GTPRSAQSSHPGSSRRRSGTRRRRPPRTAPTCSGAPRTRCTACTARSRSPRRRTSRLSAA 92
Query: 65 E-------------GEVESLPKVLP 76
+ E+ESLP +LP
Sbjct: 93 DTRFSRLLFWAPGTQELESLPPLLP 117
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 30.4 bits (67), Expect = 0.31
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 10/59 (16%)
Query: 18 RSAGGTDPASARRGWGCRERSGRARRRAP----------AGTGSRGVRARPGEPAGAEG 66
R A G P R GW R R R P GT +R +RA PG G G
Sbjct: 9 RLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSG 67
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,335,643
Number of Sequences: 37866
Number of extensions: 227263
Number of successful extensions: 1832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 469
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.