Guide to the Human Genome
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Name: LOC731275 Sequence: fasta or formatted (390aa) NCBI GI: 239741514
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {259aa} PREDICTED: similar to Putative uncharacterized protein FLJ44672
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         39           1
 C cysteine            2.6         10           2
 D aspartate           1.3          5           1
 E glutamate           0.5          2           1
 F phenylalanine       3.3         13           2
 G glycine             5.6         22           2
 H histidine           2.8         11           1
 I isoleucine          1.0          4           1
 K lysine              1.8          7           1
 L leucine            13.1         51           2
 M methionine          1.5          6           1
 N asparagine          1.3          5           1
 P proline            17.2         67           2
 Q glutamine           8.2         32           2
 R arginine            6.4         25           2
 S serine             13.6         53           2
 T threonine           3.3         13           2
 V valine              3.1         12           2
 W tryptophan          2.3          9           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132062          0.889   PREDICTED: hypothetical protein 
LOC100132287          0.886   PREDICTED: hypothetical protein 
LOC100133161          0.880   PREDICTED: hypothetical protein 
LOC100132062          0.872   PREDICTED: hypothetical protein 
LOC100133331          0.297   PREDICTED: hypothetical protein 
LOC100128326          0.292   PREDICTED: hypothetical protein 
LOC100128326          0.292   PREDICTED: hypothetical protein 
LOC100128326          0.287   PREDICTED: hypothetical protein 
LOC728417             0.263   PREDICTED: hypothetical protein 
LOC728417             0.263   PREDICTED: hypothetical protein 
LOC728417             0.263   PREDICTED: hypothetical protein isoform 1 
LOC730826             0.261   PREDICTED: hypothetical protein 
LOC100288155          0.248   PREDICTED: hypothetical protein XP_002342801, parti...
LOC100288155          0.248   PREDICTED: hypothetical protein, partial 
LOC100287258          0.247   PREDICTED: hypothetical protein XP_002342766 
LOC100287258          0.247   PREDICTED: hypothetical protein 
LOC100290352          0.234   PREDICTED: hypothetical protein XP_002347695, parti...
LOC100294359          0.200   PREDICTED: hypothetical protein 
LOC728417             0.196   PREDICTED: hypothetical protein isoform 2 
LOC100129904          0.176   PREDICTED: hypothetical protein 
LOC100129904          0.176   PREDICTED: hypothetical protein 
LOC100129904          0.176   PREDICTED: hypothetical protein 
LOC100129904          0.176   PREDICTED: hypothetical protein 
LOC729737             0.146   PREDICTED: hypothetical protein 
LOC100132050          0.072   PREDICTED: similar to hCG1779533 
LOC100132050          0.072   PREDICTED: similar to hCG1779533 
LOC100292470          0.070   PREDICTED: similar to hCG1779533 
LOC100287093          0.068   PREDICTED: hypothetical protein XP_002342765 
LOC100287093          0.068   PREDICTED: similar to Putative uncharacterized prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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