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Search of human proteins with 239747357
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo
sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo ... 413 e-116
gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo ... 285 2e-77
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens] 37 0.015
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 36 0.026
gi|239509017 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.058
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 34 0.099
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 34 0.099
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 33 0.13
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 33 0.13
gi|239757813 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|239757528 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|89060771 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|239752044 PREDICTED: hypothetical protein XP_002348074 [Homo ... 33 0.17
gi|51477177 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|239746528 PREDICTED: hypothetical protein XP_002343752 [Homo ... 33 0.17
gi|110611239 alpha-L-iduronidase precursor [Homo sapiens] 33 0.22
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo ... 33 0.22
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 33 0.22
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 33 0.22
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 33 0.22
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 33 0.22
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [... 33 0.22
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 33 0.22
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 33 0.22
gi|239756672 PREDICTED: hypothetical protein LOC146429 [Homo sap... 32 0.29
gi|239751156 PREDICTED: hypothetical protein LOC146429 isoform 6... 32 0.29
>gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo
sapiens]
Length = 205
Score = 413 bits (1062), Expect = e-116
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MIRREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGV 60
MIRREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGV
Sbjct: 1 MIRREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGV 60
Query: 61 GGRTGTGREEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRK 120
GGRTGTGREEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRK
Sbjct: 61 GGRTGTGREEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRK 120
Query: 121 TTPVLIPALKERNGSEVISDFSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKK 180
TTPVLIPALKERNGSEVISDFSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKK
Sbjct: 121 TTPVLIPALKERNGSEVISDFSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKK 180
Query: 181 QRDDATEVSGKLRLIKGSLLDLQAL 205
QRDDATEVSGKLRLIKGSLLDLQAL
Sbjct: 181 QRDDATEVSGKLRLIKGSLLDLQAL 205
>gi|239741182 PREDICTED: hypothetical protein XP_002342129 [Homo
sapiens]
Length = 211
Score = 285 bits (728), Expect = 2e-77
Identities = 152/185 (82%), Positives = 154/185 (83%), Gaps = 11/185 (5%)
Query: 22 GEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREE-GSVFRKGEGT 80
G K G P + RR GE RA+P R G G T GR GSVFRKGEGT
Sbjct: 37 GGREKRGRPESPRRRRSGE-RASPARRR---------GPGATTRPGRWSLGSVFRKGEGT 86
Query: 81 WRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPALKERNGSEVISD 140
WRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPALKERNGSEVISD
Sbjct: 87 WRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPALKERNGSEVISD 146
Query: 141 FSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKKQRDDATEVSGKLRLIKGSLL 200
FSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKKQRDDATEVSGKLRLIKGSLL
Sbjct: 147 FSLGKAERNPSSYSCSHEKKFNRKHIKCPFPKTLNQSGKKQRDDATEVSGKLRLIKGSLL 206
Query: 201 DLQAL 205
DLQAL
Sbjct: 207 DLQAL 211
>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 37.0 bits (84), Expect = 0.012
Identities = 41/132 (31%), Positives = 49/132 (37%), Gaps = 17/132 (12%)
Query: 10 RRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGRE 69
RR+R RRRR + G R G R APG G G LE G R G
Sbjct: 93 RRQRLRRRRAKVG--------GWGCARARGLDRRAPGEGGRSPGGGLEPSPGARGAVGAA 144
Query: 70 EGSV-FRKGEGTWRRR-----RLLAAADP---RASPCLPVRGILSLTLLPARQLPPSWRK 120
+ RK G RR R+L P RA RG+ LP R
Sbjct: 145 PAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGATGGRGLPGRRGLPGRSGLQGAAV 204
Query: 121 TTPVLIPALKER 132
PV +P+L+ R
Sbjct: 205 PPPVGVPSLRGR 216
>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 36.6 bits (83), Expect = 0.015
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 14 CRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREEGSV 73
CR G R G A+ + +P AAPG E G E+GVG + +E +
Sbjct: 22 CRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVG---VSASDEAGI 78
Query: 74 FRKGEGTWRRR 84
+ +G +WR+R
Sbjct: 79 WMQGH-SWRQR 88
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 35.8 bits (81), Expect = 0.026
Identities = 36/96 (37%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 8 KRRRRRCRRRRRREGEERKTGVPAAAAVRREG--EPRAAPGTGRYHE----AGTLESGVG 61
+RRRRR RRRR R +A+A RR G PR AP G + +SG G
Sbjct: 385 RRRRRRRRRRRSRS---------SASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSG 435
Query: 62 -GRTGTGREEGSVFRKGEGTWRRRRLLAAADPRASP 96
G G G E GS +G G +R PRA P
Sbjct: 436 RGAPGPGPEPGS--ERGHGGHGKR--AKERPPRARP 467
>gi|239509017 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 90
Score = 34.7 bits (78), Expect = 0.058
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 3 RREESKRRRRRCRRRRRREGEERK 26
RR +RRRRR RRRRRR EE+K
Sbjct: 48 RRRRRRRRRRRRRRRRRRRREEKK 71
Score = 33.1 bits (74), Expect = 0.17
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 3 RREESKRRRRRCRRRRRREGEERK 26
RR +RRRRR RRRRRR E++K
Sbjct: 49 RRRRRRRRRRRRRRRRRRREEKKK 72
Score = 32.7 bits (73), Expect = 0.22
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGE 40
RR +RRRRR RRRRRR R+ RRE E
Sbjct: 45 RRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEE 82
Score = 31.2 bits (69), Expect = 0.64
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRA 43
RR +RRRRR RRRRRR R+ +R E A
Sbjct: 44 RRRRRRRRRRRRRRRRRRRRRRRREEKKKQKKKKRREEEEA 84
Score = 28.9 bits (63), Expect = 3.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 7 SKRRRRRCRRRRRREGEERK 26
S+RRRRR RRRRRR R+
Sbjct: 43 SRRRRRRRRRRRRRRRRRRR 62
Score = 28.1 bits (61), Expect = 5.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 7 SKRRRRRCRRRRRREGEERK 26
S RRRRR RRRRRR R+
Sbjct: 42 SSRRRRRRRRRRRRRRRRRR 61
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 33.9 bits (76), Expect = 0.099
Identities = 51/210 (24%), Positives = 79/210 (37%), Gaps = 37/210 (17%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGG 62
RR+E++RR RRRR +E E R+ RE E + G E G GG
Sbjct: 318 RRDEARRRELEARRRREQEEELRRL---------REQEKEEKERRRERADRGEAERGSGG 368
Query: 63 RTG---------------TGREEG---SVFRKGEGTWRRRRLLAAADPRASPCLPVRGIL 104
+G GR G S + E R +A P++S P R
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPAR--- 425
Query: 105 SLTLLPARQLPPSWRKTTPVLIPALKERNGSEVISDFSLGKAERNPSSYSCSHEKKFNRK 164
R P ++ PV + ++R SE S + ++ PS E+K +
Sbjct: 426 KPGQKEKRVRPEEKQQAKPVKVERTRKR--SEGFSMDRKVEKKKEPSV-----EEKLQKL 478
Query: 165 HIKCPFPKTLNQSGKKQRDDATEVSGKLRL 194
H + F ++ K+ +A E G L++
Sbjct: 479 HSEIKFALKVDSPDVKRCLNALEELGTLQV 508
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 33.9 bits (76), Expect = 0.099
Identities = 51/210 (24%), Positives = 79/210 (37%), Gaps = 37/210 (17%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGG 62
RR+E++RR RRRR +E E R+ RE E + G E G GG
Sbjct: 318 RRDEARRRELEARRRREQEEELRRL---------REQEKEEKERRRERADRGEAERGSGG 368
Query: 63 RTG---------------TGREEG---SVFRKGEGTWRRRRLLAAADPRASPCLPVRGIL 104
+G GR G S + E R +A P++S P R
Sbjct: 369 SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPAR--- 425
Query: 105 SLTLLPARQLPPSWRKTTPVLIPALKERNGSEVISDFSLGKAERNPSSYSCSHEKKFNRK 164
R P ++ PV + ++R SE S + ++ PS E+K +
Sbjct: 426 KPGQKEKRVRPEEKQQAKPVKVERTRKR--SEGFSMDRKVEKKKEPSV-----EEKLQKL 478
Query: 165 HIKCPFPKTLNQSGKKQRDDATEVSGKLRL 194
H + F ++ K+ +A E G L++
Sbjct: 479 HSEIKFALKVDSPDVKRCLNALEELGTLQV 508
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 33.5 bits (75), Expect = 0.13
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 5 EESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGT------GRYHEAGTLES 58
EE K R R R RR G + G A+ G+ GT GR E G
Sbjct: 118 EEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPSGRGTERGRRGR 177
Query: 59 GVGGRTGTGREEGSVFRKGEGTW 81
G GR G+GR G +G GT+
Sbjct: 178 G-RGRGGSGRRGGRFSAQGMGTF 199
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 33.5 bits (75), Expect = 0.13
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 5 EESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGT------GRYHEAGTLES 58
EE K R R R RR G + G A+ G+ GT GR E G
Sbjct: 118 EEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPSGRGTERGRRGR 177
Query: 59 GVGGRTGTGREEGSVFRKGEGTW 81
G GR G+GR G +G GT+
Sbjct: 178 G-RGRGGSGRRGGRFSAQGMGTF 199
>gi|239757813 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 33.1 bits (74), Expect = 0.17
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 8 KRRRRRCRRRRRREGEERKTGVPAA-AAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGT 66
+ R RRRR+R G+ PAA AA+ G RA + ++ GVG
Sbjct: 20 RNRATAQRRRRKRPGDP-----PAACAAIAVMGASRA--------QCPRVQVGVGSHAAA 66
Query: 67 GREEGSVFRKGEGTWRRRRLLAAADPRASPCLP 99
R G + RK WRR R + DP S LP
Sbjct: 67 KRWLGKLRRKRR--WRRAREAGSRDPLPSAPLP 97
>gi|239757528 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 9 RRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGR 68
R RRRC + R G+P A + +EG RAA G H G GG GR
Sbjct: 291 RVRRRCHQSR---------GLPRTAQLLQEGGKRAALADGGAH-------GSGGHRSAGR 334
Query: 69 EEGSVFR 75
+E V R
Sbjct: 335 QEDGVGR 341
>gi|89060771 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 33.1 bits (74), Expect = 0.17
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 8 KRRRRRCRRRRRREGEERKTGVPAA-AAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGT 66
+ R RRRR+R G+ PAA AA+ G RA + ++ GVG
Sbjct: 20 RNRATAQRRRRKRPGDP-----PAACAAIAVMGASRA--------QCPRVQVGVGSHAAA 66
Query: 67 GREEGSVFRKGEGTWRRRRLLAAADPRASPCLP 99
R G + RK WRR R + DP S LP
Sbjct: 67 KRWLGKLRRKRR--WRRAREAGSRDPLPSAPLP 97
>gi|239752044 PREDICTED: hypothetical protein XP_002348074 [Homo
sapiens]
Length = 352
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 9 RRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGR 68
R RRRC + R G+P A + +EG RAA G H G GG GR
Sbjct: 291 RVRRRCHQSR---------GLPRTAQLLQEGGKRAALADGGAH-------GSGGHRSAGR 334
Query: 69 EEGSVFR 75
+E V R
Sbjct: 335 QEDGVGR 341
>gi|51477177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 33.1 bits (74), Expect = 0.17
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 8 KRRRRRCRRRRRREGEERKTGVPAA-AAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGT 66
+ R RRRR+R G+ PAA AA+ G RA + ++ GVG
Sbjct: 20 RNRATAQRRRRKRPGDP-----PAACAAIAVMGASRA--------QCPRVQVGVGSHAAA 66
Query: 67 GREEGSVFRKGEGTWRRRRLLAAADPRASPCLP 99
R G + RK WRR R + DP S LP
Sbjct: 67 KRWLGKLRRKRR--WRRAREAGSRDPLPSAPLP 97
>gi|239746528 PREDICTED: hypothetical protein XP_002343752 [Homo
sapiens]
Length = 352
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
Query: 9 RRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGR 68
R RRRC + R G+P A + +EG RAA G H G GG GR
Sbjct: 291 RVRRRCHQSR---------GLPRTAQLLQEGGKRAALADGGAH-------GSGGHRSAGR 334
Query: 69 EEGSVFR 75
+E V R
Sbjct: 335 QEDGVGR 341
>gi|110611239 alpha-L-iduronidase precursor [Homo sapiens]
Length = 653
Score = 32.7 bits (73), Expect = 0.22
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 32 AAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREEGS-VFRKGEGTWRRRRLLAAA 90
A +R G P PG G + L++G+ G R G VF E + RR+ AA
Sbjct: 455 AVTLRLRGVP---PGPGLVYVTRYLDNGLCSPDGEWRRLGRPVFPTAE---QFRRMRAAE 508
Query: 91 DPRASPCLPVRGILSLTLLPARQLP 115
DP A+ P+ LTL PA +LP
Sbjct: 509 DPVAAAPRPLPAGGRLTLRPALRLP 533
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 32.7 bits (73), Expect = 0.22
Identities = 38/135 (28%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 10 RRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGRE 69
R R CRRRRRR G G A P + PG E G
Sbjct: 336 RCRFCRRRRRRGGGGEGEGTHATHG------PASPPGRRHDEEVG--------------- 374
Query: 70 EGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPAL 129
+V R G G RR L PR V G L R L +W TT P
Sbjct: 375 -AAVLRAGSGEGSRRGLQLTPPPRR-----VHGALQ-RFGGGRNLKSNWMSTTRT--PRR 425
Query: 130 KERNGSEVISDFSLG 144
+G ++++D + G
Sbjct: 426 SGASGPKMVADQTSG 440
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 32.7 bits (73), Expect = 0.22
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 24/103 (23%)
Query: 17 RRRREGEERKT------------GVPAA-AAVRREGEPRAA-------PGTGRYHEAGTL 56
RRRR GEER+ +PA AA R GE RAA G G G
Sbjct: 247 RRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 306
Query: 57 ESGV-GGRTGTGREEGSVFRKGEGTWR---RRRLLAAADPRAS 95
GV GG T R + R TW+ R + AA PR S
Sbjct: 307 GEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLS 349
>gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo
sapiens]
Length = 190
Score = 32.7 bits (73), Expect = 0.22
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 27 TGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREEGSVFRKGEG---TWR- 82
+G P ++ + R+G+ R A GR AG +SG G GT G G WR
Sbjct: 5 SGRPFSSLLLRQGDYRGATWLGRGGGAGPGQSGPGHGQGTATSWARTGESGAGPSPAWRR 64
Query: 83 ------RRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRK 120
R R A + P SP P + + AR P R+
Sbjct: 65 CAGEASRGRQRARSGPPKSPRRPDAQLRAARTQRARAQTPQLRR 108
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.7 bits (73), Expect = 0.22
Identities = 38/135 (28%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 10 RRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGRE 69
R R CRRRRRR G G A P + PG E G
Sbjct: 316 RCRFCRRRRRRGGGGEGEGTHATHG------PASPPGRRHDEEVG--------------- 354
Query: 70 EGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPAL 129
+V R G G RR L PR V G L R L +W TT P
Sbjct: 355 -AAVLRAGSGEGSRRGLQLTPPPRR-----VHGALQ-RFGGGRNLKSNWMSTTRT--PRR 405
Query: 130 KERNGSEVISDFSLG 144
+G ++++D + G
Sbjct: 406 SGASGPKMVADQTSG 420
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.7 bits (73), Expect = 0.22
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 24/103 (23%)
Query: 17 RRRREGEERKT------------GVPAA-AAVRREGEPRAA-------PGTGRYHEAGTL 56
RRRR GEER+ +PA AA R GE RAA G G G
Sbjct: 341 RRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 400
Query: 57 ESGV-GGRTGTGREEGSVFRKGEGTWR---RRRLLAAADPRAS 95
GV GG T R + R TW+ R + AA PR S
Sbjct: 401 GEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLS 443
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.7 bits (73), Expect = 0.22
Identities = 38/135 (28%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 10 RRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGRE 69
R R CRRRRRR G G A P + PG E G
Sbjct: 316 RCRFCRRRRRRGGGGEGEGTHATHG------PASPPGRRHDEEVG--------------- 354
Query: 70 EGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPAL 129
+V R G G RR L PR V G L R L +W TT P
Sbjct: 355 -AAVLRAGSGEGSRRGLQLTPPPRR-----VHGALQ-RFGGGRNLKSNWMSTTRT--PRR 405
Query: 130 KERNGSEVISDFSLG 144
+G ++++D + G
Sbjct: 406 SGASGPKMVADQTSG 420
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.7 bits (73), Expect = 0.22
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 24/103 (23%)
Query: 17 RRRREGEERKT------------GVPAA-AAVRREGEPRAA-------PGTGRYHEAGTL 56
RRRR GEER+ +PA AA R GE RAA G G G
Sbjct: 341 RRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQ 400
Query: 57 ESGV-GGRTGTGREEGSVFRKGEGTWR---RRRLLAAADPRAS 95
GV GG T R + R TW+ R + AA PR S
Sbjct: 401 GEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRLS 443
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 32.7 bits (73), Expect = 0.22
Identities = 38/135 (28%), Positives = 47/135 (34%), Gaps = 30/135 (22%)
Query: 10 RRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGRE 69
R R CRRRRRR G G A P + PG E G
Sbjct: 316 RCRFCRRRRRRGGGGEGEGTHATHG------PASPPGRRHDEEVG--------------- 354
Query: 70 EGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPAL 129
+V R G G RR L PR V G L R L +W TT P
Sbjct: 355 -AAVLRAGSGEGSRRGLQLTPPPRR-----VHGALQ-RFGGGRNLKSNWMSTTRT--PRR 405
Query: 130 KERNGSEVISDFSLG 144
+G ++++D + G
Sbjct: 406 SGASGPKMVADQTSG 420
>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b
[Homo sapiens]
Length = 1265
Score = 32.7 bits (73), Expect = 0.22
Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 14/153 (9%)
Query: 5 EESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRT 64
+E +RR C RR +E VP +RR+ + +Y + L +
Sbjct: 730 QEPAKRRSECEEAPRRRSDEHSKKVPPDGLLRRKSDDVHLRKKRKYEKPQELSGRKRLKP 789
Query: 65 GTGREEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRK---- 120
G +E +FRK +W+ A D A P+R + PP R+
Sbjct: 790 G---KEDKLFRKKRRSWKN-----AEDRMALANKPLRRFKQEPEDELPEAPPKTRESDHS 841
Query: 121 --TTPVLIPALKERNGSEVISDFSLGKAERNPS 151
++P P+ + G E + + R P+
Sbjct: 842 RSSSPTAGPSTEGAEGPEEKKKVKMRRKRRLPN 874
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 32.7 bits (73), Expect = 0.22
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 19/83 (22%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGG 62
R +E +RRRRR R RR + EE + +R G +P ++H
Sbjct: 40 REDEGRRRRRRRSRERRSDSEEERW--------QRSGMRSRSPPRPKWH----------S 81
Query: 63 RTGTGREEGSVFRKGEGTWRRRR 85
R G+ + + S + G W RRR
Sbjct: 82 RDGSSQSD-SGEEQSRGQWARRR 103
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 32.7 bits (73), Expect = 0.22
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 19/83 (22%)
Query: 3 RREESKRRRRRCRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGG 62
R +E +RRRRR R RR + EE + +R G +P ++H
Sbjct: 40 REDEGRRRRRRRSRERRSDSEEERW--------QRSGMRSRSPPRPKWH----------S 81
Query: 63 RTGTGREEGSVFRKGEGTWRRRR 85
R G+ + + S + G W RRR
Sbjct: 82 RDGSSQSD-SGEEQSRGQWARRR 103
>gi|239756672 PREDICTED: hypothetical protein LOC146429 [Homo
sapiens]
Length = 495
Score = 32.3 bits (72), Expect = 0.29
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 69 EEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPA 128
+E V R G R RRLLA+A PC+ + +LS L Q P R +L PA
Sbjct: 3 QEARVLRAAGGFGRARRLLASAS--WVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPA 60
Query: 129 LKERNGSEVI 138
L+ G ++
Sbjct: 61 LRALRGPALL 70
>gi|239751156 PREDICTED: hypothetical protein LOC146429 isoform 6
[Homo sapiens]
Length = 560
Score = 32.3 bits (72), Expect = 0.29
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 69 EEGSVFRKGEGTWRRRRLLAAADPRASPCLPVRGILSLTLLPARQLPPSWRKTTPVLIPA 128
+E V R G R RRLLA+A PC+ + +LS L Q P R +L PA
Sbjct: 3 QEARVLRAAGGFGRARRLLASAS--WVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPA 60
Query: 129 LKERNGSEVI 138
L+ G ++
Sbjct: 61 LRALRGPALL 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,112,892
Number of Sequences: 37866
Number of extensions: 489155
Number of successful extensions: 3546
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 3023
Number of HSP's gapped (non-prelim): 511
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.