Guide to the Human Genome
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Name: LOC284288 Sequence: fasta or formatted (187aa) NCBI GI: 169213020
Description:

PREDICTED: similar to ribosomal protein L24-like

Referenced in:

Ribosomes

Other entries for this name:
alt mRNA [187aa] PREDICTED: similar to ribosomal protein L24-like
alt mRNA [187aa] PREDICTED: similar to ribosomal protein L24-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          6           2
 C cysteine            3.7          7           1
 D aspartate           4.8          9           1
 E glutamate           7.0         13           2
 F phenylalanine       6.4         12           1
 G glycine             4.3          8           1
 H histidine           4.8          9           1
 I isoleucine          4.8          9           1
 K lysine             16.6         31           3
 L leucine             9.1         17           2
 M methionine          4.3          8           1
 N asparagine          4.8          9           1
 P proline             2.7          5           1
 Q glutamine           6.4         12           2
 R arginine            4.8          9           2
 S serine              2.1          4           1
 T threonine           2.1          4           1
 V valine              4.3          8           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to ribosomal protein L24-like [H... 
LOC284288             1.000   PREDICTED: similar to ribosomal protein L24-like [Ho...
LOC284288             1.000   PREDICTED: similar to ribosomal protein L24-like [Ho...
RSL24D1               0.705   ribosomal protein L24-like 
LOC100129162          0.580   PREDICTED: similar to hCG1644578 
LOC100129162          0.260   PREDICTED: similar to hCG1644578 
LOC100129162          0.255   PREDICTED: similar to hCG1644578 
RPL24                 0.081   ribosomal protein L24 
HOOK1                 0.035   hook homolog 1 
PLCB1                 0.030   phosphoinositide-specific phospholipase C beta 1 iso...
ANKRD12               0.030   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.030   ankyrin repeat domain 12 isoform 1 
KIF21A                0.027   kinesin family member 21A 
CCDC7                 0.027   coiled-coil domain containing 7 
CCDC7                 0.027   coiled-coil domain containing 7 
RBM26                 0.027   RNA binding motif protein 26 
EPS15                 0.024   epidermal growth factor receptor pathway substrate 15...
PLCB1                 0.024   phosphoinositide-specific phospholipase C beta 1 iso...
LRRFIP2               0.024   leucine rich repeat (in FLII) interacting protein 2 i...
IFT74                 0.024   coiled-coil domain containing 2 isoform a 
IFT74                 0.024   coiled-coil domain containing 2 isoform a 
IFT74                 0.024   coiled-coil domain containing 2 isoform a 
MYH13                 0.022   myosin, heavy polypeptide 13, skeletal muscle [Homo...
NDEL1                 0.022   nudE nuclear distribution gene E homolog (A. nidulan...
NDEL1                 0.022   nudE nuclear distribution gene E homolog (A. nidulan...
SLK                   0.022   serine/threonine kinase 2 
CCDC146               0.022   coiled-coil domain containing 146 
BAIAP2L1              0.022   BAI1-associated protein 2-like 1 
CCDC46                0.022   coiled-coil domain containing 46 isoform a 
BAT2D1                0.022   HBxAg transactivated protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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