Guide to the Human Genome
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Name: LOC729660 Sequence: fasta or formatted (161aa) NCBI GI: 239741512
Description:

PREDICTED: similar to Putative uncharacterized protein FLJ44672

Not currently referenced in the text

Other entries for this name:
alt prot {237aa} PREDICTED: similar to Putative uncharacterized protein FLJ44672
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         22           2
 C cysteine            1.2          2           1
 D aspartate           0.6          1           1
 E glutamate           1.9          3           2
 F phenylalanine       1.9          3           1
 G glycine            11.2         18           2
 H histidine           0.6          1           1
 I isoleucine          0.0          0           0
 K lysine              1.2          2           1
 L leucine            15.5         25           2
 M methionine          1.2          2           1
 N asparagine          0.6          1           1
 P proline            13.7         22           1
 Q glutamine           6.2         10           2
 R arginine            8.7         14           2
 S serine             13.7         22           3
 T threonine           3.1          5           2
 V valine              5.0          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Putative uncharacterized prot... 
LOC729660             0.541   PREDICTED: similar to Putative uncharacterized prot...
LOC731275             0.455   PREDICTED: similar to Putative uncharacterized prot...
LOC100287930          0.334   PREDICTED: similar to Putative uncharacterized prot...
LOC100287930          0.328   PREDICTED: hypothetical protein XP_002342772 
LOC100287930          0.328   PREDICTED: similar to Putative uncharacterized prot...
LOC731275             0.076   PREDICTED: hypothetical protein 
LOC100288360          0.076   PREDICTED: hypothetical protein XP_002342802 
LOC100287093          0.076   PREDICTED: hypothetical protein XP_002342765 
LOC100288360          0.076   PREDICTED: similar to Putative uncharacterized prot...
LOC100287093          0.076   PREDICTED: similar to Putative uncharacterized prot...
LOC100290352          0.072   PREDICTED: hypothetical protein XP_002347695, parti...
LOC100288155          0.072   PREDICTED: hypothetical protein XP_002342801, parti...
LOC100287258          0.072   PREDICTED: hypothetical protein XP_002342766 
LOC100288155          0.072   PREDICTED: hypothetical protein, partial 
LOC100287258          0.072   PREDICTED: hypothetical protein 
LOC100293878          0.066   PREDICTED: similar to hCG1779533 
LOC100133331          0.059   PREDICTED: hypothetical protein 
LOC100292470          0.052   PREDICTED: similar to hCG1779533 
LOC100128326          0.052   PREDICTED: hypothetical protein 
LOC100128326          0.052   PREDICTED: hypothetical protein 
LOC100128326          0.052   PREDICTED: hypothetical protein 
LOC730826             0.048   PREDICTED: hypothetical protein 
LOC645321             0.048   PREDICTED: hypothetical protein 
LOC100131871          0.048   PREDICTED: similar to hCG1779533 
LOC100131871          0.048   PREDICTED: similar to hCG1779533 
LOC100131871          0.048   PREDICTED: similar to hCG1779533 
LOC100132062          0.048   PREDICTED: hypothetical protein 
SRCAP                 0.048   Snf2-related CBP activator protein 
LOC100134105          0.048   PREDICTED: similar to hCG1793472 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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