Guide to the Human Genome
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Search of human proteins with 239747930

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239747930 PREDICTED: hypothetical protein [Homo sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747930 PREDICTED: hypothetical protein [Homo sapiens]           445   e-125
gi|239741824 PREDICTED: hypothetical protein [Homo sapiens]           445   e-125
gi|239753362 PREDICTED: hypothetical protein [Homo sapiens]           442   e-125
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]               40   0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        39   0.004
gi|163965366 nascent polypeptide-associated complex alpha subuni...    39   0.004
gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]            37   0.009
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    37   0.009
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    37   0.009
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap...    37   0.009
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap...    37   0.009
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ...    37   0.012
gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ...    37   0.012
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ...    37   0.012
gi|223941923 OTU domain containing 1 [Homo sapiens]                    36   0.021
gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo ...    36   0.021
gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]    36   0.021
gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapi...    36   0.021
gi|38683860 insulin receptor substrate 2 [Homo sapiens]                35   0.036
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     35   0.036
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]               35   0.036
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]               35   0.036
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]                35   0.036
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              35   0.047
gi|18959210 WIRE protein [Homo sapiens]                                35   0.047
gi|67089160 promyelocytic leukemia protein isoform 11 [Homo sapi...    35   0.061
gi|15451779 promyelocytic leukemia protein isoform 10 [Homo sapi...    35   0.061
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]            35   0.061
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     35   0.061
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ...    34   0.079

>gi|239747930 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score =  445 bits (1145), Expect = e-125
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
           MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60

Query: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
           PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120

Query: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
           RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180

Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
           SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211


>gi|239741824 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score =  445 bits (1145), Expect = e-125
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
           MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60

Query: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
           PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120

Query: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
           RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180

Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
           SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211


>gi|239753362 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score =  442 bits (1138), Expect = e-125
 Identities = 210/211 (99%), Positives = 210/211 (99%)

Query: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60
           MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR
Sbjct: 1   MSSGSNSSQQLDLLSQLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGR 60

Query: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120
           PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV
Sbjct: 61  PPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV 120

Query: 121 RGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180
            GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ
Sbjct: 121 PGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQ 180

Query: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211
           SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF
Sbjct: 181 SAAASKRGLSLSPPQPGPRRPLFRGHQHGSF 211


>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
          Length = 1910

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 17/127 (13%)

Query: 90   KIDQMQARL-PAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKT-PKSTDWAV 147
            ++DQ + ++ P+  A+ +C  P++     L  R    + PPPP P + GK   K++D   
Sbjct: 1337 ELDQKEPQMSPSVAASLSCPVPSTP--PELSQRATLDTVPPPP-PSKVGKRCRKTSDPRR 1393

Query: 148  KEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRR----PLF 203
               EC P ++    V T   P  P   R          ++GLSLSP  P  RR    P  
Sbjct: 1394 SIVECQPDASATPGVGTADSPAAPTDSRD--------DQKGLSLSPQSPPERRGYPGPGL 1445

Query: 204  RGHQHGS 210
            R   H S
Sbjct: 1446 RSDWHAS 1452


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 10/156 (6%)

Query: 54   PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
            PH + G PPA      P    +   + E+ S   +       +   ++ ++ +  G +S+
Sbjct: 2502 PHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSS 2561

Query: 114  GHQ--------RLGVRGRPLSAPPPPKPVREGKTPKSTDWAVK--EDECLPKSAPRGQVS 163
              +         + ++  P   P P + VREG+ P+ T    K         S+     S
Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSS 2621

Query: 164  TQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPR 199
            +     + +    +   S+++S    S SP +PGP+
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQ 2657



 Score = 35.4 bits (80), Expect = 0.036
 Identities = 46/217 (21%), Positives = 78/217 (35%), Gaps = 31/217 (14%)

Query: 2    SSGSNSSQQLDLLSQLVNTANGRPGTMRSSPE---EPCPHPLGSRSEAYRGCLHKPHQNR 58
            SS S+SS      S   ++++    ++   PE   +  P P  +  EA R          
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVR---------E 2592

Query: 59   GRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACG-------GPT 111
            GRPP   P    R   S+ SS    S   +       +   ++ ++ +          P 
Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA 2652

Query: 112  SAGHQRLGVRGRPLSAPP-------PPKPVREGKTPKSTDWA-VKEDECLPKSAPRGQVS 163
              G Q L     P   PP       P KP+   +  +S  ++ V+     P+ +PR Q S
Sbjct: 2653 KPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQS 2712

Query: 164  TQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRR 200
            +  + G+    R+ +   + +         P P P R
Sbjct: 2713 SSSERGS----RRGQRGDSRSPSHKRRRETPSPRPMR 2745


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 52/188 (27%), Positives = 70/188 (37%), Gaps = 31/188 (16%)

Query: 23   GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEK 82
            G P T  ++P    P P G       G    P +    PPA  P   P L+G   +   K
Sbjct: 1239 GAPTTPAATP----PSPKG-------GPATPPPKGAPTPPAATP---PSLKGGLATPPHK 1284

Query: 83   FSECFADKIDQMQARLPAAGAACAC--GGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTP 140
                 A     +    P  G A +   G PT         +G P + PP   P     TP
Sbjct: 1285 G----APNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP 1340

Query: 141  KSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAAS-KRGLSLSPPQP--G 197
             S     K    LP + P    S++  P TP+      P +A  S K G +++PP P  G
Sbjct: 1341 PSP----KGTPTLPATTP----SSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRG 1392

Query: 198  PRRPLFRG 205
            P  P  +G
Sbjct: 1393 PAIPSPKG 1400



 Score = 33.5 bits (75), Expect = 0.14
 Identities = 44/190 (23%), Positives = 66/190 (34%), Gaps = 12/190 (6%)

Query: 26   GTMRSSPEEPCPHPLGSRSEAYRGC-LHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFS 84
            G + + P +  P+P      + +G     P +    PPA  P       G+    G    
Sbjct: 1276 GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335

Query: 85   ECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGV--------RGRPLSAPPPPKPVRE 136
                    +    LPA   +   GGPT+   +            +G P   PP PK    
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSK-GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPA 1394

Query: 137  GKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAAS-KRGLSLSPPQ 195
              +PK    +       PK AP   V T+    TP++     P     S K+  + S P+
Sbjct: 1395 IPSPKGDPTSPAVIPLSPKKAPATPV-TREGAATPSKGDLTPPAVTPVSLKKAPATSAPK 1453

Query: 196  PGPRRPLFRG 205
             GP  P  +G
Sbjct: 1454 GGPATPSSKG 1463


>gi|239753407 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 22/124 (17%)

Query: 97  RLPAAGAACACGGPTSAGHQ---RLGVRG---RPLSAPPPPKPVREGKTPKSTDWAVKED 150
           R P A AA A GG T  G Q   R GV+G      SA  PP P     +  S+  +    
Sbjct: 2   RAPPATAATAAGGATGGGPQAARRSGVQGGQRNSTSARAPPPPPLAPSSSSSSGSSGSSG 61

Query: 151 ECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSL-------------SPPQPG 197
                SA +  + + +  G+ AR    R    A    G +L             SPPQPG
Sbjct: 62  GGGSGSAGQPTLGSMLAVGSAARRASERAGGRAG---GTALRAREPPPPLLPPPSPPQPG 118

Query: 198 PRRP 201
           P+ P
Sbjct: 119 PKGP 122


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 19/166 (11%)

Query: 42  SRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAA 101
           SR EA RGC H+  Q R R  AG+    P    S     ++        + +   R P  
Sbjct: 344 SRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP-- 401

Query: 102 GAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQ 161
                C  P+ AG  R G    P  AP PP     G+         ++ E  P++   G 
Sbjct: 402 ----PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRR--------QDPEPGPRAPRGGP 449

Query: 162 VSTQMQPGTPARL-----RKARPQSAAASKRGLSLSPPQPGPRRPL 202
            S+    G+ A         +R +  AA  RG   S       RPL
Sbjct: 450 ASSGWHAGSAAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPL 495


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 44/166 (26%), Positives = 60/166 (36%), Gaps = 19/166 (11%)

Query: 42  SRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAA 101
           SR EA RGC H+  Q R R  AG+    P    S     ++        + +   R P  
Sbjct: 344 SRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP-- 401

Query: 102 GAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQ 161
                C  P+ AG  R G    P  AP PP     G+         ++ E  P++   G 
Sbjct: 402 ----PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRR--------QDPEPGPRAPRGGP 449

Query: 162 VSTQMQPGTPARL-----RKARPQSAAASKRGLSLSPPQPGPRRPL 202
            S+    G+ A         +R +  AA  RG   S       RPL
Sbjct: 450 ASSGWHAGSAAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPL 495


>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
           sapiens]
          Length = 1038

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 40/150 (26%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 54  PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
           P Q R  PP  D   +P   G    S  + +E F   + Q   R   A A      P+  
Sbjct: 674 PEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIF-QALQQECMRQLQAPAGSPAPSPSPG 732

Query: 114 GHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG--TP 171
           G  +  V   P   P PP+P R                     AP G+  T   PG  +P
Sbjct: 733 GDDKPQV---PPRVPIPPRPTRP--------------HVQLSPAPPGEEETSQWPGPASP 775

Query: 172 ARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
            R+    P S   S+    L PP   P  P
Sbjct: 776 PRVPPREPLSPQGSRTPSPLVPPGSSPLPP 805


>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
           sapiens]
          Length = 1086

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 40/150 (26%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 54  PHQNRGRPPAGDPHCIPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSA 113
           P Q R  PP  D   +P   G    S  + +E F   + Q   R   A A      P+  
Sbjct: 752 PEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIF-QALQQECMRQLQAPAGSPAPSPSPG 810

Query: 114 GHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG--TP 171
           G  +  V   P   P PP+P R                     AP G+  T   PG  +P
Sbjct: 811 GDDKPQV---PPRVPIPPRPTRP--------------HVQLSPAPPGEEETSQWPGPASP 853

Query: 172 ARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
            R+    P S   S+    L PP   P  P
Sbjct: 854 PRVPPREPLSPQGSRTPSPLVPPGSSPLPP 883


>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
           sapiens]
          Length = 267

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 41/132 (31%), Positives = 53/132 (40%), Gaps = 17/132 (12%)

Query: 92  DQMQARLPAAGAACACGGPTSAGHQRLGV--RGRPLSAPPPPKPVREGKTPKSTDWAVKE 149
           D +     AA  A A G   +    R GV  R R  + PP P   R G +P      ++ 
Sbjct: 122 DTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP 181

Query: 150 DECL-PKSAPRGQVSTQMQP-----GTPARL--------RKARPQSAAASKRGLSLSPPQ 195
            +   P  A   QV  Q +P     G+ AR         RK  PQSA A    LS+   +
Sbjct: 182 RQIFAPLQAITNQVRPQQRPEPPPAGSAARSGRRAQRPGRKRSPQSAPAESGELSIDREE 241

Query: 196 PGPRR-PLFRGH 206
            GPR+ P   GH
Sbjct: 242 GGPRQAPQGAGH 253


>gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo
           sapiens]
          Length = 248

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 41/132 (31%), Positives = 53/132 (40%), Gaps = 17/132 (12%)

Query: 92  DQMQARLPAAGAACACGGPTSAGHQRLGV--RGRPLSAPPPPKPVREGKTPKSTDWAVKE 149
           D +     AA  A A G   +    R GV  R R  + PP P   R G +P      ++ 
Sbjct: 103 DTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPGGSPFGHRPLLQP 162

Query: 150 DECL-PKSAPRGQVSTQMQP-----GTPARL--------RKARPQSAAASKRGLSLSPPQ 195
            +   P  A   QV  Q +P     G+ AR         RK  PQSA A    LS+   +
Sbjct: 163 RQIFAPLQAITNQVRPQQRPEPPPAGSAARSGRRAQRPGRKRSPQSAPAESGELSIDREE 222

Query: 196 PGPRR-PLFRGH 206
            GPR+ P   GH
Sbjct: 223 GGPRQAPQGAGH 234


>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 3 [Homo sapiens]
          Length = 774

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 94  MQARLPAAGAA--CACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDE 151
           + A L  AG +     G P   G +RLG RGRPLSA  P  P R      S        E
Sbjct: 679 LHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQPSLPQR-ATGDGSPGRKGSGSE 737

Query: 152 CLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLS 192
            LP S    +     QP  P       P    A+ RGL LS
Sbjct: 738 RLPPSGLLAKPPRTAQPPRP-------PVPEPATPRGLQLS 771


>gi|223941923 OTU domain containing 1 [Homo sapiens]
          Length = 481

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 19/105 (18%)

Query: 99  PAAGAACACGGPTSAGHQRLGVRGRPL---SAPPPPKPVREGKTPKSTDWAVKEDECLPK 155
           P  GAA +   P          RGR L    AP  P P R G    S+ W ++E      
Sbjct: 131 PVPGAAGSAAAP----------RGRCLLLAPAPAAPVPPRRG----SSAWLLEELLRPDC 176

Query: 156 SAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSP--PQPGP 198
             P G  +T+  P    RL + R   AAA  RG + +P  P PGP
Sbjct: 177 PEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGP 221



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 26/96 (27%), Positives = 32/96 (33%), Gaps = 14/96 (14%)

Query: 115 HQRLGVRGRPLSAPPPPK---PVREGKTPKSTDWAVKEDE---CLPKSAPRGQVSTQMQP 168
           H   G  G   +AP PP    P +    P     A  E E   C P +A   + +  +  
Sbjct: 10  HYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREAAAVPA 69

Query: 169 GTPARLRK--------ARPQSAAASKRGLSLSPPQP 196
                           A P SAAA   G S  PP P
Sbjct: 70  AKMPAFSSCFEVVSGAAAPASAAAGPPGASCKPPLP 105


>gi|140972063 protein phosphatase 1, regulatory subunit 9B [Homo
           sapiens]
          Length = 817

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 69  IPRLRGSTCSSGEKFSECFADKIDQMQARLPAAGAACAC----GGPTSAG-----HQRLG 119
           + R  GST +  +  ++  +  + Q+ A    A +        G P +AG      + + 
Sbjct: 186 VVRFNGSTEALDKLDADAVSPTVSQLSAVFEKADSRTGLHRGPGLPRAAGVPQVNSKLVS 245

Query: 120 VRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARP 179
            R R    PPPP P   G  P     A KE     +  P+ +V+    P  P  +RK +P
Sbjct: 246 KRSRVFQPPPPPPPAPSGDAP-----AEKERCPAGQQPPQHRVAPARPPPKPREVRKIKP 300

Query: 180 QSAAASKRGLSLSPP 194
                S    + S P
Sbjct: 301 VEVEESGESEAESAP 315



 Score = 28.9 bits (63), Expect = 3.3
 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 113 AGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQM---QPG 169
           AG Q    R  P   PP P+ VR+ K  +  +    E E  P    + +V+         
Sbjct: 274 AGQQPPQHRVAPARPPPKPREVRKIKPVEVEESGESEAESAPGEVIQAEVTVHAALENGS 333

Query: 170 TPARLRKARPQ----SAAASKRGLSLSPPQPG 197
           T A      P+     AA  K   +++PP+ G
Sbjct: 334 TVATAASPAPEEPKAQAAPEKEAAAVAPPERG 365


>gi|61742808 hypothetical protein LOC283638 isoform 2 [Homo sapiens]
          Length = 1484

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 110  PTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG 169
            P + G  RLG R +P +  PPP P    +  +S+  + K  + L +S     +ST  +P 
Sbjct: 998  PEATGAGRLGSRRKPAA--PPPSPAAREEQSRSSASSQKGPQALTRS---NSLSTP-RPT 1051

Query: 170  TPARLRKAR-----PQSAAASKRGLSLSPPQP 196
              +RLR+AR        AA  +RG SL  P+P
Sbjct: 1052 RASRLRRARLGDASDTEAADGERG-SLGNPEP 1082


>gi|163644261 hypothetical protein LOC283638 isoform 1 [Homo sapiens]
          Length = 1554

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 110  PTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPG 169
            P + G  RLG R +P +  PPP P    +  +S+  + K  + L +S     +ST  +P 
Sbjct: 1068 PEATGAGRLGSRRKPAA--PPPSPAAREEQSRSSASSQKGPQALTRS---NSLSTP-RPT 1121

Query: 170  TPARLRKAR-----PQSAAASKRGLSLSPPQP 196
              +RLR+AR        AA  +RG SL  P+P
Sbjct: 1122 RASRLRRARLGDASDTEAADGERG-SLGNPEP 1152


>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
          Length = 1338

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 2/124 (1%)

Query: 88  ADKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKT-PKSTDWA 146
           A K    + R  + G   A  G  +AG + + V G PLS  P   P+    T        
Sbjct: 353 AAKCSSCRVRTASEGDGGAAAGAAAAGARPVSVAGSPLSPGPVRAPLSRSHTLSGGCGGR 412

Query: 147 VKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQS-AAASKRGLSLSPPQPGPRRPLFRG 205
             +   LP         +   P   +      P S +++S  G    PP PGP  PL   
Sbjct: 413 GSKVALLPAGGALQHSRSMSMPVAHSPPAATSPGSLSSSSGHGSGSYPPPPGPHPPLPHP 472

Query: 206 HQHG 209
             HG
Sbjct: 473 LHHG 476



 Score = 28.1 bits (61), Expect = 5.7
 Identities = 42/193 (21%), Positives = 65/193 (33%), Gaps = 24/193 (12%)

Query: 16   QLVNTANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGS 75
            + +N   G PG   S P  P      S S              G P            G+
Sbjct: 918  EYINIDFGEPGARLSPPAPPLLASAASSSSLLSASSPASSLGSGTP------------GT 965

Query: 76   TCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVR 135
            +  S ++        +D    + P  GA    G P  +     G+     S+P PP P R
Sbjct: 966  SSDSRQRSPLSDYMNLDFSSPKSPKPGAPS--GHPVGSLD---GLLSPEASSPYPPLPPR 1020

Query: 136  EGKTPKSTDWAVKEDEC---LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKR--GLS 190
               +P S+            L +  P   V+T   PG  + L      +   ++   G++
Sbjct: 1021 PSASPSSSLQPPPPPPAPGELYRLPPASAVATAQGPGAASSLSSDTGDNGDYTEMAFGVA 1080

Query: 191  LSPPQP--GPRRP 201
             +PPQP   P +P
Sbjct: 1081 ATPPQPIAAPPKP 1093


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 50/186 (26%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 23  GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGE- 81
           G P    + P+ P P P   +    +G  +KP   +G PP G P   P   GS   S   
Sbjct: 244 GPPPQGGNQPQGPPPPPGKPQGPPPQGG-NKP---QGPPPPGKPQGPPPQGGSKSRSSRS 299

Query: 82  ---KFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGK 138
              K         +Q Q   P  G     G P   G+       +P   PPP KP  +G 
Sbjct: 300 PPGKPQGPPPQGGNQPQGPPPPPGKPQ--GPPPQGGN-------KPQGPPPPGKP--QGP 348

Query: 139 TPK--STDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQP 196
            P+  S   + +     P+  P+ + +    P  PA     +PQ+  A +      PPQ 
Sbjct: 349 PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQG 408

Query: 197 G-PRRP 201
           G P RP
Sbjct: 409 GRPSRP 414


>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
          Length = 2365

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)

Query: 93  QMQARLP-------AAGA-ACACGGPTSAGHQRLGV-----RGRPLSAPPPPKPVREGKT 139
           +MQ+RLP       AAG+ A   GG T+A ++R        + +P+++PPPP P    K 
Sbjct: 189 EMQSRLPGPTARVSAAGSEAKTRGGSTTANNRRSQSFNNYDKSKPVTSPPPP-PSSHEKE 247

Query: 140 PKSTDWAVKE--DECLPKSAPRGQVSTQM---------QPGTPARLRKARPQSAAASKRG 188
           P ++  +      +  P S   G  ST           QPG   +  +++  S   S   
Sbjct: 248 PLASSASSHPGMSDNAPASLESGSSSTPTNCSTSSAIPQPGAATKPWRSKSLSVKHSATV 307

Query: 189 LSLSPPQPGPRRP 201
             LS   PGP  P
Sbjct: 308 SMLSVKPPGPEAP 320


>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
          Length = 2432

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)

Query: 93  QMQARLP-------AAGA-ACACGGPTSAGHQRLGV-----RGRPLSAPPPPKPVREGKT 139
           +MQ+RLP       AAG+ A   GG T+A ++R        + +P+++PPPP P    K 
Sbjct: 253 EMQSRLPGPTARVSAAGSEAKTRGGSTTANNRRSQSFNNYDKSKPVTSPPPP-PSSHEKE 311

Query: 140 PKSTDWAVKE--DECLPKSAPRGQVSTQM---------QPGTPARLRKARPQSAAASKRG 188
           P ++  +      +  P S   G  ST           QPG   +  +++  S   S   
Sbjct: 312 PLASSASSHPGMSDNAPASLESGSSSTPTNCSTSSAIPQPGAATKPWRSKSLSVKHSATV 371

Query: 189 LSLSPPQPGPRRP 201
             LS   PGP  P
Sbjct: 372 SMLSVKPPGPEAP 384


>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
          Length = 2429

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 25/133 (18%)

Query: 93  QMQARLP-------AAGA-ACACGGPTSAGHQRLGV-----RGRPLSAPPPPKPVREGKT 139
           +MQ+RLP       AAG+ A   GG T+A ++R        + +P+++PPPP P    K 
Sbjct: 253 EMQSRLPGPTARVSAAGSEAKTRGGSTTANNRRSQSFNNYDKSKPVTSPPPP-PSSHEKE 311

Query: 140 PKSTDWAVKE--DECLPKSAPRGQVSTQM---------QPGTPARLRKARPQSAAASKRG 188
           P ++  +      +  P S   G  ST           QPG   +  +++  S   S   
Sbjct: 312 PLASSASSHPGMSDNAPASLESGSSSTPTNCSTSSAIPQPGAATKPWRSKSLSVKHSATV 371

Query: 189 LSLSPPQPGPRRP 201
             LS   PGP  P
Sbjct: 372 SMLSVKPPGPEAP 384


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 44/149 (29%), Positives = 56/149 (37%), Gaps = 25/149 (16%)

Query: 63  AGDPHCIPR---LRGSTCSSGEKFSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLG 119
           AGDP+  P    L G+         +   D    +QA L  AGAA    GP +  H   G
Sbjct: 305 AGDPNEAPSPDTLLGALARRQLNLGQLLEDTESYLQAFL--AGAA----GPLNGDHPGPG 358

Query: 120 VRGRPLSAPPP-------PKPVREGKTPKSTD---WAVKEDECLPKSAPRGQVSTQMQPG 169
               P  APP        PK    G TP++      A  E +      P   +S  M  G
Sbjct: 359 QSSSPDQAPPQLSKSKGLPKSAWGGGTPEAHRPGFGATSEGQ-----GPLPFLSMFMGAG 413

Query: 170 -TPARLRKARPQSAAASKRGLSLSPPQPG 197
             P   R   P S++  K  L + PP PG
Sbjct: 414 DAPLGSRPGHPHSSSQVKSKLQIGPPSPG 442


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 122 GRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQS 181
           GR  +APP P P+   K P       +E    P    R     +  P  P       P +
Sbjct: 183 GRRANAPPTPLPMHSSKAPAYN----REKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVN 238

Query: 182 AAASKRGLSLSPPQPGPRRP 201
                 G SL+PP P  R+P
Sbjct: 239 IRTGPSGQSLAPPPPPYRQP 258



 Score = 30.8 bits (68), Expect = 0.88
 Identities = 32/98 (32%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 110 PTSAGHQRLGVRGRPLSAPPPP--KPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQ 167
           P S  + R G  G+ L+ PPPP  +P      P S       +E  P+   R     +  
Sbjct: 233 PPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSS-----PTNESAPELPQRHNSLHRKT 287

Query: 168 PGTPARLRKARPQSAAASKRGLSLSPPQPGPRRPLFRG 205
           PG    L    P SA+ S   LS  PP P  R P  RG
Sbjct: 288 PGPVRGLAPPPPTSASPSL--LSNRPPPPA-RDPPSRG 322



 Score = 28.1 bits (61), Expect = 5.7
 Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 10/93 (10%)

Query: 108 GGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQ 167
           G    AG   L +     +AP PP     G+    TD        LP+  PR Q     +
Sbjct: 103 GSENLAGKPALQIPSSRAAAPRPPVSAASGRPQDDTD---SSRASLPE-LPRMQ-----R 153

Query: 168 PGTPARLRKARPQSAAASKRGLSLSPPQPGPRR 200
           P  P  L +    S+   K   S  PP P  RR
Sbjct: 154 PSLP-DLSRPNTTSSTGMKHSSSAPPPPPPGRR 185



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 36/144 (25%), Positives = 47/144 (32%), Gaps = 32/144 (22%)

Query: 23  GRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSSGEK 82
           GR G     P +P P P+  R+      L  P      PP   P  +P   G +  + E 
Sbjct: 220 GREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPP-----PPYRQPPGVPN--GPSSPTNES 272

Query: 83  FSECFADKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLS---------------- 126
             E    + + +  + P      A   PTSA    L  R  P +                
Sbjct: 273 APE-LPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPPPPPV 331

Query: 127 -------APPPPKPVR-EGKTPKS 142
                  APPPP P R  G  P S
Sbjct: 332 IRNGARDAPPPPPPYRMHGSEPPS 355


>gi|67089160 promyelocytic leukemia protein isoform 11 [Homo
           sapiens]
          Length = 781

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 11/118 (9%)

Query: 89  DKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVK 148
           D  D+ + RL    ++C   G  +A    +  +  P +A  P  P+       +T  A K
Sbjct: 374 DGFDEFKVRLQDL-SSCITQGKDAA----VSKKASPEAASTPRDPIDVDLDVSNTTTAQK 428

Query: 149 EDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQ----PGPRRPL 202
             +C     PR  +  + + G  ARL ++ P+    S    ++SPP     P PR P+
Sbjct: 429 R-KCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPS-TSKAVSPPHLDGPPSPRSPV 484


>gi|15451779 promyelocytic leukemia protein isoform 10 [Homo
           sapiens]
          Length = 585

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 11/118 (9%)

Query: 89  DKIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKPVREGKTPKSTDWAVK 148
           D  D+ + RL    ++C   G  +A    +  +  P +A  P  P+       +T  A K
Sbjct: 374 DGFDEFKVRLQDL-SSCITQGKDAA----VSKKASPEAASTPRDPIDVDLDVSNTTTAQK 428

Query: 149 EDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQ----PGPRRPL 202
             +C     PR  +  + + G  ARL ++ P+    S    ++SPP     P PR P+
Sbjct: 429 R-KCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPS-TSKAVSPPHLDGPPSPRSPV 484


>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 46/175 (26%), Positives = 60/175 (34%), Gaps = 33/175 (18%)

Query: 20  TANGRPGTMRSSPEEPCPHPLGSRSEAYRGCLHKPHQNRGRPPAGDPHCIPRLRGSTCSS 79
           T   RPGT+R+      P P  +R +     L +P   R    A  PH    L GS    
Sbjct: 57  TLRPRPGTLRAPGNAESPAPRRARPD-----LGRPWATRS---AASPHSKMWL-GSHLRG 107

Query: 80  GEKFSECFAD------KIDQMQARLPAAGAACACGGPTSAGHQRLGVRGRPLSAPPPPKP 133
           GE   +   D      +    +  LPA  A      P  A          PLS P PP+P
Sbjct: 108 GEMSGDPHTDLPAHPAQTTNPELELPADPAQ-----PDPA----------PLSRPAPPRP 152

Query: 134 VREGKTPKSTDWAVKEDECLPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRG 188
             +    +    A       P++ P G+   Q  P    R        A AS RG
Sbjct: 153 AHQSPAEEGPRGAAGGG---PRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRG 204


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 23/109 (21%)

Query: 96  ARLPAAGAACACGGPTSAGHQRLGVRGR---PLSAPPPPKPVREGKTPKSTDWAVKEDEC 152
           AR P A AA A   P S G  + G R +   PL+APPP         P +          
Sbjct: 146 ARAPRAAAAAATA-PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG--------- 195

Query: 153 LPKSAPRGQVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
            P+ AP   V+ +  P  P     A PQ            PP P P+ P
Sbjct: 196 -PRRAPPPAVAAREPPLPPPPQPPAPPQQQ---------QPPPPQPQPP 234



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 12/75 (16%)

Query: 132 KPVREGKTPKSTDWAVKEDECLPKSAPRGQVS-----TQMQPGTPARLRKARPQSAAASK 186
           +P R G TP +   A       P+ AP    +     T   P  PA +  A P  A  + 
Sbjct: 100 QPPRRGATPPAPPRA-------PRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAA 152

Query: 187 RGLSLSPPQPGPRRP 201
              + +PP PGP +P
Sbjct: 153 AAAATAPPSPGPAQP 167


>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
           sapiens]
          Length = 528

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 19/101 (18%)

Query: 105 CACGGPTSAGHQRLG-VRGRPLSAPPP---PKPVREGKTPKSTDWAVKEDECLPKSAPRG 160
           C+ G P + G +  G  R R   APPP   P P    +TP  T            + PR 
Sbjct: 236 CSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGT------------AGPRS 283

Query: 161 QVSTQMQPGTPARLRKARPQSAAASKRGLSLSPPQPGPRRP 201
             S     G P      R +   AS      + P PGP RP
Sbjct: 284 PASGPDARGAPT---PGRARGGGASWSATPTTIPGPGPPRP 321


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,979,136
Number of Sequences: 37866
Number of extensions: 747230
Number of successful extensions: 4105
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 423
Number of HSP's that attempted gapping in prelim test: 3698
Number of HSP's gapped (non-prelim): 852
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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