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Search of human proteins with 239747737
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747737 PREDICTED: similar to hCG1644578 [Homo sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747737 PREDICTED: similar to hCG1644578 [Homo sapiens] 327 4e-90
gi|10047102 ribosomal protein L24-like [Homo sapiens] 282 8e-77
gi|169213020 PREDICTED: similar to ribosomal protein L24-like [H... 239 6e-64
gi|89047474 PREDICTED: similar to ribosomal protein L24-like [Ho... 239 6e-64
gi|27485363 PREDICTED: similar to ribosomal protein L24-like [Ho... 239 6e-64
gi|169164029 PREDICTED: similar to hCG1644578 [Homo sapiens] 165 2e-41
gi|169163248 PREDICTED: similar to hCG1644578 [Homo sapiens] 165 2e-41
gi|4506619 ribosomal protein L24 [Homo sapiens] 63 1e-10
gi|12083581 phosphoinositide-specific phospholipase C beta 1 iso... 35 0.028
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 34 0.062
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 34 0.062
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 34 0.062
gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a... 33 0.081
gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b... 33 0.081
gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo sapi... 33 0.11
gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... 33 0.11
gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... 33 0.11
gi|33356544 phosphoinositide-specific phospholipase C beta 1 iso... 32 0.18
gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2 ... 32 0.18
gi|21389509 KPL2 protein isoform 2 [Homo sapiens] 31 0.40
gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 31 0.40
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 31 0.40
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 31 0.53
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 31 0.53
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 31 0.53
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 30 0.69
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 30 0.90
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 30 1.2
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 30 1.2
gi|4758072 cryptochrome 1 (photolyase-like) [Homo sapiens] 30 1.2
>gi|239747737 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 161
Score = 327 bits (837), Expect = 4e-90
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
KELTVDNSFEFEKRRNEPIKYQ ELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
Query: 121 LXKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDAS 161
L KEVKQNIHLILAPLAGKGKQL EKMVQQLQEDVDMEDAS
Sbjct: 121 LXKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDAS 161
>gi|10047102 ribosomal protein L24-like [Homo sapiens]
Length = 163
Score = 282 bits (722), Expect = 8e-77
Identities = 140/162 (86%), Positives = 147/162 (90%), Gaps = 2/162 (1%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
M IEKCYFCSG IYPGH MMFV+N+CKVFRFC SK HKNFKKKRNPRKV WTKAF KAA
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
KELTVDNSFEFEKRRNEPIKYQ ELWNKTI+A+KRVEEIKQKRQAKF++NRLKKNK LQK
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
Query: 121 L--XKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDA 160
+ KEVKQNIHLI APLAGKGKQL EKMVQQLQEDVDMEDA
Sbjct: 121 VQDIKEVKQNIHLIRAPLAGKGKQLEEKMVQQLQEDVDMEDA 162
>gi|169213020 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 239 bits (611), Expect = 6e-64
Identities = 120/160 (75%), Positives = 135/160 (84%), Gaps = 2/160 (1%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
M IEKCYFCSG IYPG+ M+F+ N+CKVF FC SK HK+FKKK NPRKV TK F KAA
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
KELTVDNSFEF+K RNE IKYQ ELWNKTI+A+KRVEEIKQK QAKF++NRLKKNK LQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 L--XKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDME 158
+ KEVKQ+IHL A LAGKGK+L EKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|89047474 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 239 bits (611), Expect = 6e-64
Identities = 120/160 (75%), Positives = 135/160 (84%), Gaps = 2/160 (1%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
M IEKCYFCSG IYPG+ M+F+ N+CKVF FC SK HK+FKKK NPRKV TK F KAA
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
KELTVDNSFEF+K RNE IKYQ ELWNKTI+A+KRVEEIKQK QAKF++NRLKKNK LQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 L--XKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDME 158
+ KEVKQ+IHL A LAGKGK+L EKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|27485363 PREDICTED: similar to ribosomal protein L24-like [Homo
sapiens]
Length = 187
Score = 239 bits (611), Expect = 6e-64
Identities = 120/160 (75%), Positives = 135/160 (84%), Gaps = 2/160 (1%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
M IEKCYFCSG IYPG+ M+F+ N+CKVF FC SK HK+FKKK NPRKV TK F KAA
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQK 120
KELTVDNSFEF+K RNE IKYQ ELWNKTI+A+KRVEEIKQK QAKF++NRLKKNK LQK
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 L--XKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDME 158
+ KEVKQ+IHL A LAGKGK+L EKMVQQLQ+DVDM+
Sbjct: 121 VQDIKEVKQSIHLTQARLAGKGKELEEKMVQQLQQDVDMK 160
>gi|169164029 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 184
Score = 165 bits (417), Expect = 2e-41
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEK 73
KELTVDNSFEFEK
Sbjct: 61 KELTVDNSFEFEK 73
>gi|169163248 PREDICTED: similar to hCG1644578 [Homo sapiens]
Length = 184
Score = 165 bits (417), Expect = 2e-41
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELTVDNSFEFEK 73
KELTVDNSFEFEK
Sbjct: 61 KELTVDNSFEFEK 73
>gi|4506619 ribosomal protein L24 [Homo sapiens]
Length = 157
Score = 62.8 bits (151), Expect = 1e-10
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
M +E C F IYPGH + + + KVF+F N+K F KRNPR++ WT + +
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KELTVDNSFEFEKRR-NEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQ 119
K S E +K+R +K+Q + ++ +I KR K V + ++ +A++
Sbjct: 61 K----GQSEEIQKKRTRRAVKFQRAITGASL------ADIMAKRNQKPEVRKAQREQAIR 110
Query: 120 --KLXKEVKQ 127
K K+ KQ
Sbjct: 111 AAKEAKKAKQ 120
>gi|12083581 phosphoinositide-specific phospholipase C beta 1 isoform
a [Homo sapiens]
Length = 1216
Score = 35.0 bits (79), Expect = 0.028
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 17 HSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRN 76
H + +Q V C + K K+ K K K +++T S + +
Sbjct: 1034 HIKLLIQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEE 1093
Query: 77 EPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQKLXKEVKQNIHLIL-AP 135
E + + ++ IKR+EE + KRQ K V +K+K +++ + K + + L
Sbjct: 1094 EKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLV----EKHKEIRQQILDEKPKLQVELEQE 1149
Query: 136 LAGKGKQLXEKMVQQLQE 153
K K+L ++++ +QE
Sbjct: 1150 YQDKFKRLPLEILEFVQE 1167
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 33.9 bits (76), Expect = 0.062
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 41 KKKRNPRKVGWTKAFWKAADKELTVDN---SFEFEKRRNEPIKYQXELWNKTIEAIKRVE 97
+++ RK K W+ +EL E EKR + + + + + + I+R E
Sbjct: 389 QQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIERRE 448
Query: 98 EIKQK--RQAKFVVNRLKKNKALQKLXKEV---------KQNIHLILAPLAGKGKQLXEK 146
KQ+ RQ + R+++ + L + +E K+N+HL L L GK +Q+ +
Sbjct: 449 AAKQELERQRRLEWERIRRQELLNQKNREQEEIVRLNSKKKNLHLELEALNGKHQQISGR 508
Query: 147 M 147
+
Sbjct: 509 L 509
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 33.9 bits (76), Expect = 0.062
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 41 KKKRNPRKVGWTKAFWKAADKELTVDN---SFEFEKRRNEPIKYQXELWNKTIEAIKRVE 97
+++ RK K W+ +EL E EKR + + + + + + I+R E
Sbjct: 389 QQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIERRE 448
Query: 98 EIKQK--RQAKFVVNRLKKNKALQKLXKEV---------KQNIHLILAPLAGKGKQLXEK 146
KQ+ RQ + R+++ + L + +E K+N+HL L L GK +Q+ +
Sbjct: 449 AAKQELERQRRLEWERIRRQELLNQKNREQEEIVRLNSKKKNLHLELEALNGKHQQISGR 508
Query: 147 M 147
+
Sbjct: 509 L 509
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 33.9 bits (76), Expect = 0.062
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 41 KKKRNPRKVGWTKAFWKAADKELTVDN---SFEFEKRRNEPIKYQXELWNKTIEAIKRVE 97
+++ RK K W+ +EL E EKR + + + + + + I+R E
Sbjct: 389 QQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKDIERRE 448
Query: 98 EIKQK--RQAKFVVNRLKKNKALQKLXKEV---------KQNIHLILAPLAGKGKQLXEK 146
KQ+ RQ + R+++ + L + +E K+N+HL L L GK +Q+ +
Sbjct: 449 AAKQELERQRRLEWERIRRQELLNQKNREQEEIVRLNSKKKNLHLELEALNGKHQQISGR 508
Query: 147 M 147
+
Sbjct: 509 L 509
>gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a
[Homo sapiens]
Length = 1071
Score = 33.5 bits (75), Expect = 0.081
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 92 AIKRVEEIKQKRQAKFVVNRLKKNKA 117
++K++E++K+KRQAK+ N+LK KA
Sbjct: 224 SVKKIEKMKEKRQAKYTENKLKAIKA 249
>gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b
[Homo sapiens]
Length = 836
Score = 33.5 bits (75), Expect = 0.081
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 92 AIKRVEEIKQKRQAKFVVNRLKKNKA 117
++K++E++K+KRQAK+ N+LK KA
Sbjct: 224 SVKKIEKMKEKRQAKYTENKLKAIKA 249
>gi|44917604 SLIT-ROBO Rho GTPase activating protein 1 [Homo
sapiens]
Length = 1085
Score = 33.1 bits (74), Expect = 0.11
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 92 AIKRVEEIKQKRQAKFVVNRLKKNKA 117
++K++E++K+KRQAK+ N+LK KA
Sbjct: 214 SVKKIEKMKEKRQAKYSENKLKSIKA 239
>gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b
[Homo sapiens]
Length = 1075
Score = 33.1 bits (74), Expect = 0.11
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 92 AIKRVEEIKQKRQAKFVVNRLKKNKA 117
++K++E++K+KRQAK+ N+LK KA
Sbjct: 214 SVKKIEKMKEKRQAKYSENKLKCTKA 239
>gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a
[Homo sapiens]
Length = 1099
Score = 33.1 bits (74), Expect = 0.11
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 92 AIKRVEEIKQKRQAKFVVNRLKKNKA 117
++K++E++K+KRQAK+ N+LK KA
Sbjct: 214 SVKKIEKMKEKRQAKYSENKLKCTKA 239
>gi|33356544 phosphoinositide-specific phospholipase C beta 1 isoform
b [Homo sapiens]
Length = 1173
Score = 32.3 bits (72), Expect = 0.18
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 17 HSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRN 76
H + +Q V C + K K+ K K K +++T S + +
Sbjct: 1034 HIKLLIQKLTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEE 1093
Query: 77 EPIKYQXELWNKTIEAIKRVEEIKQKRQAKFV 108
E + + ++ IKR+EE + KRQ K V
Sbjct: 1094 EKTEMIRSYIQEVVQYIKRLEEAQSKRQEKLV 1125
>gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2
[Homo sapiens]
Length = 1235
Score = 32.3 bits (72), Expect = 0.18
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 37 HKNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRN-------EPIKYQXELWNKT 89
+K K++ + T+ K ++ T + FEKRR+ + IK Q E K
Sbjct: 375 YKELKEQVRKKVATMTQQLEKLQWEQKTDEERLAFEKRRHGEVQGNLKQIKEQIEDHKKR 434
Query: 90 IEAIKRVEEI------KQKRQAKFVVNRLKKNKALQKLXKEVKQNIHLILAPLAGKGKQL 143
IE ++ + ++K+Q + +V+ ++K K+ E + ++LI + L G
Sbjct: 435 IEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRM---SEFNEELNLIRSELQNAGIDT 491
Query: 144 XEKMVQQLQEDV 155
E QQ + +V
Sbjct: 492 HEGKRQQKRAEV 503
>gi|21389509 KPL2 protein isoform 2 [Homo sapiens]
Length = 514
Score = 31.2 bits (69), Expect = 0.40
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 87 NKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQKLXKEVKQNIHLILAPLAGK------- 139
N+T++A++ + +K+K++A+ V + +KK +AL K + K++ AG+
Sbjct: 223 NRTLKALEAQKMMKKKKEAEDVADEIKKFEALIKKDLQAKESASKTSLDTAGQTTTDLLN 282
Query: 140 ---GKQLXEKMVQQLQED 154
+ +K+ ++L+ED
Sbjct: 283 TYSDDEYIKKIQKRLEED 300
>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
Length = 1822
Score = 31.2 bits (69), Expect = 0.40
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 87 NKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQKLXKEVKQNIHLILAPLAGK------- 139
N+T++A++ + +K+K++A+ V + +KK +AL K + K++ AG+
Sbjct: 223 NRTLKALEAQKMMKKKKEAEDVADEIKKFEALIKKDLQAKESASKTSLDTAGQTTTDLLN 282
Query: 140 ---GKQLXEKMVQQLQED 154
+ +K+ ++L+ED
Sbjct: 283 TYSDDEYIKKIQKRLEED 300
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 31.2 bits (69), Expect = 0.40
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 38 KNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVE 97
K K + +K+ W K + +L + E E++RN + L+NK E ++ E
Sbjct: 681 KKTKLQLELQKIEWEKELY-----DLRLALKQENEEKRNADM-----LYNKDSEQLRIKE 730
Query: 98 E-----IKQKRQAKFVVNRLKKNKALQKLXKEVKQNIHLILAPLAGKGKQLXEKMVQQLQ 152
E ++ K+Q K+ + RL K + V+ N+ L++ KQL E+ ++
Sbjct: 731 EECGKVVETKQQLKWNLRRLVKE------LRTVRNNLDLVVQERNDAQKQLSEEQDARIL 784
Query: 153 ED 154
+D
Sbjct: 785 QD 786
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 30.8 bits (68), Expect = 0.53
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 59 ADKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKN--- 115
A + V+NS + + E K +A EE+K+++ + R+KKN
Sbjct: 1739 AQCQAEVENSIQESRNAEEKAK------KAITDAAMMAEELKKEQDTSAHLERMKKNLEQ 1792
Query: 116 --KALQKLXKEVKQNIHLILAPLAGKGK-QLXEKMVQQLQEDVDME 158
K LQ E +Q LA GK + Q E V++L+ ++D+E
Sbjct: 1793 TVKDLQHRLDEAEQ-----LALKGGKKQIQKLENRVRELENELDVE 1833
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 30.8 bits (68), Expect = 0.53
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 56 WKAADKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQK--RQAKFVVNRLK 113
+K D ++ D + K R E I + + +E EE KQ+ R+ + VVN+LK
Sbjct: 715 FKKRDAQVIADMEAQVHKLREELINVNSQRKQQLVELGLLREEEKQRATREHEIVVNKLK 774
Query: 114 KNKALQK--LXKEVKQNIHLILAPLAGKGKQLXEKMVQQL 151
K L K + L K KQ+ ++ Q+L
Sbjct: 775 AESEKMKIELKKTHAAETEMTLEKANSKLKQIEKEYTQKL 814
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 30.8 bits (68), Expect = 0.53
Identities = 21/111 (18%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 22 VQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRNEPIKY 81
++N +V CN+ Y ++FKK K + +++ VD + +++R+ ++
Sbjct: 695 LENTLQVLNSCNNNYKQSFKKVTPSSDEYELKI--QLEEQKRAVDEKYRYKQRQIRELQE 752
Query: 82 QXELWNKTIEAIKRV-----EEIKQKRQAKFVVNRLKKNKALQKLXKEVKQ 127
+ T++ I+ + E++ +K+ F +++ + + KL + KQ
Sbjct: 753 DIQSMENTLDVIEHLANNVKEKLSEKQAYSFQLSK-ETEEQKPKLERVTKQ 802
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 30.4 bits (67), Expect = 0.69
Identities = 25/91 (27%), Positives = 35/91 (38%)
Query: 38 KNFKKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVE 97
K +KK+ +K K K K T + K+R K K E K E
Sbjct: 24 KRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKE 83
Query: 98 EIKQKRQAKFVVNRLKKNKALQKLXKEVKQN 128
+ K+K + K KK K +K K+ K N
Sbjct: 84 KEKEKEKEKEKEKEKKKKKKKKKKKKKKKLN 114
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 30.0 bits (66), Expect = 0.90
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 41 KKKRNPRKVGWTKAFWKAADKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIK 100
++K +K G +KA KA + L E ++R E E IKR+EE++
Sbjct: 326 EEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEE------------ERIKRLEELE 373
Query: 101 QKRQAKFVVNRLKKNKALQKLXKEVKQNI 129
KR+ + + + K+ + QK KE K+ +
Sbjct: 374 AKRKEEERLEQEKRERKKQK-EKERKERL 401
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 29.6 bits (65), Expect = 1.2
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 60 DKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQ 119
D EL+ + EK + KY+ + N + K V +Q R+ +K++A+Q
Sbjct: 1184 DSELSALERQKDEKITQQEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQ 1243
Query: 120 KLXKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDAS 161
KE K ++ L K K L ++ + D D+S
Sbjct: 1244 TALKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSS 1285
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 29.6 bits (65), Expect = 1.2
Identities = 25/102 (24%), Positives = 43/102 (42%)
Query: 60 DKELTVDNSFEFEKRRNEPIKYQXELWNKTIEAIKRVEEIKQKRQAKFVVNRLKKNKALQ 119
D EL+ + EK + KY+ + N + K V +Q R+ +K++A+Q
Sbjct: 1184 DSELSALERQKDEKITQQEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQ 1243
Query: 120 KLXKEVKQNIHLILAPLAGKGKQLXEKMVQQLQEDVDMEDAS 161
KE K ++ L K K L ++ + D D+S
Sbjct: 1244 TALKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSS 1285
>gi|4758072 cryptochrome 1 (photolyase-like) [Homo sapiens]
Length = 586
Score = 29.6 bits (65), Expect = 1.2
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 25 NCKVFRFCNSKYHKNFKKKRNP-----RKVGWTKAFWKAADKELTVDNSFEFEKRRNEPI 79
+C++F F + +K KK +P ++ W + F+ AA N+ F+K PI
Sbjct: 261 SCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAA------TNNPRFDKMEGNPI 314
Query: 80 KYQXELWNKTIEAIKRVEE 98
Q W+K EA+ + E
Sbjct: 315 CVQIP-WDKNPEALAKWAE 332
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,659,606
Number of Sequences: 37866
Number of extensions: 216867
Number of successful extensions: 879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 123
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.